AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0638690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638690 MtrunA17_Chr4g0050151 98.204 334 6 0 4 337 202 535 0.0 677
Msa0638690 MtrunA17_Chr2g0279401 84.685 333 50 1 4 336 209 540 0.0 598
Msa0638690 MtrunA17_Chr2g0327771 72.115 312 86 1 4 314 193 504 7.51e-168 477
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638690 AT5G64300.1 87.937 315 38 0 3 317 215 529 0.0 590
Msa0638690 AT5G59750.1 71.474 312 88 1 3 313 188 499 4.24e-168 478
Msa0638690 AT5G59750.2 71.474 312 88 1 3 313 222 533 9.81e-168 478
Msa0638690 AT2G22450.1 71.724 290 74 2 3 292 193 474 7.85e-151 433
Msa0638690 AT5G59750.3 71.654 254 71 1 3 255 188 441 2.07e-132 385

Find 184 sgRNAs with CRISPR-Local

Find 426 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGTTTGGGGAATAGGATTT+AGG 0.160264 4_3:+34213871 None:intergenic
GGAAACCAAACGTGTGAAAA+TGG 0.179642 4_3:-34208727 Msa0638690:CDS
ACCTGTGGTGGTACCATATT+TGG 0.201373 4_3:+34211916 None:intergenic
TATCTATTGCTGACTTAATA+AGG 0.228563 4_3:-34211619 Msa0638690:intron
GGTTATGGTTTGTCCATTTC+AGG 0.231937 4_3:-34208798 Msa0638690:CDS
AGAGAAGAAGCCATTTAGTT+TGG 0.270647 4_3:+34213856 None:intergenic
ACATAATTTGTGTATCTTAC+AGG 0.271505 4_3:+34208607 None:intergenic
TTATTTATTTATTGAGAGTT+TGG 0.288189 4_3:+34213911 None:intergenic
GTTGATCTTGCAGTACTTGC+TGG 0.298152 4_3:-34211746 Msa0638690:CDS
AGTTTGGGGAATAGGATTTA+GGG 0.303586 4_3:+34213872 None:intergenic
ATCCTATTCCCCAAACTAAA+TGG 0.305424 4_3:-34213866 Msa0638690:five_prime_UTR
GAGAAGAAGCCATTTAGTTT+GGG 0.305528 4_3:+34213857 None:intergenic
GTACCTTGTATAAGTGATTA+AGG 0.322113 4_3:-34208251 Msa0638690:three_prime_UTR
TGTCTCACAGGAGACATATT+TGG 0.327946 4_3:-34209312 Msa0638690:CDS
GAGATTAGAGCTTCCTTTGA+TGG 0.335212 4_3:-34212395 Msa0638690:five_prime_UTR
AGCCATTTAGTTTGGGGAAT+AGG 0.335852 4_3:+34213864 None:intergenic
CATTCACAGCTAACTGTTAT+AGG 0.336467 4_3:-34210611 Msa0638690:CDS
GGATAGGGCAACCACAGTTT+TGG 0.339372 4_3:-34211882 Msa0638690:CDS
CAATGGGATCCTACCTGAAA+TGG 0.346472 4_3:+34208785 None:intergenic
AAAATTTCAAATTGCTCAAT+GGG 0.352317 4_3:-34213084 Msa0638690:five_prime_UTR
ACTGGAATCATCAATATTAC+TGG 0.361001 4_3:+34208659 None:intergenic
CGTTCTGTGTTGTGTTGGAT+TGG 0.373220 4_3:+34213943 None:intergenic
TCTTGCAGTACTTGCTGGTT+TGG 0.375590 4_3:-34211741 Msa0638690:CDS
TATGTTGGGCTCAAAGGTTA+TGG 0.393304 4_3:-34208813 Msa0638690:CDS
GATTTAGGGTTTGAATGAAA+TGG 0.395767 4_3:+34213886 None:intergenic
CCTGTTGACTCAAGGGAGTA+TGG 0.400777 4_3:-34209099 Msa0638690:CDS
GGACATGAAGGAAGGGGTAT+TGG 0.405006 4_3:-34209201 Msa0638690:CDS
TTATTTAACAGGGTGACATT+GGG 0.414280 4_3:-34209371 Msa0638690:intron
AAATTGCTCAATGGGTTTAA+CGG 0.418543 4_3:-34213076 Msa0638690:five_prime_UTR
ATTGGTCTGGCAGGTATAGA+AGG 0.425872 4_3:-34210692 Msa0638690:intron
GCTCAGATTTGGCATTTGTT+CGG 0.426151 4_3:-34213024 Msa0638690:five_prime_UTR
TCCTTTGATGGTCAACAGTC+GGG 0.426635 4_3:-34212383 Msa0638690:five_prime_UTR
GTTAAAGCTGCGTTGACCTC+TGG 0.428144 4_3:-34212959 Msa0638690:five_prime_UTR
TTTATTGTGAAGCACGGAAC+TGG 0.428836 4_3:-34212454 Msa0638690:five_prime_UTR
AATAAATCACAAGTAGAATC+AGG 0.432760 4_3:+34208513 None:intergenic
TCATGTGCGTGGCTCAGATT+TGG 0.436104 4_3:-34213035 Msa0638690:five_prime_UTR
GAAGGAAGGGGTATTGGATT+GGG 0.436773 4_3:-34209195 Msa0638690:CDS
CCTGGGCGGTTGAAATCACT+TGG 0.436809 4_3:+34211836 None:intergenic
CTTATTTAACAGGGTGACAT+TGG 0.437054 4_3:-34209372 Msa0638690:intron
TTATGTGCCAGGAGCAGTAC+TGG 0.441984 4_3:+34208641 None:intergenic
TCTAATAATGGCAGCACAGT+TGG 0.442929 4_3:-34212497 Msa0638690:five_prime_UTR
TGAAGGAAGGGGTATTGGAT+TGG 0.444630 4_3:-34209196 Msa0638690:CDS
TGCGGTAGCGCTTGGAACAC+TGG 0.448752 4_3:-34212782 Msa0638690:five_prime_UTR
TTATTTATTGAGAGTTTGGT+TGG 0.452281 4_3:+34213915 None:intergenic
CAGGTGTGTCGGCTCAGGAT+AGG 0.455862 4_3:-34211898 Msa0638690:CDS
ATTATCTATTACACATTACA+TGG 0.458016 4_3:+34208420 None:intergenic
CCATACTCCCTTGAGTCAAC+AGG 0.462092 4_3:+34209099 None:intergenic
CACTTATCACAAATGAAAAC+AGG 0.465466 4_3:-34208758 Msa0638690:CDS
GAATTTAACAGCAAATTGAA+TGG 0.466315 4_3:-34208687 Msa0638690:CDS
CAACTTAATGCGGTAGCGCT+TGG 0.467840 4_3:-34212790 Msa0638690:five_prime_UTR
ATAGAATAGGTGAGGGGCTG+AGG 0.468263 4_3:-34208399 Msa0638690:three_prime_UTR
TGCTGCGTTCTGTGTTGTGT+TGG 0.469256 4_3:+34213938 None:intergenic
GGAGCAGATACAGCTCTAAC+AGG 0.470368 4_3:-34212760 Msa0638690:five_prime_UTR
AGGCAATCCCAACTCCTCAT+TGG 0.470707 4_3:+34209119 None:intergenic
GCAAAATATGTTGGGCTCAA+AGG 0.471659 4_3:-34208819 Msa0638690:CDS
AAACGAAGGAGATCTAATAA+TGG 0.473118 4_3:-34212509 Msa0638690:five_prime_UTR
AACAATCCGGCAAAATATGT+TGG 0.476857 4_3:-34208828 Msa0638690:CDS
AATTGTAATTGCAGATATTG+AGG 0.477500 4_3:-34208884 Msa0638690:intron
TCTGCAAACTGGCGAAGCTT+AGG 0.478958 4_3:+34211662 None:intergenic
AGGTGTGTCGGCTCAGGATA+GGG 0.482470 4_3:-34211897 Msa0638690:CDS
CTGAGGCTATTGAAGACATT+CGG 0.487102 4_3:-34212669 Msa0638690:five_prime_UTR
TGACAGTGGTATGTACAATT+TGG 0.488249 4_3:-34212327 Msa0638690:intron
GTGTGACTGCGGAAATCAAT+TGG 0.489196 4_3:-34209280 Msa0638690:CDS
AAATGAAAACAGGAGATACT+TGG 0.489544 4_3:-34208748 Msa0638690:CDS
GAAACCAAACGTGTGAAAAT+GGG 0.490915 4_3:-34208726 Msa0638690:CDS
CAGATTGAGGCTGCTGGCAG+AGG 0.491152 4_3:-34209243 Msa0638690:CDS
TGTAGAAGCCAATGAGGAGT+TGG 0.491158 4_3:-34209127 Msa0638690:CDS
TGCTTATAACCTACAGGATG+AGG 0.491407 4_3:-34209160 Msa0638690:CDS
TGTGTAATAGATAATAGAAT+AGG 0.492532 4_3:-34208412 Msa0638690:three_prime_UTR
AAGGAAGCTCTAATCTCTCC+AGG 0.494013 4_3:+34212401 None:intergenic
TTGTGATAAGTGATAACAAT+GGG 0.494880 4_3:+34208769 None:intergenic
CACCACAGGTGTGTCGGCTC+AGG 0.495943 4_3:-34211903 Msa0638690:CDS
GTTGGCAACACCTGAGGCTA+TGG 0.497594 4_3:-34212479 Msa0638690:five_prime_UTR
GTGAAAATGGGTCACATGTA+TGG 0.498935 4_3:-34208714 Msa0638690:CDS
GCCAAATATGGTACCACCAC+AGG 0.505213 4_3:-34211917 Msa0638690:CDS
ACAATCCGGCAAAATATGTT+GGG 0.506282 4_3:-34208827 Msa0638690:CDS
GACTCAAGGGAGTATGGAAT+TGG 0.510546 4_3:-34209093 Msa0638690:CDS
ATTGTAATTGCAGATATTGA+GGG 0.510691 4_3:-34208883 Msa0638690:intron
TGGGATTGCCTGTTGACTCA+AGG 0.511648 4_3:-34209107 Msa0638690:CDS
GATTCAGACAGTCCAACAAA+AGG 0.513016 4_3:-34212706 Msa0638690:five_prime_UTR
TTTAGCGGGAAAATATGGCC+TGG 0.513539 4_3:+34211818 None:intergenic
