Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429520 | XP_003602953.1 | 92.419 | 277 | 2 | 1 | 1 | 277 | 1 | 258 | 0.0 | 520 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429520 | sp|Q9SE96|GEML1_ARATH | 71.605 | 243 | 61 | 2 | 35 | 277 | 23 | 257 | 8.76e-122 | 351 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429520 | G7J579 | 92.419 | 277 | 2 | 1 | 1 | 277 | 1 | 258 | 0.0 | 520 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0429520 | -0.837211 | 5.940639e-57 | -8.615850e-47 |
| Msa0003470 | Msa0429520 | -0.834524 | 2.851346e-56 | -8.615850e-47 |
| Msa0008830 | Msa0429520 | -0.812045 | 5.165289e-51 | -8.615850e-47 |
| Msa0011850 | Msa0429520 | -0.813739 | 2.197632e-51 | -8.615850e-47 |
| Msa0017120 | Msa0429520 | -0.835166 | 1.965772e-56 | -8.615850e-47 |
| Msa0017940 | Msa0429520 | -0.826049 | 3.357597e-54 | -8.615850e-47 |
| Msa0018220 | Msa0429520 | -0.816107 | 6.556085e-52 | -8.615850e-47 |
| Msa0024680 | Msa0429520 | -0.869234 | 3.606580e-66 | -8.615850e-47 |
| Msa0027540 | Msa0429520 | -0.812250 | 4.659272e-51 | -8.615850e-47 |
| Msa0028060 | Msa0429520 | -0.830966 | 2.180626e-55 | -8.615850e-47 |
| Msa0029540 | Msa0429520 | 0.826085 | 3.291137e-54 | -8.615850e-47 |
| Msa0030000 | Msa0429520 | -0.817344 | 3.461505e-52 | -8.615850e-47 |
| Msa0030310 | Msa0429520 | -0.837261 | 5.770796e-57 | -8.615850e-47 |
| Msa0030730 | Msa0429520 | -0.807234 | 5.582740e-50 | -8.615850e-47 |
| Msa0032120 | Msa0429520 | -0.804764 | 1.846998e-49 | -8.615850e-47 |
| Msa0032370 | Msa0429520 | -0.830885 | 2.281957e-55 | -8.615850e-47 |
| Msa0032400 | Msa0429520 | -0.801678 | 8.038162e-49 | -8.615850e-47 |
| Msa0032840 | Msa0429520 | 0.876713 | 1.121826e-68 | -8.615850e-47 |
| Msa0043680 | Msa0429520 | -0.815211 | 1.038260e-51 | -8.615850e-47 |
| Msa0048020 | Msa0429520 | -0.855498 | 6.060810e-62 | -8.615850e-47 |
| Msa0050580 | Msa0429520 | -0.815787 | 7.730430e-52 | -8.615850e-47 |
| Msa0051230 | Msa0429520 | 0.803957 | 2.720613e-49 | -8.615850e-47 |
| Msa0051430 | Msa0429520 | 0.817815 | 2.712069e-52 | -8.615850e-47 |
| Msa0052460 | Msa0429520 | -0.824705 | 6.982403e-54 | -8.615850e-47 |
| Msa0075310 | Msa0429520 | -0.800222 | 1.594467e-48 | -8.615850e-47 |
| Msa0079250 | Msa0429520 | -0.815713 | 8.028258e-52 | -8.615850e-47 |
| Msa0082820 | Msa0429520 | -0.815883 | 7.358027e-52 | -8.615850e-47 |
| Msa0089210 | Msa0429520 | -0.802629 | 5.123976e-49 | -8.615850e-47 |
| Msa0092660 | Msa0429520 | -0.833981 | 3.902246e-56 | -8.615850e-47 |
| Msa0092730 | Msa0429520 | -0.840164 | 1.025602e-57 | -8.615850e-47 |
| Msa0094420 | Msa0429520 | -0.836357 | 9.812272e-57 | -8.615850e-47 |
| Msa0095380 | Msa0429520 | -0.806048 | 9.939521e-50 | -8.615850e-47 |
| Msa0096670 | Msa0429520 | -0.817668 | 2.926967e-52 | -8.615850e-47 |
| Msa0097050 | Msa0429520 | -0.818941 | 1.507403e-52 | -8.615850e-47 |
| Msa0098390 | Msa0429520 | 0.803554 | 3.298699e-49 | -8.615850e-47 |
| Msa0103780 | Msa0429520 | -0.803405 | 3.540789e-49 | -8.615850e-47 |
| Msa0105210 | Msa0429520 | -0.813634 | 2.317269e-51 | -8.615850e-47 |
| Msa0105420 | Msa0429520 | -0.838394 | 2.951335e-57 | -8.615850e-47 |
| Msa0113160 | Msa0429520 | -0.803956 | 2.721910e-49 | -8.615850e-47 |
| Msa0114540 | Msa0429520 | 0.873854 | 1.064620e-67 | -8.615850e-47 |
| Msa0120330 | Msa0429520 | -0.852234 | 5.276754e-61 | -8.615850e-47 |
| Msa0125230 | Msa0429520 | -0.806140 | 9.503470e-50 | -8.615850e-47 |
| Msa0135980 | Msa0429520 | -0.815376 | 9.542006e-52 | -8.615850e-47 |
| Msa0137600 | Msa0429520 | -0.835383 | 1.732894e-56 | -8.615850e-47 |
| Msa0138970 | Msa0429520 | 0.830967 | 2.179075e-55 | -8.615850e-47 |
| Msa0139900 | Msa0429520 | -0.824001 | 1.022505e-53 | -8.615850e-47 |
| Msa0141430 | Msa0429520 | -0.852175 | 5.484667e-61 | -8.615850e-47 |
| Msa0141670 | Msa0429520 | -0.801102 | 1.055009e-48 | -8.615850e-47 |
| Msa0141830 | Msa0429520 | -0.842397 | 2.652026e-58 | -8.615850e-47 |
| Msa0142470 | Msa0429520 | -0.835804 | 1.355345e-56 | -8.615850e-47 |
| Msa0143080 | Msa0429520 | -0.844062 | 9.539771e-59 | -8.615850e-47 |
| Msa0143240 | Msa0429520 | 0.821216 | 4.542162e-53 | -8.615850e-47 |
| Msa0143970 | Msa0429520 | -0.817182 | 3.764836e-52 | -8.615850e-47 |
| Msa0145950 | Msa0429520 | -0.830031 | 3.691443e-55 | -8.615850e-47 |
| Msa0146470 | Msa0429520 | -0.813616 | 2.339493e-51 | -8.615850e-47 |
| Msa0157020 | Msa0429520 | -0.820397 | 7.008727e-53 | -8.615850e-47 |
| Msa0162030 | Msa0429520 | -0.807063 | 6.068717e-50 | -8.615850e-47 |
| Msa0163550 | Msa0429520 | -0.821106 | 4.815052e-53 | -8.615850e-47 |
| Msa0167640 | Msa0429520 | 0.824298 | 8.706275e-54 | -8.615850e-47 |
| Msa0168100 | Msa0429520 | -0.821743 | 3.433142e-53 | -8.615850e-47 |
| Msa0168640 | Msa0429520 | 0.821656 | 3.595732e-53 | -8.615850e-47 |
| Msa0172350 | Msa0429520 | -0.892182 | 2.009821e-74 | -8.615850e-47 |
| Msa0172960 | Msa0429520 | 0.853026 | 3.135325e-61 | -8.615850e-47 |
| Msa0181520 | Msa0429520 | -0.829549 | 4.837640e-55 | -8.615850e-47 |
| Msa0183620 | Msa0429520 | -0.824506 | 7.779513e-54 | -8.615850e-47 |
| Msa0185390 | Msa0429520 | -0.838027 | 3.670410e-57 | -8.615850e-47 |
| Msa0185700 | Msa0429520 | -0.803059 | 4.176781e-49 | -8.615850e-47 |
| Msa0189950 | Msa0429520 | -0.835044 | 2.109671e-56 | -8.615850e-47 |
| Msa0194970 | Msa0429520 | -0.820210 | 7.736330e-53 | -8.615850e-47 |
| Msa0196130 | Msa0429520 | 0.811773 | 5.920327e-51 | -8.615850e-47 |
| Msa0200970 | Msa0429520 | -0.803518 | 3.355355e-49 | -8.615850e-47 |
| Msa0206080 | Msa0429520 | -0.809896 | 1.508487e-50 | -8.615850e-47 |
| Msa0207000 | Msa0429520 | -0.814697 | 1.349883e-51 | -8.615850e-47 |
| Msa0207180 | Msa0429520 | -0.820842 | 5.539132e-53 | -8.615850e-47 |
| Msa0213080 | Msa0429520 | -0.833816 | 4.291886e-56 | -8.615850e-47 |
| Msa0213750 | Msa0429520 | -0.814392 | 1.577473e-51 | -8.615850e-47 |
| Msa0222920 | Msa0429520 | -0.838138 | 3.435227e-57 | -8.615850e-47 |
| Msa0227500 | Msa0429520 | -0.820432 | 6.880561e-53 | -8.615850e-47 |
| Msa0227510 | Msa0429520 | -0.810588 | 1.069888e-50 | -8.615850e-47 |
| Msa0230400 | Msa0429520 | -0.803139 | 4.019636e-49 | -8.615850e-47 |
| Msa0230550 | Msa0429520 | 0.864393 | 1.255924e-64 | -8.615850e-47 |
| Msa0236980 | Msa0429520 | -0.843466 | 1.377152e-58 | -8.615850e-47 |
| Msa0367490 | Msa0429520 | -0.805273 | 1.445209e-49 | -8.615850e-47 |
| Msa0371610 | Msa0429520 | -0.829518 | 4.923155e-55 | -8.615850e-47 |
| Msa0374070 | Msa0429520 | -0.800772 | 1.232296e-48 | -8.615850e-47 |
| Msa0382290 | Msa0429520 | -0.830193 | 3.371330e-55 | -8.615850e-47 |
| Msa0382560 | Msa0429520 | -0.800299 | 1.538571e-48 | -8.615850e-47 |
| Msa0414950 | Msa0429520 | 0.858911 | 5.952442e-63 | -8.615850e-47 |
| Msa0417630 | Msa0429520 | -0.846483 | 2.111094e-59 | -8.615850e-47 |
| Msa0418480 | Msa0429520 | -0.819766 | 9.772928e-53 | -8.615850e-47 |
| Msa0420070 | Msa0429520 | -0.806883 | 6.626132e-50 | -8.615850e-47 |
| Msa0423250 | Msa0429520 | -0.804059 | 2.590928e-49 | -8.615850e-47 |
