Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0708080 | XP_039685159.1 | 90.881 | 647 | 45 | 6 | 1 | 646 | 1 | 634 | 0.0 | 1157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0708080 | sp|A7XN92|CFM3_MAIZE | 41.774 | 541 | 268 | 8 | 118 | 615 | 168 | 704 | 7.72e-133 | 413 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0708080 | G7L9R0 | 90.881 | 647 | 45 | 6 | 1 | 646 | 1 | 634 | 0.0 | 1157 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032370 | Msa0708080 | 0.800658 | 1.299695e-48 | -8.615850e-47 |
| Msa0094010 | Msa0708080 | 0.800900 | 1.160074e-48 | -8.615850e-47 |
| Msa0638690 | Msa0708080 | 0.809762 | 1.612322e-50 | -8.615850e-47 |
| Msa0708080 | Msa0784620 | 0.808868 | 2.507134e-50 | -8.615850e-47 |
| Msa0708080 | Msa0824730 | 0.814354 | 1.608313e-51 | -8.615850e-47 |
| Msa0708080 | Msa0866120 | 0.807369 | 5.226629e-50 | -8.615850e-47 |
| Msa0708080 | Msa0881480 | 0.805001 | 1.648047e-49 | -8.615850e-47 |
| Msa0708080 | Msa1015060 | 0.812406 | 4.307429e-51 | -8.615850e-47 |
| Msa0708080 | Msa1123550 | 0.803873 | 2.832445e-49 | -8.615850e-47 |
| Msa0708080 | Msa1221900 | 0.828929 | 6.839189e-55 | -8.615850e-47 |
| Msa0708080 | Msa1235630 | 0.800777 | 1.229236e-48 | -8.615850e-47 |
| Msa0708080 | Msa1237030 | 0.813308 | 2.732976e-51 | -8.615850e-47 |
| Msa0708080 | Msa1265070 | 0.835303 | 1.814745e-56 | -8.615850e-47 |
| Msa0708080 | Msa1337730 | 0.849531 | 3.045363e-60 | -8.615850e-47 |
| Msa0708080 | Msa1390310 | 0.817283 | 3.573408e-52 | -8.615850e-47 |
| Msa0708080 | Msa1398860 | 0.802515 | 5.409738e-49 | -8.615850e-47 |
| Msa0708080 | Msa1456650 | 0.817804 | 2.726309e-52 | -8.615850e-47 |
| Msa0172350 | Msa0708080 | 0.829716 | 4.404626e-55 | -8.615850e-47 |
| Msa0181520 | Msa0708080 | 0.807692 | 4.463855e-50 | -8.615850e-47 |
| Msa0222920 | Msa0708080 | 0.827631 | 1.406411e-54 | -8.615850e-47 |
| Msa0429520 | Msa0708080 | -0.801950 | 7.068083e-49 | -8.615850e-47 |
| Msa0267760 | Msa0708080 | 0.826346 | 2.853062e-54 | -8.615850e-47 |
| Msa0302450 | Msa0708080 | 0.810186 | 1.306375e-50 | -8.615850e-47 |
| Msa0521310 | Msa0708080 | 0.813867 | 2.059040e-51 | -8.615850e-47 |
| Msa0526710 | Msa0708080 | 0.827883 | 1.223430e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0708080 | MtrunA17_Chr8g0391141 | 90.881 | 647 | 45 | 6 | 1 | 646 | 1 | 634 | 0.0 | 1157 |
| Msa0708080 | MtrunA17_Chr6g0484411 | 53.929 | 649 | 215 | 11 | 45 | 615 | 99 | 741 | 0.0 | 650 |
| Msa0708080 | MtrunA17_Chr1g0187011 | 42.382 | 571 | 269 | 10 | 96 | 615 | 189 | 750 | 7.49e-138 | 423 |
| Msa0708080 | MtrunA17_Chr4g0071101 | 40.500 | 600 | 302 | 9 | 59 | 615 | 123 | 710 | 1.06e-128 | 397 |
| Msa0708080 | MtrunA17_Chr6g0451621 | 39.779 | 543 | 267 | 7 | 118 | 615 | 150 | 677 | 5.85e-123 | 389 |
| Msa0708080 | MtrunA17_Chr2g0330811 | 39.189 | 592 | 303 | 7 | 76 | 612 | 125 | 714 | 2.52e-122 | 380 |
| Msa0708080 | MtrunA17_Chr8g0366041 | 34.842 | 221 | 114 | 3 | 130 | 320 | 1 | 221 | 3.65e-38 | 140 |
| Msa0708080 | MtrunA17_Chr4g0033621 | 35.659 | 129 | 80 | 1 | 487 | 615 | 165 | 290 | 1.23e-13 | 73.6 |
| Msa0708080 | MtrunA17_Chr4g0067911 | 32.164 | 171 | 101 | 4 | 475 | 633 | 178 | 345 | 3.35e-13 | 71.6 |
| Msa0708080 | MtrunA17_Chr8g0391361 | 32.867 | 143 | 85 | 4 | 475 | 615 | 24 | 157 | 1.02e-11 | 63.9 |
| Msa0708080 | MtrunA17_Chr1g0171521 | 33.333 | 99 | 63 | 1 | 493 | 591 | 156 | 251 | 3.11e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0708080 | AT3G18390.1 | 50.850 | 647 | 231 | 11 | 51 | 615 | 132 | 773 | 0.0 | 619 |
| Msa0708080 | AT3G01370.1 | 40.675 | 563 | 277 | 10 | 100 | 615 | 147 | 699 | 1.94e-129 | 406 |
| Msa0708080 | AT4G29750.2 | 41.959 | 541 | 278 | 9 | 107 | 615 | 231 | 767 | 6.08e-127 | 394 |
| Msa0708080 | AT4G29750.1 | 41.959 | 541 | 278 | 9 | 107 | 615 | 231 | 767 | 6.98e-127 | 395 |
| Msa0708080 | AT4G14510.1 | 38.793 | 580 | 280 | 9 | 107 | 615 | 210 | 785 | 3.28e-122 | 385 |
| Msa0708080 | AT3G23070.1 | 40.331 | 605 | 286 | 9 | 76 | 614 | 162 | 757 | 7.84e-122 | 383 |
| Msa0708080 | AT5G16180.1 | 39.591 | 538 | 280 | 11 | 93 | 612 | 180 | 690 | 1.76e-111 | 351 |
| Msa0708080 | AT5G16180.2 | 38.083 | 386 | 199 | 8 | 93 | 461 | 180 | 542 | 6.34e-73 | 245 |
| Msa0708080 | AT2G28480.1 | 36.434 | 129 | 79 | 1 | 487 | 615 | 156 | 281 | 6.46e-14 | 74.3 |
| Msa0708080 | AT3G25440.4 | 33.333 | 117 | 73 | 2 | 493 | 607 | 20 | 133 | 1.11e-11 | 66.6 |
| Msa0708080 | AT3G25440.3 | 33.333 | 117 | 73 | 2 | 493 | 607 | 20 | 133 | 1.11e-11 | 66.6 |
| Msa0708080 | AT3G25440.5 | 33.333 | 117 | 73 | 2 | 493 | 607 | 20 | 133 | 1.11e-11 | 66.6 |
| Msa0708080 | AT3G25440.2 | 33.333 | 117 | 73 | 2 | 493 | 607 | 111 | 224 | 2.21e-11 | 66.6 |
| Msa0708080 | AT3G25440.1 | 33.333 | 117 | 73 | 2 | 493 | 607 | 175 | 288 | 2.52e-11 | 66.6 |
| Msa0708080 | AT4G13070.1 | 34.074 | 135 | 76 | 5 | 476 | 605 | 164 | 290 | 5.57e-11 | 65.1 |
Find 162 sgRNAs with CRISPR-Local
Find 451 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACTGGAGGATTAGTTATT+TGG | 0.188677 | 4_4:-81527463 | Msa0708080:CDS |
| TCAGTTCATTGTTTGTATTC+TGG | 0.195145 | 4_4:+81526898 | None:intergenic |
| GAACGCGTGAGGCCAGATTT+AGG | 0.241909 | 4_4:+81529432 | None:intergenic |
| CTCCTGTCTTTCAGATAAAA+TGG | 0.242553 | 4_4:+81524695 | None:intergenic |
| TTTCATAAGCCTAACATTCT+TGG | 0.250063 | 4_4:+81524524 | None:intergenic |
| GCAAAGTCTGAATTTGAATT+TGG | 0.252842 | 4_4:+81529812 | None:intergenic |
| ACCGAATCCTTCTCCGATTC+CGG | 0.279470 | 4_4:-81529692 | Msa0708080:CDS |
| AGCTAAAATTGATTCATCTA+TGG | 0.284238 | 4_4:-81523779 | Msa0708080:CDS |
| TTCTTCGTTGTAATTAGATT+TGG | 0.320966 | 4_4:+81529749 | None:intergenic |
| TCTCTGGTCCAGAAATTAAC+AGG | 0.328504 | 4_4:-81524795 | Msa0708080:intron |
| ATTGTTTCCCTCCTATTATC+AGG | 0.341141 | 4_4:+81523745 | None:intergenic |
| AACCGGATGCTTGATGATTT+CGG | 0.342448 | 4_4:-81527284 | Msa0708080:CDS |
| GGATTAGTTATTTGGAGGTC+AGG | 0.351914 | 4_4:-81527455 | Msa0708080:CDS |
| TCAAGTTGGTTCCCATTTGT+TGG | 0.379092 | 4_4:+81527392 | None:intergenic |
| AACGCGTGAGGCCAGATTTA+GGG | 0.379606 | 4_4:+81529433 | None:intergenic |
| CTGCTGAAGCCAAGAATGTT+AGG | 0.380686 | 4_4:-81524533 | Msa0708080:CDS |
| GGAAGTAACGGCGCATTGTT+TGG | 0.381950 | 4_4:-81529517 | Msa0708080:CDS |
| TTCCAGCTGGTCCTGATAAT+AGG | 0.393301 | 4_4:-81523756 | Msa0708080:CDS |
| TGCAGAGCTGTTGATGTATC+CGG | 0.401549 | 4_4:-81524663 | Msa0708080:CDS |
| TAAGCTGTGGGAGAAAAGTT+TGG | 0.402199 | 4_4:-81526949 | Msa0708080:CDS |
| TCATGGTAGCGGTACATAGA+TGG | 0.406272 | 4_4:-81529913 | None:intergenic |
| TCCTCTGGCGTCATGTTCTC+AGG | 0.408691 | 4_4:+81527317 | None:intergenic |
| CATTGGTATTCCACTGATGA+TGG | 0.411742 | 4_4:+81529394 | None:intergenic |
| TCCGGAATCGGAGAAGGATT+CGG | 0.415679 | 4_4:+81529691 | None:intergenic |
| CGGTTGAACTCTGCCTCCTC+TGG | 0.416559 | 4_4:+81527302 | None:intergenic |
| TTCCTATGTCGTAGAGTAAT+GGG | 0.418274 | 4_4:+81523365 | None:intergenic |
| AGTTATCAAGGGCCAACAAA+TGG | 0.419942 | 4_4:-81527404 | Msa0708080:CDS |
| TTTGAGCTTCACCAACTCAT+TGG | 0.424032 | 4_4:+81529377 | None:intergenic |
| AAAATCAGTATCCCTAAATC+TGG | 0.424310 | 4_4:-81529444 | Msa0708080:CDS |
| ACCCCACCAGTCAACAAAAC+GGG | 0.432008 | 4_4:+81527259 | None:intergenic |
| AGATTTGTACAGCGGCGAAC+TGG | 0.432282 | 4_4:-81527479 | Msa0708080:intron |
| AGTTATTTGGAAGTAGGGTT+CGG | 0.435827 | 4_4:+81529637 | None:intergenic |
| GATCAGATAATTTCCGGAAT+CGG | 0.436575 | 4_4:+81529679 | None:intergenic |
| TTTGTTGACTGGTGGGGTAC+AGG | 0.445760 | 4_4:-81527254 | Msa0708080:CDS |
