AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0526710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0526710 MtrunA17_Chr1g0190771 98.945 379 4 0 1 379 1 379 0.0 787
Msa0526710 MtrunA17_Chr7g0274131 91.005 378 32 2 1 377 1 377 0.0 727
Msa0526710 MtrunA17_Chr4g0067461 28.165 316 208 8 29 340 112 412 2.03e-28 115
Msa0526710 MtrunA17_Chr4g0031131 27.832 309 208 9 28 331 32 330 3.26e-25 104
Msa0526710 MtrunA17_Chr2g0327981 28.662 314 199 11 28 331 38 336 4.69e-25 104
Msa0526710 MtrunA17_Chr1g0195521 25.959 339 223 9 28 347 118 447 1.33e-24 104
Msa0526710 MtrunA17_Chr7g0268991 24.768 323 216 8 29 342 16 320 2.43e-21 93.6
Msa0526710 MtrunA17_Chr1g0182091 28.311 219 150 5 114 331 1 213 2.14e-17 80.5
Msa0526710 MtrunA17_Chr4g0056941 24.340 341 213 11 30 338 95 422 4.68e-15 76.3
Msa0526710 MtrunA17_Chr4g0011281 24.189 339 214 12 28 335 101 427 6.59e-15 75.9
Msa0526710 MtrunA17_Chr5g0398811 24.412 340 212 12 28 335 90 416 2.47e-14 73.9
Msa0526710 MtrunA17_Chr1g0147841 25.688 327 217 14 26 337 3 318 4.49e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0526710 AT5G28840.2 90.981 377 34 0 1 377 1 377 0.0 729
Msa0526710 AT5G28840.1 90.981 377 34 0 1 377 1 377 0.0 729
Msa0526710 AT3G62830.2 27.160 324 222 8 28 347 119 432 2.53e-28 115
Msa0526710 AT3G62830.1 27.160 324 222 8 28 347 119 432 2.53e-28 115
Msa0526710 AT2G47650.1 28.247 308 207 8 28 331 121 418 4.37e-28 114
Msa0526710 AT3G53520.1 27.744 328 222 9 26 348 118 435 4.38e-28 114
Msa0526710 AT2G47650.2 27.707 314 207 9 28 331 121 424 2.21e-26 110
Msa0526710 AT3G53520.2 27.134 328 222 10 26 348 118 433 3.98e-25 106
Msa0526710 AT2G28760.1 28.013 307 206 9 28 329 31 327 7.32e-25 104
Msa0526710 AT2G28760.2 28.013 307 206 9 28 329 31 327 7.32e-25 104
Msa0526710 AT2G28760.3 28.013 307 206 9 28 329 31 327 7.32e-25 104
Msa0526710 AT3G46440.2 27.653 311 202 10 28 329 29 325 8.49e-25 103
Msa0526710 AT3G46440.1 27.653 311 202 10 28 329 29 325 8.49e-25 103
Msa0526710 AT2G28760.4 28.013 307 206 9 28 329 62 358 2.12e-24 103
Msa0526710 AT5G59290.4 27.010 311 204 10 28 329 1 297 4.84e-24 101
Msa0526710 AT5G59290.1 27.010 311 204 10 28 329 30 326 7.29e-24 101
Msa0526710 AT1G73250.1 25.714 315 209 7 29 335 18 315 7.48e-24 100
Msa0526710 AT5G59290.2 27.010 311 204 10 28 329 45 341 9.49e-24 101
Msa0526710 AT5G59290.3 27.010 311 204 10 28 329 23 319 1.51e-23 100
Msa0526710 AT3G53520.4 25.779 353 220 11 26 348 118 458 2.29e-23 101
Msa0526710 AT1G17890.1 25.231 325 216 8 29 344 21 327 3.00e-23 99.4
Msa0526710 AT1G17890.2 25.231 325 216 8 29 344 13 319 3.18e-23 99.4
Msa0526710 AT1G17890.3 25.231 325 216 8 29 344 13 319 3.18e-23 99.4
Msa0526710 AT2G45310.1 26.100 341 205 14 28 335 97 423 8.81e-18 84.7
Msa0526710 AT3G23820.1 24.793 363 220 14 28 351 112 460 3.63e-16 80.1
Msa0526710 AT4G00110.1 24.706 340 211 13 28 335 91 417 4.08e-15 77.0
Msa0526710 AT1G02000.1 23.824 340 214 12 28 335 92 418 6.14e-14 73.2
Msa0526710 AT4G30440.1 23.754 341 213 12 28 335 88 414 1.16e-12 69.3
Msa0526710 AT1G53500.1 24.771 327 220 13 30 341 11 326 1.45e-12 69.7

Find 137 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATGAAGTTCAATGTAAT+TGG 0.238222 3_4:+80749791 Msa0526710:three_prime_UTR
ATTGAAGCTGCTAGGATTAA+TGG 0.256067 3_4:+80747826 Msa0526710:CDS
CATAACATATATGGTCCTTT+TGG 0.258635 3_4:+80748271 Msa0526710:CDS
CTGCCCGAAGTGAGCCTAAT+TGG 0.271744 3_4:-80749483 None:intergenic
TTCCGCGAGCCGGTAAATAT+TGG 0.274622 3_4:+80748959 Msa0526710:CDS
GTTTCTAACTGTTTAAATTC+AGG 0.285374 3_4:-80748011 None:intergenic
GCTTTATATTACAGCTCAAT+AGG 0.299580 3_4:+80749573 Msa0526710:three_prime_UTR
ACATATAGAGATAGCATAAT+TGG 0.300626 3_4:-80746553 None:intergenic
TGAAAATACATTGAGCAATA+AGG 0.303319 3_4:-80749649 None:intergenic
ATCTTGAGAGAGAGCCTTAC+TGG 0.304697 3_4:+80747494 Msa0526710:CDS
AGCAGTGAAGTAAATGTTTC+CGG 0.313113 3_4:+80749540 Msa0526710:three_prime_UTR
TTTCAATCTTGCCGCTGATA+TGG 0.324249 3_4:+80747732 Msa0526710:CDS
TAAAGCACTTGTCGGTGCTT+GGG 0.326365 3_4:+80749686 Msa0526710:three_prime_UTR
GAGATGGCTGAGATCGTTCT+TGG 0.352457 3_4:+80749007 Msa0526710:CDS
TATACCTTCAACTTCATTGT+TGG 0.357453 3_4:-80749133 None:intergenic