| Msa0423360 | Msa0429520 | 0.837393 | 5.338382e-57 | -8.615850e-47 |
| Msa0429520 | Msa0429530 | 0.949675 | 7.873770e-108 | -8.615850e-47 |
| Msa0429520 | Msa0432680 | -0.814322 | 1.634291e-51 | -8.615850e-47 |
| Msa0429520 | Msa0436280 | 0.922852 | 5.731271e-89 | -8.615850e-47 |
| Msa0429520 | Msa0436450 | -0.834891 | 2.305719e-56 | -8.615850e-47 |
| Msa0429520 | Msa0437710 | -0.815072 | 1.114688e-51 | -8.615850e-47 |
| Msa0429520 | Msa0441800 | -0.806392 | 8.411676e-50 | -8.615850e-47 |
| Msa0429520 | Msa0459770 | 0.805159 | 1.526808e-49 | -8.615850e-47 |
| Msa0429520 | Msa0465860 | -0.823596 | 1.272045e-53 | -8.615850e-47 |
| Msa0429520 | Msa0467920 | 0.808874 | 2.499683e-50 | -8.615850e-47 |
| Msa0429520 | Msa0468610 | -0.807173 | 5.751435e-50 | -8.615850e-47 |
| Msa0429520 | Msa0469910 | 0.847072 | 1.457505e-59 | -8.615850e-47 |
| Msa0429520 | Msa0476320 | -0.825769 | 3.912266e-54 | -8.615850e-47 |
| Msa0429520 | Msa0480320 | -0.811869 | 5.642776e-51 | -8.615850e-47 |
| Msa0429520 | Msa0482580 | -0.815867 | 7.418745e-52 | -8.615850e-47 |
| Msa0429520 | Msa0490300 | -0.842495 | 2.496953e-58 | -8.615850e-47 |
| Msa0429520 | Msa0500930 | 0.800161 | 1.641231e-48 | -8.615850e-47 |
| Msa0429520 | Msa0509970 | -0.821685 | 3.541320e-53 | -8.615850e-47 |
| Msa0429520 | Msa0510230 | -0.831820 | 1.344270e-55 | -8.615850e-47 |
| Msa0429520 | Msa0514490 | -0.805865 | 1.086062e-49 | -8.615850e-47 |
| Msa0429520 | Msa0519200 | -0.802795 | 4.735908e-49 | -8.615850e-47 |
| Msa0429520 | Msa0520320 | -0.828111 | 1.078230e-54 | -8.615850e-47 |
| Msa0429520 | Msa0521310 | -0.841810 | 3.791821e-58 | -8.615850e-47 |
| Msa0429520 | Msa0524090 | -0.805294 | 1.430758e-49 | -8.615850e-47 |
| Msa0429520 | Msa0524120 | -0.825322 | 4.993006e-54 | -8.615850e-47 |
| Msa0429520 | Msa0526130 | -0.837365 | 5.425188e-57 | -8.615850e-47 |
| Msa0429520 | Msa0526640 | 0.810597 | 1.065240e-50 | -8.615850e-47 |
| Msa0429520 | Msa0526700 | -0.870499 | 1.393646e-66 | -8.615850e-47 |
| Msa0429520 | Msa0526710 | -0.887352 | 1.539288e-72 | -8.615850e-47 |
| Msa0429520 | Msa0527590 | -0.835100 | 2.042353e-56 | -8.615850e-47 |
| Msa0429520 | Msa0527600 | -0.830340 | 3.103258e-55 | -8.615850e-47 |
| Msa0429520 | Msa0532840 | -0.820796 | 5.675951e-53 | -8.615850e-47 |
| Msa0429520 | Msa0533010 | -0.825961 | 3.523571e-54 | -8.615850e-47 |
| Msa0429520 | Msa0535030 | -0.811785 | 5.884470e-51 | -8.615850e-47 |
| Msa0429520 | Msa0535060 | -0.813185 | 2.909482e-51 | -8.615850e-47 |
| Msa0429520 | Msa0538570 | -0.814992 | 1.161609e-51 | -8.615850e-47 |
| Msa0429520 | Msa0546380 | -0.865524 | 5.547568e-65 | -8.615850e-47 |
| Msa0429520 | Msa0546740 | -0.833624 | 4.792959e-56 | -8.615850e-47 |
| Msa0429520 | Msa0569020 | -0.827535 | 1.482719e-54 | -8.615850e-47 |
| Msa0429520 | Msa0575250 | -0.803951 | 2.727962e-49 | -8.615850e-47 |
| Msa0429520 | Msa0575990 | 0.849762 | 2.626045e-60 | -8.615850e-47 |
| Msa0429520 | Msa0576100 | 0.848298 | 6.698897e-60 | -8.615850e-47 |
| Msa0429520 | Msa0576420 | -0.808275 | 3.354429e-50 | -8.615850e-47 |
| Msa0429520 | Msa0576980 | -0.801736 | 7.821120e-49 | -8.615850e-47 |
| Msa0429520 | Msa0578900 | -0.811827 | 5.762148e-51 | -8.615850e-47 |
| Msa0429520 | Msa0581340 | -0.823213 | 1.563362e-53 | -8.615850e-47 |
| Msa0429520 | Msa0581460 | -0.827196 | 1.787730e-54 | -8.615850e-47 |
| Msa0429520 | Msa0583930 | -0.814340 | 1.619693e-51 | -8.615850e-47 |
| Msa0429520 | Msa0591770 | -0.831528 | 1.585921e-55 | -8.615850e-47 |
| Msa0429520 | Msa0594390 | -0.808079 | 3.694447e-50 | -8.615850e-47 |
| Msa0429520 | Msa0607480 | -0.834025 | 3.804334e-56 | -8.615850e-47 |
| Msa0429520 | Msa0610860 | -0.813127 | 2.995028e-51 | -8.615850e-47 |
| Msa0429520 | Msa0619330 | -0.820913 | 5.335502e-53 | -8.615850e-47 |
| Msa0429520 | Msa0621890 | -0.802076 | 6.659045e-49 | -8.615850e-47 |
| Msa0429520 | Msa0634270 | -0.807140 | 5.846686e-50 | -8.615850e-47 |
| Msa0429520 | Msa0642650 | -0.882345 | 1.126487e-70 | -8.615850e-47 |
| Msa0429520 | Msa0647750 | -0.801338 | 9.437427e-49 | -8.615850e-47 |
| Msa0429520 | Msa0651520 | 0.819103 | 1.384517e-52 | -8.615850e-47 |
| Msa0429520 | Msa0669850 | -0.834142 | 3.556121e-56 | -8.615850e-47 |
| Msa0429520 | Msa0678890 | -0.826958 | 2.038513e-54 | -8.615850e-47 |
| Msa0429520 | Msa0681890 | -0.873405 | 1.508444e-67 | -8.615850e-47 |
| Msa0429520 | Msa0682400 | -0.821811 | 3.311252e-53 | -8.615850e-47 |
| Msa0429520 | Msa0693570 | -0.809548 | 1.792017e-50 | -8.615850e-47 |
| Msa0429520 | Msa0703720 | -0.837145 | 6.177327e-57 | -8.615850e-47 |
| Msa0429520 | Msa0703760 | -0.841903 | 3.583686e-58 | -8.615850e-47 |
| Msa0429520 | Msa0705430 | -0.811748 | 5.996098e-51 | -8.615850e-47 |
| Msa0429520 | Msa0706580 | -0.807373 | 5.218724e-50 | -8.615850e-47 |
| Msa0429520 | Msa0707780 | -0.816007 | 6.904486e-52 | -8.615850e-47 |
| Msa0429520 | Msa0708080 | -0.801950 | 7.068083e-49 | -8.615850e-47 |
| Msa0429520 | Msa0709480 | -0.833230 | 6.008238e-56 | -8.615850e-47 |
| Msa0429520 | Msa0722940 | -0.807420 | 5.100419e-50 | -8.615850e-47 |
| Msa0429520 | Msa0725920 | -0.823293 | 1.497366e-53 | -8.615850e-47 |
| Msa0429520 | Msa0730180 | -0.858261 | 9.302231e-63 | -8.615850e-47 |
| Msa0429520 | Msa0733000 | -0.800518 | 1.388311e-48 | -8.615850e-47 |
| Msa0429520 | Msa0735470 | -0.847753 | 9.472333e-60 | -8.615850e-47 |
| Msa0429520 | Msa0740420 | -0.839820 | 1.260395e-57 | -8.615850e-47 |
| Msa0429520 | Msa0743680 | -0.839317 | 1.703378e-57 | -8.615850e-47 |
| Msa0429520 | Msa0754720 | 0.836990 | 6.768550e-57 | -8.615850e-47 |
| Msa0429520 | Msa0756630 | 0.805836 | 1.101393e-49 | -8.615850e-47 |
| Msa0429520 | Msa0761580 | -0.818271 | 2.139038e-52 | -8.615850e-47 |
| Msa0429520 | Msa0766470 | -0.806144 | 9.485115e-50 | -8.615850e-47 |
| Msa0429520 | Msa0770430 | -0.853322 | 2.580041e-61 | -8.615850e-47 |
| Msa0429520 | Msa0782330 | -0.800598 | 1.336676e-48 | -8.615850e-47 |
| Msa0429520 | Msa0784620 | -0.839904 | 1.198772e-57 | -8.615850e-47 |
| Msa0429520 | Msa0790830 | -0.814914 | 1.208606e-51 | -8.615850e-47 |
| Msa0429520 | Msa0802500 | -0.805544 | 1.268344e-49 | -8.615850e-47 |
| Msa0429520 | Msa0820670 | -0.830573 | 2.721483e-55 | -8.615850e-47 |
| Msa0429520 | Msa0824730 | -0.824847 | 6.464439e-54 | -8.615850e-47 |
| Msa0429520 | Msa0840850 | 0.817273 | 3.592110e-52 | -8.615850e-47 |
| Msa0429520 | Msa0842230 | -0.800886 | 1.167664e-48 | -8.615850e-47 |
| Msa0429520 | Msa0844530 | -0.858573 | 7.508141e-63 | -8.615850e-47 |
| Msa0429520 | Msa0845750 | -0.800983 | 1.115568e-48 | -8.615850e-47 |
| Msa0429520 | Msa0846030 | -0.810995 | 8.733259e-51 | -8.615850e-47 |
| Msa0429520 | Msa0852730 | -0.811280 | 7.574410e-51 | -8.615850e-47 |
| Msa0429520 | Msa0854570 | -0.816206 | 6.233347e-52 | -8.615850e-47 |
| Msa0429520 | Msa0855020 | -0.839531 | 1.498490e-57 | -8.615850e-47 |
| Msa0429520 | Msa0863800 | -0.838189 | 3.333668e-57 | -8.615850e-47 |
| Msa0429520 | Msa0874760 | -0.803583 | 3.253487e-49 | -8.615850e-47 |
| Msa0429520 | Msa0875630 | -0.804357 | 2.245687e-49 | -8.615850e-47 |
