AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1237030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1237030 MtrunA17_Chr8g0347681 99.550 222 1 0 1 222 63 284 1.79e-158 439
Msa1237030 MtrunA17_Chr2g0330111 57.848 223 93 1 1 222 108 330 2.24e-86 259
Msa1237030 MtrunA17_Chr8g0380761 30.093 216 146 3 1 212 78 292 2.19e-24 98.2
Msa1237030 MtrunA17_Chr8g0389841 28.837 215 150 3 5 217 102 315 4.90e-23 94.7
Msa1237030 MtrunA17_Chr2g0292541 27.119 236 152 4 1 216 102 337 9.59e-15 72.0
Msa1237030 MtrunA17_Chr6g0478521 28.652 178 115 4 52 221 441 614 1.36e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1237030 AT3G25530.1 80.717 223 42 1 1 222 63 285 4.42e-128 363
Msa1237030 AT3G25530.2 76.126 222 43 1 1 222 63 274 3.06e-119 340
Msa1237030 AT1G17650.2 59.193 223 90 1 1 222 70 292 2.14e-88 263
Msa1237030 AT1G17650.1 59.193 223 90 1 1 222 129 351 8.02e-88 263
Msa1237030 AT3G25530.3 79.021 143 29 1 1 142 63 205 8.34e-78 233
Msa1237030 AT4G29120.1 29.767 215 148 3 5 217 104 317 7.48e-20 86.7
Msa1237030 AT4G20930.2 32.536 209 122 5 27 217 57 264 3.87e-19 84.0
Msa1237030 AT4G20930.1 32.536 209 122 5 27 217 129 336 1.11e-18 83.6
Msa1237030 AT1G18270.4 28.448 232 151 6 1 221 384 611 8.78e-17 79.3
Msa1237030 AT1G18270.1 28.448 232 151 6 1 221 384 611 9.08e-17 79.3
Msa1237030 AT1G18270.2 28.448 232 151 6 1 221 385 612 9.08e-17 79.3
Msa1237030 AT1G18270.3 28.448 232 151 6 1 221 384 611 9.36e-17 79.0
Msa1237030 AT1G71170.1 27.103 214 150 3 10 222 85 293 6.62e-13 67.0

Find 91 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTCCAGTGTAATAGTATT+TGG 0.145162 8_2:-16292167 None:intergenic
CGGAAAGAAATCTTTCTTTC+TGG 0.164012 8_2:+16290566 Msa1237030:CDS
TTTAAACATGCCGTTACTTA+TGG 0.260989 8_2:-16291325 None:intergenic
TTTCTTGAAGCTCCTGTTTC+GGG 0.271355 8_2:+16289225 Msa1237030:CDS
GTCTCCCAACCCCATGCTTC+TGG 0.280528 8_2:-16291789 None:intergenic
CAATATATCAGAGCCATTAA+TGG 0.299577 8_2:-16287257 None:intergenic
GCCTAAAACATTTATGTTAC+CGG 0.306667 8_2:-16292102 None:intergenic
GGTGTTCTTGAGCAAATTAA+TGG 0.309456 8_2:+16288619 Msa1237030:CDS
CTTTCTTGAAGCTCCTGTTT+CGG 0.310097 8_2:+16289224 Msa1237030:CDS
GATTTATAATCATCCATTAA+TGG 0.312314 8_2:+16287244 Msa1237030:five_prime_UTR
CTATTCATATACCTCTTAAA+TGG 0.317792 8_2:-16292124 None:intergenic
GGAAAGAAATCTTTCTTTCT+GGG 0.319830 8_2:+16290567 Msa1237030:CDS
ATCTGATCCTGCAGCTGCTT+TGG 0.357743 8_2:+16288493 Msa1237030:CDS
CATTTATGTTACCGGACATA+TGG 0.364877 8_2:-16292094 None:intergenic
TGCGCGCGCACTCTGTGCAT+TGG 0.376513 8_2:-16292198 None:intergenic
ATATTGATTGATGATTATAA+AGG 0.392346 8_2:+16287274 Msa1237030:five_prime_UTR
TTTCTGGGTGAGGTTGGAAA+TGG 0.402461 8_2:+16290582 Msa1237030:CDS
CTTGTTGTCAACATGGTAAT+GGG 0.402762 8_2:+16290618 Msa1237030:CDS
CTTGAGCAAATTAATGGAAA+AGG 0.410887 8_2:+16288625 Msa1237030:CDS
ACTCCAGTGTAATAGTATTT+GGG 0.415175 8_2:-16292166 None:intergenic
CCTTCTACGACATGGCTTCA+AGG 0.424952 8_2:+16287423 Msa1237030:five_prime_UTR
ATGGCTTCAAGGTCACTGTT+TGG 0.430943 8_2:+16287434 Msa1237030:five_prime_UTR
GCTGCAGCTGCGACAGGCAT+TGG 0.436252 8_2:-16291456 None:intergenic
ATGAGACTGGCTCTGGCCCT+TGG 0.440934 8_2:+16291417 Msa1237030:CDS
TAAACCACATATATATGAAA+TGG 0.445068 8_2:+16291927 Msa1237030:three_prime_UTR
TCATTTGCTGCAGCTGCGAC+AGG 0.445970 8_2:-16291462 None:intergenic
CATTTCTTGACAACAGCTGC+AGG 0.447963 8_2:-16288449 None:intergenic
GAAATCTTTCTTTCTGGGTG+AGG 0.451195 8_2:+16290572 Msa1237030:CDS
CATTTAAGAGGTATATGAAT+AGG 0.453653 8_2:+16292125 Msa1237030:three_prime_UTR
TCTTTCTTTCTGGGTGAGGT+TGG 0.457974 8_2:+16290576 Msa1237030:CDS
TATTAGCTAGCGCATGGATT+CGG 0.463266 8_2:+16292039 Msa1237030:three_prime_UTR
GGCTTCTTACTACCCGAAAC+AGG 0.467901 8_2:-16289237 None:intergenic
ATTGATGATTATAAAGGAAA+GGG 0.468687 8_2:+16287280 Msa1237030:five_prime_UTR
GCGCGCGCACTCTGTGCATT+GGG 0.476175 8_2:-16292197 None:intergenic
AACGGCATGTTTAAATTGAA+AGG 0.477158 8_2:+16291333 Msa1237030:CDS
TCACTTGCAGTAGATTGTAT+TGG 0.477324 8_2:+16292071 Msa1237030:three_prime_UTR
CCTTGAAGCCATGTCGTAGA+AGG 0.480862 8_2:-16287423 None:intergenic