| TGAAACCTCGTGTCGTTGAA+TGG | 0.448637 | 4_4:+81523304 | None:intergenic |
| TAGATAAGAGAGAATCCTTT+GGG | 0.448665 | 4_4:+81523413 | None:intergenic |
| CACCTCCCTTTGATTCAAGT+TGG | 0.449124 | 4_4:+81527378 | None:intergenic |
| CCTAAGCGGAGTTCTGTAAC+CGG | 0.453391 | 4_4:+81527190 | None:intergenic |
| CTGAGTCAATTGCGAGCAAT+GGG | 0.453466 | 4_4:-81529483 | Msa0708080:CDS |
| GCAAAATTGAGTGGGTCCTT+CGG | 0.453847 | 4_4:+81529837 | None:intergenic |
| GTAGATAAGAGAGAATCCTT+TGG | 0.455842 | 4_4:+81523412 | None:intergenic |
| AATGATGGGTGTCCTCTAGA+AGG | 0.457293 | 4_4:-81523094 | Msa0708080:exon |
| ATATTTATTCCTTAGCAGTA+AGG | 0.457865 | 4_4:+81524767 | None:intergenic |
| ATGATACGAAAGACAACGAT+TGG | 0.457942 | 4_4:-81523148 | Msa0708080:CDS |
| CAGAGGAGGCAGAGTTCAAC+CGG | 0.459230 | 4_4:-81527301 | Msa0708080:CDS |
| GGGAGCAAATCAGCATCAAC+GGG | 0.465015 | 4_4:+81527224 | None:intergenic |
| TAGAGTGAAGGTGAAGAATC+TGG | 0.472805 | 4_4:-81523191 | Msa0708080:CDS |
| AAACAATGAACTGATGGCTC+TGG | 0.476924 | 4_4:-81526889 | Msa0708080:CDS |
| GTCGGTTATTCCGTCGGAGA+AGG | 0.477309 | 4_4:-81529583 | Msa0708080:CDS |
| GGGAGAAATAGAAATCTTCA+AGG | 0.487715 | 4_4:-81526990 | Msa0708080:CDS |
| AAAATGACAAGGAAGAGCTT+TGG | 0.488179 | 4_4:+81527103 | None:intergenic |
| TATCGTGGTAAGAGTTATCA+AGG | 0.491776 | 4_4:-81527416 | Msa0708080:CDS |
| AAGTAGATACTTACAACAGC+TGG | 0.492996 | 4_4:+81524486 | None:intergenic |
| TACCCCACCAGTCAACAAAA+CGG | 0.493167 | 4_4:+81527258 | None:intergenic |
| CCGGTTACAGAACTCCGCTT+AGG | 0.493287 | 4_4:-81527190 | Msa0708080:CDS |
| GCAGAGCTGTTGATGTATCC+GGG | 0.495071 | 4_4:-81524662 | Msa0708080:CDS |
| TTCGGTGATGAAGAGATCAT+TGG | 0.495117 | 4_4:+81529855 | None:intergenic |
| CTGGAGGATTAGTTATTTGG+AGG | 0.496458 | 4_4:-81527460 | Msa0708080:CDS |
| GTTATCAAGGGCCAACAAAT+GGG | 0.497058 | 4_4:-81527403 | Msa0708080:CDS |
| AAAATGGCAGCCACACTGCT+TGG | 0.498192 | 4_4:+81524711 | None:intergenic |
| TTCTGTAACCGGGAATCGTA+GGG | 0.498551 | 4_4:+81527201 | None:intergenic |
| TGCAGATGTTTCATCTTCCC+CGG | 0.498776 | 4_4:+81524644 | None:intergenic |
| GGAGGTCAGGAAGTGTTATG+TGG | 0.504618 | 4_4:-81527442 | Msa0708080:CDS |
| AACTTTCAGACACAAAATGA+TGG | 0.504642 | 4_4:-81523109 | Msa0708080:exon |
| GTTCTGTAACCGGGAATCGT+AGG | 0.507983 | 4_4:+81527200 | None:intergenic |
| CTCCTATTATCAGGACCAGC+TGG | 0.508839 | 4_4:+81523754 | None:intergenic |
| ATCTGCACGAGCAGGATCAA+TGG | 0.509762 | 4_4:-81524628 | Msa0708080:CDS |
| GTTCCTATGTCGTAGAGTAA+TGG | 0.511294 | 4_4:+81523364 | None:intergenic |
| ACTGAGTCAATTGCGAGCAA+TGG | 0.514553 | 4_4:-81529484 | Msa0708080:CDS |
| TATTCCGTCGGAGAAGGAGG+TGG | 0.514907 | 4_4:-81529577 | Msa0708080:CDS |
| CTTAGCAAGAACATGAAGTA+AGG | 0.516971 | 4_4:+81529883 | None:intergenic |
| CGGTCGATGGCGTTGGATGG+TGG | 0.517318 | 4_4:+81529711 | None:intergenic |
| TGGGAACCAACTTGAATCAA+AGG | 0.517562 | 4_4:-81527384 | Msa0708080:CDS |
| GACCGAAATCATCAAGCATC+CGG | 0.520102 | 4_4:+81527282 | None:intergenic |
| GGGAACCAACTTGAATCAAA+GGG | 0.522354 | 4_4:-81527383 | Msa0708080:CDS |
| AAGGATTCGGTCGATGGCGT+TGG | 0.523487 | 4_4:+81529704 | None:intergenic |
| AGGCTCAAGCACTCTGTGGA+AGG | 0.524802 | 4_4:-81524593 | Msa0708080:CDS |
| GGGGAGCAAATCAGCATCAA+CGG | 0.527260 | 4_4:+81527223 | None:intergenic |
| GATGAAACATCTGCACGAGC+AGG | 0.529908 | 4_4:-81524636 | Msa0708080:CDS |
| AAATAGAAATCTTCAAGGCC+TGG | 0.532543 | 4_4:-81526985 | Msa0708080:CDS |
| GCAAAGATTGCTGTCAAGCT+TGG | 0.535483 | 4_4:-81526924 | Msa0708080:CDS |
| CGTGTTATGTTCCGTGTGGT+TGG | 0.536863 | 4_4:-81523709 | Msa0708080:CDS |
| TGTTCCACCTCCTTCTCCGA+CGG | 0.537860 | 4_4:+81529573 | None:intergenic |
| TTGAGAATATGCATTTGCAC+TGG | 0.538204 | 4_4:-81523553 | Msa0708080:CDS |
| GAGGTCAGGAAGTGTTATGT+GGG | 0.539555 | 4_4:-81527441 | Msa0708080:CDS |
| TTTGGAAGTAGGGTTCGGAT+TGG | 0.543238 | 4_4:+81529642 | None:intergenic |
| CTGAAGGTGTACTTGCAACT+TGG | 0.544365 | 4_4:-81523679 | Msa0708080:intron |
| TCGGAGAAGGATTCGGTCGA+TGG | 0.544605 | 4_4:+81529698 | None:intergenic |
| GAAGAAGAAGAAGGAAGTAA+CGG | 0.544610 | 4_4:-81529529 | Msa0708080:CDS |
| ATTCGGTCGATGGCGTTGGA+TGG | 0.547783 | 4_4:+81529708 | None:intergenic |
| GATTCATCTATGGTTCCAGC+TGG | 0.549966 | 4_4:-81523769 | Msa0708080:CDS |
| GAATACAAACAATGAACTGA+TGG | 0.554458 | 4_4:-81526895 | Msa0708080:CDS |
| GGTTATTCCGTCGGAGAAGG+AGG | 0.557710 | 4_4:-81529580 | Msa0708080:CDS |
| CAGCTGGTCCTGATAATAGG+AGG | 0.559286 | 4_4:-81523753 | Msa0708080:CDS |
| ATAATTTCCGGAATCGGAGA+AGG | 0.561594 | 4_4:+81529685 | None:intergenic |
| TGATACGAAAGACAACGATT+GGG | 0.565816 | 4_4:-81523147 | Msa0708080:CDS |
| CAGGAGGTACCTTACTGCTA+AGG | 0.572140 | 4_4:-81524776 | Msa0708080:CDS |
| TGATAATCTGTAGATACACT+TGG | 0.574097 | 4_4:-81523593 | Msa0708080:intron |
| GCTTAAGAATAGCACATGCC+AGG | 0.574436 | 4_4:+81526967 | None:intergenic |
| GAATCTGGTGGTAACGGTGG+TGG | 0.574612 | 4_4:-81523176 | Msa0708080:CDS |
| GGCTCAAGCACTCTGTGGAA+GGG | 0.574749 | 4_4:-81524592 | Msa0708080:CDS |
| CTGTAACCGGGAATCGTAGG+GGG | 0.577540 | 4_4:+81527203 | None:intergenic |
| CATGTGCTATTCTTAAGCTG+TGG | 0.577861 | 4_4:-81526962 | Msa0708080:CDS |
| AGAATATGCATTTGCACTGG+AGG | 0.579416 | 4_4:-81523550 | Msa0708080:CDS |
| GTATTTGCGTAATAATGCCT+AGG | 0.579982 | 4_4:-81523062 | Msa0708080:three_prime_UTR |
| TACTTCAATCTGCCTTCTAG+AGG | 0.580468 | 4_4:+81523082 | None:intergenic |
| TCTTGCTCATCACATCGTGC+AGG | 0.583250 | 4_4:-81529325 | Msa0708080:intron |
| GGTCGGAGCGAATCCATTCA+CGG | 0.587245 | 4_4:+81529607 | None:intergenic |
| ATGGATTCGCTCCGACCAGT+CGG | 0.589791 | 4_4:-81529601 | Msa0708080:CDS |
| CTAAGCGGAGTTCTGTAACC+GGG | 0.590753 | 4_4:+81527191 | None:intergenic |
| TGTGGTTGGTTTAAGACTGA+AGG | 0.592144 | 4_4:-81523695 | Msa0708080:CDS |
| TCAGTGGAATACCAATGAGT+TGG | 0.592237 | 4_4:-81529388 | Msa0708080:CDS |
| GGCCCATTACTCTACGACAT+AGG | 0.592337 | 4_4:-81523367 | Msa0708080:CDS |
| ATGTGCTATTCTTAAGCTGT+GGG | 0.594289 | 4_4:-81526961 | Msa0708080:CDS |
| TGCTCATCGTTGGTAAGTCG+CGG | 0.596216 | 4_4:+81527146 | None:intergenic |
| AGTCGCGGATGCATTCTAGC+AGG | 0.599611 | 4_4:+81527161 | None:intergenic |
| ACTTTCAGACACAAAATGAT+GGG | 0.605702 | 4_4:-81523108 | Msa0708080:exon |
| AATGATCTCTTCATCACCGA+AGG | 0.609234 | 4_4:-81529853 | Msa0708080:CDS |
| TTCTCTCTTATCTACTATCG+TGG | 0.611701 | 4_4:-81523404 | Msa0708080:CDS |
| ACTGATGGCTCTGGAACTGA+AGG | 0.613173 | 4_4:-81526880 | Msa0708080:intron |
| AATTTGGCTGCAAAATTGAG+TGG | 0.613679 | 4_4:+81529828 | None:intergenic |
| CGACCAGTCGGTTATTCCGT+CGG | 0.615799 | 4_4:-81529589 | Msa0708080:CDS |
| TGAGAACATGACGCCAGAGG+AGG | 0.617733 | 4_4:-81527315 | Msa0708080:CDS |
| TTTGTACAGCGGCGAACTGG+AGG | 0.619300 | 4_4:-81527476 | Msa0708080:intron |
| TCTTATCTACTATCGTGGAA+AGG | 0.619509 | 4_4:-81523399 | Msa0708080:CDS |
| TCTCCGACGGAATAACCGAC+TGG | 0.622056 | 4_4:+81529586 | None:intergenic |
| TTTGAAGCACAGAACGCGTG+AGG | 0.622587 | 4_4:+81529421 | None:intergenic |
| GCTGGTTGTTTGTAGAGTGA+AGG | 0.623117 | 4_4:-81523203 | Msa0708080:intron |
| AGCAATGGGAATTCATCTGA+AGG | 0.623982 | 4_4:-81529469 | Msa0708080:CDS |
| TGCTTGAGCCTCATTGAACT+CGG | 0.625987 | 4_4:+81524605 | None:intergenic |
| AGCTGGTCCTGATAATAGGA+GGG | 0.626037 | 4_4:-81523752 | Msa0708080:CDS |
| GTTAACATAGATAAGAACCT+AGG | 0.626062 | 4_4:+81523045 | None:intergenic |
| AATAACCATTCAACGACACG+AGG | 0.630825 | 4_4:-81523309 | Msa0708080:intron |
| TCACCCAGGGCAAAATGACA+AGG | 0.635045 | 4_4:+81527092 | None:intergenic |
| GGTGAAGAATCTGGTGGTAA+CGG | 0.638051 | 4_4:-81523182 | Msa0708080:CDS |