TTCTTCTAATCTATATATAT+AGG 0.357672 3_4:-80746616 None:intergenic
GCCTAATTGGACCGGTGCTT+GGG 0.360185 3_4:-80749470 None:intergenic
AATTCCATCTTGTTGATCTC+AGG 0.363929 3_4:+80747665 Msa0526710:CDS
AAAATTTCCATCACTGGTGC+TGG 0.368034 3_4:+80747532 Msa0526710:CDS
ATTTACCGGCTCGCGGAAAT+CGG 0.371961 3_4:-80748954 None:intergenic
CAAAAGGACCATATATGTTA+TGG 0.374113 3_4:-80748270 None:intergenic
AAGCACTACAACAAAGATTT+CGG 0.376422 3_4:+80748223 Msa0526710:CDS
TCATCACTTCCAATATTTAC+CGG 0.378878 3_4:-80748968 None:intergenic
AGCCTAATTGGACCGGTGCT+TGG 0.382304 3_4:-80749471 None:intergenic
TTCAATCTTGCCGCTGATAT+GGG 0.385962 3_4:+80747733 Msa0526710:CDS
GATTACATATGTCTGGATTA+AGG 0.386996 3_4:+80749378 Msa0526710:CDS
TTAAAGCACTTGTCGGTGCT+TGG 0.387514 3_4:+80749685 Msa0526710:three_prime_UTR
GGGAGGTTCCATAACATATA+TGG 0.396979 3_4:+80748262 Msa0526710:CDS
ACTGCTTAACGGTTACTAAA+GGG 0.409840 3_4:+80747698 Msa0526710:CDS
TGTCTTTGTGTGGAAGTAGA+TGG 0.413404 3_4:+80746521 Msa0526710:five_prime_UTR
AACTACTAATGTCAGCTTGA+AGG 0.417690 3_4:+80748031 Msa0526710:CDS
TTTCTAACTGTTTAAATTCA+GGG 0.425655 3_4:-80748010 None:intergenic
GGCTGAGGATTACATATGTC+TGG 0.425884 3_4:+80749371 Msa0526710:CDS
ACATTATCATCACATCAATC+AGG 0.432026 3_4:+80746695 Msa0526710:five_prime_UTR
GGGCCAGGAATGTGATGTAT+AGG 0.440229 3_4:-80749049 None:intergenic
AAGCTTAAAATTTCCATCAC+TGG 0.443314 3_4:+80747526 Msa0526710:CDS
CAAAGAGAGTAGTTAATTCA+TGG 0.447053 3_4:+80749513 Msa0526710:exon
TTCTGCAGGATGGGAAGTAC+TGG 0.452616 3_4:+80747439 Msa0526710:intron
ATACATAATAACAGAATGAT+TGG 0.454190 3_4:-80747776 None:intergenic
ATGTATGGAGAGAAGAGGTT+TGG 0.454830 3_4:-80746676 None:intergenic
TTCGGAATTGAGTGCCGCAT+TGG 0.455787 3_4:+80748241 Msa0526710:CDS
CTTTATATTACAGCTCAATA+GGG 0.457105 3_4:+80749574 Msa0526710:three_prime_UTR
TTCATTGATGAGTGTGTTGA+AGG 0.460492 3_4:+80748526 Msa0526710:CDS
TTACGACCACGAACACCCTC+TGG 0.466075 3_4:-80749070 None:intergenic
CCACGAACACCCTCTGGGCC+AGG 0.469580 3_4:-80749064 None:intergenic
GGTCCAATTAGGCTCACTTC+GGG 0.470769 3_4:+80749480 Msa0526710:CDS
TCGGAATTGAGTGCCGCATT+GGG 0.470875 3_4:+80748242 Msa0526710:CDS
CTCTCTCTCAAGATTCTCAT+AGG 0.472504 3_4:-80747485 None:intergenic
AAAGCACTTGTCGGTGCTTG+GGG 0.472833 3_4:+80749687 Msa0526710:three_prime_UTR
AGGTTTGGTTTGAGTTGAGA+AGG 0.473129 3_4:-80746661 None:intergenic
ACTCCTATACATCACATTCC+TGG 0.476449 3_4:+80749046 Msa0526710:CDS
ACCCAAGCACCGGTCCAATT+AGG 0.477394 3_4:+80749469 Msa0526710:CDS
AAATTTCCATCACTGGTGCT+GGG 0.477839 3_4:+80747533 Msa0526710:CDS
AACTGCTTAACGGTTACTAA+AGG 0.478063 3_4:+80747697 Msa0526710:CDS
CTAGGATTAATGGAATTAAG+AGG 0.478585 3_4:+80747836 Msa0526710:CDS
CACGTTATTTATGCGTAGAT+CGG 0.479941 3_4:+80749623 Msa0526710:three_prime_UTR
ATATAAAGCACACTCTTCTC+CGG 0.481376 3_4:-80749559 None:intergenic
GCCGCTGATATGGGTGGAAT+GGG 0.482360 3_4:+80747742 Msa0526710:CDS
CCTGGCCCAGAGGGTGTTCG+TGG 0.486762 3_4:+80749064 Msa0526710:CDS
GCTGAAATAATAAATATATC+CGG 0.489403 3_4:-80749858 None:intergenic
GTTTGAGTTGAGAAGGCAAT+TGG 0.493292 3_4:-80746654 None:intergenic
AAATTTGAGATGTGGGGAGA+TGG 0.493691 3_4:+80748481 Msa0526710:CDS
TGCCGCTGATATGGGTGGAA+TGG 0.494921 3_4:+80747741 Msa0526710:CDS
GGTCATGGATAACTGCTTAA+CGG 0.498357 3_4:+80747687 Msa0526710:CDS
TAAATCCGATTTCCGCGAGC+CGG 0.501210 3_4:+80748949 Msa0526710:CDS
GATATTAGTGTATGTAGTGC+CGG 0.507850 3_4:+80749839 Msa0526710:three_prime_UTR
TACAGACAAATTTGAGATGT+GGG 0.508195 3_4:+80748474 Msa0526710:CDS
GGCTCCAACAATGAAGTTGA+AGG 0.508928 3_4:+80749129 Msa0526710:CDS
ATTACATTATTGCTTCTGAC+TGG 0.512162 3_4:+80747602 Msa0526710:CDS
GATTAAGGAACAACTTGAAA+GGG 0.521122 3_4:+80749393 Msa0526710:CDS
TGAGTTGAGAAGGCAATTGG+TGG 0.526061 3_4:-80746651 None:intergenic
CGGTCCAATTAGGCTCACTT+CGG 0.527001 3_4:+80749479 Msa0526710:CDS
GCTCAAGGTCTTGATACATC+AGG 0.527626 3_4:+80749421 Msa0526710:CDS
TGAAATTGATACTTGAACAG+AGG 0.529012 3_4:-80749952 None:intergenic
ATACCTTTCCATGTTCCAAA+AGG 0.529802 3_4:-80748286 None:intergenic
AATCGCGAACAAACCTCAGC+AGG 0.536092 3_4:-80748068 None:intergenic
TAATAAAAGAGAAACTTGGC+TGG 0.537272 3_4:+80749107 Msa0526710:CDS
TCTATATATATAGGACGAGA+AGG 0.537392 3_4:-80746607 None:intergenic
TGCTTTGTCATACAGGTGGA+AGG 0.539745 3_4:+80748410 Msa0526710:intron