AAAGCCAGAAGCATGGGGTT+GGG 0.482519 8_2:+16291785 Msa1237030:CDS
ACTAGTTGGCCATCTTCTGC+AGG 0.484133 8_2:-16289258 None:intergenic
TTCAAGAAAGCCAGAAGCAT+GGG 0.486636 8_2:+16291779 Msa1237030:CDS
TGATGTTTCAGTGGAAAAGC+AGG 0.487430 8_2:-16291384 None:intergenic
GATTGTATTGGCCATATGTC+CGG 0.491639 8_2:+16292083 Msa1237030:three_prime_UTR
TGATCCTGCAGCTGCTTTGG+CGG 0.494937 8_2:+16288496 Msa1237030:CDS
GAAAGCCAGAAGCATGGGGT+TGG 0.500182 8_2:+16291784 Msa1237030:CDS
ACTTGTTGTCAACATGGTAA+TGG 0.503001 8_2:+16290617 Msa1237030:CDS
ACAGCCATTTCATATATATG+TGG 0.504565 8_2:-16291931 None:intergenic
TAGGTGGTGTTTGATAAGGA+TGG 0.509964 8_2:+16288598 Msa1237030:intron
AGTAAGAAGCCTGCAGAAGA+TGG 0.513694 8_2:+16289249 Msa1237030:CDS
GAAGGACATGAGACTGGCTC+TGG 0.513772 8_2:+16291410 Msa1237030:CDS
TTTCCGAGTACATCAAATGC+TGG 0.514724 8_2:-16290549 None:intergenic
GAAGAGTGCAAAAGTTTACA+AGG 0.515489 8_2:-16292002 None:intergenic
CTTCCAGCATTTGATGTACT+CGG 0.515625 8_2:+16290546 Msa1237030:CDS
TAGCACACTTCTTGATGTGC+TGG 0.519966 8_2:+16291215 Msa1237030:CDS
GATTGATGATTATAAAGGAA+AGG 0.522726 8_2:+16287279 Msa1237030:five_prime_UTR
CTACAGGCAATCAAAGCAAA+AGG 0.523095 8_2:+16289195 Msa1237030:intron
ATATATGAAATGGCTGTTTG+AGG 0.523369 8_2:+16291937 Msa1237030:three_prime_UTR
TGTCGCAGCTGCAGCAAATG+AGG 0.525255 8_2:+16291464 Msa1237030:CDS
CGGCAGCAAGTATAACTAGT+TGG 0.527224 8_2:-16289272 None:intergenic
CTGACCGCCAAAGCAGCTGC+AGG 0.542754 8_2:-16288500 None:intergenic
ATACCCAAATACTATTACAC+TGG 0.544996 8_2:+16292163 Msa1237030:three_prime_UTR
ATGATGAATGCTTTCTCTGA+GGG 0.550025 8_2:+16291159 Msa1237030:CDS
TGAAATGGCTGTTTGAGGAT+AGG 0.552450 8_2:+16291942 Msa1237030:three_prime_UTR
GTGGAACATGGTGCTACAGT+TGG 0.563718 8_2:+16288419 Msa1237030:five_prime_UTR
AGCACATCAAGAAGTGTGCT+AGG 0.569454 8_2:-16291213 None:intergenic
TCCTTCTGCTGATGTTTCAG+TGG 0.571359 8_2:-16291393 None:intergenic
ATTCAAGAAAGCCAGAAGCA+TGG 0.581643 8_2:+16291778 Msa1237030:CDS
TCGTAGAAGGTTAATTGACA+TGG 0.582120 8_2:-16287410 None:intergenic
GATCTTGGGGCCATAAGTAA+CGG 0.585908 8_2:+16291315 Msa1237030:CDS
TCCACTGAAACATCAGCAGA+AGG 0.591596 8_2:+16291392 Msa1237030:CDS
CAACTAGTTATACTTGCTGC+CGG 0.591719 8_2:+16289273 Msa1237030:CDS
CTGACACTTGCTGAAAGAAG+TGG 0.597037 8_2:+16291183 Msa1237030:CDS
TGGTGACCATTGTAAGAGAG+AGG 0.599182 8_2:-16287465 None:intergenic
TCAGCAGAAGGACATGAGAC+TGG 0.601633 8_2:+16291404 Msa1237030:CDS
TATACTTGCTGCCGGAGACA+AGG 0.610187 8_2:+16289281 Msa1237030:CDS
GATGTTTCAGTGGAAAAGCA+GGG 0.610233 8_2:-16291383 None:intergenic
GGTGACCATTGTAAGAGAGA+GGG 0.614222 8_2:-16287464 None:intergenic
AATGAAACTTGTTGTCAACA+TGG 0.623343 8_2:+16290611 Msa1237030:CDS
TCAATTAACCTTCTACGACA+TGG 0.625289 8_2:+16287415 Msa1237030:five_prime_UTR
GACATCTATCAAGATATCTG+AGG 0.630486 8_2:+16288678 Msa1237030:CDS
AGGAAAGGGTCTTTATCGAG+AGG 0.633353 8_2:+16287294 Msa1237030:five_prime_UTR
GCACATCAAGAAGTGTGCTA+GGG 0.636852 8_2:-16291212 None:intergenic
TTGTCAACATGGTAATGGGA+AGG 0.637666 8_2:+16290622 Msa1237030:CDS
GATAGATGTCTCAGCATCAA+CGG 0.646112 8_2:-16288665 None:intergenic
TATGATGAATGCTTTCTCTG+AGG 0.646238 8_2:+16291158 Msa1237030:CDS
ATGGTAGTGTGATGAACTCG+TGG 0.651669 8_2:+16288400 Msa1237030:intron
ATTTGGGTATAACACACACA+AGG 0.654828 8_2:-16292150 None:intergenic
TGTGATGAACTCGTGGAACA+TGG 0.661566 8_2:+16288407 Msa1237030:five_prime_UTR
ATGTTTCAGTGGAAAAGCAG+GGG 0.666554 8_2:-16291382 None:intergenic
CAGGCAATCAAAGCAAAAGG+TGG 0.667806 8_2:+16289198 Msa1237030:intron
TCAAGAAAGCCAGAAGCATG+GGG 0.690032 8_2:+16291780 Msa1237030:CDS
TTTGGGTATAACACACACAA+GGG 0.699566 8_2:-16292149 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAGAATAAGAAATAAA+AGG - chr8_2:16287622-16287641 None:intergenic 10.0%
!!! TATTTTCTTTTTGTTATGAT+TGG - chr8_2:16287184-16287203 None:intergenic 15.0%
!!! ATATTGATTGATGATTATAA+AGG + chr8_2:16287274-16287293 Msa1237030:five_prime_UTR 15.0%
!!! ATCCTATTTGTTTTTTTTTT+AGG + chr8_2:16287976-16287995 Msa1237030:intron 15.0%
!!! TCCTATTTGTTTTTTTTTTA+GGG + chr8_2:16288034-16288053 Msa1237030:intron 15.0%
!!! ATTGAAAGTTTCTATTTTTA+GGG + chr8_2:16288795-16288814 Msa1237030:intron 15.0%