| TTACTGGAATACAAGAGTGG+TGG | 0.644230 | 4_4:-81523461 | Msa0708080:CDS |
| TGTAACCGGGAATCGTAGGG+GGG | 0.646898 | 4_4:+81527204 | None:intergenic |
| AATGAGGCTCAAGCACTCTG+TGG | 0.647746 | 4_4:-81524597 | Msa0708080:CDS |
| TTCAAAGAATCCATCATCAG+TGG | 0.652459 | 4_4:-81529404 | Msa0708080:CDS |
| ATTTGGCTGCAAAATTGAGT+GGG | 0.652470 | 4_4:+81529829 | None:intergenic |
| TACACACCTAGTCATGGTAG+CGG | 0.656108 | 4_4:-81529924 | None:intergenic |
| CGACGGAATAACCGACTGGT+CGG | 0.658515 | 4_4:+81529590 | None:intergenic |
| GCCTGAGAACATGACGCCAG+AGG | 0.658630 | 4_4:-81527318 | Msa0708080:CDS |
| CAGAGCTGTTGATGTATCCG+GGG | 0.662694 | 4_4:-81524661 | Msa0708080:CDS |
| TCTGTAACCGGGAATCGTAG+GGG | 0.664083 | 4_4:+81527202 | None:intergenic |
| CCCCACCAGTCAACAAAACG+GGG | 0.665537 | 4_4:+81527260 | None:intergenic |
| TATTACATCGTAATATATCG+CGG | 0.667622 | 4_4:-81524747 | Msa0708080:CDS |
| ATCGTGGAAAGGATTATAAG+CGG | 0.671974 | 4_4:-81523388 | Msa0708080:CDS |
| AGTGAAGGTGAAGAATCTGG+TGG | 0.672307 | 4_4:-81523188 | Msa0708080:CDS |
| ATCAATGGCCGAGTTCAATG+AGG | 0.672860 | 4_4:-81524613 | Msa0708080:CDS |
| AACCAACTTGAATCAAAGGG+AGG | 0.678021 | 4_4:-81527380 | Msa0708080:CDS |
| GAAGAATCTGGTGGTAACGG+TGG | 0.681684 | 4_4:-81523179 | Msa0708080:CDS |
| AGAATGTGAGATGATGAAAG+AGG | 0.683364 | 4_4:-81524556 | Msa0708080:CDS |
| AGTGTTATGTGGGTGTATCG+TGG | 0.689215 | 4_4:-81527431 | Msa0708080:CDS |
| AGTTTACTGGAATACAAGAG+TGG | 0.691132 | 4_4:-81523464 | Msa0708080:CDS |
| CTGGTCCAGAAATTAACAGG+AGG | 0.701100 | 4_4:-81524792 | Msa0708080:intron |
| GCAATAGATAGACTTCCCAA+AGG | 0.705479 | 4_4:-81523428 | Msa0708080:CDS |
| AGACTTCATTCCAAGCAGTG+TGG | 0.715792 | 4_4:-81524721 | Msa0708080:CDS |
| ATCGTGGTAAGAGTTATCAA+GGG | 0.716676 | 4_4:-81527415 | Msa0708080:CDS |
| TCAGTCTTAAACCAACCACA+CGG | 0.736175 | 4_4:+81523698 | None:intergenic |
| CTAGCAGGAAGAATCCTAAG+CGG | 0.751742 | 4_4:+81527176 | None:intergenic |
| AGAACGTGTTATGTTCCGTG+TGG | 0.757389 | 4_4:-81523713 | Msa0708080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAATAAAATAGTTTAG+CGG | + | chr4_4:81525769-81525788 | None:intergenic | 10.0% |
| !! | TAGATAATCAAAAATATTAA+AGG | + | chr4_4:81526562-81526581 | None:intergenic | 10.0% |
| !! | AATATATTAATTACAAGAAT+TGG | - | chr4_4:81527598-81527617 | Msa0708080:intron | 10.0% |
| !! | GAAAAAAAATATGACATATT+TGG | + | chr4_4:81524834-81524853 | None:intergenic | 15.0% |
| !!! | TATTATATGTTACTTTTGTA+TGG | - | chr4_4:81524982-81525001 | Msa0708080:intron | 15.0% |
| !! | CAAAAAATGCTATAATAATT+AGG | + | chr4_4:81525298-81525317 | None:intergenic | 15.0% |
| !! | TACTAATATATAAAGACAAA+TGG | + | chr4_4:81526655-81526674 | None:intergenic | 15.0% |
| !! | TATATATTAGTAGAAAAATC+TGG | - | chr4_4:81526663-81526682 | Msa0708080:intron | 15.0% |
| !! | GAAATTATCATTAATTAAAG+TGG | + | chr4_4:81527137-81527156 | None:intergenic | 15.0% |
| !!! | TTTTTTTCAAAATTAAGGAA+GGG | + | chr4_4:81527160-81527179 | None:intergenic | 15.0% |
| !!! | AACACTTTTTTTCAAAATTA+AGG | + | chr4_4:81527165-81527184 | None:intergenic | 15.0% |
| !!! | ATTTTGAGAAAAAGAAAAAA+TGG | + | chr4_4:81527322-81527341 | None:intergenic | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | + | chr4_4:81527388-81527407 | None:intergenic | 15.0% |
| !! | GGATTAAATTCAATAAATAA+GGG | + | chr4_4:81527399-81527418 | None:intergenic | 15.0% |
| !! | TGGATTAAATTCAATAAATA+AGG | + | chr4_4:81527400-81527419 | None:intergenic | 15.0% |
| !! | TAAATAGTTAAGAGTTTAAT+AGG | - | chr4_4:81527636-81527655 | Msa0708080:intron | 15.0% |
| !! | TAGAATGACTTAAATATTAT+GGG | - | chr4_4:81527723-81527742 | Msa0708080:intron | 15.0% |
| !!! | AATTGTTTCTATAATTAAAG+AGG | - | chr4_4:81527776-81527795 | Msa0708080:intron | 15.0% |
| !!! | ATTGTTTCTATAATTAAAGA+GGG | - | chr4_4:81527777-81527796 | Msa0708080:intron | 15.0% |
| !!! | TGTTTTATGAAGTTTATATA+TGG | - | chr4_4:81528360-81528379 | Msa0708080:intron | 15.0% |
| !! | AATAGATATTCTATTTGATT+TGG | + | chr4_4:81528623-81528642 | None:intergenic | 15.0% |
| !! | TGAATATTAATGTAAAAGGA+AGG | + | chr4_4:81523535-81523554 | None:intergenic | 20.0% |
| !! | AGCATGAATATTAATGTAAA+AGG | + | chr4_4:81523539-81523558 | None:intergenic | 20.0% |
| !! | ATTGTATTGTATTATAGTGT+TGG | - | chr4_4:81523711-81523730 | Msa0708080:CDS | 20.0% |
| !!! | ATTGTTTTTAACAACAAAAG+AGG | + | chr4_4:81523811-81523830 | None:intergenic | 20.0% |
| !! | TGAATTCATGTAACAAAATT+TGG | - | chr4_4:81523877-81523896 | Msa0708080:intron | 20.0% |
| !! | TACTTGAAAGATTTCTATAA+TGG | - | chr4_4:81524631-81524650 | Msa0708080:CDS | 20.0% |
| !!! | TTTTTTTCAAAATTAGCTTG+AGG | - | chr4_4:81524846-81524865 | Msa0708080:intron | 20.0% |
| !!! | TCTTGTGCTAATTTTTATAA+AGG | - | chr4_4:81525813-81525832 | Msa0708080:intron | 20.0% |
| !!! | CTTGTGCTAATTTTTATAAA+GGG | - | chr4_4:81525814-81525833 | Msa0708080:intron | 20.0% |
| !! | TAATTTGATTGAATACTCAA+GGG | + | chr4_4:81526122-81526141 | None:intergenic | 20.0% |
| !! | ATAATTTGATTGAATACTCA+AGG | + | chr4_4:81526123-81526142 | None:intergenic | 20.0% |
| !! | TTGAGTATTCAATCAAATTA+TGG | - | chr4_4:81526122-81526141 | Msa0708080:intron | 20.0% |
| !! | TCTGATTAAACTAATAGAAA+AGG | + | chr4_4:81526337-81526356 | None:intergenic | 20.0% |
| !!! | AATTACATTTAGAGCATAAT+GGG | + | chr4_4:81526407-81526426 | None:intergenic | 20.0% |
| !! | TAACATGTATGTAGATTAAA+CGG | + | chr4_4:81526786-81526805 | None:intergenic | 20.0% |
| !!! | AAGCTAAACTTTATTTACAT+AGG | - | chr4_4:81526923-81526942 | Msa0708080:CDS | 20.0% |
| !!! | TTTTTTCAAAATTAAGGAAG+GGG | + | chr4_4:81527159-81527178 | None:intergenic | 20.0% |
| !!! | CTTTTTTTCAAAATTAAGGA+AGG | + | chr4_4:81527161-81527180 | None:intergenic | 20.0% |
| !! | AAAAATAATAAATGCTGCAT+TGG | + | chr4_4:81527363-81527382 | None:intergenic | 20.0% |
| !! | TCCACTAACTATAATTAATA+TGG | - | chr4_4:81527430-81527449 | Msa0708080:CDS | 20.0% |
| !! | CCACTAACTATAATTAATAT+GGG | - | chr4_4:81527431-81527450 | Msa0708080:CDS | 20.0% |
| !! | CAAAATTGCCATTAAATTAA+TGG | - | chr4_4:81527568-81527587 | Msa0708080:intron | 20.0% |
| !! | CTAGAATGACTTAAATATTA+TGG | - | chr4_4:81527722-81527741 | Msa0708080:intron | 20.0% |
| !!! | ATTTTTATAAGTGACTTTCA+TGG | - | chr4_4:81527825-81527844 | Msa0708080:intron | 20.0% |
| !! | CAAATAGAATATCTATTAGT+TGG | - | chr4_4:81528626-81528645 | Msa0708080:intron | 20.0% |
| !!! | ATTTTTGAATCTCAGAAATA+TGG | - | chr4_4:81528734-81528753 | Msa0708080:intron | 20.0% |
| !!! | TTTTTGAATCTCAGAAATAT+GGG | - | chr4_4:81528735-81528754 | Msa0708080:intron | 20.0% |
| !!! | AAATAAGACTATTTTGAAAC+AGG | + | chr4_4:81529849-81529868 | None:intergenic | 20.0% |
| ! | TTCTTCGTTGTAATTAGATT+TGG | + | chr4_4:81523078-81523097 | None:intergenic | 25.0% |
| ! | CAAAAAGTTATTTGGAAGTA+GGG | + | chr4_4:81523195-81523214 | None:intergenic | 25.0% |
| ! | TCAAAAAGTTATTTGGAAGT+AGG | + | chr4_4:81523196-81523215 | None:intergenic | 25.0% |
| ! | TTTGTATGAATGATGTAACT+CGG | - | chr4_4:81524001-81524020 | Msa0708080:intron | 25.0% |
| ! | ACTAACAAATACAATCCATT+GGG | + | chr4_4:81524138-81524157 | None:intergenic | 25.0% |
| ! | AACTAACAAATACAATCCAT+TGG | + | chr4_4:81524139-81524158 | None:intergenic | 25.0% |
| ! | ATATTTACAGACTTGCATTT+GGG | + | chr4_4:81524334-81524353 | None:intergenic | 25.0% |
| ! | TATATTTACAGACTTGCATT+TGG | + | chr4_4:81524335-81524354 | None:intergenic | 25.0% |
| !! | GTCTGTAAATATATGTTTTG+CGG | - | chr4_4:81524342-81524361 | Msa0708080:intron | 25.0% |
| ! | TTCATATAATAGCTAGGATA+TGG | - | chr4_4:81524385-81524404 | Msa0708080:intron | 25.0% |