CAGCGGCAAGATTGAAAACA+TGG 0.540286 3_4:-80747726 None:intergenic
ATTGATGTGATGATAATGTA+TGG 0.541937 3_4:-80746691 None:intergenic
AATTTCCATCACTGGTGCTG+GGG 0.543928 3_4:+80747534 Msa0526710:CDS
TCTTGTTGATCTCAGGGTCA+TGG 0.544557 3_4:+80747672 Msa0526710:CDS
ATTCCATCTTGTTGATCTCA+GGG 0.549458 3_4:+80747666 Msa0526710:CDS
CTGCTTAACGGTTACTAAAG+GGG 0.550109 3_4:+80747699 Msa0526710:CDS
TTCAACACACTCATCAATGA+AGG 0.550166 3_4:-80748524 None:intergenic
GTTTAGCCACAAGATGCGTA+TGG 0.550376 3_4:+80748169 Msa0526710:intron
CTTAGCGCGGCGTCTCAAGA+AGG 0.553238 3_4:+80747573 Msa0526710:CDS
GGCTCACTTCGGGCAGCAGA+CGG 0.553347 3_4:+80749490 Msa0526710:CDS
TCAATATGATTGAAGCTGCT+AGG 0.554345 3_4:+80747818 Msa0526710:CDS
CGAAGTGAGCCTAATTGGAC+CGG 0.556358 3_4:-80749478 None:intergenic
TGGTATTGTAGGATGGGCTG+AGG 0.562487 3_4:+80749356 Msa0526710:intron
TCATACAGGTGGAAGGGAGA+AGG 0.564053 3_4:+80748417 Msa0526710:intron
GCTCAATAGGGTCGATGTCA+TGG 0.565109 3_4:+80749586 Msa0526710:three_prime_UTR
GGATTAAGGAACAACTTGAA+AGG 0.565415 3_4:+80749392 Msa0526710:CDS
GTCTGATGCATGGCCTGCTG+AGG 0.565899 3_4:+80748055 Msa0526710:CDS
ATTTCCATCACTGGTGCTGG+GGG 0.574182 3_4:+80747535 Msa0526710:CDS
GGTCTTGATACATCAGGATA+CGG 0.574577 3_4:+80749427 Msa0526710:CDS
GAAATTGATACTTGAACAGA+GGG 0.577472 3_4:-80749951 None:intergenic
CACAACTGTGGAAGTAACAA+TGG 0.578205 3_4:-80749911 None:intergenic
CTTGAAAGGGAGAAGGCTCA+AGG 0.580968 3_4:+80749406 Msa0526710:CDS
GCTAGAGAAGCTTGCAACAG+AGG 0.582464 3_4:+80748192 Msa0526710:CDS
GAATTGAGTGCCGCATTGGG+AGG 0.584070 3_4:+80748245 Msa0526710:CDS
ACACTAATAAAAGAGAAACT+TGG 0.584612 3_4:+80749103 Msa0526710:CDS
AGTGTGTTGAAGGTGTACTT+AGG 0.590072 3_4:+80748536 Msa0526710:CDS
ATGAAAAGCTTGTCTTTGTG+TGG 0.590202 3_4:+80746511 Msa0526710:five_prime_UTR
AGGATACGGCTCATCAAAAG+TGG 0.590362 3_4:+80749441 Msa0526710:CDS
TTATCGCGTCGCACTTAGCG+CGG 0.590377 3_4:+80747560 Msa0526710:CDS
AATCTTGCCGCTGATATGGG+TGG 0.591075 3_4:+80747736 Msa0526710:CDS
AGCGCGGCGTCTCAAGAAGG+AGG 0.592364 3_4:+80747576 Msa0526710:CDS
CATCACATTCCTGGCCCAGA+GGG 0.594287 3_4:+80749055 Msa0526710:CDS
TTCCAATATTTACCGGCTCG+CGG 0.595261 3_4:-80748961 None:intergenic
TGACCCTGAGATCAACAAGA+TGG 0.595396 3_4:-80747669 None:intergenic
TTTAGCCACAAGATGCGTAT+GGG 0.596572 3_4:+80748170 Msa0526710:intron
CTACAGACAAATTTGAGATG+TGG 0.598727 3_4:+80748473 Msa0526710:CDS
ATATATAGGACGAGAAGGGA+AGG 0.599216 3_4:-80746602 None:intergenic
AATAAAAGAGAAACTTGGCT+GGG 0.602593 3_4:+80749108 Msa0526710:CDS
GCTTTGTCATACAGGTGGAA+GGG 0.602719 3_4:+80748411 Msa0526710:intron
TACGACCACGAACACCCTCT+GGG 0.602751 3_4:-80749069 None:intergenic
AAGCACTTGTCGGTGCTTGG+GGG 0.603889 3_4:+80749688 Msa0526710:three_prime_UTR
ATTGAACTTCATAAATCATG+AGG 0.605744 3_4:-80749783 None:intergenic
CTAGCAAAATAACGAACAAG+TGG 0.606439 3_4:+80746579 Msa0526710:five_prime_UTR
AGTGGTGCAAACCCAAGCAC+CGG 0.611968 3_4:+80749459 Msa0526710:CDS
AAATATTGGAAGTGATGAGA+TGG 0.614662 3_4:+80748973 Msa0526710:CDS
CTATATATATAGGACGAGAA+GGG 0.614804 3_4:-80746606 None:intergenic
TCTAGCCCATACGCATCTTG+TGG 0.616959 3_4:-80748175 None:intergenic
GGAACAACTTGAAAGGGAGA+AGG 0.619660 3_4:+80749399 Msa0526710:CDS
TATCTAAAATCACACAACTG+TGG 0.645712 3_4:-80749923 None:intergenic
GCTTGAAGGAGTCTGATGCA+TGG 0.646402 3_4:+80748045 Msa0526710:CDS
TGATAATGTATGGAGAGAAG+AGG 0.646893 3_4:-80746681 None:intergenic
ACCCATTCCACCCATATCAG+CGG 0.650854 3_4:-80747743 None:intergenic
GCGCGGCGTCTCAAGAAGGA+GGG 0.659404 3_4:+80747577 Msa0526710:CDS
ACAGACAAATTTGAGATGTG+GGG 0.667327 3_4:+80748475 Msa0526710:CDS
ACATCACATTCCTGGCCCAG+AGG 0.671457 3_4:+80749054 Msa0526710:CDS
AGGGTAGATACAAGCACTTG+AGG 0.678133 3_4:-80747991 None:intergenic
GATGGTCAGCATGAATGAGA+TGG 0.684833 3_4:+80748991 Msa0526710:CDS
TGTTATGGAACCTCCCAATG+CGG 0.724863 3_4:-80748255 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCTTCTAATCTATATATAT+AGG - chr3_4:80746619-80746638 None:intergenic 15.0%
!! TTGTTGAAGTAATTAAAAAA+GGG - chr3_4:80746736-80746755 None:intergenic 15.0%
!! ATTGTTGAAGTAATTAAAAA+AGG - chr3_4:80746737-80746756 None:intergenic 15.0%
!! TATTATCGATAATTATATTG+CGG + chr3_4:80746800-80746819 Msa0526710:intron 15.0%