!! TAAGTTATTTATCAAAAACA+CGG - chr8_2:16290758-16290777 None:intergenic 15.0%
!! GATTTATAATCATCCATTAA+TGG + chr8_2:16287244-16287263 Msa1237030:five_prime_UTR 20.0%
!!! ATTGATGATTATAAAGGAAA+GGG + chr8_2:16287280-16287299 Msa1237030:five_prime_UTR 20.0%
!! TAAGAATAAGAAATAAAAGG+TGG - chr8_2:16287619-16287638 None:intergenic 20.0%
!! ACCCTAAAAAAAAAACAAAT+AGG - chr8_2:16288038-16288057 None:intergenic 20.0%
!! CTTATGTATAATAAGCTATT+TGG - chr8_2:16288268-16288287 None:intergenic 20.0%
!!! TGCAGTTATTATTTTGAATT+TGG + chr8_2:16288770-16288789 Msa1237030:intron 20.0%
!! CTAAAAATAGAAACTTTCAA+TGG - chr8_2:16288796-16288815 None:intergenic 20.0%
!!! CATTGAAAGTTTCTATTTTT+AGG + chr8_2:16288794-16288813 Msa1237030:intron 20.0%
!! TAATTCTTGCATTCAAAATT+AGG - chr8_2:16288899-16288918 None:intergenic 20.0%
!! TAAGTTGCAATTTATATCAA+AGG - chr8_2:16289159-16289178 None:intergenic 20.0%
!! TTCAATAATGCAATCTAAAA+TGG - chr8_2:16289682-16289701 None:intergenic 20.0%
!! TTTAGATTGCATTATTGAAA+AGG + chr8_2:16289683-16289702 Msa1237030:intron 20.0%
!! GAAAATAAAGTTGTTAGAAA+AGG + chr8_2:16289730-16289749 Msa1237030:intron 20.0%
!!! TTGTAGTTTTTCATTTTCAA+CGG - chr8_2:16290452-16290471 None:intergenic 20.0%
!!! CCACTGAAATTTAATTTATA+TGG - chr8_2:16290490-16290509 None:intergenic 20.0%
!! CCATATAAATTAAATTTCAG+TGG + chr8_2:16290487-16290506 Msa1237030:intron 20.0%
!! TATAAATTAAATTTCAGTGG+TGG + chr8_2:16290490-16290509 Msa1237030:intron 20.0%
!! CTAATCTGAATTTATCTAAT+AGG - chr8_2:16291008-16291027 None:intergenic 20.0%
!! ATTCTCAGAATGTTAATAAA+AGG - chr8_2:16291275-16291294 None:intergenic 20.0%
!!! ATATCTGTGATATTTTTTGA+AGG + chr8_2:16291293-16291312 Msa1237030:intron 20.0%
!! TAAACCACATATATATGAAA+TGG + chr8_2:16291927-16291946 Msa1237030:three_prime_UTR 20.0%
!! GATTGATGATTATAAAGGAA+AGG + chr8_2:16287279-16287298 Msa1237030:five_prime_UTR 25.0%
!! AAAATGGAGATTGGATTTTT+AGG + chr8_2:16287367-16287386 Msa1237030:five_prime_UTR 25.0%
! GTTGAATGAAAAAAAACCAT+TGG - chr8_2:16287585-16287604 None:intergenic 25.0%
! AATAAGAAATAAAAGGTGGT+GGG - chr8_2:16287615-16287634 None:intergenic 25.0%
! ATAAGCACTTATTTCATAAG+TGG + chr8_2:16288283-16288302 Msa1237030:intron 25.0%
! CTAAAAAATTCAACACGAAA+CGG - chr8_2:16288581-16288600 None:intergenic 25.0%
! GCATATATTCAAACATTCTA+CGG - chr8_2:16288956-16288975 None:intergenic 25.0%
! GTAACTATATTTGCATATCA+AGG + chr8_2:16289064-16289083 Msa1237030:intron 25.0%
!!! ATGATAATCGACTTTTCAAA+TGG + chr8_2:16289119-16289138 Msa1237030:intron 25.0%
! ATTTAAAAATACCTTGTCTC+CGG - chr8_2:16289295-16289314 None:intergenic 25.0%
! AAAGTAATACTTCAGATAGA+AGG - chr8_2:16289471-16289490 None:intergenic 25.0%
!! TATTACTTTAAGTTCCCAAA+AGG + chr8_2:16289482-16289501 Msa1237030:intron 25.0%
! TAATGAGATGACAATAAATG+TGG + chr8_2:16289560-16289579 Msa1237030:intron 25.0%
! TTAAAATGAAATCGAAAAGC+TGG - chr8_2:16289819-16289838 None:intergenic 25.0%
! GAATTGAACCAATTTAAACA+AGG - chr8_2:16289891-16289910 None:intergenic 25.0%
! TACGTCTCTTCTATATAAAA+GGG - chr8_2:16290095-16290114 None:intergenic 25.0%
! CTTTATCATATGAAAGCTTA+TGG - chr8_2:16290162-16290181 None:intergenic 25.0%
! CATAAGCTTTCATATGATAA+AGG + chr8_2:16290160-16290179 Msa1237030:intron 25.0%
! TCATTACAGTTTAGTCTATT+TGG - chr8_2:16290313-16290332 None:intergenic 25.0%
! AGTAGATTTATTGTATAGGA+GGG - chr8_2:16290378-16290397 None:intergenic 25.0%
! AGAGAGTAGATTTATTGTAT+AGG - chr8_2:16290382-16290401 None:intergenic 25.0%
! ATACAATAAATCTACTCTCT+AGG + chr8_2:16290382-16290401 Msa1237030:intron 25.0%
! TGAATCAGAAAACAAGAAAA+TGG + chr8_2:16290732-16290751 Msa1237030:intron 25.0%
! GCATATTAGCATTTCTTATT+TGG + chr8_2:16291060-16291079 Msa1237030:intron 25.0%
!!! TGATATTTTTTGAAGGATCT+TGG + chr8_2:16291300-16291319 Msa1237030:intron 25.0%
!!! GATATTTTTTGAAGGATCTT+GGG + chr8_2:16291301-16291320 Msa1237030:intron 25.0%
!!! ATATTTTTTGAAGGATCTTG+GGG + chr8_2:16291302-16291321 Msa1237030:intron 25.0%
!!! TAACTGTTTTTAAGCATTGT+TGG - chr8_2:16291360-16291379 None:intergenic 25.0%
! CGCATGTATATATTATAATG+AGG + chr8_2:16291519-16291538 Msa1237030:intron 25.0%