TAAAGGTGCTCTTTGTTGAA+AGG 0.514646 4_3:-34208212 Msa0638690:three_prime_UTR
TTAGCGGGAAAATATGGCCT+GGG 0.516577 4_3:+34211819 None:intergenic
TTCCTTTGATGGTCAACAGT+CGG 0.517538 4_3:-34212384 Msa0638690:five_prime_UTR
GGTGGTATCTTGAAGAGAGC+TGG 0.518284 4_3:-34211785 Msa0638690:CDS
ATTGCAGATATTGAGGGACT+TGG 0.519933 4_3:-34208877 Msa0638690:intron
CTTTGTTGAAAGGTATCTCG+TGG 0.520045 4_3:-34208202 Msa0638690:three_prime_UTR
GTCTTCAATAGCCTCAGGTA+TGG 0.520814 4_3:+34212675 None:intergenic
GGGATTGCCTGTTGACTCAA+GGG 0.524496 4_3:-34209106 Msa0638690:CDS
CTATAACAGTTAGCTGTGAA+TGG 0.526297 4_3:+34210612 None:intergenic
TCTTGCAATGCAACAGATTG+AGG 0.526543 4_3:-34209256 Msa0638690:CDS
GTAGAAGCCAATGAGGAGTT+GGG 0.529410 4_3:-34209126 Msa0638690:CDS
TGGTCGCGAGAGAGAGGGTG+TGG 0.529634 4_3:+34213825 None:intergenic
TCCCGACTGTTGACCATCAA+AGG 0.529835 4_3:+34212382 None:intergenic
TGTTGGATTGGATGAGAAGA+AGG 0.531310 4_3:+34213955 None:intergenic
TTGATTTCCGCAGTCACACC+TGG 0.532360 4_3:+34209284 None:intergenic
AATTTCTATACTGCTTCAGA+TGG 0.533048 4_3:-34208556 Msa0638690:three_prime_UTR
GCGGTAGCGCTTGGAACACT+GGG 0.540082 4_3:-34212781 Msa0638690:five_prime_UTR
GGCTGCTGGCAGAGGTGTGT+TGG 0.543552 4_3:-34209235 Msa0638690:CDS
GGAGCATATTGCGATGGTAA+AGG 0.544393 4_3:-34210571 Msa0638690:intron
AAGCATGAAAGAGGAAGACC+TGG 0.546167 4_3:-34212419 Msa0638690:five_prime_UTR
CGAATGTCTTCAATAGCCTC+AGG 0.546934 4_3:+34212670 None:intergenic
GAAGCTAATGACAAACAATC+CGG 0.547961 4_3:-34208841 Msa0638690:CDS
GCTTCGTGCTTATAACCTAC+AGG 0.549079 4_3:-34209166 Msa0638690:CDS
TGCACTAATACCAACAATGT+GGG 0.551549 4_3:-34210637 Msa0638690:CDS
GATGATTCCAGTACTGCTCC+TGG 0.554163 4_3:-34208648 Msa0638690:CDS
ATGGTTTGTCCATTTCAGGT+AGG 0.561182 4_3:-34208794 Msa0638690:CDS
ACAATAAAAGCCATAGCCTC+AGG 0.561239 4_3:+34212469 None:intergenic
TCTTCGAGGACATGAAGGAA+GGG 0.561452 4_3:-34209208 Msa0638690:CDS
ATGGATGTGATGTTCTTGTG+AGG 0.562152 4_3:-34209347 Msa0638690:CDS
ATTAGTACTTCAGATGGTAG+TGG 0.563625 4_3:-34212554 Msa0638690:intron
ATGCAACAGATTGAGGCTGC+TGG 0.565430 4_3:-34209249 Msa0638690:CDS
GAGACATATTTGGATCTGCC+AGG 0.566429 4_3:-34209302 Msa0638690:CDS
CCAAGTGATTTCAACCGCCC+AGG 0.570750 4_3:-34211836 Msa0638690:CDS
GGAGTATGGAATTGGTGCAC+AGG 0.571226 4_3:-34209085 Msa0638690:intron
TAACAGGGTGACATTGGGGA+TGG 0.572072 4_3:-34209366 Msa0638690:intron
TTGCAGATATTGAGGGACTT+GGG 0.572398 4_3:-34208876 Msa0638690:intron
CACCCTCTCTCTCGCGACCA+CGG 0.572671 4_3:-34213822 Msa0638690:intron
TGACCGTGGTCGCGAGAGAG+AGG 0.574315 4_3:+34213819 None:intergenic
GCACTAATACCAACAATGTG+GGG 0.575469 4_3:-34210636 Msa0638690:CDS
AGTTTGTATAAGCATGAAAG+AGG 0.575891 4_3:-34212428 Msa0638690:five_prime_UTR
GGTTATAAGCACGAAGCTTG+TGG 0.577439 4_3:+34209172 None:intergenic
ATCTTCGAGGACATGAAGGA+AGG 0.578424 4_3:-34209209 Msa0638690:CDS
TGTCACAAAACAGAAGAGGA+AGG 0.578447 4_3:-34208587 Msa0638690:three_prime_UTR
CATACCGCATTGCGACATGA+AGG 0.581456 4_3:+34212986 None:intergenic
ACCTCACACAGAACTGCCAC+AGG 0.581651 4_3:+34211716 None:intergenic
TAGAATAGGTGAGGGGCTGA+GGG 0.582487 4_3:-34208398 Msa0638690:three_prime_UTR
AGAAGAAGCCATTTAGTTTG+GGG 0.582512 4_3:+34213858 None:intergenic
TACAGCATTCACTGTGACAG+TGG 0.582981 4_3:-34212341 Msa0638690:five_prime_UTR
AATGGGTCACATGTATGGCT+TGG 0.585495 4_3:-34208709 Msa0638690:CDS
TGTGAGGTTGTAGATGATGA+TGG 0.585772 4_3:-34211701 Msa0638690:CDS
CTTCGAGGACATGAAGGAAG+GGG 0.588755 4_3:-34209207 Msa0638690:CDS
ATTATGTCACAAAACAGAAG+AGG 0.589902 4_3:-34208591 Msa0638690:three_prime_UTR
CTGTCACAGTGAATGCTGTA+CGG 0.591136 4_3:+34212344 None:intergenic
ACTTGCTGGTTTGGATCCTG+TGG 0.591421 4_3:-34211732 Msa0638690:CDS
ATAGATAATAGAATAGGTGA+GGG 0.591575 4_3:-34208406 Msa0638690:three_prime_UTR
TAACCTACAGGATGAGGGAA+GGG 0.594297 4_3:-34209154 Msa0638690:CDS
GATACAGCTCTAACAGGCAG+TGG 0.594402 4_3:-34212754 Msa0638690:five_prime_UTR
GGTGTGTTGGTATATCTTCG+AGG 0.595300 4_3:-34209222 Msa0638690:CDS
GATAAACTAGTGGAACGTGC+TGG 0.595479 4_3:-34210663 Msa0638690:CDS
AAGGAAGAGAGATAAACTAG+TGG 0.595527 4_3:-34210673 Msa0638690:CDS
GCTATTGAAGACATTCGGAA+TGG 0.596453 4_3:-34212664 Msa0638690:five_prime_UTR
TAGTTTCATTATACACGAGT+GGG 0.596731 4_3:-34208287 Msa0638690:three_prime_UTR
TGAAGACATTCGGAATGGAA+AGG 0.600427 4_3:-34212659 Msa0638690:intron
GTCACAAAACAGAAGAGGAA+GGG 0.601375 4_3:-34208586 Msa0638690:three_prime_UTR
AATAGATAATAGAATAGGTG+AGG 0.601516 4_3:-34208407 Msa0638690:three_prime_UTR
GCTTATAACCTACAGGATGA+GGG 0.601860 4_3:-34209159 Msa0638690:CDS
TATTTAACAGGGTGACATTG+GGG 0.607649 4_3:-34209370 Msa0638690:intron
TATCCCTTCCCTCATCCTGT+AGG 0.610379 4_3:+34209151 None:intergenic
GACCGTGGTCGCGAGAGAGA+GGG 0.612037 4_3:+34213820 None:intergenic
GTACACTCAGAGTGTCTCAC+AGG 0.612117 4_3:-34209324 Msa0638690:CDS
ATCCTGAGCCGACACACCTG+TGG 0.612282 4_3:+34211901 None:intergenic
GTATATCTTCGAGGACATGA+AGG 0.613709 4_3:-34209213 Msa0638690:CDS
ATACCGCATTGCGACATGAA+GGG 0.616657 4_3:+34212987 None:intergenic
TCCTGTGGCAGTTCTGTGTG+AGG 0.618636 4_3:-34211717 Msa0638690:CDS
CTGCACTAATACCAACAATG+TGG 0.619531 4_3:-34210638 Msa0638690:CDS
ATAGTTTCATTATACACGAG+TGG 0.620861 4_3:-34208288 Msa0638690:three_prime_UTR
TGGATTGGATGAGAAGAAGG+TGG 0.621203 4_3:+34213958 None:intergenic
AAGCTTAGGTAATCTAGCCA+TGG 0.622161 4_3:+34211676 None:intergenic
ATAACCTACAGGATGAGGGA+AGG 0.623311 4_3:-34209155 Msa0638690:CDS
TGGATGTGATGTTCTTGTGA+GGG 0.626484 4_3:-34209346 Msa0638690:CDS
TGACTTCTGTAGAAAACTAG+AGG 0.627964 4_3:-34208323 Msa0638690:three_prime_UTR
TTCCCGCTAAAATACAGGGA+AGG 0.631313 4_3:-34211806 Msa0638690:CDS
TGGTACCACCACAGGTGTGT+CGG 0.632234 4_3:-34211909 Msa0638690:CDS
TGTAGATGATGATGGTTCCA+TGG 0.633135 4_3:-34211693 Msa0638690:CDS
CCGCTAAAATACAGGGAAGG+TGG 0.634097 4_3:-34211803 Msa0638690:CDS
CCGTCTATGATTCATGTGCG+TGG 0.635896 4_3:-34213046 Msa0638690:five_prime_UTR
CTGAGCCGACACACCTGTGG+TGG 0.636032 4_3:+34211904 None:intergenic
GGTGGAATGCTCAAAGATGT+TGG 0.637271 4_3:+34213976 None:intergenic
GCACCTTAATCACTTATACA+AGG 0.639090 4_3:+34208248 None:intergenic
AGCACAGTTGGCAACACCTG+AGG 0.640668 4_3:-34212485 Msa0638690:five_prime_UTR
CACTAATACCAACAATGTGG+GGG 0.642333 4_3:-34210635 Msa0638690:CDS
TGGGATGGAGCATATTGCGA+TGG 0.648423 4_3:-34210577 Msa0638690:CDS
CCACGCACATGAATCATAGA+CGG 0.649929 4_3:+34213046 None:intergenic