| ! | AAACCACAATTAATATGCAT+TGG | - | chr4_4:81524436-81524455 | Msa0708080:intron | 25.0% |
| ! | AACCACAATTAATATGCATT+GGG | - | chr4_4:81524437-81524456 | Msa0708080:intron | 25.0% |
| ! | TAGGATAATTCTATATCACA+TGG | + | chr4_4:81524525-81524544 | None:intergenic | 25.0% |
| ! | GTGATATAGAATTATCCTAT+AGG | - | chr4_4:81524526-81524545 | Msa0708080:CDS | 25.0% |
| ! | CATATATCATAACACATACT+AGG | + | chr4_4:81524675-81524694 | None:intergenic | 25.0% |
| !! | AAATATGACATATTTGGTGA+GGG | + | chr4_4:81524828-81524847 | None:intergenic | 25.0% |
| !! | AAAATATGACATATTTGGTG+AGG | + | chr4_4:81524829-81524848 | None:intergenic | 25.0% |
| ! | TCTAGTCTAGTAGTAATTAT+TGG | - | chr4_4:81524885-81524904 | Msa0708080:intron | 25.0% |
| ! | ACTTGAATTCATGTAACATT+TGG | + | chr4_4:81525045-81525064 | None:intergenic | 25.0% |
| !! | AATTTTGTAGATTTGTACAG+CGG | - | chr4_4:81525337-81525356 | Msa0708080:intron | 25.0% |
| ! | AATAATTGTCCATAATTCGA+TGG | + | chr4_4:81525998-81526017 | None:intergenic | 25.0% |
| !!! | GCATATTTTAGAATGAATAG+TGG | - | chr4_4:81526078-81526097 | Msa0708080:intron | 25.0% |
| ! | AATTTGATTGAATACTCAAG+GGG | + | chr4_4:81526121-81526140 | None:intergenic | 25.0% |
| ! | GATAGAATCATAAACCAATT+TGG | + | chr4_4:81526293-81526312 | None:intergenic | 25.0% |
| ! | CTTTAAATTAGTCGTATCTT+TGG | + | chr4_4:81526362-81526381 | None:intergenic | 25.0% |
| ! | CAAAGATACGACTAATTTAA+AGG | - | chr4_4:81526360-81526379 | Msa0708080:intron | 25.0% |
| !! | GAATTACATTTAGAGCATAA+TGG | + | chr4_4:81526408-81526427 | None:intergenic | 25.0% |
| !!! | ACAACAATTTTTTGTTGCTT+CGG | - | chr4_4:81526840-81526859 | Msa0708080:intron | 25.0% |
| !! | CTAAACTTTATTTACATAGG+TGG | - | chr4_4:81526926-81526945 | Msa0708080:CDS | 25.0% |
| !! | GCTAAAGTGACTTATATTTT+GGG | + | chr4_4:81527207-81527226 | None:intergenic | 25.0% |
| ! | CCCATATTAATTATAGTTAG+TGG | + | chr4_4:81527434-81527453 | None:intergenic | 25.0% |
| !!! | ATTGATTGTGTTGATTTTGA+TGG | + | chr4_4:81527483-81527502 | None:intergenic | 25.0% |
| ! | CTCTAAATAATAGTCGTTTA+AGG | + | chr4_4:81527531-81527550 | None:intergenic | 25.0% |
| ! | AAACGACTATTATTTAGAGA+TGG | - | chr4_4:81527532-81527551 | Msa0708080:intron | 25.0% |
| ! | TTGCCATTAAATTAATGGTA+TGG | - | chr4_4:81527573-81527592 | Msa0708080:intron | 25.0% |
| ! | TGCCATTAAATTAATGGTAT+GGG | - | chr4_4:81527574-81527593 | Msa0708080:intron | 25.0% |
| ! | TTCCCATACCATTAATTTAA+TGG | + | chr4_4:81527579-81527598 | None:intergenic | 25.0% |
| ! | ACAAGAATTGGAAAAAGAAA+TGG | - | chr4_4:81527610-81527629 | Msa0708080:intron | 25.0% |
| !!! | TGCTTCATTGGTATTTTAAA+AGG | - | chr4_4:81527673-81527692 | Msa0708080:intron | 25.0% |
| !!! | GATTTGAAAAGTTTTTTCTC+TGG | - | chr4_4:81528013-81528032 | Msa0708080:intron | 25.0% |
| ! | ATATTTATTCCTTAGCAGTA+AGG | + | chr4_4:81528060-81528079 | None:intergenic | 25.0% |
| ! | TATTACATCGTAATATATCG+CGG | - | chr4_4:81528077-81528096 | Msa0708080:intron | 25.0% |
| ! | ATATCTGAACCTTGAAATTT+AGG | - | chr4_4:81528594-81528613 | Msa0708080:intron | 25.0% |
| ! | ATTTGGAAACCTAAATTTCA+AGG | + | chr4_4:81528606-81528625 | None:intergenic | 25.0% |
| ! | AAAACATATCTTATGAACCT+TGG | - | chr4_4:81528678-81528697 | Msa0708080:intron | 25.0% |
| ! | TACAGTAATAACACATTTGA+AGG | - | chr4_4:81528886-81528905 | Msa0708080:intron | 25.0% |
| !! | AGCTAAAATTGATTCATCTA+TGG | - | chr4_4:81529045-81529064 | Msa0708080:intron | 25.0% |
| ! | AATGACAATTAATTATCTGC+TGG | - | chr4_4:81529603-81529622 | Msa0708080:CDS | 25.0% |
| GCAAAGTCTGAATTTGAATT+TGG | + | chr4_4:81523015-81523034 | None:intergenic | 30.0% | |
| !! | CGTTTTGATCAGATAATTTC+CGG | + | chr4_4:81523154-81523173 | None:intergenic | 30.0% |
| TCACGGTTCAAAAAGTTATT+TGG | + | chr4_4:81523203-81523222 | None:intergenic | 30.0% | |
| ! | ATAACTTTTTGAACCGTGAA+TGG | - | chr4_4:81523204-81523223 | Msa0708080:intron | 30.0% |
| AAAATCAGTATCCCTAAATC+TGG | - | chr4_4:81523380-81523399 | Msa0708080:CDS | 30.0% | |
| ! | AAAGATCTGGAATTTGAGAT+TGG | + | chr4_4:81523904-81523923 | None:intergenic | 30.0% |
| GATGATGAAAGAAAAAGCAA+AGG | + | chr4_4:81524098-81524117 | None:intergenic | 30.0% | |
| TCATCATCGAATAACAAATC+TGG | - | chr4_4:81524110-81524129 | Msa0708080:intron | 30.0% | |
| ! | TATTTGTTAGTTGCGAGATT+TGG | - | chr4_4:81524147-81524166 | Msa0708080:intron | 30.0% |
| TTGGAATTGATCAAATAGTC+AGG | + | chr4_4:81524183-81524202 | None:intergenic | 30.0% | |
| TATCTGTTAGTTGCAAGATT+TGG | + | chr4_4:81524415-81524434 | None:intergenic | 30.0% | |
| TCATTGTCGAATTACAATTC+CGG | + | chr4_4:81524465-81524484 | None:intergenic | 30.0% | |
| GACAATGAAAGAAAAAGTGA+AGG | - | chr4_4:81524477-81524496 | Msa0708080:intron | 30.0% | |
| AGGTTTCTATTTCATCCTAT+AGG | + | chr4_4:81524544-81524563 | None:intergenic | 30.0% | |
| TATCATAACACATACTAGGA+CGG | + | chr4_4:81524671-81524690 | None:intergenic | 30.0% | |
| GACCCATATATACATTATCT+CGG | - | chr4_4:81524729-81524748 | Msa0708080:CDS | 30.0% | |
| CACCGAGATAATGTATATAT+GGG | + | chr4_4:81524734-81524753 | None:intergenic | 30.0% | |
| TCACCGAGATAATGTATATA+TGG | + | chr4_4:81524735-81524754 | None:intergenic | 30.0% | |
| ! | AATATGACATATTTGGTGAG+GGG | + | chr4_4:81524827-81524846 | None:intergenic | 30.0% |
| TACTAGACTAGATAGATTGT+GGG | + | chr4_4:81524877-81524896 | None:intergenic | 30.0% | |
| AGTCTAGTAGTAATTATTGG+TGG | - | chr4_4:81524888-81524907 | Msa0708080:intron | 30.0% | |
| TAAACGAAAACTAGTGCTAA+AGG | - | chr4_4:81524953-81524972 | Msa0708080:intron | 30.0% | |
| AAACGAAAACTAGTGCTAAA+GGG | - | chr4_4:81524954-81524973 | Msa0708080:intron | 30.0% | |
| ! | ACAGTTTTTATCAGCTGAAT+AGG | - | chr4_4:81525108-81525127 | Msa0708080:intron | 30.0% |
| ! | AGAATTTTTGCGAGTAAAGA+TGG | + | chr4_4:81525149-81525168 | None:intergenic | 30.0% |
| ! | TATATTTGAAACTCAGATGC+AGG | - | chr4_4:81525232-81525251 | Msa0708080:intron | 30.0% |
| TCAGTTCATTGTTTGTATTC+TGG | + | chr4_4:81525929-81525948 | None:intergenic | 30.0% | |
| GAATACAAACAATGAACTGA+TGG | - | chr4_4:81525929-81525948 | Msa0708080:intron | 30.0% | |
| AGAATCATAAACCAATTTGG+CGG | + | chr4_4:81526290-81526309 | None:intergenic | 30.0% | |
| CAAATATGAAACAGTCAACT+GGG | + | chr4_4:81526492-81526511 | None:intergenic | 30.0% | |
| TCAAATATGAAACAGTCAAC+TGG | + | chr4_4:81526493-81526512 | None:intergenic | 30.0% | |
| AATGGTAGCATATAAGATGT+CGG | + | chr4_4:81526637-81526656 | None:intergenic | 30.0% | |
| GAAGCAACAAAAAATTGTTG+TGG | + | chr4_4:81526841-81526860 | None:intergenic | 30.0% | |
| !!! | ATTTTTTGTTGCTTCGGTAT+TGG | - | chr4_4:81526846-81526865 | Msa0708080:intron | 30.0% |
| TTATTTACATAGGTGGAGTT+TGG | - | chr4_4:81526933-81526952 | Msa0708080:CDS | 30.0% | |
| ! | TGACTATTTTACAACTATCC+CGG | + | chr4_4:81527108-81527127 | None:intergenic | 30.0% |
| !! | AAGTGACTTATATTTTGGGA+TGG | + | chr4_4:81527203-81527222 | None:intergenic | 30.0% |
| ! | CGCTAAAGTGACTTATATTT+TGG | + | chr4_4:81527208-81527227 | None:intergenic | 30.0% |
| AAGAGACAATTATTGTGAGA+CGG | + | chr4_4:81527297-81527316 | None:intergenic | 30.0% | |
| AGGTTTATGCACGATTATTA+AGG | + | chr4_4:81527511-81527530 | None:intergenic | 30.0% | |
| GACTATTATTTAGAGATGGA+GGG | - | chr4_4:81527536-81527555 | Msa0708080:intron | 30.0% | |
| !! | AAACAAAGTTGATGCTTCAT+TGG | - | chr4_4:81527661-81527680 | Msa0708080:intron | 30.0% |
| ACTTAAATATTATGGGACAG+AGG | - | chr4_4:81527730-81527749 | Msa0708080:intron | 30.0% | |
| CTTAAATATTATGGGACAGA+GGG | - | chr4_4:81527731-81527750 | Msa0708080:intron | 30.0% | |