! GTCTGTTGAAAGTTATTTAA+TGG + chr8_2:16291552-16291571 Msa1237030:intron 25.0%
! CTATTCATATACCTCTTAAA+TGG - chr8_2:16292127-16292146 None:intergenic 25.0%
!! CATTTAAGAGGTATATGAAT+AGG + chr8_2:16292125-16292144 Msa1237030:three_prime_UTR 25.0%
CAATATATCAGAGCCATTAA+TGG - chr8_2:16287260-16287279 None:intergenic 30.0%
CAGTGAATTAGTTGCAAAAA+TGG + chr8_2:16287351-16287370 Msa1237030:five_prime_UTR 30.0%
TTAGTTGCAAAAATGGAGAT+TGG + chr8_2:16287358-16287377 Msa1237030:five_prime_UTR 30.0%
!!! GAGATTGGATTTTTAGGTTT+GGG + chr8_2:16287373-16287392 Msa1237030:five_prime_UTR 30.0%
!!! AGATTGGATTTTTAGGTTTG+GGG + chr8_2:16287374-16287393 Msa1237030:five_prime_UTR 30.0%
!!! ATTTTTAGGTTTGGGGATAA+TGG + chr8_2:16287381-16287400 Msa1237030:five_prime_UTR 30.0%
!!! TTTTTAGGTTTGGGGATAAT+GGG + chr8_2:16287382-16287401 Msa1237030:five_prime_UTR 30.0%
ATGAAAAAAAACCATTGGAG+AGG - chr8_2:16287580-16287599 None:intergenic 30.0%
ATAAGAAATAAAAGGTGGTG+GGG - chr8_2:16287614-16287633 None:intergenic 30.0%
GAATAAGAAATAAAAGGTGG+TGG - chr8_2:16287616-16287635 None:intergenic 30.0%
!! TTTTTGTTTGCCATGTGAAA+TGG + chr8_2:16287890-16287909 Msa1237030:intron 30.0%
! GTTTTATAGAACTCTACTTG+TGG + chr8_2:16288329-16288348 Msa1237030:intron 30.0%
AACAAATAGTTGTCACATCA+AGG - chr8_2:16288542-16288561 None:intergenic 30.0%
!!! CGTTTCGTGTTGAATTTTTT+AGG + chr8_2:16288579-16288598 Msa1237030:intron 30.0%
!!! TTCGTGTTGAATTTTTTAGG+TGG + chr8_2:16288582-16288601 Msa1237030:intron 30.0%
!!! TTTTTAGGTGGTGTTTGATA+AGG + chr8_2:16288594-16288613 Msa1237030:intron 30.0%
CTTGAGCAAATTAATGGAAA+AGG + chr8_2:16288625-16288644 Msa1237030:CDS 30.0%
! CTGCAATCAATCACATATTT+TGG - chr8_2:16288755-16288774 None:intergenic 30.0%
! ATAGTACTGGAGATTATGTT+TGG + chr8_2:16288841-16288860 Msa1237030:intron 30.0%
ACTTAGTCAAAGAAATGTAG+TGG - chr8_2:16289014-16289033 None:intergenic 30.0%
!! ATCGACTTTTCAAATGGAAT+TGG + chr8_2:16289125-16289144 Msa1237030:intron 30.0%
! ATTCCAGTGTATTTCCTTTT+GGG - chr8_2:16289499-16289518 None:intergenic 30.0%
! TAATGCAATCTAAAATGGAC+TGG - chr8_2:16289677-16289696 None:intergenic 30.0%
! AATGCCAACCTTGTTTAAAT+TGG + chr8_2:16289880-16289899 Msa1237030:intron 30.0%
TGAACCAATTTAAACAAGGT+TGG - chr8_2:16289887-16289906 None:intergenic 30.0%
AAACTAAGTTGCTACAGTAA+CGG - chr8_2:16289919-16289938 None:intergenic 30.0%
GCCTTGTAATTGTATTTATG+CGG + chr8_2:16290034-16290053 Msa1237030:intron 30.0%
ACCGCATAAATACAATTACA+AGG - chr8_2:16290038-16290057 None:intergenic 30.0%
TGTATTTATGCGGTTATAGT+AGG + chr8_2:16290044-16290063 Msa1237030:intron 30.0%
CTCTTCTATATAAAAGGGAA+CGG - chr8_2:16290090-16290109 None:intergenic 30.0%
CTACGTCTCTTCTATATAAA+AGG - chr8_2:16290096-16290115 None:intergenic 30.0%
ACAAATCATGTACAGTAATC+AGG - chr8_2:16290355-16290374 None:intergenic 30.0%
GAGTAGATTTATTGTATAGG+AGG - chr8_2:16290379-16290398 None:intergenic 30.0%
GGAAAGAAATCTTTCTTTCT+GGG + chr8_2:16290567-16290586 Msa1237030:CDS 30.0%
!! AATGAAACTTGTTGTCAACA+TGG + chr8_2:16290611-16290630 Msa1237030:CDS 30.0%
TTATGAACAGAAGGAGAAAA+CGG - chr8_2:16290660-16290679 None:intergenic 30.0%
TTCTCCTTCTGTTCATAATT+TGG + chr8_2:16290662-16290681 Msa1237030:intron 30.0%
ACTTCCAAATTATGAACAGA+AGG - chr8_2:16290669-16290688 None:intergenic 30.0%
TCTGTTCATAATTTGGAAGT+AGG + chr8_2:16290669-16290688 Msa1237030:intron 30.0%
TTCATAATTTGGAAGTAGGA+AGG + chr8_2:16290673-16290692 Msa1237030:intron 30.0%
GGAAATATGAAAACATCCTA+TGG + chr8_2:16290911-16290930 Msa1237030:intron 30.0%
TATGCAATCTGGATGAATTT+GGG - chr8_2:16291045-16291064 None:intergenic 30.0%
ATATGCAATCTGGATGAATT+TGG - chr8_2:16291046-16291065 None:intergenic 30.0%
AGAAATGCTAATATGCAATC+TGG - chr8_2:16291056-16291075 None:intergenic 30.0%
GAAAATAAAGACATGCAATC+TGG - chr8_2:16291093-16291112 None:intergenic 30.0%
TTTAAACATGCCGTTACTTA+TGG - chr8_2:16291328-16291347 None:intergenic 30.0%
AACGGCATGTTTAAATTGAA+AGG + chr8_2:16291333-16291352 Msa1237030:CDS 30.0%
TTGTAGCATTCATAGTTAGA+TGG + chr8_2:16291625-16291644 Msa1237030:intron 30.0%
! TATCTGATAGTCGCATATTT+TGG - chr8_2:16291684-16291703 None:intergenic 30.0%