GACGAGGACAGAGAAAACGA+AGG 0.678938 4_3:-34212523 Msa0638690:five_prime_UTR
GGATACTGTAGAAGCCAATG+AGG 0.679133 4_3:-34209133 Msa0638690:CDS
TGAATCAGCACAACTTAATG+CGG 0.679998 4_3:-34212800 Msa0638690:five_prime_UTR
GCGGGAAAATATGGCCTGGG+CGG 0.682425 4_3:+34211822 None:intergenic
GGTAGTGGTTGTAGATGACG+AGG 0.685375 4_3:-34212539 Msa0638690:five_prime_UTR
TTTGTGATAAGTGATAACAA+TGG 0.686821 4_3:+34208768 None:intergenic
GGATGCAAGGGCCAAAACTG+TGG 0.696804 4_3:+34211871 None:intergenic
TAGATAATAGAATAGGTGAG+GGG 0.707032 4_3:-34208405 Msa0638690:three_prime_UTR
GGATCTGCCAGGTGTGACTG+CGG 0.722494 4_3:-34209291 Msa0638690:CDS
ATTCCCTTCATGTCGCAATG+CGG 0.734754 4_3:-34212990 Msa0638690:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATCTTAATTTTTAGTTA+TGG - chr4_3:34208515-34208534 Msa0638690:three_prime_UTR 10.0%
!!! ATAATAATTTCTTATTTTTG+TGG - chr4_3:34209009-34209028 Msa0638690:intron 10.0%
!!! TAATAATTTCTTATTTTTGT+GGG - chr4_3:34209010-34209029 Msa0638690:intron 10.0%
!! TTTAATAAAATATAACTTTG+TGG - chr4_3:34210191-34210210 Msa0638690:intron 10.0%
!! CAATATATGATTAAAAAAAA+AGG + chr4_3:34211840-34211859 None:intergenic 10.0%
!!! GTTTTTTTTTTATTTTCTTT+AGG - chr4_3:34212615-34212634 Msa0638690:intron 10.0%
!! TTATTTATTTATTGAGAGTT+TGG + chr4_3:34208277-34208296 None:intergenic 15.0%
!! ATTAAAGCAGTTAAAAAATT+GGG + chr4_3:34208462-34208481 None:intergenic 15.0%
!! AATTAAAGCAGTTAAAAAAT+TGG + chr4_3:34208463-34208482 None:intergenic 15.0%
!! AACTAAAAATTAAGATAATC+TGG + chr4_3:34208514-34208533 None:intergenic 15.0%
!!! TTCTCTTTATTTGTATATAA+AGG - chr4_3:34210753-34210772 Msa0638690:intron 15.0%
!!! TCTCTTTATTTGTATATAAA+GGG - chr4_3:34210754-34210773 Msa0638690:intron 15.0%
!! TCTATATTGAACTATATATA+TGG - chr4_3:34211651-34211670 Msa0638690:CDS 15.0%
!!! TAACTTTGATTTTAACTAAA+TGG - chr4_3:34211705-34211724 Msa0638690:CDS 15.0%
!! AAAAAAAACTAAAGAAAGTA+TGG + chr4_3:34211947-34211966 None:intergenic 15.0%
!!! ATTCATTTTGAAAAAATTCA+GGG + chr4_3:34212365-34212384 None:intergenic 15.0%
!!! TATTCATTTTGAAAAAATTC+AGG + chr4_3:34212366-34212385 None:intergenic 15.0%
!!! ATCTTAATTTTTAGTTATGG+TGG - chr4_3:34208518-34208537 Msa0638690:three_prime_UTR 20.0%
!!! GTCATTTTTTAATTTACTAC+CGG + chr4_3:34208873-34208892 None:intergenic 20.0%
!! AAAAATTTCAAATTGCTCAA+TGG - chr4_3:34209100-34209119 Msa0638690:CDS 20.0%
!! AAAATTTCAAATTGCTCAAT+GGG - chr4_3:34209101-34209120 Msa0638690:CDS 20.0%
!!! GGTATTCTATATAAAAGTTT+TGG - chr4_3:34209570-34209589 Msa0638690:intron 20.0%
!! TAAATAATAAAAAGCTCATG+AGG - chr4_3:34210714-34210733 Msa0638690:intron 20.0%
!! AAATAATAAAAAGCTCATGA+GGG - chr4_3:34210715-34210734 Msa0638690:intron 20.0%
!!! AATTTTTGAAAGACAAATCA+CGG + chr4_3:34211099-34211118 None:intergenic 20.0%
!! AACTAGAAATTCAATCAATT+TGG - chr4_3:34211129-34211148 Msa0638690:intron 20.0%
!!! TAGGATTTCAATTTTTGTAA+TGG + chr4_3:34211272-34211291 None:intergenic 20.0%
!! ATATAAAGACAAAATAACCA+CGG + chr4_3:34211372-34211391 None:intergenic 20.0%
!! AAAATGAATAGAGAAGAAAA+AGG - chr4_3:34212376-34212395 Msa0638690:five_prime_UTR 20.0%
!! ATGCAAAAATGTTGAAAAAA+GGG + chr4_3:34212659-34212678 None:intergenic 20.0%
!! AATGCAAAAATGTTGAAAAA+AGG + chr4_3:34212660-34212679 None:intergenic 20.0%
!!! ATTTTACTGTATTCAATTCA+TGG - chr4_3:34213177-34213196 Msa0638690:intron 20.0%
!! ATTATCTATTACACATTACA+TGG + chr4_3:34213768-34213787 None:intergenic 20.0%
!! TGTGTAATAGATAATAGAAT+AGG - chr4_3:34213773-34213792 Msa0638690:intron 20.0%
! TTATTTATTGAGAGTTTGGT+TGG + chr4_3:34208273-34208292 None:intergenic 25.0%
! AACAAAACAGATAAGATAAG+AGG + chr4_3:34208683-34208702 None:intergenic 25.0%
! CATCTCCATAAAAGAAAATT+GGG + chr4_3:34208772-34208791 None:intergenic 25.0%
!! CAATTTTCTTTTATGGAGAT+GGG - chr4_3:34208771-34208790 Msa0638690:CDS 25.0%
!! ATTTTTGTGGGAATTATGTT+TGG - chr4_3:34209022-34209041 Msa0638690:intron 25.0%
! TGTCTCTTTCTATTCAATAT+AGG - chr4_3:34209071-34209090 Msa0638690:intron 25.0%
! GTCTCTTTCTATTCAATATA+GGG - chr4_3:34209072-34209091 Msa0638690:intron 25.0%
! GTACTAATGTCAGTTAATAA+CGG + chr4_3:34209619-34209638 None:intergenic 25.0%
!!! TGTTTTAGATGATGTAAGAA+TGG + chr4_3:34209938-34209957 None:intergenic 25.0%
!! ACTTATCAATGCAATTTTGT+AGG - chr4_3:34210243-34210262 Msa0638690:intron 25.0%
!!! TATCTATTGCTGACTTAATA+AGG - chr4_3:34210566-34210585 Msa0638690:intron 25.0%
!!! AGGGTTTTTAAGTAATTAGT+AGG - chr4_3:34210644-34210663 Msa0638690:CDS 25.0%
!!! GTTTTTAAGTAATTAGTAGG+TGG - chr4_3:34210647-34210666 Msa0638690:CDS 25.0%
! TTATTAGCAAGTTTCTCATT+AGG - chr4_3:34210689-34210708 Msa0638690:intron 25.0%
! TATTAGCAAGTTTCTCATTA+GGG - chr4_3:34210690-34210709 Msa0638690:intron 25.0%
! GATGACAATTAAGGAAAATA+GGG + chr4_3:34210928-34210947 None:intergenic 25.0%
! AGATGACAATTAAGGAAAAT+AGG + chr4_3:34210929-34210948 None:intergenic 25.0%
! GAAGAAATAGATGACAATTA+AGG + chr4_3:34210937-34210956 None:intergenic 25.0%
! ACAACAAAAATTGCATACAA+TGG + chr4_3:34211010-34211029 None:intergenic 25.0%
!!! TTGTATGCAATTTTTGTTGT+CGG - chr4_3:34211010-34211029 Msa0638690:intron 25.0%
!!! TCAATCAATTTGGTTTTTTG+TGG - chr4_3:34211139-34211158 Msa0638690:intron 25.0%
! TAATGGAAGATAAACAAGAT+AGG + chr4_3:34211291-34211310 None:intergenic 25.0%
! AAAAATTTAACTGCGCTTAA+AGG + chr4_3:34211349-34211368 None:intergenic 25.0%
! AAATTAGCTAAAGATGAATC+AGG + chr4_3:34211416-34211435 None:intergenic 25.0%
! AAAAGAAACAAAAAGAATCC+AGG + chr4_3:34211444-34211463 None:intergenic 25.0%
!!! GATTCTTTTTGTTTCTTTTC+TGG - chr4_3:34211445-34211464 Msa0638690:intron 25.0%
!!! ATTTATTTTTTTGACAGCCA+CGG + chr4_3:34211885-34211904 None:intergenic 25.0%
! TCATCAAACAAGTTATGTAT+TGG + chr4_3:34212061-34212080 None:intergenic 25.0%
!! GTAAGTAGTTCGATATTTTA+AGG + chr4_3:34212155-34212174 None:intergenic 25.0%
!! AATTCTCATTGACTGAAATT+GGG - chr4_3:34212554-34212573 Msa0638690:intron 25.0%
! TGCAAAAATGTTGAAAAAAG+GGG + chr4_3:34212658-34212677 None:intergenic 25.0%
!! TTTCAACATTTTTGCATTCA+AGG - chr4_3:34212662-34212681 Msa0638690:five_prime_UTR 25.0%
! ATTGAAAGGTTCAAGATAAT+TGG + chr4_3:34212731-34212750 None:intergenic 25.0%
!! TTGGACATTTCTTATTTAAC+AGG - chr4_3:34212803-34212822 Msa0638690:five_prime_UTR 25.0%
!! TGGACATTTCTTATTTAACA+GGG - chr4_3:34212804-34212823 Msa0638690:five_prime_UTR 25.0%
! TACATGATTATTAAGTTCAC+TGG - chr4_3:34213205-34213224 Msa0638690:intron 25.0%