!!! CAATTTTTTGACTAAAATTT+TGG - chr3_4:80747078-80747097 None:intergenic 15.0%
!!! TTTATTTTTACATTAAGCTT+GGG + chr3_4:80748120-80748139 Msa0526710:intron 15.0%
!!! TTAGTAGATGTTTTTAATTT+TGG + chr3_4:80748361-80748380 Msa0526710:intron 15.0%
!!! TAATAAGTTTTTATCCAATT+TGG + chr3_4:80749185-80749204 Msa0526710:intron 15.0%
!! TAATTAAAAAAGGGAAATTG+AGG - chr3_4:80746727-80746746 None:intergenic 20.0%
!! TATAAAATAGCAGTGATAAA+TGG - chr3_4:80746982-80747001 None:intergenic 20.0%
!!! TGACTAAAATTTTGGTTTTT+AGG - chr3_4:80747070-80747089 None:intergenic 20.0%
!! TAAGTACAACTCAAATTAAA+AGG - chr3_4:80747216-80747235 None:intergenic 20.0%
!! ATGGTTGACAAAAATAAATA+GGG - chr3_4:80747270-80747289 None:intergenic 20.0%
!! TATGGTTGACAAAAATAAAT+AGG - chr3_4:80747271-80747290 None:intergenic 20.0%
!! TGAAAACAATTAATTCACTA+TGG - chr3_4:80747289-80747308 None:intergenic 20.0%
!! ATACATAATAACAGAATGAT+TGG - chr3_4:80747779-80747798 None:intergenic 20.0%
!! CAAAATCACTAATATTTGTT+CGG - chr3_4:80747897-80747916 None:intergenic 20.0%
!! TTTCTAACTGTTTAAATTCA+GGG - chr3_4:80748013-80748032 None:intergenic 20.0%
!!! CTTTATTTTTACATTAAGCT+TGG + chr3_4:80748119-80748138 Msa0526710:intron 20.0%
!!! GAATTATAATTTTGAGCTTA+TGG + chr3_4:80748631-80748650 Msa0526710:intron 20.0%
!!! ATAATTTTAGTATCCGTAAT+TGG + chr3_4:80748816-80748835 Msa0526710:intron 20.0%
!! ATTCATTAAAGTCAAACAAT+AGG - chr3_4:80749294-80749313 None:intergenic 20.0%
!! TGACTTTAATGAATATTCAA+AGG + chr3_4:80749300-80749319 Msa0526710:intron 20.0%
!! GACTTTAATGAATATTCAAA+GGG + chr3_4:80749301-80749320 Msa0526710:intron 20.0%
!! TTTATGAAGTTCAATGTAAT+TGG + chr3_4:80749791-80749810 Msa0526710:three_prime_UTR 20.0%
!! GCTGAAATAATAAATATATC+CGG - chr3_4:80749861-80749880 None:intergenic 20.0%
! ACATATAGAGATAGCATAAT+TGG - chr3_4:80746556-80746575 None:intergenic 25.0%
!! ATTGATGTGATGATAATGTA+TGG - chr3_4:80746694-80746713 None:intergenic 25.0%
! GATAATTATATTGCGGTTTA+GGG + chr3_4:80746807-80746826 Msa0526710:intron 25.0%
! GTTTAACCTTTGAATTATCA+AGG + chr3_4:80746829-80746848 Msa0526710:intron 25.0%
!! ACAAATCCTTGATAATTCAA+AGG - chr3_4:80746838-80746857 None:intergenic 25.0%
!! CAGTAAAATCGTTTTACATT+AGG - chr3_4:80746870-80746889 None:intergenic 25.0%
!!! TTATCACTGCTATTTTATAC+TGG + chr3_4:80746983-80747002 Msa0526710:intron 25.0%
!! GAAATTTTAAGCTTTTCTGA+TGG - chr3_4:80747520-80747539 None:intergenic 25.0%
! ACTAATATTTGTTCGGTTAT+AGG - chr3_4:80747890-80747909 None:intergenic 25.0%
!! AAACAAACATTTTTCGCAAT+TGG - chr3_4:80747955-80747974 None:intergenic 25.0%
! GTTTCTAACTGTTTAAATTC+AGG - chr3_4:80748014-80748033 None:intergenic 25.0%
!!! CATCTACTAATTTGCTTATT+CGG - chr3_4:80748351-80748370 None:intergenic 25.0%
! AAAAAACACATGAATAAAGC+TGG - chr3_4:80748594-80748613 None:intergenic 25.0%
! ACATGAAAAGTTTGGTTAAA+TGG - chr3_4:80748681-80748700 None:intergenic 25.0%
! ACACTAATAAAAGAGAAACT+TGG + chr3_4:80749103-80749122 Msa0526710:CDS 25.0%
! TTATTAAGACACAAGAAAGA+AGG - chr3_4:80749171-80749190 None:intergenic 25.0%
!!! GAAAGTGTAATGGAATTTTT+AGG + chr3_4:80749226-80749245 Msa0526710:intron 25.0%
! TTAAAGTCAAACAATAGGAA+AGG - chr3_4:80749289-80749308 None:intergenic 25.0%
! TATCTAAATTCTGGTATTGT+AGG + chr3_4:80749345-80749364 Msa0526710:intron 25.0%
! CTTTATATTACAGCTCAATA+GGG + chr3_4:80749574-80749593 Msa0526710:three_prime_UTR 25.0%
! TGAAAATACATTGAGCAATA+AGG - chr3_4:80749652-80749671 None:intergenic 25.0%
!!! TTGTTTTTAGTCTCAATTTG+TGG + chr3_4:80749735-80749754 Msa0526710:three_prime_UTR 25.0%
! ATTGAACTTCATAAATCATG+AGG - chr3_4:80749786-80749805 None:intergenic 25.0%
CTATATATATAGGACGAGAA+GGG - chr3_4:80746609-80746628 None:intergenic 30.0%
TCTATATATATAGGACGAGA+AGG - chr3_4:80746610-80746629 None:intergenic 30.0%
ACATTATCATCACATCAATC+AGG + chr3_4:80746695-80746714 Msa0526710:five_prime_UTR 30.0%
CGATAATTATATTGCGGTTT+AGG + chr3_4:80746806-80746825 Msa0526710:intron 30.0%
ATCCTGCAGAACAAAAAAAT+TGG - chr3_4:80747430-80747449 None:intergenic 30.0%
!!! AATTTTTTTGTTCTGCAGGA+TGG + chr3_4:80747429-80747448 Msa0526710:intron 30.0%
!!! ATTTTTTTGTTCTGCAGGAT+GGG + chr3_4:80747430-80747449 Msa0526710:intron 30.0%
! AGTACTGGAAAAACTAACTA+TGG + chr3_4:80747454-80747473 Msa0526710:CDS 30.0%