TAAAGTTTGAACTCGTTTGT+AGG + chr8_2:16291754-16291773 Msa1237030:intron 30.0%
ACAGCCATTTCATATATATG+TGG - chr8_2:16291934-16291953 None:intergenic 30.0%
ATATATGAAATGGCTGTTTG+AGG + chr8_2:16291937-16291956 Msa1237030:three_prime_UTR 30.0%
! AAATTTTATTAGCTAGCGCA+TGG + chr8_2:16292033-16292052 Msa1237030:three_prime_UTR 30.0%
! TCCGGTAACATAAATGTTTT+AGG + chr8_2:16292101-16292120 Msa1237030:three_prime_UTR 30.0%
GCCTAAAACATTTATGTTAC+CGG - chr8_2:16292105-16292124 None:intergenic 30.0%
!! AATGTTTTAGGCCATTTAAG+AGG + chr8_2:16292113-16292132 Msa1237030:three_prime_UTR 30.0%
ATACCCAAATACTATTACAC+TGG + chr8_2:16292163-16292182 Msa1237030:three_prime_UTR 30.0%
ACTCCAGTGTAATAGTATTT+GGG - chr8_2:16292169-16292188 None:intergenic 30.0%
TACTCCAGTGTAATAGTATT+TGG - chr8_2:16292170-16292189 None:intergenic 30.0%
!!! GGAGATTGGATTTTTAGGTT+TGG + chr8_2:16287372-16287391 Msa1237030:five_prime_UTR 35.0%
TCGTAGAAGGTTAATTGACA+TGG - chr8_2:16287413-16287432 None:intergenic 35.0%
TCAATTAACCTTCTACGACA+TGG + chr8_2:16287415-16287434 Msa1237030:five_prime_UTR 35.0%
!! TGTTGAAGGGTGTTTAATGT+TGG - chr8_2:16287488-16287507 None:intergenic 35.0%
!! TTGAAAAAGTGGGTGTTGAA+GGG - chr8_2:16287501-16287520 None:intergenic 35.0%
!! ATTGAAAAAGTGGGTGTTGA+AGG - chr8_2:16287502-16287521 None:intergenic 35.0%
GTGTTGGGAATTGAAAAAGT+GGG - chr8_2:16287511-16287530 None:intergenic 35.0%
! AGTGTTGGGAATTGAAAAAG+TGG - chr8_2:16287512-16287531 None:intergenic 35.0%
TTAAGAGAGAGAAGATGATG+TGG - chr8_2:16287535-16287554 None:intergenic 35.0%
TTCAACTTTAACCTCTCCAA+TGG + chr8_2:16287566-16287585 Msa1237030:intron 35.0%
! TTTTTGCATGCCATGTGAAA+TGG + chr8_2:16287948-16287967 Msa1237030:intron 35.0%
! TTTTTGCATGCCATGTGAAA+TGG + chr8_2:16287948-16287967 Msa1237030:intron 35.0%
ACCTTAAGACTATGTGCAAT+GGG - chr8_2:16288206-16288225 None:intergenic 35.0%
AACCTTAAGACTATGTGCAA+TGG - chr8_2:16288207-16288226 None:intergenic 35.0%
GGTGTTCTTGAGCAAATTAA+TGG + chr8_2:16288619-16288638 Msa1237030:CDS 35.0%
GACATCTATCAAGATATCTG+AGG + chr8_2:16288678-16288697 Msa1237030:CDS 35.0%
ATATTCAAACATTCTACGGC+AGG - chr8_2:16288952-16288971 None:intergenic 35.0%
CATGTAAAATGCAAACTACC+AGG - chr8_2:16289102-16289121 None:intergenic 35.0%
TTTGATTGCCTGTAGAAAGT+AGG - chr8_2:16289190-16289209 None:intergenic 35.0%
GAATAGTGCAACTCTCTAAA+TGG - chr8_2:16289379-16289398 None:intergenic 35.0%
AAAACACACACTCGTTTGAA+AGG - chr8_2:16289441-16289460 None:intergenic 35.0%
! GATTCCAGTGTATTTCCTTT+TGG - chr8_2:16289500-16289519 None:intergenic 35.0%
GTTAGAAAAGGATGTTGAAG+AGG + chr8_2:16289742-16289761 Msa1237030:intron 35.0%
!! CTTAGTTTGTGAGAGAGAAA+TGG + chr8_2:16289931-16289950 Msa1237030:intron 35.0%
TGAGAGAGAAATGGAACAAT+TGG + chr8_2:16289940-16289959 Msa1237030:intron 35.0%
TTACAAGGCATACAATTGCA+AGG - chr8_2:16290023-16290042 None:intergenic 35.0%
TTCTATATAAAAGGGAACGG+TGG - chr8_2:16290087-16290106 None:intergenic 35.0%
GGCAAGTATAACACTTCAAA+TGG - chr8_2:16290141-16290160 None:intergenic 35.0%
TATGTGAACATTGCCGTAAT+AGG + chr8_2:16290198-16290217 Msa1237030:intron 35.0%
TTCGATTAAAGCCTAATGAG+AGG - chr8_2:16290263-16290282 None:intergenic 35.0%
! TCTCATTAGGCTTTAATCGA+AGG + chr8_2:16290262-16290281 Msa1237030:intron 35.0%
! CTCATTAGGCTTTAATCGAA+GGG + chr8_2:16290263-16290282 Msa1237030:intron 35.0%
TGAGGACAATGATAAAAGCT+GGG - chr8_2:16290424-16290443 None:intergenic 35.0%
CGGAAAGAAATCTTTCTTTC+TGG + chr8_2:16290566-16290585 Msa1237030:CDS 35.0%
!! ACTTGTTGTCAACATGGTAA+TGG + chr8_2:16290617-16290636 Msa1237030:CDS 35.0%
! CTTGTTGTCAACATGGTAAT+GGG + chr8_2:16290618-16290637 Msa1237030:CDS 35.0%
TATGAACAGAAGGAGAAAAC+GGG - chr8_2:16290659-16290678 None:intergenic 35.0%
TGACATATTGACATGTCCAT+AGG - chr8_2:16290930-16290949 None:intergenic 35.0%
TATGATGAATGCTTTCTCTG+AGG + chr8_2:16291158-16291177 Msa1237030:CDS 35.0%
ATGATGAATGCTTTCTCTGA+GGG + chr8_2:16291159-16291178 Msa1237030:CDS 35.0%
! TACAGCATTTTCATCTCCAA+GGG - chr8_2:16291436-16291455 None:intergenic 35.0%
!! AGTCACGTGACTTTTTAAAG+TGG - chr8_2:16291593-16291612 None:intergenic 35.0%