!! AACATAGAACTAGATGTTTT+AGG - chr4_3:34213245-34213264 Msa0638690:intron 25.0%
! AATTGTAATTGCAGATATTG+AGG - chr4_3:34213301-34213320 Msa0638690:intron 25.0%
! ATTGTAATTGCAGATATTGA+GGG - chr4_3:34213302-34213321 Msa0638690:intron 25.0%
! TTGTGATAAGTGATAACAAT+GGG + chr4_3:34213419-34213438 None:intergenic 25.0%
! TTTGTGATAAGTGATAACAA+TGG + chr4_3:34213420-34213439 None:intergenic 25.0%
! GAATTTAACAGCAAATTGAA+TGG - chr4_3:34213498-34213517 Msa0638690:intron 25.0%
!! ACATAATTTGTGTATCTTAC+AGG + chr4_3:34213581-34213600 None:intergenic 25.0%
! AATAAATCACAAGTAGAATC+AGG + chr4_3:34213675-34213694 None:intergenic 25.0%
! AATAGATAATAGAATAGGTG+AGG - chr4_3:34213778-34213797 Msa0638690:intron 25.0%
! ATAGATAATAGAATAGGTGA+GGG - chr4_3:34213779-34213798 Msa0638690:intron 25.0%
! GATTTAGGGTTTGAATGAAA+TGG + chr4_3:34208302-34208321 None:intergenic 30.0%
TGAAATAGAACCTAAGAAAG+CGG + chr4_3:34208437-34208456 None:intergenic 30.0%
CATAAAAGAAAATTGGGCTA+AGG + chr4_3:34208766-34208785 None:intergenic 30.0%
! CTTAGCCCAATTTTCTTTTA+TGG - chr4_3:34208764-34208783 Msa0638690:CDS 30.0%
CCATCTCCATAAAAGAAAAT+TGG + chr4_3:34208773-34208792 None:intergenic 30.0%
! CCAATTTTCTTTTATGGAGA+TGG - chr4_3:34208770-34208789 Msa0638690:CDS 30.0%
CAAAATTGAATGTAATGTGC+TGG - chr4_3:34208892-34208911 Msa0638690:intron 30.0%
! AAATTGCTCAATGGGTTTAA+CGG - chr4_3:34209109-34209128 Msa0638690:CDS 30.0%
AGACCTAAAAAATGAAGATC+TGG - chr4_3:34209355-34209374 Msa0638690:CDS 30.0%
!!! CAACCAGATCTTCATTTTTT+AGG + chr4_3:34209361-34209380 None:intergenic 30.0%
CTAAAAAATGAAGATCTGGT+TGG - chr4_3:34209359-34209378 Msa0638690:CDS 30.0%
! GTTAATAACGGAAATCTAAG+TGG + chr4_3:34209607-34209626 None:intergenic 30.0%
AAACGAAGGAGATCTAATAA+TGG - chr4_3:34209676-34209695 Msa0638690:intron 30.0%
AGTTTGTATAAGCATGAAAG+AGG - chr4_3:34209757-34209776 Msa0638690:intron 30.0%
TATTTACTCACTTCATGTGA+TGG - chr4_3:34209959-34209978 Msa0638690:intron 30.0%
GTAAATGTCTGTTACATACT+GGG + chr4_3:34210092-34210111 None:intergenic 30.0%
AGTAAATGTCTGTTACATAC+TGG + chr4_3:34210093-34210112 None:intergenic 30.0%
! ATTTTGTAGGATGCCAAATA+TGG - chr4_3:34210256-34210275 Msa0638690:intron 30.0%
! TTTTGAATCTTTGGATGCAA+GGG + chr4_3:34210329-34210348 None:intergenic 30.0%
!!! ATCACTTGGTTTTGAATCTT+TGG + chr4_3:34210338-34210357 None:intergenic 30.0%
!!! TGTATTTTAGCGGGAAAATA+TGG + chr4_3:34210375-34210394 None:intergenic 30.0%
! ATATTTTCCCGCTAAAATAC+AGG - chr4_3:34210374-34210393 Msa0638690:intron 30.0%
! TATTTTCCCGCTAAAATACA+GGG - chr4_3:34210375-34210394 Msa0638690:intron 30.0%
CTTAAAAACCCTCTCATATT+GGG + chr4_3:34210636-34210655 None:intergenic 30.0%
ACTTAAAAACCCTCTCATAT+TGG + chr4_3:34210637-34210656 None:intergenic 30.0%
GTAATGACAATAGTAGTAGA+GGG + chr4_3:34210892-34210911 None:intergenic 30.0%
AGTAATGACAATAGTAGTAG+AGG + chr4_3:34210893-34210912 None:intergenic 30.0%
!! TGATAGCAACCTCTAAAATT+AGG + chr4_3:34211173-34211192 None:intergenic 30.0%
AGGTAAGGAACAAAAAATAG+AGG + chr4_3:34211396-34211415 None:intergenic 30.0%
! CTTTAGCTAATTTTTCTTCC+TGG - chr4_3:34211423-34211442 Msa0638690:intron 30.0%
!!! TGTTATAGGTCACTTTTAGA+TGG - chr4_3:34211588-34211607 Msa0638690:intron 30.0%
!!! GTTATAGGTCACTTTTAGAT+GGG - chr4_3:34211589-34211608 Msa0638690:intron 30.0%
ATCATATTGCTCTACCATAT+TGG + chr4_3:34211753-34211772 None:intergenic 30.0%
ATAAAAATTGAGTCACATCG+AGG - chr4_3:34211911-34211930 Msa0638690:CDS 30.0%
TAGCTTCTATTCCAAATGTA+GGG + chr4_3:34212087-34212106 None:intergenic 30.0%
TTAGCTTCTATTCCAAATGT+AGG + chr4_3:34212088-34212107 None:intergenic 30.0%
!! AGAATTTCAAGTTAACTCAC+GGG + chr4_3:34212244-34212263 None:intergenic 30.0%
!! CAGAATTTCAAGTTAACTCA+CGG + chr4_3:34212245-34212264 None:intergenic 30.0%
GATCTAGTCATCTTTCTATT+TGG - chr4_3:34212512-34212531 Msa0638690:five_prime_UTR 30.0%
! GAATTCTCATTGACTGAAAT+TGG - chr4_3:34212553-34212572 Msa0638690:intron 30.0%
AAACTGATCTTGTCAGTTAA+AGG + chr4_3:34212599-34212618 None:intergenic 30.0%
TTATTTAACAGGGTGACATT+GGG - chr4_3:34212814-34212833 Msa0638690:five_prime_UTR 30.0%
!! ACATCTAGTTCTATGTTGTA+TGG + chr4_3:34213242-34213261 None:intergenic 30.0%
CACTTATCACAAATGAAAAC+AGG - chr4_3:34213427-34213446 Msa0638690:intron 30.0%
AAATGAAAACAGGAGATACT+TGG - chr4_3:34213437-34213456 Msa0638690:intron 30.0%
ACTGGAATCATCAATATTAC+TGG + chr4_3:34213529-34213548 None:intergenic 30.0%
TGTATCTTACAGGAAAAAAC+AGG + chr4_3:34213571-34213590 None:intergenic 30.0%
ATTATGTCACAAAACAGAAG+AGG - chr4_3:34213594-34213613 Msa0638690:intron 30.0%
AATTTCTATACTGCTTCAGA+TGG - chr4_3:34213629-34213648 Msa0638690:intron 30.0%
GAAAAATCGTGCAAATGAAT+TGG + chr4_3:34213704-34213723 None:intergenic 30.0%
TAGATAATAGAATAGGTGAG+GGG - chr4_3:34213780-34213799 Msa0638690:intron 30.0%
ATAGTTTCATTATACACGAG+TGG - chr4_3:34213897-34213916 Msa0638690:five_prime_UTR 30.0%
TAGTTTCATTATACACGAGT+GGG - chr4_3:34213898-34213917 Msa0638690:five_prime_UTR 30.0%
GTACCTTGTATAAGTGATTA+AGG - chr4_3:34213934-34213953 Msa0638690:five_prime_UTR 30.0%
! GTGCATTTTTGTGACAATAA+AGG - chr4_3:34213956-34213975 Msa0638690:five_prime_UTR 30.0%
AGTTTGGGGAATAGGATTTA+GGG + chr4_3:34208316-34208335 None:intergenic 35.0%
TAGTTTGGGGAATAGGATTT+AGG + chr4_3:34208317-34208336 None:intergenic 35.0%
ATCCTATTCCCCAAACTAAA+TGG - chr4_3:34208319-34208338 Msa0638690:three_prime_UTR 35.0%
!! AGAAGAAGCCATTTAGTTTG+GGG + chr4_3:34208330-34208349 None:intergenic 35.0%
! GAGAAGAAGCCATTTAGTTT+GGG + chr4_3:34208331-34208350 None:intergenic 35.0%
AGAGAAGAAGCCATTTAGTT+TGG + chr4_3:34208332-34208351 None:intergenic 35.0%
GAAAAGAAGGAAGAAAGAGA+AGG + chr4_3:34208398-34208417 None:intergenic 35.0%
CAGAAGATAAAGGGAAAAGA+AGG + chr4_3:34208411-34208430 None:intergenic 35.0%
AAGCGGTTTCAGAAGATAAA+GGG + chr4_3:34208420-34208439 None:intergenic 35.0%
AAAGCGGTTTCAGAAGATAA+AGG + chr4_3:34208421-34208440 None:intergenic 35.0%
AGATAAGAGGAACAAAGTTG+TGG + chr4_3:34208670-34208689 None:intergenic 35.0%
GGAAAGTTTAGGTAAAGCTT+TGG + chr4_3:34208745-34208764 None:intergenic 35.0%
AATTGGGCTAAGGAAAGTTT+AGG + chr4_3:34208756-34208775 None:intergenic 35.0%
TGAATCAGCACAACTTAATG+CGG - chr4_3:34209385-34209404 Msa0638690:intron 35.0%
! ATGGAAGCAAAACCTTTTGT+TGG + chr4_3:34209494-34209513 None:intergenic 35.0%