| Msa0429520 | Msa0881480 | -0.839242 | 1.781139e-57 | -8.615850e-47 |
| Msa0429520 | Msa0890250 | -0.851809 | 6.966080e-61 | -8.615850e-47 |
| Msa0429520 | Msa0896210 | -0.820189 | 7.824200e-53 | -8.615850e-47 |
| Msa0429520 | Msa0896220 | -0.804080 | 2.564959e-49 | -8.615850e-47 |
| Msa0429520 | Msa0903330 | -0.835979 | 1.224149e-56 | -8.615850e-47 |
| Msa0429520 | Msa0907700 | -0.844375 | 7.860364e-59 | -8.615850e-47 |
| Msa0429520 | Msa0910400 | -0.805568 | 1.253687e-49 | -8.615850e-47 |
| Msa0429520 | Msa0922540 | -0.854766 | 9.892915e-62 | -8.615850e-47 |
| Msa0429520 | Msa0925160 | -0.862811 | 3.891270e-64 | -8.615850e-47 |
| Msa0429520 | Msa0930330 | -0.825740 | 3.974850e-54 | -8.615850e-47 |
| Msa0429520 | Msa0931480 | -0.812589 | 3.929178e-51 | -8.615850e-47 |
| Msa0429520 | Msa0931610 | -0.803317 | 3.692586e-49 | -8.615850e-47 |
| Msa0429520 | Msa0935730 | -0.816008 | 6.899092e-52 | -8.615850e-47 |
| Msa0429520 | Msa0937940 | -0.812417 | 4.284873e-51 | -8.615850e-47 |
| Msa0429520 | Msa0938430 | -0.809162 | 2.168701e-50 | -8.615850e-47 |
| Msa0429520 | Msa0947530 | 0.804803 | 1.812642e-49 | -8.615850e-47 |
| Msa0429520 | Msa0955260 | -0.860985 | 1.409192e-63 | -8.615850e-47 |
| Msa0429520 | Msa0955300 | -0.802455 | 5.563867e-49 | -8.615850e-47 |
| Msa0429520 | Msa0955310 | -0.808836 | 2.546633e-50 | -8.615850e-47 |
| Msa0429520 | Msa0958020 | -0.838401 | 2.939096e-57 | -8.615850e-47 |
| Msa0429520 | Msa0972730 | -0.833249 | 5.943496e-56 | -8.615850e-47 |
| Msa0429520 | Msa0977320 | -0.817222 | 3.688471e-52 | -8.615850e-47 |
| Msa0429520 | Msa0981820 | 0.803921 | 2.766917e-49 | -8.615850e-47 |
| Msa0429520 | Msa0990520 | -0.860581 | 1.868931e-63 | -8.615850e-47 |
| Msa0429520 | Msa0996080 | -0.835834 | 1.332508e-56 | -8.615850e-47 |
| Msa0429520 | Msa0996090 | -0.817284 | 3.571077e-52 | -8.615850e-47 |
| Msa0429520 | Msa1000470 | -0.834228 | 3.384316e-56 | -8.615850e-47 |
| Msa0429520 | Msa1002040 | -0.817817 | 2.708974e-52 | -8.615850e-47 |
| Msa0429520 | Msa1004500 | -0.813331 | 2.701862e-51 | -8.615850e-47 |
| Msa0429520 | Msa1004900 | 0.827330 | 1.660814e-54 | -8.615850e-47 |
| Msa0429520 | Msa1009860 | -0.809953 | 1.466293e-50 | -8.615850e-47 |
| Msa0429520 | Msa1014270 | -0.835192 | 1.936564e-56 | -8.615850e-47 |
| Msa0429520 | Msa1015060 | -0.826704 | 2.344401e-54 | -8.615850e-47 |
| Msa0429520 | Msa1020710 | -0.814848 | 1.249940e-51 | -8.615850e-47 |
| Msa0429520 | Msa1022310 | -0.848986 | 4.319529e-60 | -8.615850e-47 |
| Msa0429520 | Msa1024140 | -0.801073 | 1.069225e-48 | -8.615850e-47 |
| Msa0429520 | Msa1027150 | -0.845067 | 5.116217e-59 | -8.615850e-47 |
| Msa0429520 | Msa1027790 | -0.837878 | 4.008898e-57 | -8.615850e-47 |
| Msa0429520 | Msa1029320 | -0.807686 | 4.476830e-50 | -8.615850e-47 |
| Msa0429520 | Msa1030280 | -0.819212 | 1.307766e-52 | -8.615850e-47 |
| Msa0429520 | Msa1040120 | -0.819893 | 9.144860e-53 | -8.615850e-47 |
| Msa0429520 | Msa1044040 | -0.800914 | 1.152241e-48 | -8.615850e-47 |
| Msa0429520 | Msa1044340 | -0.845069 | 5.111019e-59 | -8.615850e-47 |
| Msa0429520 | Msa1046870 | -0.815407 | 9.394203e-52 | -8.615850e-47 |
| Msa0429520 | Msa1055260 | -0.821250 | 4.462034e-53 | -8.615850e-47 |
| Msa0429520 | Msa1055280 | -0.814602 | 1.416785e-51 | -8.615850e-47 |
| Msa0429520 | Msa1061180 | -0.863016 | 3.363620e-64 | -8.615850e-47 |
| Msa0429520 | Msa1069660 | 0.824263 | 8.874027e-54 | -8.615850e-47 |
| Msa0429520 | Msa1072080 | -0.826419 | 2.741011e-54 | -8.615850e-47 |
| Msa0429520 | Msa1084490 | -0.812316 | 4.508395e-51 | -8.615850e-47 |
| Msa0429520 | Msa1092820 | -0.809865 | 1.531923e-50 | -8.615850e-47 |
| Msa0429520 | Msa1097380 | -0.802531 | 5.368690e-49 | -8.615850e-47 |
| Msa0429520 | Msa1097850 | -0.802424 | 5.648075e-49 | -8.615850e-47 |
| Msa0429520 | Msa1103670 | -0.807237 | 5.576164e-50 | -8.615850e-47 |
| Msa0429520 | Msa1105290 | -0.810965 | 8.866295e-51 | -8.615850e-47 |
| Msa0429520 | Msa1106560 | -0.864323 | 1.320908e-64 | -8.615850e-47 |
| Msa0429520 | Msa1106580 | -0.801863 | 7.365480e-49 | -8.615850e-47 |
| Msa0429520 | Msa1109570 | -0.803950 | 2.728825e-49 | -8.615850e-47 |
| Msa0429520 | Msa1112610 | -0.852673 | 3.956005e-61 | -8.615850e-47 |
| Msa0429520 | Msa1124680 | 0.807109 | 5.934403e-50 | -8.615850e-47 |
| Msa0429520 | Msa1125780 | -0.829517 | 4.923913e-55 | -8.615850e-47 |
| Msa0429520 | Msa1125950 | -0.827723 | 1.336685e-54 | -8.615850e-47 |
| Msa0429520 | Msa1143620 | -0.838764 | 2.369153e-57 | -8.615850e-47 |
| Msa0429520 | Msa1149760 | -0.873057 | 1.974573e-67 | -8.615850e-47 |
| Msa0429520 | Msa1154670 | -0.849439 | 3.231489e-60 | -8.615850e-47 |
| Msa0429520 | Msa1159100 | -0.846510 | 2.075586e-59 | -8.615850e-47 |
| Msa0429520 | Msa1166180 | -0.806780 | 6.964680e-50 | -8.615850e-47 |
| Msa0429520 | Msa1171340 | -0.834170 | 3.499407e-56 | -8.615850e-47 |
| Msa0429520 | Msa1175750 | -0.825668 | 4.135529e-54 | -8.615850e-47 |
| Msa0429520 | Msa1183390 | -0.854980 | 8.574563e-62 | -8.615850e-47 |
| Msa0429520 | Msa1183610 | -0.820069 | 8.333703e-53 | -8.615850e-47 |
| Msa0429520 | Msa1184580 | -0.811787 | 5.877560e-51 | -8.615850e-47 |
| Msa0429520 | Msa1190910 | -0.839162 | 1.868980e-57 | -8.615850e-47 |
| Msa0429520 | Msa1193950 | 0.814975 | 1.171705e-51 | -8.615850e-47 |
| Msa0429520 | Msa1197110 | -0.805376 | 1.375481e-49 | -8.615850e-47 |
| Msa0429520 | Msa1200920 | -0.852647 | 4.023398e-61 | -8.615850e-47 |
| Msa0429520 | Msa1214900 | -0.804428 | 2.170807e-49 | -8.615850e-47 |
| Msa0429520 | Msa1220450 | 0.830297 | 3.179273e-55 | -8.615850e-47 |
| Msa0429520 | Msa1220460 | 0.823546 | 1.306629e-53 | -8.615850e-47 |
| Msa0429520 | Msa1220480 | 0.824205 | 9.156581e-54 | -8.615850e-47 |
| Msa0429520 | Msa1221260 | -0.823665 | 1.225388e-53 | -8.615850e-47 |
| Msa0429520 | Msa1221900 | -0.805297 | 1.429021e-49 | -8.615850e-47 |
| Msa0429520 | Msa1222390 | -0.811918 | 5.505693e-51 | -8.615850e-47 |
| Msa0429520 | Msa1223840 | -0.833671 | 4.664912e-56 | -8.615850e-47 |
| Msa0429520 | Msa1224670 | -0.842476 | 2.526913e-58 | -8.615850e-47 |
| Msa0429520 | Msa1229050 | -0.831668 | 1.465207e-55 | -8.615850e-47 |
| Msa0429520 | Msa1232860 | -0.800870 | 1.176369e-48 | -8.615850e-47 |
| Msa0429520 | Msa1235890 | -0.820484 | 6.695644e-53 | -8.615850e-47 |
| Msa0429520 | Msa1237030 | -0.847995 | 8.126735e-60 | -8.615850e-47 |
| Msa0429520 | Msa1246530 | 0.834978 | 2.191735e-56 | -8.615850e-47 |
| Msa0429520 | Msa1250670 | -0.831496 | 1.615688e-55 | -8.615850e-47 |
| Msa0429520 | Msa1251290 | -0.812706 | 3.703680e-51 | -8.615850e-47 |
| Msa0429520 | Msa1254770 | -0.804813 | 1.804197e-49 | -8.615850e-47 |
| Msa0429520 | Msa1254800 | -0.801721 | 7.879577e-49 | -8.615850e-47 |
| Msa0429520 | Msa1263030 | -0.815626 | 8.394167e-52 | -8.615850e-47 |
| Msa0429520 | Msa1265070 | -0.805195 | 1.501075e-49 | -8.615850e-47 |
| Msa0429520 | Msa1265960 | -0.800240 | 1.581536e-48 | -8.615850e-47 |
| Msa0429520 | Msa1269580 | 0.924416 | 7.252759e-90 | -8.615850e-47 |
| Msa0429520 | Msa1271490 | -0.831920 | 1.269843e-55 | -8.615850e-47 |