! GAAGAGTGCAAAAGTTTACA+AGG - chr8_2:16292005-16292024 None:intergenic 35.0%
TCACTTGCAGTAGATTGTAT+TGG + chr8_2:16292071-16292090 Msa1237030:three_prime_UTR 35.0%
CATTTATGTTACCGGACATA+TGG - chr8_2:16292097-16292116 None:intergenic 35.0%
TTTGGGTATAACACACACAA+GGG - chr8_2:16292152-16292171 None:intergenic 35.0%
ATTTGGGTATAACACACACA+AGG - chr8_2:16292153-16292172 None:intergenic 35.0%
! AGAAGATGATGTGGAGTGTT+GGG - chr8_2:16287526-16287545 None:intergenic 40.0%
ATTATGCTCGCCATTTCACA+TGG - chr8_2:16287903-16287922 None:intergenic 40.0%
AACACCAATTAATCTGCCAC+AGG - chr8_2:16288086-16288105 None:intergenic 40.0%
AACTGTGTTGAATGAACTGC+TGG - chr8_2:16288133-16288152 None:intergenic 40.0%
AACAAGGAAAACCACTGCAA+TGG - chr8_2:16288164-16288183 None:intergenic 40.0%
GTTTAACCTGACAGTCAACA+AGG - chr8_2:16288180-16288199 None:intergenic 40.0%
! TCCCATTGCACATAGTCTTA+AGG + chr8_2:16288202-16288221 Msa1237030:intron 40.0%
!! CTCAGTTTTGTGACATCTGA+TGG + chr8_2:16288381-16288400 Msa1237030:intron 40.0%
TAGGTGGTGTTTGATAAGGA+TGG + chr8_2:16288598-16288617 Msa1237030:intron 40.0%
GATAGATGTCTCAGCATCAA+CGG - chr8_2:16288668-16288687 None:intergenic 40.0%
TGCTGAGAAGTCTATAGTAC+TGG + chr8_2:16288828-16288847 Msa1237030:intron 40.0%
CTGGAGATTATGTTTGGATG+AGG + chr8_2:16288847-16288866 Msa1237030:intron 40.0%
AAGATCTGCCTACTTTCTAC+AGG + chr8_2:16289179-16289198 Msa1237030:intron 40.0%
CTACAGGCAATCAAAGCAAA+AGG + chr8_2:16289195-16289214 Msa1237030:intron 40.0%
CTTTCTTGAAGCTCCTGTTT+CGG + chr8_2:16289224-16289243 Msa1237030:CDS 40.0%
TTTCTTGAAGCTCCTGTTTC+GGG + chr8_2:16289225-16289244 Msa1237030:CDS 40.0%
! CAACTAGTTATACTTGCTGC+CGG + chr8_2:16289273-16289292 Msa1237030:CDS 40.0%
GTTCCCAAAAGGAAATACAC+TGG + chr8_2:16289493-16289512 Msa1237030:intron 40.0%
GAGCTTTCTGATAGCTAATC+TGG - chr8_2:16289631-16289650 None:intergenic 40.0%
AGAAAAGGATGTTGAAGAGG+AGG + chr8_2:16289745-16289764 Msa1237030:intron 40.0%
TGAACATTGCCGTAATAGGT+TGG + chr8_2:16290202-16290221 Msa1237030:intron 40.0%
GACCTATTGCCAACCTATTA+CGG - chr8_2:16290214-16290233 None:intergenic 40.0%
CTGAGGACAATGATAAAAGC+TGG - chr8_2:16290425-16290444 None:intergenic 40.0%
! TCATTTTCAACGGACAACTG+AGG - chr8_2:16290442-16290461 None:intergenic 40.0%
!! GTGGTGGATTCGTTTGATAT+AGG + chr8_2:16290506-16290525 Msa1237030:intron 40.0%
CTTCCAGCATTTGATGTACT+CGG + chr8_2:16290546-16290565 Msa1237030:CDS 40.0%
TTTCCGAGTACATCAAATGC+TGG - chr8_2:16290552-16290571 None:intergenic 40.0%
GAAATCTTTCTTTCTGGGTG+AGG + chr8_2:16290572-16290591 Msa1237030:CDS 40.0%
!! TTGTCAACATGGTAATGGGA+AGG + chr8_2:16290622-16290641 Msa1237030:CDS 40.0%
ATGAACAGAAGGAGAAAACG+GGG - chr8_2:16290658-16290677 None:intergenic 40.0%
TAGCTATCACGTAGAGCTTA+TGG + chr8_2:16290890-16290909 Msa1237030:intron 40.0%
AGACTGTTTGAGAGAGCTTA+CGG - chr8_2:16290963-16290982 None:intergenic 40.0%
GCTGGTAAGTTACTGTGATA+AGG + chr8_2:16291233-16291252 Msa1237030:intron 40.0%
GGTAAGTTACTGTGATAAGG+AGG + chr8_2:16291236-16291255 Msa1237030:intron 40.0%
ATGTTTCAGTGGAAAAGCAG+GGG - chr8_2:16291385-16291404 None:intergenic 40.0%
GATGTTTCAGTGGAAAAGCA+GGG - chr8_2:16291386-16291405 None:intergenic 40.0%
TGATGTTTCAGTGGAAAAGC+AGG - chr8_2:16291387-16291406 None:intergenic 40.0%
! GTACAGCATTTTCATCTCCA+AGG - chr8_2:16291437-16291456 None:intergenic 40.0%
ATTCAAGAAAGCCAGAAGCA+TGG + chr8_2:16291778-16291797 Msa1237030:CDS 40.0%
! TTCAAGAAAGCCAGAAGCAT+GGG + chr8_2:16291779-16291798 Msa1237030:CDS 40.0%
TGAAATGGCTGTTTGAGGAT+AGG + chr8_2:16291942-16291961 Msa1237030:three_prime_UTR 40.0%
TATTAGCTAGCGCATGGATT+CGG + chr8_2:16292039-16292058 Msa1237030:three_prime_UTR 40.0%
! GATTGTATTGGCCATATGTC+CGG + chr8_2:16292083-16292102 Msa1237030:three_prime_UTR 40.0%
AGGAAAGGGTCTTTATCGAG+AGG + chr8_2:16287294-16287313 Msa1237030:five_prime_UTR 45.0%
ATGGCTTCAAGGTCACTGTT+TGG + chr8_2:16287434-16287453 Msa1237030:five_prime_UTR 45.0%
CAGAACCCTCTCTCTTACAA+TGG + chr8_2:16287459-16287478 Msa1237030:intron 45.0%
GGTGACCATTGTAAGAGAGA+GGG - chr8_2:16287467-16287486 None:intergenic 45.0%
TGGTGACCATTGTAAGAGAG+AGG - chr8_2:16287468-16287487 None:intergenic 45.0%