| ! | TCTTTTCTTCGAGTATAATG+TGG | + | chr4_4:81527968-81527987 | None:intergenic | 30.0% |
| TTTCATAAGCCTAACATTCT+TGG | + | chr4_4:81528303-81528322 | None:intergenic | 30.0% | |
| TGAGAAGTCATTATGTTCTT+TGG | - | chr4_4:81528536-81528555 | Msa0708080:intron | 30.0% | |
| GTAATACAGAAAGCTAATTC+AGG | + | chr4_4:81528869-81528888 | None:intergenic | 30.0% | |
| ! | TTTTTCTGCTCTTGACTTTT+TGG | + | chr4_4:81529020-81529039 | None:intergenic | 30.0% |
| TGATAATCTGTAGATACACT+TGG | - | chr4_4:81529231-81529250 | Msa0708080:intron | 30.0% | |
| !!! | CGTTTTTTCAACAAAAGCAA+GGG | + | chr4_4:81529337-81529356 | None:intergenic | 30.0% |
| !! | CCTTGCTTTTGTTGAAAAAA+CGG | - | chr4_4:81529335-81529354 | Msa0708080:CDS | 30.0% |
| TAGATAAGAGAGAATCCTTT+GGG | + | chr4_4:81529414-81529433 | None:intergenic | 30.0% | |
| ! | TCATTTTGTGTCTGAAAGTT+TGG | + | chr4_4:81529715-81529734 | None:intergenic | 30.0% |
| AACTTTCAGACACAAAATGA+TGG | - | chr4_4:81529715-81529734 | Msa0708080:CDS | 30.0% | |
| ACTTTCAGACACAAAATGAT+GGG | - | chr4_4:81529716-81529735 | Msa0708080:CDS | 30.0% | |
| GTTAACATAGATAAGAACCT+AGG | + | chr4_4:81529782-81529801 | None:intergenic | 30.0% | |
| ! | AACAGGTTTTCACTACAATT+GGG | + | chr4_4:81529832-81529851 | None:intergenic | 30.0% |
| ! | AAACAGGTTTTCACTACAAT+TGG | + | chr4_4:81529833-81529852 | None:intergenic | 30.0% |
| CTTAGCAAGAACATGAAGTA+AGG | + | chr4_4:81522944-81522963 | None:intergenic | 35.0% | |
| ATTTGGCTGCAAAATTGAGT+GGG | + | chr4_4:81522998-81523017 | None:intergenic | 35.0% | |
| AATTTGGCTGCAAAATTGAG+TGG | + | chr4_4:81522999-81523018 | None:intergenic | 35.0% | |
| GATCAGATAATTTCCGGAAT+CGG | + | chr4_4:81523148-81523167 | None:intergenic | 35.0% | |
| AGTTATTTGGAAGTAGGGTT+CGG | + | chr4_4:81523190-81523209 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | - | chr4_4:81523283-81523302 | Msa0708080:intron | 35.0% | |
| GAAGAAGAAGAAGGAAGTAA+CGG | - | chr4_4:81523295-81523314 | Msa0708080:intron | 35.0% | |
| TTCAAAGAATCCATCATCAG+TGG | - | chr4_4:81523420-81523439 | Msa0708080:CDS | 35.0% | |
| ACATGTGATTTCATTGTGAG+AGG | + | chr4_4:81523583-81523602 | None:intergenic | 35.0% | |
| AATGCAACAGTAACCATTAG+TGG | + | chr4_4:81523746-81523765 | None:intergenic | 35.0% | |
| TTCCAGATCTTTATACCAAG+AGG | - | chr4_4:81523912-81523931 | Msa0708080:intron | 35.0% | |
| TCCAGATCTTTATACCAAGA+GGG | - | chr4_4:81523913-81523932 | Msa0708080:intron | 35.0% | |
| TATGGAATTATCCTAGAGGA+TGG | + | chr4_4:81524045-81524064 | None:intergenic | 35.0% | |
| TAGGATAATTCCATATCGCA+TGG | - | chr4_4:81524050-81524069 | Msa0708080:intron | 35.0% | |
| AGCTATTATATGAACTCGAG+TGG | + | chr4_4:81524379-81524398 | None:intergenic | 35.0% | |
| CTCGAGTTCATATAATAGCT+AGG | - | chr4_4:81524379-81524398 | Msa0708080:intron | 35.0% | |
| TGCCCAATGCATATTAATTG+TGG | + | chr4_4:81524442-81524461 | None:intergenic | 35.0% | |
| AATTAATATGCATTGGGCAC+CGG | - | chr4_4:81524443-81524462 | Msa0708080:intron | 35.0% | |
| GGATGAAATAGAAACCTTTC+TGG | - | chr4_4:81524547-81524566 | Msa0708080:CDS | 35.0% | |
| GAAATAGAAACCTTTCTGGA+TGG | - | chr4_4:81524551-81524570 | Msa0708080:CDS | 35.0% | |
| CAATTCTGGCATCAAGATTA+TGG | - | chr4_4:81524790-81524809 | Msa0708080:intron | 35.0% | |
| ACTAGACTAGATAGATTGTG+GGG | + | chr4_4:81524876-81524895 | None:intergenic | 35.0% | |
| CTACTAGACTAGATAGATTG+TGG | + | chr4_4:81524878-81524897 | None:intergenic | 35.0% | |
| !! | CGTTTAGCTCTTAAATGTCT+TGG | + | chr4_4:81524939-81524958 | None:intergenic | 35.0% |
| AACGAAAACTAGTGCTAAAG+GGG | - | chr4_4:81524955-81524974 | Msa0708080:intron | 35.0% | |
| !! | GAACTGGAGGATTAGTTATT+TGG | - | chr4_4:81525361-81525380 | Msa0708080:intron | 35.0% |
| TATCGTGGTAAGAGTTATCA+AGG | - | chr4_4:81525408-81525427 | Msa0708080:intron | 35.0% | |
| ATCGTGGTAAGAGTTATCAA+GGG | - | chr4_4:81525409-81525428 | Msa0708080:intron | 35.0% | |
| AAAATGACAAGGAAGAGCTT+TGG | + | chr4_4:81525724-81525743 | None:intergenic | 35.0% | |
| ACAAGATTCACATCAGCAAA+AGG | + | chr4_4:81525799-81525818 | None:intergenic | 35.0% | |
| GGGAGAAATAGAAATCTTCA+AGG | - | chr4_4:81525834-81525853 | Msa0708080:intron | 35.0% | |
| AAATAGAAATCTTCAAGGCC+TGG | - | chr4_4:81525839-81525858 | Msa0708080:intron | 35.0% | |
| ! | ATGTGCTATTCTTAAGCTGT+GGG | - | chr4_4:81525863-81525882 | Msa0708080:intron | 35.0% |
| TAATTCGATGGTACCAAACA+AGG | + | chr4_4:81525986-81526005 | None:intergenic | 35.0% | |
| TGTTTGGTACCATCGAATTA+TGG | - | chr4_4:81525986-81526005 | Msa0708080:intron | 35.0% | |
| !! | TTAAGTGTCCTTTGAAGTGT+TGG | - | chr4_4:81526231-81526250 | Msa0708080:intron | 35.0% |
| ! | TGCTCTAAATGTAATTCACG+AGG | - | chr4_4:81526411-81526430 | Msa0708080:intron | 35.0% |
| GTAGGACAGATTTATTCATG+CGG | + | chr4_4:81526460-81526479 | None:intergenic | 35.0% | |
| AAAATTGTTGTGGACTTGAC+AGG | + | chr4_4:81526831-81526850 | None:intergenic | 35.0% | |
| !!! | TGACTTATATTTTGGGATGG+AGG | + | chr4_4:81527200-81527219 | None:intergenic | 35.0% |
| AGTTAGTGGAGTAGTTAAGT+TGG | + | chr4_4:81527420-81527439 | None:intergenic | 35.0% | |
| CGACTATTATTTAGAGATGG+AGG | - | chr4_4:81527535-81527554 | Msa0708080:intron | 35.0% | |
| AGTATAATGTGGCATGACAA+GGG | + | chr4_4:81527957-81527976 | None:intergenic | 35.0% | |
| !!! | TGCCATTTTATCTGAAAGAC+AGG | - | chr4_4:81528127-81528146 | Msa0708080:intron | 35.0% |
| CTCCTGTCTTTCAGATAAAA+TGG | + | chr4_4:81528132-81528151 | None:intergenic | 35.0% | |
| AGAATGTGAGATGATGAAAG+AGG | - | chr4_4:81528268-81528287 | Msa0708080:intron | 35.0% | |
| AAGTAGATACTTACAACAGC+TGG | + | chr4_4:81528341-81528360 | None:intergenic | 35.0% | |
| !! | TTTAGATTGAGAGCACTTGT+TGG | - | chr4_4:81528405-81528424 | Msa0708080:intron | 35.0% |
| ! | TCACAAACAGTTTGCTTTCA+AGG | - | chr4_4:81528436-81528455 | Msa0708080:intron | 35.0% |
| ! | CACAAACAGTTTGCTTTCAA+GGG | - | chr4_4:81528437-81528456 | Msa0708080:intron | 35.0% |
| ! | ACAAACAGTTTGCTTTCAAG+GGG | - | chr4_4:81528438-81528457 | Msa0708080:intron | 35.0% |
| TATCTATTAGTTGGAGCGTA+TGG | - | chr4_4:81528635-81528654 | Msa0708080:intron | 35.0% | |
| TGCCATATTAGCATTCAACA+TGG | - | chr4_4:81528831-81528850 | Msa0708080:intron | 35.0% | |
| CACCATGTTGAATGCTAATA+TGG | + | chr4_4:81528836-81528855 | None:intergenic | 35.0% | |
| ATTGTTTCCCTCCTATTATC+AGG | + | chr4_4:81529082-81529101 | None:intergenic | 35.0% | |
| CTACAGATTATCATAAGCAG+CGG | + | chr4_4:81529224-81529243 | None:intergenic | 35.0% | |
| TTGAGAATATGCATTTGCAC+TGG | - | chr4_4:81529271-81529290 | Msa0708080:intron | 35.0% | |
| !!! | CCGTTTTTTCAACAAAAGCA+AGG | + | chr4_4:81529338-81529357 | None:intergenic | 35.0% |
| !! | TGAAAAAACGGCTAGTTTAC+TGG | - | chr4_4:81529347-81529366 | Msa0708080:CDS | 35.0% |
| AGTTTACTGGAATACAAGAG+TGG | - | chr4_4:81529360-81529379 | Msa0708080:CDS | 35.0% | |
| GTAGATAAGAGAGAATCCTT+TGG | + | chr4_4:81529415-81529434 | None:intergenic | 35.0% | |
| TTCTCTCTTATCTACTATCG+TGG | - | chr4_4:81529420-81529439 | Msa0708080:CDS | 35.0% | |
| TCTTATCTACTATCGTGGAA+AGG | - | chr4_4:81529425-81529444 | Msa0708080:CDS | 35.0% | |
| ATCGTGGAAAGGATTATAAG+CGG | - | chr4_4:81529436-81529455 | Msa0708080:CDS | 35.0% | |
| TTCCTATGTCGTAGAGTAAT+GGG | + | chr4_4:81529462-81529481 | None:intergenic | 35.0% | |
| ! | ATGCTTTTGTCTTCGTCAAA+AGG | + | chr4_4:81529485-81529504 | None:intergenic | 35.0% |
| ATGATACGAAAGACAACGAT+TGG | - | chr4_4:81529676-81529695 | Msa0708080:CDS | 35.0% | |
| TGATACGAAAGACAACGATT+GGG | - | chr4_4:81529677-81529696 | Msa0708080:CDS | 35.0% | |