| Msa0429520 | Msa1271510 | -0.858500 | 7.894531e-63 | -8.615850e-47 |
| Msa0429520 | Msa1271600 | -0.817029 | 4.076439e-52 | -8.615850e-47 |
| Msa0429520 | Msa1284030 | -0.805921 | 1.056724e-49 | -8.615850e-47 |
| Msa0429520 | Msa1284520 | -0.814551 | 1.454530e-51 | -8.615850e-47 |
| Msa0429520 | Msa1302150 | -0.847090 | 1.440873e-59 | -8.615850e-47 |
| Msa0429520 | Msa1307370 | -0.812598 | 3.911151e-51 | -8.615850e-47 |
| Msa0429520 | Msa1309100 | -0.801662 | 8.101527e-49 | -8.615850e-47 |
| Msa0429520 | Msa1309240 | -0.806312 | 8.743978e-50 | -8.615850e-47 |
| Msa0429520 | Msa1309360 | -0.841895 | 3.599766e-58 | -8.615850e-47 |
| Msa0429520 | Msa1315980 | -0.813172 | 2.928761e-51 | -8.615850e-47 |
| Msa0429520 | Msa1323060 | -0.821666 | 3.576209e-53 | -8.615850e-47 |
| Msa0429520 | Msa1325980 | -0.815284 | 1.000262e-51 | -8.615850e-47 |
| Msa0429520 | Msa1326000 | -0.806874 | 6.654292e-50 | -8.615850e-47 |
| Msa0429520 | Msa1337090 | -0.829656 | 4.554987e-55 | -8.615850e-47 |
| Msa0429520 | Msa1337730 | -0.819730 | 9.961106e-53 | -8.615850e-47 |
| Msa0429520 | Msa1351040 | 0.850155 | 2.038749e-60 | -8.615850e-47 |
| Msa0429520 | Msa1354040 | -0.818753 | 1.662898e-52 | -8.615850e-47 |
| Msa0429520 | Msa1360890 | 0.813487 | 2.496839e-51 | -8.615850e-47 |
| Msa0429520 | Msa1362510 | -0.819429 | 1.167040e-52 | -8.615850e-47 |
| Msa0429520 | Msa1364470 | 0.812759 | 3.606622e-51 | -8.615850e-47 |
| Msa0429520 | Msa1365870 | -0.822851 | 1.898621e-53 | -8.615850e-47 |
| Msa0429520 | Msa1367810 | -0.801133 | 1.039372e-48 | -8.615850e-47 |
| Msa0429520 | Msa1367940 | -0.816056 | 6.732591e-52 | -8.615850e-47 |
| Msa0429520 | Msa1368730 | -0.827337 | 1.654344e-54 | -8.615850e-47 |
| Msa0429520 | Msa1373510 | -0.881744 | 1.860380e-70 | -8.615850e-47 |
| Msa0429520 | Msa1374810 | -0.815856 | 7.458802e-52 | -8.615850e-47 |
| Msa0429520 | Msa1375940 | -0.809091 | 2.245248e-50 | -8.615850e-47 |
| Msa0429520 | Msa1376530 | -0.802462 | 5.547266e-49 | -8.615850e-47 |
| Msa0429520 | Msa1376640 | -0.829424 | 5.187497e-55 | -8.615850e-47 |
| Msa0429520 | Msa1377100 | 0.810617 | 1.054611e-50 | -8.615850e-47 |
| Msa0429520 | Msa1379980 | -0.829835 | 4.121052e-55 | -8.615850e-47 |
| Msa0429520 | Msa1381130 | -0.837527 | 4.933208e-57 | -8.615850e-47 |
| Msa0429520 | Msa1382310 | -0.850388 | 1.753990e-60 | -8.615850e-47 |
| Msa0429520 | Msa1385620 | -0.834620 | 2.697107e-56 | -8.615850e-47 |
| Msa0429520 | Msa1385900 | -0.833639 | 4.751418e-56 | -8.615850e-47 |
| Msa0429520 | Msa1389470 | -0.813210 | 2.872875e-51 | -8.615850e-47 |
| Msa0429520 | Msa1390310 | -0.888833 | 4.157480e-73 | -8.615850e-47 |
| Msa0429520 | Msa1391370 | -0.812144 | 4.915190e-51 | -8.615850e-47 |
| Msa0429520 | Msa1398860 | -0.832038 | 1.187549e-55 | -8.615850e-47 |
| Msa0429520 | Msa1404370 | -0.826601 | 2.480659e-54 | -8.615850e-47 |
| Msa0429520 | Msa1405770 | -0.838538 | 2.709696e-57 | -8.615850e-47 |
| Msa0429520 | Msa1406550 | -0.804552 | 2.044684e-49 | -8.615850e-47 |
| Msa0429520 | Msa1407710 | -0.805342 | 1.398269e-49 | -8.615850e-47 |
| Msa0429520 | Msa1412080 | -0.808412 | 3.136686e-50 | -8.615850e-47 |
| Msa0429520 | Msa1412520 | -0.807958 | 3.919773e-50 | -8.615850e-47 |
| Msa0429520 | Msa1421810 | -0.816803 | 4.581369e-52 | -8.615850e-47 |
| Msa0429520 | Msa1429360 | 0.921497 | 3.317418e-88 | -8.615850e-47 |
| Msa0429520 | Msa1432640 | -0.804207 | 2.413613e-49 | -8.615850e-47 |
| Msa0429520 | Msa1435040 | -0.831485 | 1.625297e-55 | -8.615850e-47 |
| Msa0429520 | Msa1435050 | -0.834815 | 2.409576e-56 | -8.615850e-47 |
| Msa0429520 | Msa1439670 | -0.839804 | 1.273002e-57 | -8.615850e-47 |
| Msa0429520 | Msa1439680 | -0.821215 | 4.544892e-53 | -8.615850e-47 |
| Msa0429520 | Msa1442220 | 0.826507 | 2.611558e-54 | -8.615850e-47 |
| Msa0429520 | Msa1442300 | -0.841495 | 4.590779e-58 | -8.615850e-47 |
| Msa0429520 | Msa1444450 | -0.820442 | 6.845484e-53 | -8.615850e-47 |
| Msa0429520 | Msa1447230 | -0.852832 | 3.562421e-61 | -8.615850e-47 |
| Msa0429520 | Msa1451840 | -0.820579 | 6.367044e-53 | -8.615850e-47 |
| Msa0429520 | Msa1456650 | -0.837903 | 3.949450e-57 | -8.615850e-47 |
| Msa0429520 | Msa1459390 | -0.848212 | 7.076687e-60 | -8.615850e-47 |
| Msa0429520 | Msa1464560 | -0.807689 | 4.471260e-50 | -8.615850e-47 |
| Msa0239660 | Msa0429520 | -0.854308 | 1.342517e-61 | -8.615850e-47 |
| Msa0246690 | Msa0429520 | -0.812611 | 3.885316e-51 | -8.615850e-47 |
| Msa0257130 | Msa0429520 | -0.810342 | 1.209009e-50 | -8.615850e-47 |
| Msa0259560 | Msa0429520 | -0.820838 | 5.549686e-53 | -8.615850e-47 |
| Msa0264350 | Msa0429520 | -0.845316 | 4.381977e-59 | -8.615850e-47 |
| Msa0267760 | Msa0429520 | -0.893509 | 5.882644e-75 | -8.615850e-47 |
| Msa0269270 | Msa0429520 | 0.832938 | 7.103219e-56 | -8.615850e-47 |
| Msa0269360 | Msa0429520 | -0.803628 | 3.183296e-49 | -8.615850e-47 |
| Msa0272480 | Msa0429520 | 0.816020 | 6.858328e-52 | -8.615850e-47 |
| Msa0274780 | Msa0429520 | -0.802315 | 5.948153e-49 | -8.615850e-47 |
| Msa0275030 | Msa0429520 | -0.823028 | 1.726400e-53 | -8.615850e-47 |
| Msa0275400 | Msa0429520 | 0.828379 | 9.290514e-55 | -8.615850e-47 |
| Msa0277640 | Msa0429520 | -0.848087 | 7.663870e-60 | -8.615850e-47 |
| Msa0280900 | Msa0429520 | -0.801098 | 1.057003e-48 | -8.615850e-47 |
| Msa0292290 | Msa0429520 | -0.823086 | 1.674049e-53 | -8.615850e-47 |
| Msa0298970 | Msa0429520 | -0.803589 | 3.243611e-49 | -8.615850e-47 |
| Msa0302450 | Msa0429520 | -0.846480 | 2.115737e-59 | -8.615850e-47 |
| Msa0315150 | Msa0429520 | -0.818101 | 2.336423e-52 | -8.615850e-47 |
| Msa0315480 | Msa0429520 | -0.826278 | 2.960814e-54 | -8.615850e-47 |
| Msa0317260 | Msa0429520 | -0.823691 | 1.208460e-53 | -8.615850e-47 |
| Msa0317830 | Msa0429520 | -0.800207 | 1.605906e-48 | -8.615850e-47 |
| Msa0328210 | Msa0429520 | -0.831324 | 1.780916e-55 | -8.615850e-47 |
| Msa0334980 | Msa0429520 | -0.814738 | 1.322441e-51 | -8.615850e-47 |
| Msa0339860 | Msa0429520 | -0.808024 | 3.795306e-50 | -8.615850e-47 |
| Msa0341460 | Msa0429520 | 0.816410 | 5.609729e-52 | -8.615850e-47 |
| Msa0344070 | Msa0429520 | -0.801951 | 7.066054e-49 | -8.615850e-47 |
| Msa0358230 | Msa0429520 | -0.805676 | 1.189769e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429520 | MtrunA17_Chr3g0133221 | 92.419 | 277 | 2 | 1 | 1 | 277 | 1 | 258 | 0.0 | 520 |
| Msa0429520 | MtrunA17_Chr8g0367701 | 71.667 | 180 | 51 | 0 | 97 | 276 | 90 | 269 | 2.49e-98 | 289 |
| Msa0429520 | MtrunA17_Chr7g0251801 | 47.475 | 198 | 94 | 3 | 78 | 274 | 86 | 274 | 3.79e-64 | 202 |
| Msa0429520 | MtrunA17_Chr2g0315771 | 47.030 | 202 | 102 | 3 | 79 | 275 | 25 | 226 | 3.69e-61 | 193 |
| Msa0429520 | MtrunA17_Chr1g0162171 | 39.623 | 159 | 95 | 1 | 117 | 274 | 62 | 220 | 1.32e-43 | 147 |
| Msa0429520 | MtrunA17_Chr6g0481891 | 38.994 | 159 | 96 | 1 | 117 | 274 | 38 | 196 | 1.99e-42 | 144 |
| Msa0429520 | MtrunA17_Chr8g0388871 | 37.654 | 162 | 97 | 2 | 116 | 274 | 22 | 182 | 2.88e-40 | 138 |
| Msa0429520 | MtrunA17_Chr1g0212091 | 36.413 | 184 | 107 | 3 | 93 | 274 | 43 | 218 | 3.61e-40 | 139 |