! AATAACGGAAATCTAAGTGG+AGG + chr4_3:34209604-34209623 None:intergenic 35.0%
ACTGACATTAGTACTTCAGA+TGG - chr4_3:34209625-34209644 Msa0638690:intron 35.0%
ATTAGTACTTCAGATGGTAG+TGG - chr4_3:34209631-34209650 Msa0638690:intron 35.0%
! ATGGCTTTTATTGTGAAGCA+CGG - chr4_3:34209725-34209744 Msa0638690:intron 35.0%
TGACAGTGGTATGTACAATT+TGG - chr4_3:34209858-34209877 Msa0638690:intron 35.0%
TTCATGTGATGGTCAACTTT+AGG - chr4_3:34209970-34209989 Msa0638690:intron 35.0%
TCATGTGATGGTCAACTTTA+GGG - chr4_3:34209971-34209990 Msa0638690:intron 35.0%
!! GTTTTGAATCTTTGGATGCA+AGG + chr4_3:34210330-34210349 None:intergenic 35.0%
TGCGAAATACGTTGTATGTT+AGG - chr4_3:34210609-34210628 Msa0638690:CDS 35.0%
TAATTAGTAGGTGGCTAAGT+AGG - chr4_3:34210656-34210675 Msa0638690:CDS 35.0%
AATTAGTAGGTGGCTAAGTA+GGG - chr4_3:34210657-34210676 Msa0638690:CDS 35.0%
GGGAAATTCTTATGAGTTGT+AGG - chr4_3:34210774-34210793 Msa0638690:intron 35.0%
CTTATGAGTTGTAGGTTTGA+CGG - chr4_3:34210782-34210801 Msa0638690:intron 35.0%
! TGACGGAATATGTTTCTGTT+AGG - chr4_3:34210799-34210818 Msa0638690:intron 35.0%
!! TGTTACTGTTGGTTTATTGC+AGG - chr4_3:34210969-34210988 Msa0638690:intron 35.0%
TGTTTAATAACTGCAGTGCA+AGG + chr4_3:34211318-34211337 None:intergenic 35.0%
AGCTAAAGATGAATCAGGTA+AGG + chr4_3:34211411-34211430 None:intergenic 35.0%
AAGGAAGAGAGATAAACTAG+TGG - chr4_3:34211512-34211531 Msa0638690:intron 35.0%
TGCACTAATACCAACAATGT+GGG - chr4_3:34211548-34211567 Msa0638690:intron 35.0%
CTATAACAGTTAGCTGTGAA+TGG + chr4_3:34211576-34211595 None:intergenic 35.0%
CATTCACAGCTAACTGTTAT+AGG - chr4_3:34211574-34211593 Msa0638690:intron 35.0%
GCATAAGAGAGATACCAATA+TGG - chr4_3:34211736-34211755 Msa0638690:CDS 35.0%
ATTATTATTACACCCTCAGC+AGG + chr4_3:34211979-34211998 None:intergenic 35.0%
TTTGATGAAGTCCCTACATT+TGG - chr4_3:34212073-34212092 Msa0638690:intron 35.0%
TGGAATAGAAGCTAAGCTAT+TGG - chr4_3:34212093-34212112 Msa0638690:intron 35.0%
AAGCTAAGCTATTGGCATAA+AGG - chr4_3:34212101-34212120 Msa0638690:intron 35.0%
!!! ATTTTAAGGTGCCAATCCTA+GGG + chr4_3:34212141-34212160 None:intergenic 35.0%
!!! TATTTTAAGGTGCCAATCCT+AGG + chr4_3:34212142-34212161 None:intergenic 35.0%
AGTCCCAAAAAATCTCAGAT+AGG - chr4_3:34212203-34212222 Msa0638690:intron 35.0%
GTCCCAAAAAATCTCAGATA+GGG - chr4_3:34212204-34212223 Msa0638690:intron 35.0%
TCCCAAAAAATCTCAGATAG+GGG - chr4_3:34212205-34212224 Msa0638690:intron 35.0%
GTTCTGATCCACAAATACTT+TGG - chr4_3:34212291-34212310 Msa0638690:intron 35.0%
! TGTTGAAGCCAAAGTATTTG+TGG + chr4_3:34212302-34212321 None:intergenic 35.0%
GTAAAAAGAACCTTGATCCA+GGG - chr4_3:34212398-34212417 Msa0638690:five_prime_UTR 35.0%
ACACAAAGTTTACCTCTTAG+TGG + chr4_3:34212438-34212457 None:intergenic 35.0%
GAGGTAAACTTTGTGTGTTT+AGG - chr4_3:34212442-34212461 Msa0638690:five_prime_UTR 35.0%
AAGACTTCACTCAATCTTGT+GGG + chr4_3:34212479-34212498 None:intergenic 35.0%
TCAATGAGAATTCCATTCCT+GGG + chr4_3:34212546-34212565 None:intergenic 35.0%
GAAATGTCCAACCATAACAA+AGG + chr4_3:34212794-34212813 None:intergenic 35.0%
CTTATTTAACAGGGTGACAT+TGG - chr4_3:34212813-34212832 Msa0638690:five_prime_UTR 35.0%
TATTTAACAGGGTGACATTG+GGG - chr4_3:34212815-34212834 Msa0638690:five_prime_UTR 35.0%
!! AACTAGATGTTTTAGGCAGT+TGG - chr4_3:34213252-34213271 Msa0638690:intron 35.0%
GAAGCTAATGACAAACAATC+CGG - chr4_3:34213344-34213363 Msa0638690:intron 35.0%
AACAATCCGGCAAAATATGT+TGG - chr4_3:34213357-34213376 Msa0638690:intron 35.0%
ACAATCCGGCAAAATATGTT+GGG - chr4_3:34213358-34213377 Msa0638690:intron 35.0%
GAAACCAAACGTGTGAAAAT+GGG - chr4_3:34213459-34213478 Msa0638690:intron 35.0%
AAAAAACAGGTTTATGTGCC+AGG + chr4_3:34213558-34213577 None:intergenic 35.0%
TGACTTCTGTAGAAAACTAG+AGG - chr4_3:34213862-34213881 Msa0638690:five_prime_UTR 35.0%
GCACCTTAATCACTTATACA+AGG + chr4_3:34213940-34213959 None:intergenic 35.0%
!! TAAAGGTGCTCTTTGTTGAA+AGG - chr4_3:34213973-34213992 Msa0638690:five_prime_UTR 35.0%
! TGTTGGATTGGATGAGAAGA+AGG + chr4_3:34208233-34208252 None:intergenic 40.0%
!! AGCCATTTAGTTTGGGGAAT+AGG + chr4_3:34208324-34208343 None:intergenic 40.0%
!! TCTTCTGAAACCGCTTTCTT+AGG - chr4_3:34208424-34208443 Msa0638690:three_prime_UTR 40.0%
TTACACTAACACGTCAACAC+CGG - chr4_3:34208851-34208870 Msa0638690:CDS 40.0%
TGTCAAACACAGACACATGT+CGG - chr4_3:34208915-34208934 Msa0638690:intron 40.0%
GCTCAGATTTGGCATTTGTT+CGG - chr4_3:34209161-34209180 Msa0638690:CDS 40.0%
GATTCAGACAGTCCAACAAA+AGG - chr4_3:34209479-34209498 Msa0638690:intron 40.0%
CTGAGGCTATTGAAGACATT+CGG - chr4_3:34209516-34209535 Msa0638690:intron 40.0%
GCTATTGAAGACATTCGGAA+TGG - chr4_3:34209521-34209540 Msa0638690:intron 40.0%
TGAAGACATTCGGAATGGAA+AGG - chr4_3:34209526-34209545 Msa0638690:intron 40.0%
TCTAATAATGGCAGCACAGT+TGG - chr4_3:34209688-34209707 Msa0638690:intron 40.0%
ACAATAAAAGCCATAGCCTC+AGG + chr4_3:34209719-34209738 None:intergenic 40.0%
TTTATTGTGAAGCACGGAAC+TGG - chr4_3:34209731-34209750 Msa0638690:intron 40.0%
GAGATTAGAGCTTCCTTTGA+TGG - chr4_3:34209790-34209809 Msa0638690:intron 40.0%
! TTCCTTTGATGGTCAACAGT+CGG - chr4_3:34209801-34209820 Msa0638690:intron 40.0%
!!! GGTGCGTGCATTTTTTTATC+TGG - chr4_3:34209879-34209898 Msa0638690:intron 40.0%
! ATTTTGTTCCTACGCAACTC+AGG - chr4_3:34210219-34210238 Msa0638690:intron 40.0%
TGTGAGGTTGTAGATGATGA+TGG - chr4_3:34210484-34210503 Msa0638690:intron 40.0%
!! TGTAGATGATGATGGTTCCA+TGG - chr4_3:34210492-34210511 Msa0638690:intron 40.0%
AAGCTTAGGTAATCTAGCCA+TGG + chr4_3:34210512-34210531 None:intergenic 40.0%
! AATTTTCACGCTCTGCAAAC+TGG + chr4_3:34210537-34210556 None:intergenic 40.0%
ATGTTAGGACCCAATATGAG+AGG - chr4_3:34210624-34210643 Msa0638690:CDS 40.0%
TGTTAGGACCCAATATGAGA+GGG - chr4_3:34210625-34210644 Msa0638690:CDS 40.0%
TTTGAGTCAGTGAGTTGTGT+CGG - chr4_3:34210838-34210857 Msa0638690:intron 40.0%
! TGTTTGTGCTGTGTTACTGT+TGG - chr4_3:34210958-34210977 Msa0638690:intron 40.0%
TGGTTTATTGCAGGATCCAT+TGG - chr4_3:34210978-34210997 Msa0638690:intron 40.0%
GGTTTATTGCAGGATCCATT+GGG - chr4_3:34210979-34210998 Msa0638690:intron 40.0%
CATACAATGGTAGAACCCAA+TGG + chr4_3:34210997-34211016 None:intergenic 40.0%
! GTGCTTGCTCCTAATTTTAG+AGG - chr4_3:34211161-34211180 Msa0638690:intron 40.0%
! CTGCAGTGCAAGGTATTTAA+TGG + chr4_3:34211308-34211327 None:intergenic 40.0%
! AGCGCAGTTAAATTTTTCCG+TGG - chr4_3:34211352-34211371 Msa0638690:intron 40.0%