| GTATTTGCGTAATAATGCCT+AGG | - | chr4_4:81529762-81529781 | Msa0708080:CDS | 35.0% | |
| TTCGGTGATGAAGAGATCAT+TGG | + | chr4_4:81522972-81522991 | None:intergenic | 40.0% | |
| AATGATCTCTTCATCACCGA+AGG | - | chr4_4:81522971-81522990 | Msa0708080:three_prime_UTR | 40.0% | |
| ATAATTTCCGGAATCGGAGA+AGG | + | chr4_4:81523142-81523161 | None:intergenic | 40.0% | |
| AGCAATGGGAATTCATCTGA+AGG | - | chr4_4:81523355-81523374 | Msa0708080:CDS | 40.0% | |
| CATTGGTATTCCACTGATGA+TGG | + | chr4_4:81523433-81523452 | None:intergenic | 40.0% | |
| TCAGTGGAATACCAATGAGT+TGG | - | chr4_4:81523436-81523455 | Msa0708080:CDS | 40.0% | |
| TTTGAGCTTCACCAACTCAT+TGG | + | chr4_4:81523450-81523469 | None:intergenic | 40.0% | |
| ! | CATTGTGAGAGGCATAGATA+TGG | + | chr4_4:81523572-81523591 | None:intergenic | 40.0% |
| TTGGTACGTACTACCACTAA+TGG | - | chr4_4:81523730-81523749 | Msa0708080:CDS | 40.0% | |
| ACCCTCTTGGTATAAAGATC+TGG | + | chr4_4:81523917-81523936 | None:intergenic | 40.0% | |
| CTTCGATTATCATACCCTCT+TGG | + | chr4_4:81523930-81523949 | None:intergenic | 40.0% | |
| TATCCTCTATTCCATCCTCT+AGG | - | chr4_4:81524031-81524050 | Msa0708080:intron | 40.0% | |
| TATCCTAGAGGATGGAATAG+AGG | + | chr4_4:81524037-81524056 | None:intergenic | 40.0% | |
| GCGATATGGAATTATCCTAG+AGG | + | chr4_4:81524049-81524068 | None:intergenic | 40.0% | |
| AGAACAATGACCATGCGATA+TGG | + | chr4_4:81524063-81524082 | None:intergenic | 40.0% | |
| CATGGTCATTGTTCTGCAAT+TGG | - | chr4_4:81524068-81524087 | Msa0708080:intron | 40.0% | |
| ATAACAAATCTGGTGCCCAA+TGG | - | chr4_4:81524120-81524139 | Msa0708080:intron | 40.0% | |
| AATTCCAAAGTGCATCCTGT+TGG | - | chr4_4:81524195-81524214 | Msa0708080:intron | 40.0% | |
| TCAGAAATCACCATCCAGAA+AGG | + | chr4_4:81524564-81524583 | None:intergenic | 40.0% | |
| !! | GCTCAGTTTTCTTTGTTTGC+AGG | + | chr4_4:81524598-81524617 | None:intergenic | 40.0% |
| GTGGTAACAACAATAGCTTG+AGG | - | chr4_4:81524907-81524926 | Msa0708080:intron | 40.0% | |
| ACGAAAACTAGTGCTAAAGG+GGG | - | chr4_4:81524956-81524975 | Msa0708080:intron | 40.0% | |
| CTGAATAGGAATAACAAGCC+AGG | - | chr4_4:81525122-81525141 | Msa0708080:intron | 40.0% | |
| AGATGAAGTAGAGTTCACTG+TGG | + | chr4_4:81525182-81525201 | None:intergenic | 40.0% | |
| ATGCAGGCGCAGAAATAAAT+AGG | - | chr4_4:81525248-81525267 | Msa0708080:intron | 40.0% | |
| !! | CTGGAGGATTAGTTATTTGG+AGG | - | chr4_4:81525364-81525383 | Msa0708080:intron | 40.0% |
| !! | GGATTAGTTATTTGGAGGTC+AGG | - | chr4_4:81525369-81525388 | Msa0708080:intron | 40.0% |
| AGTTATCAAGGGCCAACAAA+TGG | - | chr4_4:81525420-81525439 | Msa0708080:intron | 40.0% | |
| GTTATCAAGGGCCAACAAAT+GGG | - | chr4_4:81525421-81525440 | Msa0708080:intron | 40.0% | |
| !! | TCAAGTTGGTTCCCATTTGT+TGG | + | chr4_4:81525435-81525454 | None:intergenic | 40.0% |
| TGGGAACCAACTTGAATCAA+AGG | - | chr4_4:81525440-81525459 | Msa0708080:intron | 40.0% | |
| GGGAACCAACTTGAATCAAA+GGG | - | chr4_4:81525441-81525460 | Msa0708080:intron | 40.0% | |
| AACCAACTTGAATCAAAGGG+AGG | - | chr4_4:81525444-81525463 | Msa0708080:intron | 40.0% | |
| ! | AACCGGATGCTTGATGATTT+CGG | - | chr4_4:81525540-81525559 | Msa0708080:intron | 40.0% |
| ! | CATGTGCTATTCTTAAGCTG+TGG | - | chr4_4:81525862-81525881 | Msa0708080:intron | 40.0% |
| TAAGCTGTGGGAGAAAAGTT+TGG | - | chr4_4:81525875-81525894 | Msa0708080:intron | 40.0% | |
| AAACAATGAACTGATGGCTC+TGG | - | chr4_4:81525935-81525954 | Msa0708080:intron | 40.0% | |
| GTTATCTGCAGTTCCTTGTT+TGG | - | chr4_4:81525970-81525989 | Msa0708080:intron | 40.0% | |
| !! | TAAGTGGGATTGGCTATAGA+AGG | + | chr4_4:81526183-81526202 | None:intergenic | 40.0% |
| TATAGCCAATCCCACTTAGT+GGG | - | chr4_4:81526185-81526204 | Msa0708080:intron | 40.0% | |
| AAGCATAGCCAACACTTCAA+AGG | + | chr4_4:81526242-81526261 | None:intergenic | 40.0% | |
| ! | CTATCTTTGAGAGAGCTAGT+TGG | - | chr4_4:81526308-81526327 | Msa0708080:intron | 40.0% |
| AATAGCGCACATAGTCAAAC+TGG | - | chr4_4:81526703-81526722 | Msa0708080:intron | 40.0% | |
| ATAGCGCACATAGTCAAACT+GGG | - | chr4_4:81526704-81526723 | Msa0708080:intron | 40.0% | |
| AGCTTGACATTATAACCTCG+TGG | - | chr4_4:81527065-81527084 | Msa0708080:intron | 40.0% | |
| GCTTGACATTATAACCTCGT+GGG | - | chr4_4:81527066-81527085 | Msa0708080:intron | 40.0% | |
| ! | CTATTTTACAACTATCCCGG+AGG | + | chr4_4:81527105-81527124 | None:intergenic | 40.0% |
| GACAATTATTGTGAGACGGA+GGG | + | chr4_4:81527293-81527312 | None:intergenic | 40.0% | |
| AGACAATTATTGTGAGACGG+AGG | + | chr4_4:81527294-81527313 | None:intergenic | 40.0% | |
| CAGCTCACAATGTATCTCTT+AGG | + | chr4_4:81527880-81527899 | None:intergenic | 40.0% | |
| GAGTATAATGTGGCATGACA+AGG | + | chr4_4:81527958-81527977 | None:intergenic | 40.0% | |
| TCTCTGGTCCAGAAATTAAC+AGG | - | chr4_4:81528029-81528048 | Msa0708080:intron | 40.0% | |
| AGGTACCTCCTGTTAATTTC+TGG | + | chr4_4:81528040-81528059 | None:intergenic | 40.0% | |
| TTCTTTGGCATTGTGATGCT+AGG | - | chr4_4:81528551-81528570 | Msa0708080:intron | 40.0% | |
| TCTTTGGCATTGTGATGCTA+GGG | - | chr4_4:81528552-81528571 | Msa0708080:intron | 40.0% | |
| TGACTTCATAGACTGAACCA+AGG | + | chr4_4:81528698-81528717 | None:intergenic | 40.0% | |
| TTGGTTCAGTCTATGAAGTC+AGG | - | chr4_4:81528697-81528716 | Msa0708080:intron | 40.0% | |
| !! | TGCTCTTGACTTTTTGGTGT+CGG | + | chr4_4:81529014-81529033 | None:intergenic | 40.0% |
| TCAGTCTTAAACCAACCACA+CGG | + | chr4_4:81529129-81529148 | None:intergenic | 40.0% | |
| !! | TGTGGTTGGTTTAAGACTGA+AGG | - | chr4_4:81529129-81529148 | Msa0708080:intron | 40.0% |
| AGAATATGCATTTGCACTGG+AGG | - | chr4_4:81529274-81529293 | Msa0708080:intron | 40.0% | |
| TTACTGGAATACAAGAGTGG+TGG | - | chr4_4:81529363-81529382 | Msa0708080:CDS | 40.0% | |
| GCAATAGATAGACTTCCCAA+AGG | - | chr4_4:81529396-81529415 | Msa0708080:CDS | 40.0% | |
| GTTCCTATGTCGTAGAGTAA+TGG | + | chr4_4:81529463-81529482 | None:intergenic | 40.0% | |
| AATAACCATTCAACGACACG+AGG | - | chr4_4:81529515-81529534 | Msa0708080:CDS | 40.0% | |
| TAGAGTGAAGGTGAAGAATC+TGG | - | chr4_4:81529633-81529652 | Msa0708080:CDS | 40.0% | |
| TACTTCAATCTGCCTTCTAG+AGG | + | chr4_4:81529745-81529764 | None:intergenic | 40.0% | |
| GCAAAATTGAGTGGGTCCTT+CGG | + | chr4_4:81522990-81523009 | None:intergenic | 45.0% | |
| TTTGGAAGTAGGGTTCGGAT+TGG | + | chr4_4:81523185-81523204 | None:intergenic | 45.0% | |
| ACTGAGTCAATTGCGAGCAA+TGG | - | chr4_4:81523340-81523359 | Msa0708080:CDS | 45.0% | |
| CTGAGTCAATTGCGAGCAAT+GGG | - | chr4_4:81523341-81523360 | Msa0708080:CDS | 45.0% | |
| ATACATGTTTCGCGACCAAC+AGG | + | chr4_4:81524213-81524232 | None:intergenic | 45.0% | |
| GTTGGTCGCGAAACATGTAT+TGG | - | chr4_4:81524213-81524232 | Msa0708080:intron | 45.0% | |
| GCTGTTAATACTCACCATCC+AGG | - | chr4_4:81524760-81524779 | Msa0708080:CDS | 45.0% | |
| AGAATTGATGTGCACCTGGA+TGG | + | chr4_4:81524777-81524796 | None:intergenic | 45.0% | |
| ATCCAGGTGCACATCAATTC+TGG | - | chr4_4:81524776-81524795 | Msa0708080:CDS | 45.0% | |
| TTTGCGAGTAAAGATGGTCC+TGG | + | chr4_4:81525143-81525162 | None:intergenic | 45.0% | |
| !! | GAGGTCAGGAAGTGTTATGT+GGG | - | chr4_4:81525383-81525402 | Msa0708080:intron | 45.0% |
| AGTGTTATGTGGGTGTATCG+TGG | - | chr4_4:81525393-81525412 | Msa0708080:intron | 45.0% | |
| CACCTCCCTTTGATTCAAGT+TGG | + | chr4_4:81525449-81525468 | None:intergenic | 45.0% | |
| GACCGAAATCATCAAGCATC+CGG | + | chr4_4:81525545-81525564 | None:intergenic | 45.0% | |
| TACCCCACCAGTCAACAAAA+CGG | + | chr4_4:81525569-81525588 | None:intergenic | 45.0% | |
| TTCTGTAACCGGGAATCGTA+GGG | + | chr4_4:81525626-81525645 | None:intergenic | 45.0% | |