| Msa0429520 | MtrunA17_Chr1g0212121 | 35.849 | 159 | 101 | 1 | 117 | 274 | 57 | 215 | 4.98e-37 | 130 |
| Msa0429520 | MtrunA17_Chr1g0212171 | 35.185 | 162 | 104 | 1 | 114 | 274 | 57 | 218 | 9.80e-37 | 130 |
| Msa0429520 | MtrunA17_Chr1g0212181 | 35.583 | 163 | 103 | 2 | 117 | 277 | 57 | 219 | 3.95e-35 | 126 |
| Msa0429520 | MtrunA17_Chr1g0212111 | 43.396 | 106 | 59 | 1 | 170 | 274 | 49 | 154 | 3.20e-25 | 99.0 |
| Msa0429520 | MtrunA17_Chr1g0212131 | 41.071 | 56 | 33 | 0 | 219 | 274 | 6 | 61 | 6.62e-12 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429520 | AT1G28200.1 | 71.605 | 243 | 61 | 2 | 35 | 277 | 23 | 257 | 8.91e-123 | 351 |
| Msa0429520 | AT1G28200.2 | 71.605 | 243 | 61 | 2 | 35 | 277 | 23 | 257 | 8.91e-123 | 351 |
| Msa0429520 | AT2G22475.1 | 72.727 | 198 | 53 | 1 | 80 | 276 | 96 | 293 | 8.94e-110 | 320 |
| Msa0429520 | AT2G22475.2 | 72.603 | 146 | 39 | 1 | 80 | 224 | 96 | 241 | 1.58e-76 | 233 |
| Msa0429520 | AT4G40100.1 | 57.789 | 199 | 47 | 4 | 80 | 276 | 55 | 218 | 6.32e-73 | 223 |
| Msa0429520 | AT5G13200.1 | 44.444 | 216 | 111 | 3 | 56 | 270 | 49 | 256 | 2.88e-59 | 190 |
| Msa0429520 | AT4G01600.1 | 42.211 | 199 | 108 | 3 | 80 | 274 | 29 | 224 | 1.21e-54 | 177 |
| Msa0429520 | AT4G01600.3 | 42.135 | 178 | 101 | 1 | 99 | 274 | 8 | 185 | 1.10e-51 | 168 |
| Msa0429520 | AT4G01600.2 | 41.206 | 199 | 105 | 4 | 80 | 274 | 29 | 219 | 1.25e-50 | 166 |
| Msa0429520 | AT5G23350.1 | 34.259 | 216 | 133 | 4 | 64 | 274 | 2 | 213 | 5.27e-40 | 139 |
| Msa0429520 | AT5G23360.1 | 36.875 | 160 | 98 | 2 | 117 | 274 | 47 | 205 | 1.43e-38 | 135 |
| Msa0429520 | AT5G08350.1 | 33.831 | 201 | 116 | 4 | 76 | 274 | 27 | 212 | 3.81e-38 | 134 |
| Msa0429520 | AT5G23370.1 | 33.333 | 219 | 131 | 6 | 64 | 274 | 2 | 213 | 3.95e-38 | 134 |
| Msa0429520 | AT5G13200.2 | 42.515 | 167 | 87 | 3 | 56 | 221 | 49 | 207 | 1.65e-37 | 132 |
Find 104 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCGTTGTTACTTGTTTC+TGG | 0.126004 | 3_2:+80958166 | Msa0429520:three_prime_UTR |
| AATAAATAATTTGACGGTTT+TGG | 0.134533 | 3_2:+80953415 | Msa0429520:five_prime_UTR |
| CCGTTGACAATCATGAATTT+TGG | 0.145817 | 3_2:+80957923 | Msa0429520:CDS |
| TGAAAGATGTTCTTGGAAAA+TGG | 0.239709 | 3_2:+80953991 | Msa0429520:CDS |
| AGCAAGATCTTCAGCCTTCT+TGG | 0.287689 | 3_2:-80954036 | None:intergenic |
| GAATCAGAGTCTTGGGGTTT+GGG | 0.291767 | 3_2:-80953687 | None:intergenic |
| TTGTGTTGGTGGCTTGGACT+TGG | 0.309723 | 3_2:-80953650 | None:intergenic |
| ACGTCGTTTGGGTCGAGTTT+AGG | 0.310396 | 3_2:-80953741 | None:intergenic |
| TTTAGGATACGGAGCGTAAT+CGG | 0.313258 | 3_2:-80953724 | None:intergenic |
| GGTGGTGGTGCGACGTCGTT+TGG | 0.326020 | 3_2:-80953753 | None:intergenic |
| ATATTATTACATTCTAAATC+TGG | 0.330201 | 3_2:+80958216 | Msa0429520:three_prime_UTR |
| AAATGCCAATAGGTTCCTTC+AGG | 0.335160 | 3_2:+80953275 | Msa0429520:five_prime_UTR |
| TGTGTTGGTGGCTTGGACTT+GGG | 0.349299 | 3_2:-80953649 | None:intergenic |
| AGAATCAGAGTCTTGGGGTT+TGG | 0.350975 | 3_2:-80953688 | None:intergenic |
| ATTTAAACATGATAGTTATA+TGG | 0.356108 | 3_2:+80958269 | Msa0429520:three_prime_UTR |
| GATTCGGTGAAAGATGTTCT+TGG | 0.357881 | 3_2:+80953984 | Msa0429520:CDS |
| TGCTACCTCTCCACCTCTGC+TGG | 0.362383 | 3_2:+80955284 | Msa0429520:CDS |
| ATAGGTTCCTTCAGGGTTAG+AGG | 0.371485 | 3_2:+80953283 | Msa0429520:five_prime_UTR |
| CTCTTAGCAGAAGTGGGTTC+GGG | 0.375941 | 3_2:-80953864 | None:intergenic |
| GACTCAATGGAGCTATTATA+AGG | 0.381490 | 3_2:+80955391 | Msa0429520:CDS |
| GCAGAAGTGGGTTCGGGAAC+TGG | 0.387440 | 3_2:-80953858 | None:intergenic |
| TTAGGATACGGAGCGTAATC+GGG | 0.390438 | 3_2:-80953723 | None:intergenic |
| TTGTGTTTGTGTTGGTGGCT+TGG | 0.390507 | 3_2:-80953656 | None:intergenic |
| TACTTCCTTAGTCTAGTTTG+TGG | 0.390817 | 3_2:+80958116 | Msa0429520:three_prime_UTR |
| GGGTTGGCTTTGCTTGTGGA+TGG | 0.392668 | 3_2:-80957874 | None:intergenic |
| CACCTCTGCTGGACCTGTCA+TGG | 0.396719 | 3_2:+80955295 | Msa0429520:CDS |
| GGTGTTTGTGTTTGTGTTGG+TGG | 0.398095 | 3_2:-80953661 | None:intergenic |
| GAAAGATGTTCTTGGAAAAT+GGG | 0.402168 | 3_2:+80953992 | Msa0429520:CDS |
| AGAGTCTTGGGGTTTGGGAT+TGG | 0.404551 | 3_2:-80953682 | None:intergenic |
| TGCTCAGGGAACAAAAGTTC+TGG | 0.404565 | 3_2:+80955184 | Msa0429520:CDS |
| ATCAACACAGACCTCATGTT+TGG | 0.406142 | 3_2:-80958045 | None:intergenic |
| ACTCTTAGCAGAAGTGGGTT+CGG | 0.407099 | 3_2:-80953865 | None:intergenic |
| AGAGTGAGAATCAGAGTCTT+GGG | 0.416127 | 3_2:-80953694 | None:intergenic |
| TTCCTTCAGGGTTAGAGGTT+AGG | 0.421275 | 3_2:+80953288 | Msa0429520:five_prime_UTR |
| ATTGAGTCTGGTCACCAGTC+TGG | 0.437061 | 3_2:-80955376 | None:intergenic |
| AAGAAGGCTGAAGATCTTGC+TGG | 0.439141 | 3_2:+80954038 | Msa0429520:CDS |
| GGTTGGCTTTGCTTGTGGAT+GGG | 0.441303 | 3_2:-80957873 | None:intergenic |
| TTCCATAAAACAGTGAAAAC+AGG | 0.443896 | 3_2:+80955128 | Msa0429520:intron |
| TCAGGGTTAGAGGTTAGGTT+AGG | 0.447915 | 3_2:+80953293 | Msa0429520:five_prime_UTR |
| AGTCAAAATAAATAATTTGA+CGG | 0.449268 | 3_2:+80953409 | Msa0429520:five_prime_UTR |
| TGCTGTGGGAAGAATTGCTC+AGG | 0.454151 | 3_2:+80955169 | Msa0429520:CDS |
| GGGCATGGTGGTGGCAGCAT+CGG | 0.455840 | 3_2:-80953805 | None:intergenic |
| TATAATAGCTCCATTGAGTC+TGG | 0.472016 | 3_2:-80955388 | None:intergenic |
| GTGGGTTCGGGAACTGGTGC+AGG | 0.472656 | 3_2:-80953852 | None:intergenic |
| CTGAAACGTGAATACGTGAA+TGG | 0.474225 | 3_2:-80953496 | None:intergenic |
| CTAACCCTGAAGGAACCTAT+TGG | 0.480999 | 3_2:-80953280 | None:intergenic |
| GGGATTAGATTCGGCGGGCA+TGG | 0.481538 | 3_2:-80953820 | None:intergenic |
| ACCTCTGCTGGACCTGTCAT+GGG | 0.481952 | 3_2:+80955296 | Msa0429520:CDS |
| GCAGTCTCGCTGATACACTA+TGG | 0.482340 | 3_2:+80957999 | Msa0429520:exon |
| TGGACTTGGGCTTGAACATG+AGG | 0.487381 | 3_2:-80953636 | None:intergenic |
| TCGATCGATTTGTTGTAAGT+TGG | 0.489993 | 3_2:+80958242 | Msa0429520:three_prime_UTR |
| ATTGGTGTTTGTGTTTGTGT+TGG | 0.490015 | 3_2:-80953664 | None:intergenic |
| AGATTCGGCGGGCATGGTGG+TGG | 0.492264 | 3_2:-80953814 | None:intergenic |
| CATGGTGGTGGCAGCATCGG+TGG | 0.493757 | 3_2:-80953802 | None:intergenic |
| GCGCGAGATTCAGTAGCAAC+AGG | 0.494862 | 3_2:-80953780 | None:intergenic |
| AGTAGGGTTGGCTTTGCTTG+TGG | 0.497012 | 3_2:-80957878 | None:intergenic |
| GTGGTGGTGCGACGTCGTTT+GGG | 0.498600 | 3_2:-80953752 | None:intergenic |
| CAGCTCCACAAACTAGACTA+AGG | 0.505325 | 3_2:-80958121 | None:intergenic |
| GAGAGTGAGAATCAGAGTCT+TGG | 0.511071 | 3_2:-80953695 | None:intergenic |
| AACTGGTGCAGGAGAGACAT+AGG | 0.514578 | 3_2:-80953841 | None:intergenic |
| ATTGTTGACTTGAGGAGGAT+CGG | 0.514814 | 3_2:-80953577 | None:intergenic |
| TTCAATTCAAACTCAAGTTG+AGG | 0.515568 | 3_2:-80953527 | None:intergenic |
| TGAAACGTGAATACGTGAAT+GGG | 0.516841 | 3_2:-80953495 | None:intergenic |
| TCAGTAGCAACAGGTGGTGG+TGG | 0.526626 | 3_2:-80953771 | None:intergenic |
| GAAATTACTCTTAGCAGAAG+TGG | 0.529017 | 3_2:-80953871 | None:intergenic |
| GTAGCAACAGGTGGTGGTGG+TGG | 0.530974 | 3_2:-80953768 | None:intergenic |
| GATTCAGTAGCAACAGGTGG+TGG | 0.532264 | 3_2:-80953774 | None:intergenic |