!!! TCTTTTCTGGTTACCTATCG+AGG - chr4_3:34211458-34211477 Msa0638690:intron 40.0%
TAGGTGTTAATCTCCTCGAT+AGG + chr4_3:34211474-34211493 None:intergenic 40.0%
TCGAGGAGATTAACACCTAT+TGG - chr4_3:34211475-34211494 Msa0638690:intron 40.0%
GAGATTAACACCTATTGGTC+TGG - chr4_3:34211480-34211499 Msa0638690:intron 40.0%
CTGCACTAATACCAACAATG+TGG - chr4_3:34211547-34211566 Msa0638690:intron 40.0%
GCACTAATACCAACAATGTG+GGG - chr4_3:34211549-34211568 Msa0638690:intron 40.0%
CACTAATACCAACAATGTGG+GGG - chr4_3:34211550-34211569 Msa0638690:intron 40.0%
!!! TAGGTCACTTTTAGATGGGA+TGG - chr4_3:34211593-34211612 Msa0638690:intron 40.0%
! TTTTTATATCCTGCCTGCTG+AGG - chr4_3:34211963-34211982 Msa0638690:intron 40.0%
! TTTTATATCCTGCCTGCTGA+GGG - chr4_3:34211964-34211983 Msa0638690:intron 40.0%
CTCTCTGGACTTCAAGAATT+GGG + chr4_3:34212019-34212038 None:intergenic 40.0%
TCTCTCTGGACTTCAAGAAT+TGG + chr4_3:34212020-34212039 None:intergenic 40.0%
! TTGTGAGTTGAAACTCTCTC+TGG + chr4_3:34212034-34212053 None:intergenic 40.0%
GGAAAATGACATACTTCCCT+AGG - chr4_3:34212122-34212141 Msa0638690:intron 40.0%
ATGACATACTTCCCTAGGAT+TGG - chr4_3:34212127-34212146 Msa0638690:intron 40.0%
!!! GCCCCTATCTGAGATTTTTT+GGG + chr4_3:34212209-34212228 None:intergenic 40.0%
ATGATATAGAATGCCTGAGC+AGG - chr4_3:34212328-34212347 Msa0638690:exon 40.0%
GGTAAAAAGAACCTTGATCC+AGG - chr4_3:34212397-34212416 Msa0638690:five_prime_UTR 40.0%
! CTCTTAGTGGATCCTATTTG+TGG + chr4_3:34212425-34212444 None:intergenic 40.0%
CACAAATAGGATCCACTAAG+AGG - chr4_3:34212423-34212442 Msa0638690:five_prime_UTR 40.0%
CAAGACTTCACTCAATCTTG+TGG + chr4_3:34212480-34212499 None:intergenic 40.0%
CACAAGATTGAGTGAAGTCT+TGG - chr4_3:34212478-34212497 Msa0638690:five_prime_UTR 40.0%
AGAAAGATGACTAGATCCCT+GGG + chr4_3:34212509-34212528 None:intergenic 40.0%
TAGAAAGATGACTAGATCCC+TGG + chr4_3:34212510-34212529 None:intergenic 40.0%
GTCAATGAGAATTCCATTCC+TGG + chr4_3:34212547-34212566 None:intergenic 40.0%
AGCCTGCAGGATTTGAAAAT+CGG - chr4_3:34212696-34212715 Msa0638690:five_prime_UTR 40.0%
! TCGACACTTAGCCTTTGTTA+TGG - chr4_3:34212780-34212799 Msa0638690:five_prime_UTR 40.0%
! CACTTAGCCTTTGTTATGGT+TGG - chr4_3:34212784-34212803 Msa0638690:five_prime_UTR 40.0%
ATGGATGTGATGTTCTTGTG+AGG - chr4_3:34212838-34212857 Msa0638690:intron 40.0%
TGGATGTGATGTTCTTGTGA+GGG - chr4_3:34212839-34212858 Msa0638690:intron 40.0%
TGTCTCACAGGAGACATATT+TGG - chr4_3:34212873-34212892 Msa0638690:intron 40.0%
TCTTGCAATGCAACAGATTG+AGG - chr4_3:34212929-34212948 Msa0638690:intron 40.0%
GTATATCTTCGAGGACATGA+AGG - chr4_3:34212972-34212991 Msa0638690:five_prime_UTR 40.0%
TGCTTATAACCTACAGGATG+AGG - chr4_3:34213025-34213044 Msa0638690:five_prime_UTR 40.0%
GCTTATAACCTACAGGATGA+GGG - chr4_3:34213026-34213045 Msa0638690:five_prime_UTR 40.0%
GCAGTTGGATTCACTCATAA+TGG - chr4_3:34213267-34213286 Msa0638690:intron 40.0%
ATTGCAGATATTGAGGGACT+TGG - chr4_3:34213308-34213327 Msa0638690:intron 40.0%
TTGCAGATATTGAGGGACTT+GGG - chr4_3:34213309-34213328 Msa0638690:intron 40.0%
! TTGAGCCCAACATATTTTGC+CGG + chr4_3:34213366-34213385 None:intergenic 40.0%
GCAAAATATGTTGGGCTCAA+AGG - chr4_3:34213366-34213385 Msa0638690:intron 40.0%
TATGTTGGGCTCAAAGGTTA+TGG - chr4_3:34213372-34213391 Msa0638690:intron 40.0%
! GGTTATGGTTTGTCCATTTC+AGG - chr4_3:34213387-34213406 Msa0638690:intron 40.0%
! ATGGTTTGTCCATTTCAGGT+AGG - chr4_3:34213391-34213410 Msa0638690:intron 40.0%
GGAAACCAAACGTGTGAAAA+TGG - chr4_3:34213458-34213477 Msa0638690:intron 40.0%
GTGAAAATGGGTCACATGTA+TGG - chr4_3:34213471-34213490 Msa0638690:intron 40.0%
TGTCACAAAACAGAAGAGGA+AGG - chr4_3:34213598-34213617 Msa0638690:intron 40.0%
GTCACAAAACAGAAGAGGAA+GGG - chr4_3:34213599-34213618 Msa0638690:intron 40.0%
! TGCACGATTTTTCTTCTGTC+TGG - chr4_3:34213711-34213730 Msa0638690:intron 40.0%
GGTGGAATGCTCAAAGATGT+TGG + chr4_3:34208212-34208231 None:intergenic 45.0%
! TGGATTGGATGAGAAGAAGG+TGG + chr4_3:34208230-34208249 None:intergenic 45.0%
CGTTCTGTGTTGTGTTGGAT+TGG + chr4_3:34208245-34208264 None:intergenic 45.0%
AGAGAAGGTAAAACTGACCG+TGG + chr4_3:34208383-34208402 None:intergenic 45.0%
! GGTAAAGCTTTGGCAAGACA+TGG + chr4_3:34208735-34208754 None:intergenic 45.0%
! ACGCCTTTGATCAGAAGTGT+CGG - chr4_3:34208947-34208966 Msa0638690:intron 45.0%
! GTACCGACACTTCTGATCAA+AGG + chr4_3:34208953-34208972 None:intergenic 45.0%
CCACGCACATGAATCATAGA+CGG + chr4_3:34209142-34209161 None:intergenic 45.0%
ATTCCCTTCATGTCGCAATG+CGG - chr4_3:34209195-34209214 Msa0638690:CDS 45.0%
ATACCGCATTGCGACATGAA+GGG + chr4_3:34209201-34209220 None:intergenic 45.0%
! AGGTTTTGCTTCCATACCTG+AGG - chr4_3:34209499-34209518 Msa0638690:intron 45.0%
GTCTTCAATAGCCTCAGGTA+TGG + chr4_3:34209513-34209532 None:intergenic 45.0%
CGAATGTCTTCAATAGCCTC+AGG + chr4_3:34209518-34209537 None:intergenic 45.0%
GACATTCGGAATGGAAAGGT+CGG - chr4_3:34209530-34209549 Msa0638690:intron 45.0%
AAGCATGAAAGAGGAAGACC+TGG - chr4_3:34209766-34209785 Msa0638690:intron 45.0%
! AAGGAAGCTCTAATCTCTCC+AGG + chr4_3:34209787-34209806 None:intergenic 45.0%
! TCCTTTGATGGTCAACAGTC+GGG - chr4_3:34209802-34209821 Msa0638690:intron 45.0%
CTGTCACAGTGAATGCTGTA+CGG + chr4_3:34209844-34209863 None:intergenic 45.0%
TACAGCATTCACTGTGACAG+TGG - chr4_3:34209844-34209863 Msa0638690:intron 45.0%
GATAAGTTCCTGAGTTGCGT+AGG + chr4_3:34210230-34210249 None:intergenic 45.0%
ACCTGTGGTGGTACCATATT+TGG + chr4_3:34210272-34210291 None:intergenic 45.0%
TTAGCGGGAAAATATGGCCT+GGG + chr4_3:34210369-34210388 None:intergenic 45.0%
TTTAGCGGGAAAATATGGCC+TGG + chr4_3:34210370-34210389 None:intergenic 45.0%
TTCCCGCTAAAATACAGGGA+AGG - chr4_3:34210379-34210398 Msa0638690:intron 45.0%
!!! CACCTTCCCTGTATTTTAGC+GGG + chr4_3:34210384-34210403 None:intergenic 45.0%
!! CCACCTTCCCTGTATTTTAG+CGG + chr4_3:34210385-34210404 None:intergenic 45.0%
GTTGATCTTGCAGTACTTGC+TGG - chr4_3:34210439-34210458 Msa0638690:intron 45.0%
! TCTTGCAGTACTTGCTGGTT+TGG - chr4_3:34210444-34210463 Msa0638690:intron 45.0%
GTTTCTGTTAGGACCAGAGT+AGG - chr4_3:34210810-34210829 Msa0638690:intron 45.0%
GACTCAAAGGAATCCTACTC+TGG + chr4_3:34210826-34210845 None:intergenic 45.0%
!! GACACAACTCACTGACTCAA+AGG + chr4_3:34210839-34210858 None:intergenic 45.0%
GTTGTGTCGGAGCTTAACTT+TGG - chr4_3:34210851-34210870 Msa0638690:intron 45.0%