| CTAGCAGGAAGAATCCTAAG+CGG | + | chr4_4:81525651-81525670 | None:intergenic | 45.0% | |
| ! | CATTTTCGTGTGCTCATCGT+TGG | + | chr4_4:81525691-81525710 | None:intergenic | 45.0% |
| !!! | TCTTCCTTGTCATTTTGCCC+TGG | - | chr4_4:81525728-81525747 | Msa0708080:intron | 45.0% |
| !!! | CTTCCTTGTCATTTTGCCCT+GGG | - | chr4_4:81525729-81525748 | Msa0708080:intron | 45.0% |
| GCTTAAGAATAGCACATGCC+AGG | + | chr4_4:81525860-81525879 | None:intergenic | 45.0% | |
| GCAAAGATTGCTGTCAAGCT+TGG | - | chr4_4:81525900-81525919 | Msa0708080:intron | 45.0% | |
| CTATAGCCAATCCCACTTAG+TGG | - | chr4_4:81526184-81526203 | Msa0708080:intron | 45.0% | |
| ! | CTTTTCCCACTAAGTGGGAT+TGG | + | chr4_4:81526193-81526212 | None:intergenic | 45.0% |
| CAATCCCACTTAGTGGGAAA+AGG | - | chr4_4:81526191-81526210 | Msa0708080:intron | 45.0% | |
| ! | CAAGCCTTTTCCCACTAAGT+GGG | + | chr4_4:81526198-81526217 | None:intergenic | 45.0% |
| ! | ACCAATTTGGCGGATACTCT+GGG | + | chr4_4:81526280-81526299 | None:intergenic | 45.0% |
| ! | AACCAATTTGGCGGATACTC+TGG | + | chr4_4:81526281-81526300 | None:intergenic | 45.0% |
| TCAACTGGGTCACTCATTGT+AGG | + | chr4_4:81526478-81526497 | None:intergenic | 45.0% | |
| TCAAACTGGGTCACTCATTG+TGG | - | chr4_4:81526717-81526736 | Msa0708080:intron | 45.0% | |
| CAAACTGGGTCACTCATTGT+GGG | - | chr4_4:81526718-81526737 | Msa0708080:intron | 45.0% | |
| AAACTGGGTCACTCATTGTG+GGG | - | chr4_4:81526719-81526738 | Msa0708080:intron | 45.0% | |
| ! | CTTCGGTATTGGATGTGCTT+TGG | - | chr4_4:81526857-81526876 | Msa0708080:intron | 45.0% |
| !! | TGGATGTGCTTTGGAATGCA+CGG | - | chr4_4:81526866-81526885 | Msa0708080:intron | 45.0% |
| GACAAATGTTGCGACTGTTG+GGG | + | chr4_4:81527020-81527039 | None:intergenic | 45.0% | |
| GGACAAATGTTGCGACTGTT+GGG | + | chr4_4:81527021-81527040 | None:intergenic | 45.0% | |
| TGGACAAATGTTGCGACTGT+TGG | + | chr4_4:81527022-81527041 | None:intergenic | 45.0% | |
| AGTCGCAACATTTGTCCATG+AGG | - | chr4_4:81527024-81527043 | Msa0708080:intron | 45.0% | |
| GATTTGAACTTTGTCCCACG+AGG | + | chr4_4:81527083-81527102 | None:intergenic | 45.0% | |
| GGGACAAAGTTCAAATCCTC+CGG | - | chr4_4:81527086-81527105 | Msa0708080:intron | 45.0% | |
| GGACAAAGTTCAAATCCTCC+GGG | - | chr4_4:81527087-81527106 | Msa0708080:intron | 45.0% | |
| AGGAATGCACCATGTACCAT+GGG | + | chr4_4:81527929-81527948 | None:intergenic | 45.0% | |
| AAGGAATGCACCATGTACCA+TGG | + | chr4_4:81527930-81527949 | None:intergenic | 45.0% | |
| CTGGTCCAGAAATTAACAGG+AGG | - | chr4_4:81528032-81528051 | Msa0708080:intron | 45.0% | |
| AGACTTCATTCCAAGCAGTG+TGG | - | chr4_4:81528103-81528122 | Msa0708080:intron | 45.0% | |
| TGCAGAGCTGTTGATGTATC+CGG | - | chr4_4:81528161-81528180 | Msa0708080:intron | 45.0% | |
| TGCAGATGTTTCATCTTCCC+CGG | + | chr4_4:81528183-81528202 | None:intergenic | 45.0% | |
| ATCAATGGCCGAGTTCAATG+AGG | - | chr4_4:81528211-81528230 | Msa0708080:intron | 45.0% | |
| TGCTTGAGCCTCATTGAACT+CGG | + | chr4_4:81528222-81528241 | None:intergenic | 45.0% | |
| CTGCTGAAGCCAAGAATGTT+AGG | - | chr4_4:81528291-81528310 | Msa0708080:intron | 45.0% | |
| TGATGTTGTGTCACACCAAG+AGG | - | chr4_4:81528507-81528526 | Msa0708080:intron | 45.0% | |
| GACTTCTCAACAGTTCCTCT+TGG | + | chr4_4:81528525-81528544 | None:intergenic | 45.0% | |
| AGCGTATGGCTGTTTGGTAA+TGG | - | chr4_4:81528649-81528668 | Msa0708080:intron | 45.0% | |
| TGAAGTCAGGCATGACATCA+AGG | - | chr4_4:81528710-81528729 | Msa0708080:intron | 45.0% | |
| GAAGTCAGGCATGACATCAA+GGG | - | chr4_4:81528711-81528730 | Msa0708080:intron | 45.0% | |
| CGGACTGTTCATGTATCTAG+AGG | + | chr4_4:81528994-81529013 | None:intergenic | 45.0% | |
| GATTCATCTATGGTTCCAGC+TGG | - | chr4_4:81529055-81529074 | Msa0708080:intron | 45.0% | |
| TTCCAGCTGGTCCTGATAAT+AGG | - | chr4_4:81529068-81529087 | Msa0708080:intron | 45.0% | |
| AGCTGGTCCTGATAATAGGA+GGG | - | chr4_4:81529072-81529091 | Msa0708080:intron | 45.0% | |
| AGAACGTGTTATGTTCCGTG+TGG | - | chr4_4:81529111-81529130 | Msa0708080:intron | 45.0% | |
| ! | CTGAAGGTGTACTTGCAACT+TGG | - | chr4_4:81529145-81529164 | Msa0708080:intron | 45.0% |
| ! | TGAAACCTCGTGTCGTTGAA+TGG | + | chr4_4:81529523-81529542 | None:intergenic | 45.0% |
| GCTGGTTGTTTGTAGAGTGA+AGG | - | chr4_4:81529621-81529640 | Msa0708080:CDS | 45.0% | |
| AGTGAAGGTGAAGAATCTGG+TGG | - | chr4_4:81529636-81529655 | Msa0708080:CDS | 45.0% | |
| GGTGAAGAATCTGGTGGTAA+CGG | - | chr4_4:81529642-81529661 | Msa0708080:CDS | 45.0% | |
| !! | AATGATGGGTGTCCTCTAGA+AGG | - | chr4_4:81529730-81529749 | Msa0708080:CDS | 45.0% |
| ACCGAATCCTTCTCCGATTC+CGG | - | chr4_4:81523132-81523151 | Msa0708080:CDS | 50.0% | |
| TCCGGAATCGGAGAAGGATT+CGG | + | chr4_4:81523136-81523155 | None:intergenic | 50.0% | |
| GGAAGTAACGGCGCATTGTT+TGG | - | chr4_4:81523307-81523326 | Msa0708080:intron | 50.0% | |
| AACGCGTGAGGCCAGATTTA+GGG | + | chr4_4:81523394-81523413 | None:intergenic | 50.0% | |
| ! | TTTGAAGCACAGAACGCGTG+AGG | + | chr4_4:81523406-81523425 | None:intergenic | 50.0% |
| TCTTGCTCATCACATCGTGC+AGG | - | chr4_4:81523499-81523518 | Msa0708080:CDS | 50.0% | |
| ! | GTCGCGAAACATGTATTGGC+AGG | - | chr4_4:81524217-81524236 | Msa0708080:intron | 50.0% |
| ! | TGTATTGGCAGGCTTGCATG+AGG | - | chr4_4:81524228-81524247 | Msa0708080:intron | 50.0% |
| ! | CCAATGACTTGCACGTACAG+AGG | + | chr4_4:81524262-81524281 | None:intergenic | 50.0% |
| CCTCTGTACGTGCAAGTCAT+TGG | - | chr4_4:81524259-81524278 | Msa0708080:intron | 50.0% | |
| TGCCAGAATTGATGTGCACC+TGG | + | chr4_4:81524781-81524800 | None:intergenic | 50.0% | |
| AGATTTGTACAGCGGCGAAC+TGG | - | chr4_4:81525345-81525364 | Msa0708080:intron | 50.0% | |
| !! | GGAGGTCAGGAAGTGTTATG+TGG | - | chr4_4:81525382-81525401 | Msa0708080:intron | 50.0% |
| !! | TCCCCGTTTTGTTGACTGGT+GGG | - | chr4_4:81525563-81525582 | Msa0708080:intron | 50.0% |
| ACCCCACCAGTCAACAAAAC+GGG | + | chr4_4:81525568-81525587 | None:intergenic | 50.0% | |
| ! | TTTGTTGACTGGTGGGGTAC+AGG | - | chr4_4:81525570-81525589 | Msa0708080:intron | 50.0% |
| GGGAGCAAATCAGCATCAAC+GGG | + | chr4_4:81525603-81525622 | None:intergenic | 50.0% | |
| GGGGAGCAAATCAGCATCAA+CGG | + | chr4_4:81525604-81525623 | None:intergenic | 50.0% | |
| TCTGTAACCGGGAATCGTAG+GGG | + | chr4_4:81525625-81525644 | None:intergenic | 50.0% | |
| GTTCTGTAACCGGGAATCGT+AGG | + | chr4_4:81525627-81525646 | None:intergenic | 50.0% | |
| CTAAGCGGAGTTCTGTAACC+GGG | + | chr4_4:81525636-81525655 | None:intergenic | 50.0% | |
| CCTAAGCGGAGTTCTGTAAC+CGG | + | chr4_4:81525637-81525656 | None:intergenic | 50.0% | |
| ! | TGCTCATCGTTGGTAAGTCG+CGG | + | chr4_4:81525681-81525700 | None:intergenic | 50.0% |
| TCACCCAGGGCAAAATGACA+AGG | + | chr4_4:81525735-81525754 | None:intergenic | 50.0% | |
| ! | GGTTGAGTTTTGCTCACCCA+GGG | + | chr4_4:81525748-81525767 | None:intergenic | 50.0% |
| !! | ACTGATGGCTCTGGAACTGA+AGG | - | chr4_4:81525944-81525963 | Msa0708080:intron | 50.0% |
| ! | CCAAGCCTTTTCCCACTAAG+TGG | + | chr4_4:81526199-81526218 | None:intergenic | 50.0% |
| CCACTTAGTGGGAAAAGGCT+TGG | - | chr4_4:81526196-81526215 | Msa0708080:intron | 50.0% | |
| ! | CCAATTTGGCGGATACTCTG+GGG | + | chr4_4:81526279-81526298 | None:intergenic | 50.0% |
| GTCAAGCTCTTACCACTGAG+CGG | + | chr4_4:81527053-81527072 | None:intergenic | 50.0% | |
| AATGCACCATGTACCATGGG+GGG | + | chr4_4:81527926-81527945 | None:intergenic | 50.0% | |
| GAATGCACCATGTACCATGG+GGG | + | chr4_4:81527927-81527946 | None:intergenic | 50.0% | |
| GGAATGCACCATGTACCATG+GGG | + | chr4_4:81527928-81527947 | None:intergenic | 50.0% | |