| AGACTGGTGACCAGACTCAA+TGG | 0.534492 | 3_2:+80955378 | Msa0429520:CDS |
| AAATTACTCTTAGCAGAAGT+GGG | 0.535463 | 3_2:-80953870 | None:intergenic |
| AGAGACATAGGGATTAGATT+CGG | 0.541864 | 3_2:-80953829 | None:intergenic |
| TTTGGGTCGAGTTTAGGATA+CGG | 0.542371 | 3_2:-80953735 | None:intergenic |
| CTCATATTGTTGACTTGAGG+AGG | 0.542882 | 3_2:-80953582 | None:intergenic |
| CATGACAGGTCCAGCAGAGG+TGG | 0.545232 | 3_2:-80955294 | None:intergenic |
| AATGCCAATAGGTTCCTTCA+GGG | 0.546428 | 3_2:+80953276 | Msa0429520:five_prime_UTR |
| ACTGCTCGCAGCTGATGCAA+TGG | 0.553859 | 3_2:-80957847 | None:intergenic |
| TCACCAGTCTGGTAAGAAAG+TGG | 0.556592 | 3_2:-80955365 | None:intergenic |
| TGAACATGAGGTTGAACTTG+AGG | 0.558806 | 3_2:-80953624 | None:intergenic |
| AACCCACTTTCTTACCAGAC+TGG | 0.563921 | 3_2:+80955362 | Msa0429520:CDS |
| CCAAAATTCATGATTGTCAA+CGG | 0.566250 | 3_2:-80957923 | None:intergenic |
| ACATAGGGATTAGATTCGGC+GGG | 0.570583 | 3_2:-80953825 | None:intergenic |
| TAGGATACGGAGCGTAATCG+GGG | 0.571711 | 3_2:-80953722 | None:intergenic |
| ACAGCAGCATCAGCAAAACT+AGG | 0.577655 | 3_2:-80955152 | None:intergenic |
| AAATACAAGACTCCCATGAC+AGG | 0.580237 | 3_2:-80955308 | None:intergenic |
| GACATAGGGATTAGATTCGG+CGG | 0.580305 | 3_2:-80953826 | None:intergenic |
| CTGCTCATATTGTTGACTTG+AGG | 0.581802 | 3_2:-80953585 | None:intergenic |
| CAGGTCCAGCAGAGGTGGAG+AGG | 0.582547 | 3_2:-80955289 | None:intergenic |
| ATTAGATTCGGCGGGCATGG+TGG | 0.585883 | 3_2:-80953817 | None:intergenic |
| AGCTGCTGAAGCTACCAAGA+AGG | 0.592291 | 3_2:+80954022 | Msa0429520:CDS |
| AAAGATGTTCTTGGAAAATG+GGG | 0.592681 | 3_2:+80953993 | Msa0429520:CDS |
| GTCAACAATATGAGCAGTGG+TGG | 0.593987 | 3_2:+80953591 | Msa0429520:exon |
| CACCAGTCTGGTAAGAAAGT+GGG | 0.607437 | 3_2:-80955364 | None:intergenic |
| GGAACAAAAGTTCTGGCAGA+AGG | 0.613260 | 3_2:+80955191 | Msa0429520:CDS |
| AACCTAACCTCTAACCCTGA+AGG | 0.623990 | 3_2:-80953290 | None:intergenic |
| ACTGGTGCAGGAGAGACATA+GGG | 0.634538 | 3_2:-80953840 | None:intergenic |
| TCCCATGACAGGTCCAGCAG+AGG | 0.644056 | 3_2:-80955297 | None:intergenic |
| CAAGTCAACAATATGAGCAG+TGG | 0.644143 | 3_2:+80953588 | Msa0429520:exon |
| GAGTGAGAATCAGAGTCTTG+GGG | 0.647869 | 3_2:-80953693 | None:intergenic |
| ACAAAAGTTCTGGCAGAAGG+TGG | 0.648034 | 3_2:+80955194 | Msa0429520:CDS |
| AAGATCTTGCTGGAAACATG+TGG | 0.657196 | 3_2:+80954048 | Msa0429520:CDS |
| ACATGAGGTTGAACTTGAGG+AGG | 0.662022 | 3_2:-80953621 | None:intergenic |
| AGGATACGGAGCGTAATCGG+GGG | 0.674476 | 3_2:-80953721 | None:intergenic |
| CGAGATTCAGTAGCAACAGG+TGG | 0.675679 | 3_2:-80953777 | None:intergenic |
| CATGTAGTATACCAAACATG+AGG | 0.682970 | 3_2:+80958034 | Msa0429520:three_prime_UTR |
| GCTGTGGGAAGAATTGCTCA+GGG | 0.687709 | 3_2:+80955170 | Msa0429520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATAATATATTAAATTTT+AGG | + | chr3_2:80957127-80957146 | Msa0429520:intron | 0.0% |
| !!! | AAATAATATATTAAATTTTA+GGG | + | chr3_2:80957128-80957147 | Msa0429520:intron | 0.0% |
| !!! | TTTTGTAATGTTTATTTTAA+GGG | + | chr3_2:80954841-80954860 | Msa0429520:intron | 10.0% |
| !! | GCTATAAAATTAATTAAAAT+AGG | - | chr3_2:80955037-80955056 | None:intergenic | 10.0% |
| !!! | ATTTTAATTAATTTTATAGC+TGG | + | chr3_2:80955037-80955056 | Msa0429520:intron | 10.0% |
| !! | AAAAAAAAGTAAAAATGCAA+CGG | + | chr3_2:80953350-80953369 | Msa0429520:five_prime_UTR | 15.0% |
| !! | AGTCAAAATAAATAATTTGA+CGG | + | chr3_2:80953409-80953428 | Msa0429520:five_prime_UTR | 15.0% |
| !! | CTTAAATGAATTTGAATAAT+TGG | - | chr3_2:80954112-80954131 | None:intergenic | 15.0% |
| !!! | CTTTTGTAATGTTTATTTTA+AGG | + | chr3_2:80954840-80954859 | Msa0429520:intron | 15.0% |
| !!! | TGAAATATTTGACTTTTTTA+TGG | - | chr3_2:80954924-80954943 | None:intergenic | 15.0% |
| !!! | TATTCATAAAATTTTGCTAT+AGG | - | chr3_2:80955576-80955595 | None:intergenic | 15.0% |
| !!! | TTTAATTAACATGAGATTTT+TGG | + | chr3_2:80955750-80955769 | Msa0429520:intron | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | chr3_2:80955872-80955891 | None:intergenic | 15.0% |
| !!! | TAGTTTTATAAGTAATACTT+TGG | - | chr3_2:80955975-80955994 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr3_2:80955999-80956018 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr3_2:80955998-80956017 | Msa0429520:intron | 15.0% |
| !!! | ACATGTTTATTTTTTTTTGA+AGG | + | chr3_2:80956333-80956352 | Msa0429520:intron | 15.0% |
| !! | ACAAAAGGTTATAAAATTTA+GGG | - | chr3_2:80956730-80956749 | None:intergenic | 15.0% |
| !! | AACAAAAGGTTATAAAATTT+AGG | - | chr3_2:80956731-80956750 | None:intergenic | 15.0% |
| !! | AACAAAGGTTATAAAATTTA+GGG | - | chr3_2:80957341-80957360 | None:intergenic | 15.0% |
| !! | AATGTAATCTATTAATCATA+CGG | - | chr3_2:80957651-80957670 | None:intergenic | 15.0% |
| !! | ATATTATTACATTCTAAATC+TGG | + | chr3_2:80958216-80958235 | Msa0429520:three_prime_UTR | 15.0% |
| !! | ATTTAAACATGATAGTTATA+TGG | + | chr3_2:80958269-80958288 | Msa0429520:three_prime_UTR | 15.0% |
| !!! | AATAAATAATTTGACGGTTT+TGG | + | chr3_2:80953415-80953434 | Msa0429520:five_prime_UTR | 20.0% |
| !!! | ATAAATAATTTGACGGTTTT+GGG | + | chr3_2:80953416-80953435 | Msa0429520:five_prime_UTR | 20.0% |
| !! | TAATTGGAAGTAAAAGAATT+AGG | - | chr3_2:80954096-80954115 | None:intergenic | 20.0% |
| !! | GCTATTCAATAAATATTTCT+TGG | + | chr3_2:80954131-80954150 | Msa0429520:intron | 20.0% |
| !! | AATTAGAATAGATTGAATGA+AGG | + | chr3_2:80954609-80954628 | Msa0429520:intron | 20.0% |
| !! | ATTAGAATAGATTGAATGAA+GGG | + | chr3_2:80954610-80954629 | Msa0429520:intron | 20.0% |
| !!! | TAATCTCTACACTTTTTTAA+TGG | - | chr3_2:80954689-80954708 | None:intergenic | 20.0% |
| !! | TATTTATGTAATCAAAGCAT+CGG | - | chr3_2:80954951-80954970 | None:intergenic | 20.0% |
| !!! | ATTAATTTTATAGCTGGAAA+TGG | + | chr3_2:80955043-80955062 | Msa0429520:intron | 20.0% |
| !! | TTGTTCTTTAATAACTGATT+TGG | + | chr3_2:80955448-80955467 | Msa0429520:intron | 20.0% |
| !! | TAATCATCCAAAATAATTTC+AGG | - | chr3_2:80955795-80955814 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr3_2:80955912-80955931 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr3_2:80955989-80956008 | Msa0429520:intron | 20.0% |
| !!! | ATAGATTTTAGATGTATCTA+GGG | + | chr3_2:80956275-80956294 | Msa0429520:intron | 20.0% |
| !! | TAATTCCTCGAAAAAAATAT+TGG | - | chr3_2:80956314-80956333 | None:intergenic | 20.0% |
| !! | TATCTGATTATAACATTTGT+TGG | + | chr3_2:80956579-80956598 | Msa0429520:intron | 20.0% |
| !! | ATCTGATTATAACATTTGTT+GGG | + | chr3_2:80956580-80956599 | Msa0429520:intron | 20.0% |
| !!! | TACTTTTAATCACAACAAAA+AGG | - | chr3_2:80956969-80956988 | None:intergenic | 20.0% |
| !! | CAAGCAATTTATATTAAGAT+TGG | + | chr3_2:80957036-80957055 | Msa0429520:intron | 20.0% |
| !! | AGATATATTGTATTGAGAAA+TGG | + | chr3_2:80957193-80957212 | Msa0429520:intron | 20.0% |
| !! | CAACAAAGGTTATAAAATTT+AGG | - | chr3_2:80957342-80957361 | None:intergenic | 20.0% |
| !! | TTGAGAATAAATGTTATCTT+TGG | + | chr3_2:80957676-80957695 | Msa0429520:intron | 20.0% |