GAGAAGATGATGTGGAGTGT+TGG - chr8_2:16287527-16287546 None:intergenic 45.0%
GCATCCTGTGGCAGATTAAT+TGG + chr8_2:16288079-16288098 Msa1237030:intron 45.0%
TGGACGAGAGAGAGGATTAA+CGG - chr8_2:16288113-16288132 None:intergenic 45.0%
GTTTCAACATGCCATTGCAG+TGG + chr8_2:16288150-16288169 Msa1237030:intron 45.0%
!! GGTTTTCCTTGTTGACTGTC+AGG + chr8_2:16288171-16288190 Msa1237030:intron 45.0%
! ATGGTAGTGTGATGAACTCG+TGG + chr8_2:16288400-16288419 Msa1237030:intron 45.0%
TGTGATGAACTCGTGGAACA+TGG + chr8_2:16288407-16288426 Msa1237030:five_prime_UTR 45.0%
CATTTCTTGACAACAGCTGC+AGG - chr8_2:16288452-16288471 None:intergenic 45.0%
TCAAGGCTGTAAGCATAACC+TGG + chr8_2:16289081-16289100 Msa1237030:intron 45.0%
CAGGCAATCAAAGCAAAAGG+TGG + chr8_2:16289198-16289217 Msa1237030:intron 45.0%
AGTAAGAAGCCTGCAGAAGA+TGG + chr8_2:16289249-16289268 Msa1237030:CDS 45.0%
CGGCAGCAAGTATAACTAGT+TGG - chr8_2:16289275-16289294 None:intergenic 45.0%
! AAAAGTGCAGCATAGCAGGA+TGG - chr8_2:16289354-16289373 None:intergenic 45.0%
! ACACTCGTTTGAAAGGCATG+AGG - chr8_2:16289434-16289453 None:intergenic 45.0%
ATGTTGAAGAGGAGGAGTGA+GGG + chr8_2:16289753-16289772 Msa1237030:intron 45.0%
! TGCCGTAATAGGTTGGCAAT+AGG + chr8_2:16290209-16290228 Msa1237030:intron 45.0%
! TAGGTTGGCAATAGGTCCAT+TGG + chr8_2:16290217-16290236 Msa1237030:intron 45.0%
AGGTTGGCAATAGGTCCATT+GGG + chr8_2:16290218-16290237 Msa1237030:intron 45.0%
TCCATTGGGATTGCACAGAT+GGG + chr8_2:16290232-16290251 Msa1237030:intron 45.0%
GGACAATGATAAAAGCTGGG+AGG - chr8_2:16290421-16290440 None:intergenic 45.0%
TCTTTCTTTCTGGGTGAGGT+TGG + chr8_2:16290576-16290595 Msa1237030:CDS 45.0%
TTTCTGGGTGAGGTTGGAAA+TGG + chr8_2:16290582-16290601 Msa1237030:CDS 45.0%
GACTGTTTGAGAGAGCTTAC+GGG - chr8_2:16290962-16290981 None:intergenic 45.0%
! CTGACACTTGCTGAAAGAAG+TGG + chr8_2:16291183-16291202 Msa1237030:CDS 45.0%
! GCACATCAAGAAGTGTGCTA+GGG - chr8_2:16291215-16291234 None:intergenic 45.0%
! AGCACATCAAGAAGTGTGCT+AGG - chr8_2:16291216-16291235 None:intergenic 45.0%
TAGCACACTTCTTGATGTGC+TGG + chr8_2:16291215-16291234 Msa1237030:CDS 45.0%
GATCTTGGGGCCATAAGTAA+CGG + chr8_2:16291315-16291334 Msa1237030:CDS 45.0%
TCCACTGAAACATCAGCAGA+AGG + chr8_2:16291392-16291411 Msa1237030:CDS 45.0%
TCCTTCTGCTGATGTTTCAG+TGG - chr8_2:16291396-16291415 None:intergenic 45.0%
! TCAAGAAAGCCAGAAGCATG+GGG + chr8_2:16291780-16291799 Msa1237030:CDS 45.0%
CGTGCACAGCTGAAAAATCA+AGG - chr8_2:16291814-16291833 None:intergenic 45.0%
!! TTTAAAAAAAAAAAACAAAT+AGG - chr8_2:16287981-16288000 None:intergenic 5.0%
CCTTGAAGCCATGTCGTAGA+AGG - chr8_2:16287426-16287445 None:intergenic 50.0%
CCTTCTACGACATGGCTTCA+AGG + chr8_2:16287423-16287442 Msa1237030:five_prime_UTR 50.0%
AGGATGCTCGCCATTTCACA+TGG - chr8_2:16287961-16287980 None:intergenic 50.0%
AGGATGCTCGCCATTTCACA+TGG - chr8_2:16287961-16287980 None:intergenic 50.0%
!! GTGGAACATGGTGCTACAGT+TGG + chr8_2:16288419-16288438 Msa1237030:five_prime_UTR 50.0%
ATCTGATCCTGCAGCTGCTT+TGG + chr8_2:16288493-16288512 Msa1237030:CDS 50.0%
GGCTTCTTACTACCCGAAAC+AGG - chr8_2:16289240-16289259 None:intergenic 50.0%
ACTAGTTGGCCATCTTCTGC+AGG - chr8_2:16289261-16289280 None:intergenic 50.0%
! TATACTTGCTGCCGGAGACA+AGG + chr8_2:16289281-16289300 Msa1237030:CDS 50.0%
! GGCTAAAAGTGCAGCATAGC+AGG - chr8_2:16289358-16289377 None:intergenic 50.0%
GATGTTGAAGAGGAGGAGTG+AGG + chr8_2:16289752-16289771 Msa1237030:intron 50.0%
GTCCATTGGGATTGCACAGA+TGG + chr8_2:16290231-16290250 Msa1237030:intron 50.0%
CCATTGGGATTGCACAGATG+GGG + chr8_2:16290233-16290252 Msa1237030:intron 50.0%
CATTGGGATTGCACAGATGG+GGG + chr8_2:16290234-16290253 Msa1237030:intron 50.0%
TCAGCAGAAGGACATGAGAC+TGG + chr8_2:16291404-16291423 Msa1237030:CDS 50.0%
! AAAGCCAGAAGCATGGGGTT+GGG + chr8_2:16291785-16291804 Msa1237030:CDS 50.0%
TGAACTGCTGGACGAGAGAG+AGG - chr8_2:16288121-16288140 None:intergenic 55.0%
! TGATCCTGCAGCTGCTTTGG+CGG + chr8_2:16288496-16288515 Msa1237030:CDS 55.0%
CCCCATCTGTGCAATCCCAA+TGG - chr8_2:16290236-16290255 None:intergenic 55.0%
GATGGGGGTTGCCTCTCATT+AGG + chr8_2:16290249-16290268 Msa1237030:intron 55.0%