| GTGGCATGACAAGGGAACAA+AGG | + | chr4_4:81527949-81527968 | None:intergenic | 50.0% | |
| !! | CAGGAGGTACCTTACTGCTA+AGG | - | chr4_4:81528048-81528067 | Msa0708080:intron | 50.0% |
| AAAATGGCAGCCACACTGCT+TGG | + | chr4_4:81528116-81528135 | None:intergenic | 50.0% | |
| GCAGAGCTGTTGATGTATCC+GGG | - | chr4_4:81528162-81528181 | Msa0708080:intron | 50.0% | |
| CAGAGCTGTTGATGTATCCG+GGG | - | chr4_4:81528163-81528182 | Msa0708080:intron | 50.0% | |
| GATGAAACATCTGCACGAGC+AGG | - | chr4_4:81528188-81528207 | Msa0708080:intron | 50.0% | |
| ATCTGCACGAGCAGGATCAA+TGG | - | chr4_4:81528196-81528215 | Msa0708080:intron | 50.0% | |
| AATGAGGCTCAAGCACTCTG+TGG | - | chr4_4:81528227-81528246 | Msa0708080:intron | 50.0% | |
| AGTTGGAGCGTATGGCTGTT+TGG | - | chr4_4:81528643-81528662 | Msa0708080:intron | 50.0% | |
| CTCCTATTATCAGGACCAGC+TGG | + | chr4_4:81529073-81529092 | None:intergenic | 50.0% | |
| CAGCTGGTCCTGATAATAGG+AGG | - | chr4_4:81529071-81529090 | Msa0708080:intron | 50.0% | |
| CGTGTTATGTTCCGTGTGGT+TGG | - | chr4_4:81529115-81529134 | Msa0708080:intron | 50.0% | |
| GGCCCATTACTCTACGACAT+AGG | - | chr4_4:81529457-81529476 | Msa0708080:CDS | 50.0% | |
| !! | GAAGAATCTGGTGGTAACGG+TGG | - | chr4_4:81529645-81529664 | Msa0708080:CDS | 50.0% |
| ! | ATTCGGTCGATGGCGTTGGA+TGG | + | chr4_4:81523119-81523138 | None:intergenic | 55.0% |
| ! | AAGGATTCGGTCGATGGCGT+TGG | + | chr4_4:81523123-81523142 | None:intergenic | 55.0% |
| ! | TCGGAGAAGGATTCGGTCGA+TGG | + | chr4_4:81523129-81523148 | None:intergenic | 55.0% |
| GGTCGGAGCGAATCCATTCA+CGG | + | chr4_4:81523220-81523239 | None:intergenic | 55.0% | |
| ATGGATTCGCTCCGACCAGT+CGG | - | chr4_4:81523223-81523242 | Msa0708080:intron | 55.0% | |
| CGACGGAATAACCGACTGGT+CGG | + | chr4_4:81523237-81523256 | None:intergenic | 55.0% | |
| CGACCAGTCGGTTATTCCGT+CGG | - | chr4_4:81523235-81523254 | Msa0708080:intron | 55.0% | |
| TCTCCGACGGAATAACCGAC+TGG | + | chr4_4:81523241-81523260 | None:intergenic | 55.0% | |
| GTCGGTTATTCCGTCGGAGA+AGG | - | chr4_4:81523241-81523260 | Msa0708080:intron | 55.0% | |
| GGTTATTCCGTCGGAGAAGG+AGG | - | chr4_4:81523244-81523263 | Msa0708080:intron | 55.0% | |
| TATTCCGTCGGAGAAGGAGG+TGG | - | chr4_4:81523247-81523266 | Msa0708080:intron | 55.0% | |
| TGTTCCACCTCCTTCTCCGA+CGG | + | chr4_4:81523254-81523273 | None:intergenic | 55.0% | |
| GAACGCGTGAGGCCAGATTT+AGG | + | chr4_4:81523395-81523414 | None:intergenic | 55.0% | |
| GCGACCAACAGGATGCACTT+TGG | + | chr4_4:81524202-81524221 | None:intergenic | 55.0% | |
| TTTGTACAGCGGCGAACTGG+AGG | - | chr4_4:81525348-81525367 | Msa0708080:intron | 55.0% | |
| TCCTCTGGCGTCATGTTCTC+AGG | + | chr4_4:81525510-81525529 | None:intergenic | 55.0% | |
| TGAGAACATGACGCCAGAGG+AGG | - | chr4_4:81525509-81525528 | Msa0708080:intron | 55.0% | |
| CAGAGGAGGCAGAGTTCAAC+CGG | - | chr4_4:81525523-81525542 | Msa0708080:intron | 55.0% | |
| !! | TCGGTCCCCGTTTTGTTGAC+TGG | - | chr4_4:81525559-81525578 | Msa0708080:intron | 55.0% |
| !! | GTCCCCGTTTTGTTGACTGG+TGG | - | chr4_4:81525562-81525581 | Msa0708080:intron | 55.0% |
| CCCCACCAGTCAACAAAACG+GGG | + | chr4_4:81525567-81525586 | None:intergenic | 55.0% | |
| !! | CCCCGTTTTGTTGACTGGTG+GGG | - | chr4_4:81525564-81525583 | Msa0708080:intron | 55.0% |
| TGTAACCGGGAATCGTAGGG+GGG | + | chr4_4:81525623-81525642 | None:intergenic | 55.0% | |
| CTGTAACCGGGAATCGTAGG+GGG | + | chr4_4:81525624-81525643 | None:intergenic | 55.0% | |
| CCGGTTACAGAACTCCGCTT+AGG | - | chr4_4:81525634-81525653 | Msa0708080:intron | 55.0% | |
| AGTCGCGGATGCATTCTAGC+AGG | + | chr4_4:81525666-81525685 | None:intergenic | 55.0% | |
| ! | CGGTTGAGTTTTGCTCACCC+AGG | + | chr4_4:81525749-81525768 | None:intergenic | 55.0% |
| ! | CCCCAGAGTATCCGCCAAAT+TGG | - | chr4_4:81526276-81526295 | Msa0708080:intron | 55.0% |
| ATGCACCATGTACCATGGGG+GGG | + | chr4_4:81527925-81527944 | None:intergenic | 55.0% | |
| AGGCTCAAGCACTCTGTGGA+AGG | - | chr4_4:81528231-81528250 | Msa0708080:intron | 55.0% | |
| GGCTCAAGCACTCTGTGGAA+GGG | - | chr4_4:81528232-81528251 | Msa0708080:intron | 55.0% | |
| !! | GAATCTGGTGGTAACGGTGG+TGG | - | chr4_4:81529648-81529667 | Msa0708080:CDS | 55.0% |
| GCCTGAGAACATGACGCCAG+AGG | - | chr4_4:81525506-81525525 | Msa0708080:intron | 60.0% | |
| CGGTTGAACTCTGCCTCCTC+TGG | + | chr4_4:81525525-81525544 | None:intergenic | 60.0% | |
| TTGCTCCCCCCTACGATTCC+CGG | - | chr4_4:81525615-81525634 | Msa0708080:intron | 60.0% | |
| CTGGGTCACTCATTGTGGGG+CGG | - | chr4_4:81526722-81526741 | Msa0708080:intron | 60.0% | |
| GTCACTCATTGTGGGGCGGA+GGG | - | chr4_4:81526726-81526745 | Msa0708080:intron | 60.0% | |
| ! | TCCATGAGGTGTCCGCTCAG+TGG | - | chr4_4:81527038-81527057 | Msa0708080:intron | 60.0% |
| ACCACTGAGCGGACACCTCA+TGG | + | chr4_4:81527042-81527061 | None:intergenic | 60.0% | |
| !! | ATGTACCATGGGGGGGTGCT+GGG | + | chr4_4:81527918-81527937 | None:intergenic | 60.0% |
| ! | CGGTCGATGGCGTTGGATGG+TGG | + | chr4_4:81523116-81523135 | None:intergenic | 65.0% |
| GGTCACTCATTGTGGGGCGG+AGG | - | chr4_4:81526725-81526744 | Msa0708080:intron | 65.0% | |
| ! | CATGTACCATGGGGGGGTGC+TGG | + | chr4_4:81527919-81527938 | None:intergenic | 65.0% |
| CAGCACCCCCCCATGGTACA+TGG | - | chr4_4:81527917-81527936 | Msa0708080:intron | 65.0% | |
| TCCTTCCCAGCACCCCCCCA+TGG | - | chr4_4:81527910-81527929 | Msa0708080:intron | 70.0% | |
| !! | ACCATGGGGGGGTGCTGGGA+AGG | + | chr4_4:81527914-81527933 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 81522915 | 81529931 | 81522915 | ID=Msa0708080;Name=Msa0708080 |
| chr4_4 | mRNA | 81522915 | 81529931 | 81522915 | ID=Msa0708080-mRNA-1;Parent=Msa0708080;Name=Msa0708080-mRNA-1;_AED=0.10;_eAED=0.10;_QI=57|1|1|1|1|1|7|197|646 |
| chr4_4 | exon | 81522915 | 81523210 | 81522915 | ID=Msa0708080-mRNA-1:exon:26722;Parent=Msa0708080-mRNA-1 |
| chr4_4 | exon | 81523310 | 81523602 | 81523310 | ID=Msa0708080-mRNA-1:exon:26721;Parent=Msa0708080-mRNA-1 |
| chr4_4 | exon | 81523680 | 81523848 | 81523680 | ID=Msa0708080-mRNA-1:exon:26720;Parent=Msa0708080-mRNA-1 |
| chr4_4 | exon | 81524500 | 81524805 | 81524500 | ID=Msa0708080-mRNA-1:exon:26719;Parent=Msa0708080-mRNA-1 |
| chr4_4 | exon | 81526881 | 81527011 | 81526881 | ID=Msa0708080-mRNA-1:exon:26718;Parent=Msa0708080-mRNA-1 |
| chr4_4 | exon | 81527096 | 81527489 | 81527096 | ID=Msa0708080-mRNA-1:exon:26717;Parent=Msa0708080-mRNA-1 |
| chr4_4 | exon | 81529326 | 81529931 | 81529326 | ID=Msa0708080-mRNA-1:exon:26716;Parent=Msa0708080-mRNA-1 |
| chr4_4 | five_prime_UTR | 81529875 | 81529931 | 81529875 | ID=Msa0708080-mRNA-1:five_prime_utr;Parent=Msa0708080-mRNA-1 |
| chr4_4 | CDS | 81529326 | 81529874 | 81529326 | ID=Msa0708080-mRNA-1:cds;Parent=Msa0708080-mRNA-1 |
| chr4_4 | CDS | 81527096 | 81527489 | 81527096 | ID=Msa0708080-mRNA-1:cds;Parent=Msa0708080-mRNA-1 |
| chr4_4 | CDS | 81526881 | 81527011 | 81526881 | ID=Msa0708080-mRNA-1:cds;Parent=Msa0708080-mRNA-1 |
| chr4_4 | CDS | 81524500 | 81524805 | 81524500 | ID=Msa0708080-mRNA-1:cds;Parent=Msa0708080-mRNA-1 |
| chr4_4 | CDS | 81523680 | 81523848 | 81523680 | ID=Msa0708080-mRNA-1:cds;Parent=Msa0708080-mRNA-1 |
| chr4_4 | CDS | 81523310 | 81523602 | 81523310 | ID=Msa0708080-mRNA-1:cds;Parent=Msa0708080-mRNA-1 |
| chr4_4 | CDS | 81523112 | 81523210 | 81523112 | ID=Msa0708080-mRNA-1:cds;Parent=Msa0708080-mRNA-1 |
| chr4_4 | three_prime_UTR | 81522915 | 81523111 | 81522915 | ID=Msa0708080-mRNA-1:three_prime_utr;Parent=Msa0708080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