| !!! | GTCATATTTTTTCTATTGTT+TGG | + | chr3_2:80957778-80957797 | Msa0429520:intron | 20.0% |
| !!! | TCTGTATAAATTTTTCAGTA+GGG | - | chr3_2:80957897-80957916 | None:intergenic | 20.0% |
| !!! | ATCTGTATAAATTTTTCAGT+AGG | - | chr3_2:80957898-80957917 | None:intergenic | 20.0% |
| !!! | AATCATGAATTTTGGTTTAT+GGG | + | chr3_2:80957931-80957950 | Msa0429520:CDS | 20.0% |
| !! | TAAAGTATCTGCAAAATCAA+AGG | - | chr3_2:80953964-80953983 | None:intergenic | 25.0% |
| !! | TTTTGCAGATACTTTAGATT+CGG | + | chr3_2:80953968-80953987 | Msa0429520:intron | 25.0% |
| !! | ATTTTTACTTTGTATGTGCA+TGG | + | chr3_2:80954223-80954242 | Msa0429520:intron | 25.0% |
| ! | CTAATTACGACAAAATTTAG+AGG | - | chr3_2:80954595-80954614 | None:intergenic | 25.0% |
| !! | GGTTTCTCTTATAATTTTCT+AGG | - | chr3_2:80954668-80954687 | None:intergenic | 25.0% |
| ! | TAAAATAGGGAAATGTTAAC+CGG | - | chr3_2:80955023-80955042 | None:intergenic | 25.0% |
| ! | TCAGTTATTAAAGAACAAAG+CGG | - | chr3_2:80955446-80955465 | None:intergenic | 25.0% |
| !! | TGATTATTTCTCAATACTAG+AGG | + | chr3_2:80955510-80955529 | Msa0429520:intron | 25.0% |
| ! | ATTAAAAAATCCTCAAATGC+TGG | - | chr3_2:80955736-80955755 | None:intergenic | 25.0% |
| ! | AATGATTAAGAGAAAGAGAA+TGG | - | chr3_2:80956032-80956051 | None:intergenic | 25.0% |
| !! | CATCTAAAATCTATGAGTAT+TGG | - | chr3_2:80956269-80956288 | None:intergenic | 25.0% |
| !! | CATAGATTTTAGATGTATCT+AGG | + | chr3_2:80956274-80956293 | Msa0429520:intron | 25.0% |
| !!! | TTTTTTTGAAGGATTTTTCG+AGG | + | chr3_2:80956344-80956363 | Msa0429520:intron | 25.0% |
| !!! | GAACAAGTAGCTATTTTTTT+TGG | - | chr3_2:80956464-80956483 | None:intergenic | 25.0% |
| !! | TCTGATTATAACATTTGTTG+GGG | + | chr3_2:80956581-80956600 | Msa0429520:intron | 25.0% |
| !! | ACATAATTCTTTTGATGTTG+AGG | + | chr3_2:80957517-80957536 | Msa0429520:intron | 25.0% |
| !! | CATAATTCTTTTGATGTTGA+GGG | + | chr3_2:80957518-80957537 | Msa0429520:intron | 25.0% |
| ! | GAATAAATGTTATCTTTGGA+TGG | + | chr3_2:80957680-80957699 | Msa0429520:intron | 25.0% |
| !!! | TATAAATTTTTCAGTAGGGT+TGG | - | chr3_2:80957893-80957912 | None:intergenic | 25.0% |
| !!! | CAATCATGAATTTTGGTTTA+TGG | + | chr3_2:80957930-80957949 | Msa0429520:CDS | 25.0% |
| !!! | TTTCATGTTTTTGTGAATTG+AGG | - | chr3_2:80958078-80958097 | None:intergenic | 25.0% |
| TCAAAAAACGAAATGCCAAT+AGG | + | chr3_2:80953265-80953284 | Msa0429520:five_prime_UTR | 30.0% | |
| ! | TTCAATTCAAACTCAAGTTG+AGG | - | chr3_2:80953530-80953549 | None:intergenic | 30.0% |
| AAATTACTCTTAGCAGAAGT+GGG | - | chr3_2:80953873-80953892 | None:intergenic | 30.0% | |
| TATCTGCAAAATCAAAGGAT+AGG | - | chr3_2:80953959-80953978 | None:intergenic | 30.0% | |
| TGAAAGATGTTCTTGGAAAA+TGG | + | chr3_2:80953991-80954010 | Msa0429520:CDS | 30.0% | |
| GAAAGATGTTCTTGGAAAAT+GGG | + | chr3_2:80953992-80954011 | Msa0429520:CDS | 30.0% | |
| AAAGATGTTCTTGGAAAATG+GGG | + | chr3_2:80953993-80954012 | Msa0429520:CDS | 30.0% | |
| !!! | CGCTTATTTTATTCTAGTGT+TGG | - | chr3_2:80954428-80954447 | None:intergenic | 30.0% |
| AAGTGTAGAGATTAATGAGT+TGG | + | chr3_2:80954695-80954714 | Msa0429520:intron | 30.0% | |
| ! | AGAGATTAATGAGTTGGATA+AGG | + | chr3_2:80954701-80954720 | Msa0429520:intron | 30.0% |
| ! | AAGCTTTATCCAATTAAGTG+GGG | - | chr3_2:80954775-80954794 | None:intergenic | 30.0% |
| ! | CAAGCTTTATCCAATTAAGT+GGG | - | chr3_2:80954776-80954795 | None:intergenic | 30.0% |
| AGAAAACACAGAAAGTAAAC+TGG | + | chr3_2:80955070-80955089 | Msa0429520:intron | 30.0% | |
| GTCAAAATAGCTCAAATGAA+TGG | - | chr3_2:80955107-80955126 | None:intergenic | 30.0% | |
| TTCCATAAAACAGTGAAAAC+AGG | + | chr3_2:80955128-80955147 | Msa0429520:intron | 30.0% | |
| GTAATGCAGTATACATATCA+TGG | - | chr3_2:80955476-80955495 | None:intergenic | 30.0% | |
| AATGACTCCAACTAAATTTC+CGG | - | chr3_2:80955631-80955650 | None:intergenic | 30.0% | |
| ! | ATTGATATTTGAGGTTCCAA+GGG | - | chr3_2:80955686-80955705 | None:intergenic | 30.0% |
| ACTGACATGATTGATATTTG+AGG | - | chr3_2:80955695-80955714 | None:intergenic | 30.0% | |
| !!! | GATTTTTGGAATTCGAAGAA+AGG | + | chr3_2:80955764-80955783 | Msa0429520:intron | 30.0% |
| !! | TATTTTGGATGATTACCCTT+AGG | + | chr3_2:80955800-80955819 | Msa0429520:intron | 30.0% |
| ! | ATTTTGGATGATTACCCTTA+GGG | + | chr3_2:80955801-80955820 | Msa0429520:intron | 30.0% |
| GTATTACTTAAGATCCCTAA+GGG | - | chr3_2:80955818-80955837 | None:intergenic | 30.0% | |
| AGTATTACTTAAGATCCCTA+AGG | - | chr3_2:80955819-80955838 | None:intergenic | 30.0% | |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr3_2:80956080-80956099 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr3_2:80956081-80956100 | Msa0429520:intron | 30.0% |
| ! | AAATCAAGGATTCCCTTTTA+CGG | + | chr3_2:80956157-80956176 | Msa0429520:intron | 30.0% |
| ! | TCCAAATTTGAAGTATGAGT+GGG | + | chr3_2:80956212-80956231 | Msa0429520:intron | 30.0% |
| TATTGGACATGTACTAGTAT+CGG | - | chr3_2:80956252-80956271 | None:intergenic | 30.0% | |
| ! | ATTTTAGATGTATCTAGGGA+AGG | + | chr3_2:80956279-80956298 | Msa0429520:intron | 30.0% |
| ! | TTTTAGATGTATCTAGGGAA+GGG | + | chr3_2:80956280-80956299 | Msa0429520:intron | 30.0% |
| !!! | ATGCTCCAATATTTTTTTCG+AGG | + | chr3_2:80956306-80956325 | Msa0429520:intron | 30.0% |
| ! | TTGGAGTAGTGTTTAAAATG+TGG | - | chr3_2:80956382-80956401 | None:intergenic | 30.0% |
| AAACACTACTCCAATACAAT+TGG | + | chr3_2:80956388-80956407 | Msa0429520:intron | 30.0% | |
| AACACTACTCCAATACAATT+GGG | + | chr3_2:80956389-80956408 | Msa0429520:intron | 30.0% | |
| ATGATGTATCCCAATTGTAT+TGG | - | chr3_2:80956401-80956420 | None:intergenic | 30.0% | |
| ! | TTGTTCAACCTTTTTCTTCA+TGG | + | chr3_2:80956478-80956497 | Msa0429520:intron | 30.0% |
| ! | CTGATTATAACATTTGTTGG+GGG | + | chr3_2:80956582-80956601 | Msa0429520:intron | 30.0% |
| ! | TGATTATAACATTTGTTGGG+GGG | + | chr3_2:80956583-80956602 | Msa0429520:intron | 30.0% |
| ! | TAACGTAAACCTACTACTTT+TGG | + | chr3_2:80956651-80956670 | Msa0429520:intron | 30.0% |
| TTAAGGAAACCAAAAGTAGT+AGG | - | chr3_2:80956663-80956682 | None:intergenic | 30.0% | |
| ! | AACCTTTTGTTGATGTAACT+AGG | + | chr3_2:80956740-80956759 | Msa0429520:intron | 30.0% |
| AAGGAACTCTTAAAAACTCA+GGG | - | chr3_2:80956783-80956802 | None:intergenic | 30.0% | |
| TAAGGAACTCTTAAAAACTC+AGG | - | chr3_2:80956784-80956803 | None:intergenic | 30.0% | |
| ACTTTGAACCAAACCAATAT+CGG | - | chr3_2:80956823-80956842 | None:intergenic | 30.0% | |
| ! | CATAATTCTTTTGATGTCGA+GGG | + | chr3_2:80956874-80956893 | Msa0429520:intron | 30.0% |
| TATTGAGAAATGGTAAAACG+TGG | + | chr3_2:80957203-80957222 | Msa0429520:intron | 30.0% | |
| TTAAGGAAACCAAAAGTAGT+AGG | - | chr3_2:80956663-80956682 | None:intergenic | 30.0% | |
| TAACCTTTGTTGATGTAACT+AGG | + | chr3_2:80957350-80957369 | Msa0429520:intron | 30.0% | |
| CATATATGTTTCCCCAATAT+TGG | + | chr3_2:80957451-80957470 | Msa0429520:intron | 30.0% | |
| TTTGAACCAAACCAATATTG+GGG | - | chr3_2:80957465-80957484 | None:intergenic | 30.0% | |
| CTTTGAACCAAACCAATATT+GGG | - | chr3_2:80957466-80957485 | None:intergenic | 30.0% | |