AAGCTTAAAATTTCCATCAC+TGG + chr3_4:80747526-80747545 Msa0526710:CDS 30.0%
ATTACATTATTGCTTCTGAC+TGG + chr3_4:80747602-80747621 Msa0526710:CDS 30.0%
CTAGGATTAATGGAATTAAG+AGG + chr3_4:80747836-80747855 Msa0526710:CDS 30.0%
! TATCTGACACATCATGTTTT+TGG + chr3_4:80747863-80747882 Msa0526710:intron 30.0%
!! GCGAAAAATGTTTGTTTTTC+AGG + chr3_4:80747958-80747977 Msa0526710:intron 30.0%
AAATGCATCAAACAACCAAA+AGG - chr3_4:80748094-80748113 None:intergenic 30.0%
! TTTGGTTGTTTGATGCATTT+TGG + chr3_4:80748094-80748113 Msa0526710:intron 30.0%
AAGCACTACAACAAAGATTT+CGG + chr3_4:80748223-80748242 Msa0526710:CDS 30.0%
CAAAAGGACCATATATGTTA+TGG - chr3_4:80748273-80748292 None:intergenic 30.0%
! CATAACATATATGGTCCTTT+TGG + chr3_4:80748271-80748290 Msa0526710:CDS 30.0%
AAGCAACAAACTCATTACAT+CGG - chr3_4:80748395-80748414 None:intergenic 30.0%
! TACAGACAAATTTGAGATGT+GGG + chr3_4:80748474-80748493 Msa0526710:CDS 30.0%
ATTGCATAAATGACATTGAG+AGG + chr3_4:80748778-80748797 Msa0526710:intron 30.0%
! TTTTAGTATCCGTAATTGGT+TGG + chr3_4:80748820-80748839 Msa0526710:intron 30.0%
TTTAGTATCCGTAATTGGTT+GGG + chr3_4:80748821-80748840 Msa0526710:intron 30.0%
TCATCACTTCCAATATTTAC+CGG - chr3_4:80748971-80748990 None:intergenic 30.0%
AAATATTGGAAGTGATGAGA+TGG + chr3_4:80748973-80748992 Msa0526710:CDS 30.0%
TAATAAAAGAGAAACTTGGC+TGG + chr3_4:80749107-80749126 Msa0526710:CDS 30.0%
AATAAAAGAGAAACTTGGCT+GGG + chr3_4:80749108-80749127 Msa0526710:CDS 30.0%
TATACCTTCAACTTCATTGT+TGG - chr3_4:80749136-80749155 None:intergenic 30.0%
! TCTTCTTTCAGAAAGTGTAA+TGG + chr3_4:80749216-80749235 Msa0526710:intron 30.0%
TTACAGCAGTATCTAAATTC+TGG + chr3_4:80749336-80749355 Msa0526710:intron 30.0%
TAAATTCTGGTATTGTAGGA+TGG + chr3_4:80749349-80749368 Msa0526710:intron 30.0%
AAATTCTGGTATTGTAGGAT+GGG + chr3_4:80749350-80749369 Msa0526710:intron 30.0%
GATTACATATGTCTGGATTA+AGG + chr3_4:80749378-80749397 Msa0526710:CDS 30.0%
GATTAAGGAACAACTTGAAA+GGG + chr3_4:80749393-80749412 Msa0526710:CDS 30.0%
CAAAGAGAGTAGTTAATTCA+TGG + chr3_4:80749513-80749532 Msa0526710:exon 30.0%
GCTTTATATTACAGCTCAAT+AGG + chr3_4:80749573-80749592 Msa0526710:three_prime_UTR 30.0%
!!! ACCTTTTTTAAAGCACTTGT+CGG + chr3_4:80749678-80749697 Msa0526710:three_prime_UTR 30.0%
! TATCTAAAATCACACAACTG+TGG - chr3_4:80749926-80749945 None:intergenic 30.0%
ATGAAAAGCTTGTCTTTGTG+TGG + chr3_4:80746511-80746530 Msa0526710:five_prime_UTR 35.0%
CTAGCAAAATAACGAACAAG+TGG + chr3_4:80746579-80746598 Msa0526710:five_prime_UTR 35.0%
! TGATAATGTATGGAGAGAAG+AGG - chr3_4:80746684-80746703 None:intergenic 35.0%
GCATAGACAATTGATATGCT+AGG - chr3_4:80747194-80747213 None:intergenic 35.0%
GAATGCAATACAAGACATGA+AGG - chr3_4:80747354-80747373 None:intergenic 35.0%
!!! GACCAATTTTTTTGTTCTGC+AGG + chr3_4:80747425-80747444 Msa0526710:intron 35.0%
AATTCCATCTTGTTGATCTC+AGG + chr3_4:80747665-80747684 Msa0526710:CDS 35.0%
ATTCCATCTTGTTGATCTCA+GGG + chr3_4:80747666-80747685 Msa0526710:CDS 35.0%
AACTGCTTAACGGTTACTAA+AGG + chr3_4:80747697-80747716 Msa0526710:CDS 35.0%
ACTGCTTAACGGTTACTAAA+GGG + chr3_4:80747698-80747717 Msa0526710:CDS 35.0%
TCAATATGATTGAAGCTGCT+AGG + chr3_4:80747818-80747837 Msa0526710:CDS 35.0%
ATTGAAGCTGCTAGGATTAA+TGG + chr3_4:80747826-80747845 Msa0526710:CDS 35.0%
AACTACTAATGTCAGCTTGA+AGG + chr3_4:80748031-80748050 Msa0526710:CDS 35.0%
!!! TATATGGTCCTTTTGGAACA+TGG + chr3_4:80748278-80748297 Msa0526710:CDS 35.0%
ATACCTTTCCATGTTCCAAA+AGG - chr3_4:80748289-80748308 None:intergenic 35.0%
!! AGTTTGTTGCTTTGTCATAC+AGG + chr3_4:80748403-80748422 Msa0526710:intron 35.0%
! CTACAGACAAATTTGAGATG+TGG + chr3_4:80748473-80748492 Msa0526710:CDS 35.0%
! ACAGACAAATTTGAGATGTG+GGG + chr3_4:80748475-80748494 Msa0526710:CDS 35.0%
TTCAACACACTCATCAATGA+AGG - chr3_4:80748527-80748546 None:intergenic 35.0%
TTCATTGATGAGTGTGTTGA+AGG + chr3_4:80748526-80748545 Msa0526710:CDS 35.0%
CAGCTCAAACATGAAAAGTT+TGG - chr3_4:80748689-80748708 None:intergenic 35.0%
TTCATGTTTGAGCTGTTCTA+AGG + chr3_4:80748694-80748713 Msa0526710:intron 35.0%
TCATGTTTGAGCTGTTCTAA+GGG + chr3_4:80748695-80748714 Msa0526710:intron 35.0%
TTGGGATAGGGAAAATGATA+CGG + chr3_4:80748839-80748858 Msa0526710:intron 35.0%