! TTAACACCTATTGGTCTGGC+AGG - chr4_3:34211484-34211503 Msa0638690:intron 45.0%
TCTATACCTGCCAGACCAAT+AGG + chr4_3:34211493-34211512 None:intergenic 45.0%
! ATTGGTCTGGCAGGTATAGA+AGG - chr4_3:34211493-34211512 Msa0638690:intron 45.0%
GATAAACTAGTGGAACGTGC+TGG - chr4_3:34211522-34211541 Msa0638690:intron 45.0%
GGAGCATATTGCGATGGTAA+AGG - chr4_3:34211614-34211633 Msa0638690:intron 45.0%
AACCTGTTGTTACATTGCCG+TGG - chr4_3:34211865-34211884 Msa0638690:CDS 45.0%
!!! TTTTTTGGGACTTCCAGCCT+TGG + chr4_3:34212195-34212214 None:intergenic 45.0%
!!! GGCCCCTATCTGAGATTTTT+TGG + chr4_3:34212210-34212229 None:intergenic 45.0%
AACTCACGGGAAAAAGACGA+AGG + chr4_3:34212231-34212250 None:intergenic 45.0%
ATTCTGCAGCATTGTCCTGA+TGG - chr4_3:34212259-34212278 Msa0638690:intron 45.0%
TATTTGTGGACCCTGGATCA+AGG + chr4_3:34212411-34212430 None:intergenic 45.0%
TTGATCCAGGGTCCACAAAT+AGG - chr4_3:34212410-34212429 Msa0638690:five_prime_UTR 45.0%
CAATCTTGTGGGCATTAGAG+TGG + chr4_3:34212468-34212487 None:intergenic 45.0%
TCTATTTGGATGTGTAGCCC+AGG - chr4_3:34212526-34212545 Msa0638690:five_prime_UTR 45.0%
! GGCATTTTCTATAAGCCTGC+AGG - chr4_3:34212683-34212702 Msa0638690:five_prime_UTR 45.0%
!!! TGCCGATTTTCAAATCCTGC+AGG + chr4_3:34212701-34212720 None:intergenic 45.0%
GAGACATATTTGGATCTGCC+AGG - chr4_3:34212883-34212902 Msa0638690:intron 45.0%
GTGTGACTGCGGAAATCAAT+TGG - chr4_3:34212905-34212924 Msa0638690:intron 45.0%
! GGTGTGTTGGTATATCTTCG+AGG - chr4_3:34212963-34212982 Msa0638690:five_prime_UTR 45.0%
ATCTTCGAGGACATGAAGGA+AGG - chr4_3:34212976-34212995 Msa0638690:five_prime_UTR 45.0%
TCTTCGAGGACATGAAGGAA+GGG - chr4_3:34212977-34212996 Msa0638690:five_prime_UTR 45.0%
!! TGAAGGAAGGGGTATTGGAT+TGG - chr4_3:34212989-34213008 Msa0638690:five_prime_UTR 45.0%
!! GAAGGAAGGGGTATTGGATT+GGG - chr4_3:34212990-34213009 Msa0638690:five_prime_UTR 45.0%
GGTTATAAGCACGAAGCTTG+TGG + chr4_3:34213016-34213035 None:intergenic 45.0%
GCTTCGTGCTTATAACCTAC+AGG - chr4_3:34213019-34213038 Msa0638690:five_prime_UTR 45.0%
ATAACCTACAGGATGAGGGA+AGG - chr4_3:34213030-34213049 Msa0638690:five_prime_UTR 45.0%
TAACCTACAGGATGAGGGAA+GGG - chr4_3:34213031-34213050 Msa0638690:five_prime_UTR 45.0%
GGATACTGTAGAAGCCAATG+AGG - chr4_3:34213052-34213071 Msa0638690:five_prime_UTR 45.0%
TGTAGAAGCCAATGAGGAGT+TGG - chr4_3:34213058-34213077 Msa0638690:five_prime_UTR 45.0%
GTAGAAGCCAATGAGGAGTT+GGG - chr4_3:34213059-34213078 Msa0638690:five_prime_UTR 45.0%
! GACTCAAGGGAGTATGGAAT+TGG - chr4_3:34213092-34213111 Msa0638690:five_prime_UTR 45.0%
CAATGGGATCCTACCTGAAA+TGG + chr4_3:34213403-34213422 None:intergenic 45.0%
! GTGACCCATTTTCACACGTT+TGG + chr4_3:34213466-34213485 None:intergenic 45.0%
AATGGGTCACATGTATGGCT+TGG - chr4_3:34213476-34213495 Msa0638690:intron 45.0%
!!! ATATAAAATTTAAAATTGAA+AGG + chr4_3:34212745-34212764 None:intergenic 5.0%
TGCTGCGTTCTGTGTTGTGT+TGG + chr4_3:34208250-34208269 None:intergenic 50.0%
CCGTCTATGATTCATGTGCG+TGG - chr4_3:34209139-34209158 Msa0638690:CDS 50.0%
TCATGTGCGTGGCTCAGATT+TGG - chr4_3:34209150-34209169 Msa0638690:CDS 50.0%
CATACCGCATTGCGACATGA+AGG + chr4_3:34209202-34209221 None:intergenic 50.0%
! GTTAAAGCTGCGTTGACCTC+TGG - chr4_3:34209226-34209245 Msa0638690:CDS 50.0%
CAACTTAATGCGGTAGCGCT+TGG - chr4_3:34209395-34209414 Msa0638690:intron 50.0%
! GGAGCAGATACAGCTCTAAC+AGG - chr4_3:34209425-34209444 Msa0638690:intron 50.0%
! GATACAGCTCTAACAGGCAG+TGG - chr4_3:34209431-34209450 Msa0638690:intron 50.0%
TCGGTACTCTGTCTCTCTGT+GGG - chr4_3:34209549-34209568 Msa0638690:intron 50.0%
! GGTAGTGGTTGTAGATGACG+AGG - chr4_3:34209646-34209665 Msa0638690:intron 50.0%
GACGAGGACAGAGAAAACGA+AGG - chr4_3:34209662-34209681 Msa0638690:intron 50.0%
TCCCGACTGTTGACCATCAA+AGG + chr4_3:34209806-34209825 None:intergenic 50.0%
TGCCTACACAAGTGCAGCTA+GGG + chr4_3:34210011-34210030 None:intergenic 50.0%
ATGCCTACACAAGTGCAGCT+AGG + chr4_3:34210012-34210031 None:intergenic 50.0%
GCCAAATATGGTACCACCAC+AGG - chr4_3:34210268-34210287 Msa0638690:intron 50.0%
! GGATAGGGCAACCACAGTTT+TGG - chr4_3:34210303-34210322 Msa0638690:intron 50.0%
CCGCTAAAATACAGGGAAGG+TGG - chr4_3:34210382-34210401 Msa0638690:intron 50.0%
GGTGGTATCTTGAAGAGAGC+TGG - chr4_3:34210400-34210419 Msa0638690:intron 50.0%
!! ACTTGCTGGTTTGGATCCTG+TGG - chr4_3:34210453-34210472 Msa0638690:intron 50.0%
TCTGCAAACTGGCGAAGCTT+AGG + chr4_3:34210526-34210545 None:intergenic 50.0%
CACGGTAGCAGACAACATGA+GGG + chr4_3:34211081-34211100 None:intergenic 50.0%
TCACGGTAGCAGACAACATG+AGG + chr4_3:34211082-34211101 None:intergenic 50.0%
TGGGATGGAGCATATTGCGA+TGG - chr4_3:34211608-34211627 Msa0638690:intron 50.0%
AGCCACGGCAATGTAACAAC+AGG + chr4_3:34211870-34211889 None:intergenic 50.0%
TTATTACACCCTCAGCAGGC+AGG + chr4_3:34211975-34211994 None:intergenic 50.0%
AAATTGTCTGCCAGCTGCCA+AGG - chr4_3:34212175-34212194 Msa0638690:intron 50.0%
CAGAACTCTGCAAAGCCATC+AGG + chr4_3:34212277-34212296 None:intergenic 50.0%
TGGATCCTATTTGTGGACCC+TGG + chr4_3:34212418-34212437 None:intergenic 50.0%
TTGGATGTGTAGCCCAGGAA+TGG - chr4_3:34212531-34212550 Msa0638690:five_prime_UTR 50.0%
TAACAGGGTGACATTGGGGA+TGG - chr4_3:34212819-34212838 Msa0638690:five_prime_UTR 50.0%
! GTACACTCAGAGTGTCTCAC+AGG - chr4_3:34212861-34212880 Msa0638690:intron 50.0%
TTGATTTCCGCAGTCACACC+TGG + chr4_3:34212904-34212923 None:intergenic 50.0%
ATGCAACAGATTGAGGCTGC+TGG - chr4_3:34212936-34212955 Msa0638690:intron 50.0%
CTTCGAGGACATGAAGGAAG+GGG - chr4_3:34212978-34212997 Msa0638690:five_prime_UTR 50.0%
! GGACATGAAGGAAGGGGTAT+TGG - chr4_3:34212984-34213003 Msa0638690:five_prime_UTR 50.0%
TATCCCTTCCCTCATCCTGT+AGG + chr4_3:34213037-34213056 None:intergenic 50.0%
AGGCAATCCCAACTCCTCAT+TGG + chr4_3:34213069-34213088 None:intergenic 50.0%
!! TGGGATTGCCTGTTGACTCA+AGG - chr4_3:34213078-34213097 Msa0638690:five_prime_UTR 50.0%
!! GGGATTGCCTGTTGACTCAA+GGG - chr4_3:34213079-34213098 Msa0638690:five_prime_UTR 50.0%
CCATACTCCCTTGAGTCAAC+AGG + chr4_3:34213089-34213108 None:intergenic 50.0%
!! CCTGTTGACTCAAGGGAGTA+TGG - chr4_3:34213086-34213105 Msa0638690:five_prime_UTR 50.0%
GGAGTATGGAATTGGTGCAC+AGG - chr4_3:34213100-34213119 Msa0638690:intron 50.0%
GATGATTCCAGTACTGCTCC+TGG - chr4_3:34213537-34213556 Msa0638690:intron 50.0%
TTATGTGCCAGGAGCAGTAC+TGG + chr4_3:34213547-34213566 None:intergenic 50.0%