! GAAGGACATGAGACTGGCTC+TGG + chr8_2:16291410-16291429 Msa1237030:CDS 55.0%
! TCATTTGCTGCAGCTGCGAC+AGG - chr8_2:16291465-16291484 None:intergenic 55.0%
TGTCGCAGCTGCAGCAAATG+AGG + chr8_2:16291464-16291483 Msa1237030:CDS 55.0%
! GAAAGCCAGAAGCATGGGGT+TGG + chr8_2:16291784-16291803 Msa1237030:CDS 55.0%
ATCTGCCACAGGATGCCACG+TGG - chr8_2:16288075-16288094 None:intergenic 60.0%
!! ATGAGACTGGCTCTGGCCCT+TGG + chr8_2:16291417-16291436 Msa1237030:CDS 60.0%
CATGCGCTCTCACGCACACT+CGG - chr8_2:16291505-16291524 None:intergenic 60.0%
GTCTCCCAACCCCATGCTTC+TGG - chr8_2:16291792-16291811 None:intergenic 60.0%
TCCAATTGCACGCCGCCACG+TGG + chr8_2:16288057-16288076 Msa1237030:intron 65.0%
TGCCACAGGATGCCACGTGG+CGG - chr8_2:16288072-16288091 None:intergenic 65.0%
CTGACCGCCAAAGCAGCTGC+AGG - chr8_2:16288503-16288522 None:intergenic 65.0%
GCTGCAGCTGCGACAGGCAT+TGG - chr8_2:16291459-16291478 None:intergenic 65.0%
GCGCGCGCACTCTGTGCATT+GGG - chr8_2:16292200-16292219 None:intergenic 65.0%
GCCACGTGGCGGCGTGCAAT+TGG - chr8_2:16288061-16288080 None:intergenic 70.0%
CGCCGCCACGTGGCATCCTG+TGG + chr8_2:16288067-16288086 Msa1237030:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 16287181 16292219 16287181 ID=Msa1237030;Name=Msa1237030
chr8_2 mRNA 16287181 16292219 16287181 ID=Msa1237030-mRNA-1;Parent=Msa1237030;Name=Msa1237030-mRNA-1;_AED=0.05;_eAED=0.05;_QI=377|1|1|1|0.85|0.87|8|372|222
chr8_2 exon 16287181 16287476 16287181 ID=Msa1237030-mRNA-1:exon:6090;Parent=Msa1237030-mRNA-1
chr8_2 exon 16288407 16288517 16288407 ID=Msa1237030-mRNA-1:exon:6091;Parent=Msa1237030-mRNA-1
chr8_2 exon 16288601 16288699 16288601 ID=Msa1237030-mRNA-1:exon:6092;Parent=Msa1237030-mRNA-1
chr8_2 exon 16289201 16289302 16289201 ID=Msa1237030-mRNA-1:exon:6093;Parent=Msa1237030-mRNA-1
chr8_2 exon 16290528 16290643 16290528 ID=Msa1237030-mRNA-1:exon:6094;Parent=Msa1237030-mRNA-1
chr8_2 exon 16291158 16291236 16291158 ID=Msa1237030-mRNA-1:exon:6095;Parent=Msa1237030-mRNA-1
chr8_2 exon 16291315 16291485 16291315 ID=Msa1237030-mRNA-1:exon:6096;Parent=Msa1237030-mRNA-1
chr8_2 exon 16291776 16292219 16291776 ID=Msa1237030-mRNA-1:exon:6097;Parent=Msa1237030-mRNA-1
chr8_2 five_prime_UTR 16287181 16287476 16287181 ID=Msa1237030-mRNA-1:five_prime_utr;Parent=Msa1237030-mRNA-1
chr8_2 five_prime_UTR 16288407 16288487 16288407 ID=Msa1237030-mRNA-1:five_prime_utr;Parent=Msa1237030-mRNA-1
chr8_2 CDS 16288488 16288517 16288488 ID=Msa1237030-mRNA-1:cds;Parent=Msa1237030-mRNA-1
chr8_2 CDS 16288601 16288699 16288601 ID=Msa1237030-mRNA-1:cds;Parent=Msa1237030-mRNA-1
chr8_2 CDS 16289201 16289302 16289201 ID=Msa1237030-mRNA-1:cds;Parent=Msa1237030-mRNA-1
chr8_2 CDS 16290528 16290643 16290528 ID=Msa1237030-mRNA-1:cds;Parent=Msa1237030-mRNA-1
chr8_2 CDS 16291158 16291236 16291158 ID=Msa1237030-mRNA-1:cds;Parent=Msa1237030-mRNA-1
chr8_2 CDS 16291315 16291485 16291315 ID=Msa1237030-mRNA-1:cds;Parent=Msa1237030-mRNA-1
chr8_2 CDS 16291776 16291847 16291776 ID=Msa1237030-mRNA-1:cds;Parent=Msa1237030-mRNA-1
chr8_2 three_prime_UTR 16291848 16292219 16291848 ID=Msa1237030-mRNA-1:three_prime_utr;Parent=Msa1237030-mRNA-1
Gene Sequence

>Msa1237030

ATGTTATCTGATCCTGCAGCTGCTTTGGCGGTGGTGTTTGATAAGGATGGTGTTCTTGAGCAAATTAATGGAAAAGGTTATATTGACATGTCAACCGTTGATGCTGAGACATCTATCAAGATATCTGAGGCAATCAAAGCAAAAGGTGGTGACTTTCTTGAAGCTCCTGTTTCGGGTAGTAAGAAGCCTGCAGAAGATGGCCAACTAGTTATACTTGCTGCCGGAGACAAGGCATTCTATGATGAAGCACTTCCAGCATTTGATGTACTCGGAAAGAAATCTTTCTTTCTGGGTGAGGTTGGAAATGGAGCAAAAATGAAACTTGTTGTCAACATGGTAATGGGAAGTATGATGAATGCTTTCTCTGAGGGACTGACACTTGCTGAAAGAAGTGGCTTGAACCCTAGCACACTTCTTGATGTGCTGGATCTTGGGGCCATAAGTAACGGCATGTTTAAATTGAAAGGACCAACAATGCTTAAAAACAGTTACGCCCCTGCTTTTCCACTGAAACATCAGCAGAAGGACATGAGACTGGCTCTGGCCCTTGGAGATGAAAATGCTGTACCAATGCCTGTCGCAGCTGCAGCAAATGAGGCATTCAAGAAAGCCAGAAGCATGGGGTTGGGAGACCTTGATTTTTCAGCTGTGCACGAGACTTTGAAATAA

Protein sequence

>Msa1237030

MLSDPAAALAVVFDKDGVLEQINGKGYIDMSTVDAETSIKISEAIKAKGGDFLEAPVSGSKKPAEDGQLVILAAGDKAFYDEALPAFDVLGKKSFFLGEVGNGAKMKLVVNMVMGSMMNAFSEGLTLAERSGLNPSTLLDVLDLGAISNGMFKLKGPTMLKNSYAPAFPLKHQQKDMRLALALGDENAVPMPVAAAANEAFKKARSMGLGDLDFSAVHETLK*