TATGATAAGCCCTGACAATT+TGG + chr3_4:80748903-80748922 Msa0526710:intron 35.0%
AACAACAGACCAAATTGTCA+GGG - chr3_4:80748915-80748934 None:intergenic 35.0%
TAACAACAGACCAAATTGTC+AGG - chr3_4:80748916-80748935 None:intergenic 35.0%
TAAGACACAAGAAAGAAGGA+AGG - chr3_4:80749167-80749186 None:intergenic 35.0%
! CACTTTCTGAAAGAAGATGA+AGG - chr3_4:80749213-80749232 None:intergenic 35.0%
GGATTAAGGAACAACTTGAA+AGG + chr3_4:80749392-80749411 Msa0526710:CDS 35.0%
AGCAGTGAAGTAAATGTTTC+CGG + chr3_4:80749540-80749559 Msa0526710:three_prime_UTR 35.0%
ATATAAAGCACACTCTTCTC+CGG - chr3_4:80749562-80749581 None:intergenic 35.0%
CACGTTATTTATGCGTAGAT+CGG + chr3_4:80749623-80749642 Msa0526710:three_prime_UTR 35.0%
!! ACCGACAAGTGCTTTAAAAA+AGG - chr3_4:80749682-80749701 None:intergenic 35.0%
GATATTAGTGTATGTAGTGC+CGG + chr3_4:80749839-80749858 Msa0526710:three_prime_UTR 35.0%
TGTCTTTGTGTGGAAGTAGA+TGG + chr3_4:80746521-80746540 Msa0526710:five_prime_UTR 40.0%
ATATATAGGACGAGAAGGGA+AGG - chr3_4:80746605-80746624 None:intergenic 40.0%
!! GTTTGAGTTGAGAAGGCAAT+TGG - chr3_4:80746657-80746676 None:intergenic 40.0%
!! AGGTTTGGTTTGAGTTGAGA+AGG - chr3_4:80746664-80746683 None:intergenic 40.0%
ATGTATGGAGAGAAGAGGTT+TGG - chr3_4:80746679-80746698 None:intergenic 40.0%
CAATTGATATGCTAGGACGT+AGG - chr3_4:80747187-80747206 None:intergenic 40.0%
! ATACAAGACATGAAGGCACA+TGG - chr3_4:80747347-80747366 None:intergenic 40.0%
CTCTCTCTCAAGATTCTCAT+AGG - chr3_4:80747488-80747507 None:intergenic 40.0%
AAAATTTCCATCACTGGTGC+TGG + chr3_4:80747532-80747551 Msa0526710:CDS 40.0%
AAATTTCCATCACTGGTGCT+GGG + chr3_4:80747533-80747552 Msa0526710:CDS 40.0%
GAAAAATGAGCACATGACTG+AGG + chr3_4:80747627-80747646 Msa0526710:CDS 40.0%
GGTCATGGATAACTGCTTAA+CGG + chr3_4:80747687-80747706 Msa0526710:CDS 40.0%
CTGCTTAACGGTTACTAAAG+GGG + chr3_4:80747699-80747718 Msa0526710:CDS 40.0%
TTTCAATCTTGCCGCTGATA+TGG + chr3_4:80747732-80747751 Msa0526710:CDS 40.0%
TTCAATCTTGCCGCTGATAT+GGG + chr3_4:80747733-80747752 Msa0526710:CDS 40.0%
TTTAGCCACAAGATGCGTAT+GGG + chr3_4:80748170-80748189 Msa0526710:intron 40.0%
GGGAGGTTCCATAACATATA+TGG + chr3_4:80748262-80748281 Msa0526710:CDS 40.0%
!! TTGTTGCTTTGTCATACAGG+TGG + chr3_4:80748406-80748425 Msa0526710:intron 40.0%
! AAATTTGAGATGTGGGGAGA+TGG + chr3_4:80748481-80748500 Msa0526710:CDS 40.0%
! AGTGTGTTGAAGGTGTACTT+AGG + chr3_4:80748536-80748555 Msa0526710:CDS 40.0%
! TGTTGAAGGTGTACTTAGGT+AGG + chr3_4:80748540-80748559 Msa0526710:intron 40.0%
TCTTGGCTGATTGTTTGGTT+TGG + chr3_4:80748563-80748582 Msa0526710:intron 40.0%
! TGTTGATTGAGTGAGCTAAC+TGG - chr3_4:80748756-80748775 None:intergenic 40.0%
TATCCGTAATTGGTTGGGAT+AGG + chr3_4:80748826-80748845 Msa0526710:intron 40.0%
ATCCGTAATTGGTTGGGATA+GGG + chr3_4:80748827-80748846 Msa0526710:intron 40.0%
TTCCCTATCCCAACCAATTA+CGG - chr3_4:80748832-80748851 None:intergenic 40.0%
!!! TGAGATCGTTCTTGGTTTTG+AGG + chr3_4:80749015-80749034 Msa0526710:CDS 40.0%
ACTCCTATACATCACATTCC+TGG + chr3_4:80749046-80749065 Msa0526710:CDS 40.0%
AGAAGATGAAGGAGCCAAAT+TGG - chr3_4:80749202-80749221 None:intergenic 40.0%
GGTCTTGATACATCAGGATA+CGG + chr3_4:80749427-80749446 Msa0526710:CDS 40.0%
CACAACTGTGGAAGTAACAA+TGG - chr3_4:80749914-80749933 None:intergenic 40.0%
! TGAGTTGAGAAGGCAATTGG+TGG - chr3_4:80746654-80746673 None:intergenic 45.0%
ACACACCAAGTGCAGATAAG+TGG + chr3_4:80747145-80747164 Msa0526710:intron 45.0%
CACACCAAGTGCAGATAAGT+GGG + chr3_4:80747146-80747165 Msa0526710:intron 45.0%
ACACCAAGTGCAGATAAGTG+GGG + chr3_4:80747147-80747166 Msa0526710:intron 45.0%
ATTCCCCACTTATCTGCACT+TGG - chr3_4:80747153-80747172 None:intergenic 45.0%
ATCTTGAGAGAGAGCCTTAC+TGG + chr3_4:80747494-80747513 Msa0526710:CDS 45.0%
! AGCTTTTCTGATGGCCAGTA+AGG - chr3_4:80747511-80747530 None:intergenic 45.0%
! AATTTCCATCACTGGTGCTG+GGG + chr3_4:80747534-80747553 Msa0526710:CDS 45.0%
TGACCCTGAGATCAACAAGA+TGG - chr3_4:80747672-80747691 None:intergenic 45.0%
TCTTGTTGATCTCAGGGTCA+TGG + chr3_4:80747672-80747691 Msa0526710:CDS 45.0%
CAGCGGCAAGATTGAAAACA+TGG - chr3_4:80747729-80747748 None:intergenic 45.0%
AGGGTAGATACAAGCACTTG+AGG - chr3_4:80747994-80748013 None:intergenic 45.0%
!! GGTTTGTTCGCGATTCCTTT+TGG + chr3_4:80748076-80748095 Msa0526710:intron 45.0%