ATAGAATAGGTGAGGGGCTG+AGG - chr4_3:34213786-34213805 Msa0638690:intron 50.0%
TAGAATAGGTGAGGGGCTGA+GGG - chr4_3:34213787-34213806 Msa0638690:intron 50.0%
CACAGACACATGTCGGACGT+TGG - chr4_3:34208922-34208941 Msa0638690:intron 55.0%
! AAAGCTGCGTTGACCTCTGG+AGG - chr4_3:34209229-34209248 Msa0638690:CDS 55.0%
GTCGGTACTCTGTCTCTCTG+TGG - chr4_3:34209548-34209567 Msa0638690:intron 55.0%
AGCACAGTTGGCAACACCTG+AGG - chr4_3:34209700-34209719 Msa0638690:intron 55.0%
GTTGGCAACACCTGAGGCTA+TGG - chr4_3:34209706-34209725 Msa0638690:intron 55.0%
CACCCTAGCTGCACTTGTGT+AGG - chr4_3:34210006-34210025 Msa0638690:intron 55.0%
TGGTACCACCACAGGTGTGT+CGG - chr4_3:34210276-34210295 Msa0638690:intron 55.0%
!! AGGTGTGTCGGCTCAGGATA+GGG - chr4_3:34210288-34210307 Msa0638690:intron 55.0%
GGATGCAAGGGCCAAAACTG+TGG + chr4_3:34210317-34210336 None:intergenic 55.0%
CCTGGGCGGTTGAAATCACT+TGG + chr4_3:34210352-34210371 None:intergenic 55.0%
CCAAGTGATTTCAACCGCCC+AGG - chr4_3:34210349-34210368 Msa0638690:intron 55.0%
TCCTGTGGCAGTTCTGTGTG+AGG - chr4_3:34210468-34210487 Msa0638690:intron 55.0%
ACCTCACACAGAACTGCCAC+AGG + chr4_3:34210472-34210491 None:intergenic 55.0%
GTGAATGGCCCCCACATTGT+TGG + chr4_3:34211561-34211580 None:intergenic 55.0%
GGACATTCATCTGCCTGCTC+AGG + chr4_3:34212344-34212363 None:intergenic 55.0%
TGAAGTCTTGGCCAGTCCCA+GGG - chr4_3:34212490-34212509 Msa0638690:five_prime_UTR 55.0%
GATGACTAGATCCCTGGGAC+TGG + chr4_3:34212504-34212523 None:intergenic 55.0%
TGCGGTAGCGCTTGGAACAC+TGG - chr4_3:34209403-34209422 Msa0638690:intron 60.0%
GCGGTAGCGCTTGGAACACT+GGG - chr4_3:34209404-34209423 Msa0638690:intron 60.0%
ATCCTGAGCCGACACACCTG+TGG + chr4_3:34210287-34210306 None:intergenic 60.0%
!! CAGGTGTGTCGGCTCAGGAT+AGG - chr4_3:34210287-34210306 Msa0638690:intron 60.0%
GCGGGAAAATATGGCCTGGG+CGG + chr4_3:34210366-34210385 None:intergenic 60.0%
GTGAAGTCTTGGCCAGTCCC+AGG - chr4_3:34212489-34212508 Msa0638690:five_prime_UTR 60.0%
GGATCTGCCAGGTGTGACTG+CGG - chr4_3:34212894-34212913 Msa0638690:intron 60.0%
CAGATTGAGGCTGCTGGCAG+AGG - chr4_3:34212942-34212961 Msa0638690:intron 60.0%
TGGTCGCGAGAGAGAGGGTG+TGG + chr4_3:34208363-34208382 None:intergenic 65.0%
CACCCTCTCTCTCGCGACCA+CGG - chr4_3:34208363-34208382 Msa0638690:three_prime_UTR 65.0%
GACCGTGGTCGCGAGAGAGA+GGG + chr4_3:34208368-34208387 None:intergenic 65.0%
TGACCGTGGTCGCGAGAGAG+AGG + chr4_3:34208369-34208388 None:intergenic 65.0%
CTGAGCCGACACACCTGTGG+TGG + chr4_3:34210284-34210303 None:intergenic 65.0%
!! CACCACAGGTGTGTCGGCTC+AGG - chr4_3:34210282-34210301 Msa0638690:intron 65.0%
TGTCTGCCAGCTGCCAAGGC+TGG - chr4_3:34212179-34212198 Msa0638690:intron 65.0%
GGACTTCCAGCCTTGGCAGC+TGG + chr4_3:34212188-34212207 None:intergenic 65.0%
! GGCTGCTGGCAGAGGTGTGT+TGG - chr4_3:34212950-34212969 Msa0638690:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 34208202 34214005 34208202 ID=Msa0638690;Name=Msa0638690
chr4_3 mRNA 34208202 34214005 34208202 ID=Msa0638690-mRNA-1;Parent=Msa0638690;Name=Msa0638690-mRNA-1;_AED=0.07;_eAED=0.07;_QI=762|1|1|1|0.57|0.5|8|439|337
chr4_3 exon 34208202 34208892 34208202 ID=Msa0638690-mRNA-1:exon:7852;Parent=Msa0638690-mRNA-1
chr4_3 exon 34209086 34209382 34209086 ID=Msa0638690-mRNA-1:exon:7851;Parent=Msa0638690-mRNA-1
chr4_3 exon 34210572 34210701 34210572 ID=Msa0638690-mRNA-1:exon:7850;Parent=Msa0638690-mRNA-1
chr4_3 exon 34211620 34211942 34211620 ID=Msa0638690-mRNA-1:exon:7849;Parent=Msa0638690-mRNA-1
chr4_3 exon 34212328 34212563 34212328 ID=Msa0638690-mRNA-1:exon:7848;Parent=Msa0638690-mRNA-1
chr4_3 exon 34212660 34212854 34212660 ID=Msa0638690-mRNA-1:exon:7847;Parent=Msa0638690-mRNA-1
chr4_3 exon 34212955 34213114 34212955 ID=Msa0638690-mRNA-1:exon:7846;Parent=Msa0638690-mRNA-1
chr4_3 exon 34213823 34214005 34213823 ID=Msa0638690-mRNA-1:exon:7845;Parent=Msa0638690-mRNA-1
chr4_3 five_prime_UTR 34213823 34214005 34213823 ID=Msa0638690-mRNA-1:five_prime_utr;Parent=Msa0638690-mRNA-1
chr4_3 five_prime_UTR 34212955 34213114 34212955 ID=Msa0638690-mRNA-1:five_prime_utr;Parent=Msa0638690-mRNA-1
chr4_3 five_prime_UTR 34212660 34212854 34212660 ID=Msa0638690-mRNA-1:five_prime_utr;Parent=Msa0638690-mRNA-1
chr4_3 five_prime_UTR 34212340 34212563 34212340 ID=Msa0638690-mRNA-1:five_prime_utr;Parent=Msa0638690-mRNA-1
chr4_3 CDS 34212328 34212339 34212328 ID=Msa0638690-mRNA-1:cds;Parent=Msa0638690-mRNA-1
chr4_3 CDS 34211620 34211942 34211620 ID=Msa0638690-mRNA-1:cds;Parent=Msa0638690-mRNA-1
chr4_3 CDS 34210572 34210701 34210572 ID=Msa0638690-mRNA-1:cds;Parent=Msa0638690-mRNA-1
chr4_3 CDS 34209086 34209382 34209086 ID=Msa0638690-mRNA-1:cds;Parent=Msa0638690-mRNA-1
chr4_3 CDS 34208641 34208892 34208641 ID=Msa0638690-mRNA-1:cds;Parent=Msa0638690-mRNA-1
chr4_3 three_prime_UTR 34208202 34208640 34208202 ID=Msa0638690-mRNA-1:three_prime_utr;Parent=Msa0638690-mRNA-1
Gene Sequence

>Msa0638690

ATGTACAATTTGGATGCCAAATATGGTACCACCACAGGTGTGTCGGCTCAGGATAGGGCAACCACAGTTTTGGCCCTTGCATCCAAAGATTCAAAACCAAGTGATTTCAACCGCCCAGGCCATATTTTCCCGCTAAAATACAGGGAAGGTGGTATCTTGAAGAGAGCTGGACATACAGAAGCTTCAGTTGATCTTGCAGTACTTGCTGGTTTGGATCCTGTGGCAGTTCTGTGTGAGGTTGTAGATGATGATGGTTCCATGGCTAGATTACCTAAGCTTCGCCAGTTTGCAGAGCGTGAAAATTTGAAAATTATATCTATTGCTGACTTAATAAGGTATAGAAGGAAGAGAGATAAACTAGTGGAACGTGCTGGTGCTGCACTAATACCAACAATGTGGGGGCCATTCACAGCTAACTGTTATAGGTCACTTTTAGATGGGATGGAGCATATTGCGATGGTAAAGGGTGACATTGGGGATGGATGTGATGTTCTTGTGAGGGTACACTCAGAGTGTCTCACAGGAGACATATTTGGATCTGCCAGGTGTGACTGCGGAAATCAATTGGCTCTTGCAATGCAACAGATTGAGGCTGCTGGCAGAGGTGTGTTGGTATATCTTCGAGGACATGAAGGAAGGGGTATTGGATTGGGCCACAAGCTTCGTGCTTATAACCTACAGGATGAGGGAAGGGATACTGTAGAAGCCAATGAGGAGTTGGGATTGCCTGTTGACTCAAGGGAGTATGGAATTGGTGCACAGATATTGAGGGACTTGGGTGTTCGTTCTATGAAGCTAATGACAAACAATCCGGCAAAATATGTTGGGCTCAAAGGTTATGGTTTGTCCATTTCAGGTAGGATCCCATTGTTATCACTTATCACAAATGAAAACAGGAGATACTTGGAAACCAAACGTGTGAAAATGGGTCACATGTATGGCTTGGAATTTAACAGCAAATTGAATGGTAATGCCAGTAATATTGATGATTCCAGTACTGCTCCTGGCACATAA

Protein sequence

>Msa0638690

MYNLDAKYGTTTGVSAQDRATTVLALASKDSKPSDFNRPGHIFPLKYREGGILKRAGHTEASVDLAVLAGLDPVAVLCEVVDDDGSMARLPKLRQFAERENLKIISIADLIRYRRKRDKLVERAGAALIPTMWGPFTANCYRSLLDGMEHIAMVKGDIGDGCDVLVRVHSECLTGDIFGSARCDCGNQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDEGRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNNPAKYVGLKGYGLSISGRIPLLSLITNENRRYLETKRVKMGHMYGLEFNSKLNGNASNIDDSSTAPGT*