GTTTAGCCACAAGATGCGTA+TGG + chr3_4:80748169-80748188 Msa0526710:intron 45.0%
TGTTATGGAACCTCCCAATG+CGG - chr3_4:80748258-80748277 None:intergenic 45.0%
!!! GGTCCTTTTGGAACATGGAA+AGG + chr3_4:80748283-80748302 Msa0526710:CDS 45.0%
TGCTTTGTCATACAGGTGGA+AGG + chr3_4:80748410-80748429 Msa0526710:intron 45.0%
GCTTTGTCATACAGGTGGAA+GGG + chr3_4:80748411-80748430 Msa0526710:intron 45.0%
AGGTGTACTTAGGTAGGTCT+TGG + chr3_4:80748546-80748565 Msa0526710:intron 45.0%
GTAGGTCTTGGCTGATTGTT+TGG + chr3_4:80748558-80748577 Msa0526710:intron 45.0%
!! TTCCAATATTTACCGGCTCG+CGG - chr3_4:80748964-80748983 None:intergenic 45.0%
GATGGTCAGCATGAATGAGA+TGG + chr3_4:80748991-80749010 Msa0526710:CDS 45.0%
GGCTCCAACAATGAAGTTGA+AGG + chr3_4:80749129-80749148 Msa0526710:CDS 45.0%
GGCTGAGGATTACATATGTC+TGG + chr3_4:80749371-80749390 Msa0526710:CDS 45.0%
GGAACAACTTGAAAGGGAGA+AGG + chr3_4:80749399-80749418 Msa0526710:CDS 45.0%
GCTCAAGGTCTTGATACATC+AGG + chr3_4:80749421-80749440 Msa0526710:CDS 45.0%
AGGATACGGCTCATCAAAAG+TGG + chr3_4:80749441-80749460 Msa0526710:CDS 45.0%
! TTAAAGCACTTGTCGGTGCT+TGG + chr3_4:80749685-80749704 Msa0526710:three_prime_UTR 45.0%
! TAAAGCACTTGTCGGTGCTT+GGG + chr3_4:80749686-80749705 Msa0526710:three_prime_UTR 45.0%
! CAAGACATGAAGGCACATGG+TGG - chr3_4:80747344-80747363 None:intergenic 50.0%
! TTCTGCAGGATGGGAAGTAC+TGG + chr3_4:80747439-80747458 Msa0526710:intron 50.0%
! ATTTCCATCACTGGTGCTGG+GGG + chr3_4:80747535-80747554 Msa0526710:CDS 50.0%
AATCTTGCCGCTGATATGGG+TGG + chr3_4:80747736-80747755 Msa0526710:CDS 50.0%
ACCCATTCCACCCATATCAG+CGG - chr3_4:80747746-80747765 None:intergenic 50.0%
GCTTGAAGGAGTCTGATGCA+TGG + chr3_4:80748045-80748064 Msa0526710:CDS 50.0%
AATCGCGAACAAACCTCAGC+AGG - chr3_4:80748071-80748090 None:intergenic 50.0%
TCTAGCCCATACGCATCTTG+TGG - chr3_4:80748178-80748197 None:intergenic 50.0%
GCTAGAGAAGCTTGCAACAG+AGG + chr3_4:80748192-80748211 Msa0526710:CDS 50.0%
! TTCGGAATTGAGTGCCGCAT+TGG + chr3_4:80748241-80748260 Msa0526710:CDS 50.0%
! TCGGAATTGAGTGCCGCATT+GGG + chr3_4:80748242-80748261 Msa0526710:CDS 50.0%
TCATACAGGTGGAAGGGAGA+AGG + chr3_4:80748417-80748436 Msa0526710:intron 50.0%
!!! AGGCTCCTGCTGCTTTTTGT+CGG + chr3_4:80748437-80748456 Msa0526710:CDS 50.0%
GCTTTCCGACAAAAAGCAGC+AGG - chr3_4:80748445-80748464 None:intergenic 50.0%
TAAATCCGATTTCCGCGAGC+CGG + chr3_4:80748949-80748968 Msa0526710:CDS 50.0%
!! ATTTACCGGCTCGCGGAAAT+CGG - chr3_4:80748957-80748976 None:intergenic 50.0%
TTCCGCGAGCCGGTAAATAT+TGG + chr3_4:80748959-80748978 Msa0526710:CDS 50.0%
GAGATGGCTGAGATCGTTCT+TGG + chr3_4:80749007-80749026 Msa0526710:CDS 50.0%
GGGCCAGGAATGTGATGTAT+AGG - chr3_4:80749052-80749071 None:intergenic 50.0%
!! TGGTATTGTAGGATGGGCTG+AGG + chr3_4:80749356-80749375 Msa0526710:intron 50.0%
CTTGAAAGGGAGAAGGCTCA+AGG + chr3_4:80749406-80749425 Msa0526710:CDS 50.0%
CGAAGTGAGCCTAATTGGAC+CGG - chr3_4:80749481-80749500 None:intergenic 50.0%
CGGTCCAATTAGGCTCACTT+CGG + chr3_4:80749479-80749498 Msa0526710:CDS 50.0%
GGTCCAATTAGGCTCACTTC+GGG + chr3_4:80749480-80749499 Msa0526710:CDS 50.0%
GCTCAATAGGGTCGATGTCA+TGG + chr3_4:80749586-80749605 Msa0526710:three_prime_UTR 50.0%
! AAAGCACTTGTCGGTGCTTG+GGG + chr3_4:80749687-80749706 Msa0526710:three_prime_UTR 50.0%
AAAACCCCCAGCACCAGTGA+TGG - chr3_4:80747542-80747561 None:intergenic 55.0%
TTATCGCGTCGCACTTAGCG+CGG + chr3_4:80747560-80747579 Msa0526710:CDS 55.0%
TGCCGCTGATATGGGTGGAA+TGG + chr3_4:80747741-80747760 Msa0526710:CDS 55.0%
GCCGCTGATATGGGTGGAAT+GGG + chr3_4:80747742-80747761 Msa0526710:CDS 55.0%
! GAATTGAGTGCCGCATTGGG+AGG + chr3_4:80748245-80748264 Msa0526710:CDS 55.0%
ACATCACATTCCTGGCCCAG+AGG + chr3_4:80749054-80749073 Msa0526710:CDS 55.0%
CATCACATTCCTGGCCCAGA+GGG + chr3_4:80749055-80749074 Msa0526710:CDS 55.0%
TACGACCACGAACACCCTCT+GGG - chr3_4:80749072-80749091 None:intergenic 55.0%
TTACGACCACGAACACCCTC+TGG - chr3_4:80749073-80749092 None:intergenic 55.0%
AGTGGTGCAAACCCAAGCAC+CGG + chr3_4:80749459-80749478 Msa0526710:CDS 55.0%
!! ACCCAAGCACCGGTCCAATT+AGG + chr3_4:80749469-80749488 Msa0526710:CDS 55.0%
GCCTAATTGGACCGGTGCTT+GGG - chr3_4:80749473-80749492 None:intergenic 55.0%
AGCCTAATTGGACCGGTGCT+TGG - chr3_4:80749474-80749493 None:intergenic 55.0%
CTGCCCGAAGTGAGCCTAAT+TGG - chr3_4:80749486-80749505 None:intergenic 55.0%
! AAGCACTTGTCGGTGCTTGG+GGG + chr3_4:80749688-80749707 Msa0526710:three_prime_UTR 55.0%
CTTAGCGCGGCGTCTCAAGA+AGG + chr3_4:80747573-80747592 Msa0526710:CDS 60.0%
GTCTGATGCATGGCCTGCTG+AGG + chr3_4:80748055-80748074 Msa0526710:CDS 60.0%
AGCGCGGCGTCTCAAGAAGG+AGG + chr3_4:80747576-80747595 Msa0526710:CDS 65.0%
GCGCGGCGTCTCAAGAAGGA+GGG + chr3_4:80747577-80747596 Msa0526710:CDS 65.0%
GGCTCACTTCGGGCAGCAGA+CGG + chr3_4:80749490-80749509 Msa0526710:CDS 65.0%
! CACTTGTCGGTGCTTGGGGG+TGG + chr3_4:80749691-80749710 Msa0526710:three_prime_UTR 65.0%
CCACGAACACCCTCTGGGCC+AGG - chr3_4:80749067-80749086 None:intergenic 70.0%
!! CCTGGCCCAGAGGGTGTTCG+TGG + chr3_4:80749064-80749083 Msa0526710:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 80746500 80749968 80746500 ID=Msa0526710;Name=Msa0526710
chr3_4 mRNA 80746500 80749968 80746500 ID=Msa0526710-mRNA-1;Parent=Msa0526710;Name=Msa0526710-mRNA-1;_AED=0.08;_eAED=0.08;_QI=218|1|1|1|0.83|0.71|7|440|379
chr3_4 exon 80746500 80746716 80746500 ID=Msa0526710-mRNA-1:exon:24259;Parent=Msa0526710-mRNA-1
chr3_4 exon 80747447 80747857 80747447 ID=Msa0526710-mRNA-1:exon:24260;Parent=Msa0526710-mRNA-1
chr3_4 exon 80747980 80748076 80747980 ID=Msa0526710-mRNA-1:exon:24261;Parent=Msa0526710-mRNA-1
chr3_4 exon 80748175 80748304 80748175 ID=Msa0526710-mRNA-1:exon:24262;Parent=Msa0526710-mRNA-1
chr3_4 exon 80748425 80748557 80748425 ID=Msa0526710-mRNA-1:exon:24263;Parent=Msa0526710-mRNA-1
chr3_4 exon 80748943 80749150 80748943 ID=Msa0526710-mRNA-1:exon:24264;Parent=Msa0526710-mRNA-1
chr3_4 exon 80749367 80749968 80749367 ID=Msa0526710-mRNA-1:exon:24265;Parent=Msa0526710-mRNA-1
chr3_4 five_prime_UTR 80746500 80746716 80746500 ID=Msa0526710-mRNA-1:five_prime_utr;Parent=Msa0526710-mRNA-1
chr3_4 five_prime_UTR 80747447 80747447 80747447 ID=Msa0526710-mRNA-1:five_prime_utr;Parent=Msa0526710-mRNA-1
chr3_4 CDS 80747448 80747857 80747448 ID=Msa0526710-mRNA-1:cds;Parent=Msa0526710-mRNA-1
chr3_4 CDS 80747980 80748076 80747980 ID=Msa0526710-mRNA-1:cds;Parent=Msa0526710-mRNA-1
chr3_4 CDS 80748175 80748304 80748175 ID=Msa0526710-mRNA-1:cds;Parent=Msa0526710-mRNA-1
chr3_4 CDS 80748425 80748557 80748425 ID=Msa0526710-mRNA-1:cds;Parent=Msa0526710-mRNA-1
chr3_4 CDS 80748943 80749150 80748943 ID=Msa0526710-mRNA-1:cds;Parent=Msa0526710-mRNA-1
chr3_4 CDS 80749367 80749528 80749367 ID=Msa0526710-mRNA-1:cds;Parent=Msa0526710-mRNA-1
chr3_4 three_prime_UTR 80749529 80749968 80749529 ID=Msa0526710-mRNA-1:three_prime_utr;Parent=Msa0526710-mRNA-1
Gene Sequence

>Msa0526710

ATGGGAAGTACTGGAAAAACTAACTATGGAGAATACACCTATGAGAATCTTGAGAGAGAGCCTTACTGGCCATCAGAAAAGCTTAAAATTTCCATCACTGGTGCTGGGGGTTTTATCGCGTCGCACTTAGCGCGGCGTCTCAAGAAGGAGGGACATTACATTATTGCTTCTGACTGGAAGAAAAATGAGCACATGACTGAGGACATGTTCTGTGATGAATTCCATCTTGTTGATCTCAGGGTCATGGATAACTGCTTAACGGTTACTAAAGGGGTTGACCATGTTTTCAATCTTGCCGCTGATATGGGTGGAATGGGTTTTATTCAGTCCAATCATTCTGTTATTATGTATAACAACACAATGATTAGTTTCAATATGATTGAAGCTGCTAGGATTAATGGAATTAAGAGGTTCTTCTATGCCTCAAGTGCTTGTATCTACCCTGAATTTAAACAGTTAGAAACTACTAATGTCAGCTTGAAGGAGTCTGATGCATGGCCTGCTGAGCCACAAGATGCGTATGGGCTAGAGAAGCTTGCAACAGAGGAGATTTGCAAGCACTACAACAAAGATTTCGGAATTGAGTGCCGCATTGGGAGGTTCCATAACATATATGGTCCTTTTGGAACATGGAAAGGTGGAAGGGAGAAGGCTCCTGCTGCTTTTTGTCGGAAAGCAATCACGTCTACAGACAAATTTGAGATGTGGGGAGATGGTTTGCAAACACGATCATTTACCTTCATTGATGAGTGTGTTGAAGGTGTACTTAGACTGACTAAATCCGATTTCCGCGAGCCGGTAAATATTGGAAGTGATGAGATGGTCAGCATGAATGAGATGGCTGAGATCGTTCTTGGTTTTGAGGACAAGAAGACTCCTATACATCACATTCCTGGCCCAGAGGGTGTTCGTGGTCGTAACTCAGACAATACACTAATAAAAGAGAAACTTGGCTGGGCTCCAACAATGAAGTTGAAGGATGGGCTGAGGATTACATATGTCTGGATTAAGGAACAACTTGAAAGGGAGAAGGCTCAAGGTCTTGATACATCAGGATACGGCTCATCAAAAGTGGTGCAAACCCAAGCACCGGTCCAATTAGGCTCACTTCGGGCAGCAGACGGCAAAGAGAGTAGTTAA

Protein sequence

>Msa0526710

MGSTGKTNYGEYTYENLEREPYWPSEKLKISITGAGGFIASHLARRLKKEGHYIIASDWKKNEHMTEDMFCDEFHLVDLRVMDNCLTVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEEICKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFEDKKTPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRITYVWIKEQLEREKAQGLDTSGYGSSKVVQTQAPVQLGSLRAADGKESS*