| ACTTTGAACCAAACCAATAT+TGG | - | chr3_2:80956823-80956842 | None:intergenic | 30.0% | |
| CATCAAAAGAATTATGTGTC+TGG | - | chr3_2:80957514-80957533 | None:intergenic | 30.0% | |
| !! | TTTTGATGTTGAGGGTATAA+AGG | + | chr3_2:80957526-80957545 | Msa0429520:intron | 30.0% |
| AGGATACAATGAGTAAGAAT+GGG | - | chr3_2:80957597-80957616 | None:intergenic | 30.0% | |
| GATTAGTGACTACACTTATA+TGG | + | chr3_2:80957704-80957723 | Msa0429520:intron | 30.0% | |
| ! | AGCTTTTCATCTTATGCATT+AGG | + | chr3_2:80957816-80957835 | Msa0429520:intron | 30.0% |
| ! | TTTTCATCTTATGCATTAGG+TGG | + | chr3_2:80957819-80957838 | Msa0429520:intron | 30.0% |
| CCAAAATTCATGATTGTCAA+CGG | - | chr3_2:80957926-80957945 | None:intergenic | 30.0% | |
| TGAAACGTGAATACGTGAAT+GGG | - | chr3_2:80953498-80953517 | None:intergenic | 35.0% | |
| ! | ATTGGTGTTTGTGTTTGTGT+TGG | - | chr3_2:80953667-80953686 | None:intergenic | 35.0% |
| AGAGACATAGGGATTAGATT+CGG | - | chr3_2:80953832-80953851 | None:intergenic | 35.0% | |
| GAAATTACTCTTAGCAGAAG+TGG | - | chr3_2:80953874-80953893 | None:intergenic | 35.0% | |
| TTGTGATCAAGAGAAGATAG+AGG | + | chr3_2:80954278-80954297 | Msa0429520:intron | 35.0% | |
| !! | TTGTATGTGAAGGAAGTGTT+GGG | + | chr3_2:80954392-80954411 | Msa0429520:intron | 35.0% |
| TAGAATTAGAGAGAGAGTTG+AGG | + | chr3_2:80954497-80954516 | Msa0429520:intron | 35.0% | |
| CAGAAAAGATGCTAGAAACT+AGG | + | chr3_2:80954532-80954551 | Msa0429520:intron | 35.0% | |
| TTTATCCAATTAAGTGGGGT+AGG | - | chr3_2:80954771-80954790 | None:intergenic | 35.0% | |
| ! | CCAAGCTTTATCCAATTAAG+TGG | - | chr3_2:80954777-80954796 | None:intergenic | 35.0% |
| CCACTTAATTGGATAAAGCT+TGG | + | chr3_2:80954774-80954793 | Msa0429520:intron | 35.0% | |
| !! | AAATGTCTTAAAAAGTGCCC+CGG | + | chr3_2:80954992-80955011 | Msa0429520:intron | 35.0% |
| ! | GACCTGTTTTCACTGTTTTA+TGG | - | chr3_2:80955133-80955152 | None:intergenic | 35.0% |
| !!! | GTTTTAAGAAGTTGTTCCTC+TGG | - | chr3_2:80955257-80955276 | None:intergenic | 35.0% |
| TATAATAGCTCCATTGAGTC+TGG | - | chr3_2:80955391-80955410 | None:intergenic | 35.0% | |
| GACTCAATGGAGCTATTATA+AGG | + | chr3_2:80955391-80955410 | Msa0429520:CDS | 35.0% | |
| AAATTTCCGGGACACAAATT+GGG | - | chr3_2:80955618-80955637 | None:intergenic | 35.0% | |
| TAAATTTCCGGGACACAAAT+TGG | - | chr3_2:80955619-80955638 | None:intergenic | 35.0% | |
| ATGACTCCAACTAAATTTCC+GGG | - | chr3_2:80955630-80955649 | None:intergenic | 35.0% | |
| ! | GATTGATATTTGAGGTTCCA+AGG | - | chr3_2:80955687-80955706 | None:intergenic | 35.0% |
| ACTAATATCACCAGCATTTG+AGG | + | chr3_2:80955723-80955742 | Msa0429520:intron | 35.0% | |
| ! | GGTGCTTCCTGAAATTATTT+TGG | + | chr3_2:80955785-80955804 | Msa0429520:intron | 35.0% |
| !!! | GACACTCATTTTGAAATGGA+GGG | - | chr3_2:80955842-80955861 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+TGG | - | chr3_2:80955846-80955865 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr3_2:80955946-80955965 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr3_2:80955950-80955969 | None:intergenic | 35.0% |
| AAGGCAACATAACTGAACAT+GGG | - | chr3_2:80956132-80956151 | None:intergenic | 35.0% | |
| AAAGGCAACATAACTGAACA+TGG | - | chr3_2:80956133-80956152 | None:intergenic | 35.0% | |
| TGTTGCCTTTCTTGAAATCA+AGG | + | chr3_2:80956143-80956162 | Msa0429520:intron | 35.0% | |
| GGAATCCTTGATTTCAAGAA+AGG | - | chr3_2:80956151-80956170 | None:intergenic | 35.0% | |
| ! | ACTTCAAATTTGGAGTACCT+GGG | - | chr3_2:80956206-80956225 | None:intergenic | 35.0% |
| ! | TACTTCAAATTTGGAGTACC+TGG | - | chr3_2:80956207-80956226 | None:intergenic | 35.0% |
| ! | CTCCAAATTTGAAGTATGAG+TGG | + | chr3_2:80956211-80956230 | Msa0429520:intron | 35.0% |
| ACCCACTCATACTTCAAATT+TGG | - | chr3_2:80956216-80956235 | None:intergenic | 35.0% | |
| ! | ACATGTACTAGTATCGGATA+CGG | - | chr3_2:80956246-80956265 | None:intergenic | 35.0% |
| ! | GAGTAGTGTTTAAAATGTGG+CGG | - | chr3_2:80956379-80956398 | None:intergenic | 35.0% |
| AGACAACACCATGAAGAAAA+AGG | - | chr3_2:80956489-80956508 | None:intergenic | 35.0% | |
| TCGTGATAAACTAAGAAGCA+TGG | + | chr3_2:80956508-80956527 | Msa0429520:intron | 35.0% | |
| ! | CGTGATAAACTAAGAAGCAT+GGG | + | chr3_2:80956509-80956528 | Msa0429520:intron | 35.0% |
| AGCAAAGGCTTCTCTTAAAT+AGG | + | chr3_2:80956543-80956562 | Msa0429520:intron | 35.0% | |
| ! | GATTATAACATTTGTTGGGG+GGG | + | chr3_2:80956584-80956603 | Msa0429520:intron | 35.0% |
| ! | ATTATAACATTTGTTGGGGG+GGG | + | chr3_2:80956585-80956604 | Msa0429520:intron | 35.0% |
| AGCCTAGTTACATCAACAAA+AGG | - | chr3_2:80956745-80956764 | None:intergenic | 35.0% | |
| GGGGAAACATATATGAACTA+AGG | - | chr3_2:80956802-80956821 | None:intergenic | 35.0% | |
| CATATATGTTTCCCCGATAT+TGG | + | chr3_2:80956807-80956826 | Msa0429520:intron | 35.0% | |
| TTTGAACCAAACCAATATCG+GGG | - | chr3_2:80956821-80956840 | None:intergenic | 35.0% | |
| CTTTGAACCAAACCAATATC+GGG | - | chr3_2:80956822-80956841 | None:intergenic | 35.0% | |
| CATCAAAAGAATTATGCGTC+TGG | - | chr3_2:80956870-80956889 | None:intergenic | 35.0% | |
| ! | GCATAATTCTTTTGATGTCG+AGG | + | chr3_2:80956873-80956892 | Msa0429520:intron | 35.0% |
| GCAAGAATATGATAGGGATT+AGG | + | chr3_2:80956928-80956947 | Msa0429520:intron | 35.0% | |
| ! | TAGCGTAAACCTACTACTTT+TGG | + | chr3_2:80957264-80957283 | Msa0429520:intron | 35.0% |
| AAGGAACTCCTAAAAACTCA+GGG | - | chr3_2:80957393-80957412 | None:intergenic | 35.0% | |
| GGGGAAACATATATGAACTA+AGG | - | chr3_2:80956802-80956821 | None:intergenic | 35.0% | |
| ! | ATGTTTCCCCAATATTGGTT+TGG | + | chr3_2:80957456-80957475 | Msa0429520:intron | 35.0% |
| CAGGATACAATGAGTAAGAA+TGG | - | chr3_2:80957598-80957617 | None:intergenic | 35.0% | |
| ACTCATTGTATCCTGAATTC+TGG | + | chr3_2:80957603-80957622 | Msa0429520:intron | 35.0% | |
| CTCTTTAACTACCAGAATTC+AGG | - | chr3_2:80957617-80957636 | None:intergenic | 35.0% | |
| ! | CCGTTGACAATCATGAATTT+TGG | + | chr3_2:80957923-80957942 | Msa0429520:CDS | 35.0% |
| CATGTAGTATACCAAACATG+AGG | + | chr3_2:80958034-80958053 | Msa0429520:three_prime_UTR | 35.0% | |
| ! | TACTTCCTTAGTCTAGTTTG+TGG | + | chr3_2:80958116-80958135 | Msa0429520:three_prime_UTR | 35.0% |
| !!! | GAGCTGTTTTAGTATTGTGA+TGG | + | chr3_2:80958138-80958157 | Msa0429520:three_prime_UTR | 35.0% |
| ! | CATTCGTTGTTACTTGTTTC+TGG | + | chr3_2:80958166-80958185 | Msa0429520:three_prime_UTR | 35.0% |
| !! | TCGATCGATTTGTTGTAAGT+TGG | + | chr3_2:80958242-80958261 | Msa0429520:three_prime_UTR | 35.0% |
| AAATGCCAATAGGTTCCTTC+AGG | + | chr3_2:80953275-80953294 | Msa0429520:five_prime_UTR | 40.0% | |
| AATGCCAATAGGTTCCTTCA+GGG | + | chr3_2:80953276-80953295 | Msa0429520:five_prime_UTR | 40.0% | |
| CTGAAACGTGAATACGTGAA+TGG | - | chr3_2:80953499-80953518 | None:intergenic | 40.0% | |
| !! | ATTGTTGACTTGAGGAGGAT+CGG | - | chr3_2:80953580-80953599 | None:intergenic | 40.0% |
| !! | CTCATATTGTTGACTTGAGG+AGG | - | chr3_2:80953585-80953604 | None:intergenic | 40.0% |
| !! | CTGCTCATATTGTTGACTTG+AGG | - | chr3_2:80953588-80953607 | None:intergenic | 40.0% |
| CAAGTCAACAATATGAGCAG+TGG | + | chr3_2:80953588-80953607 | Msa0429520:exon | 40.0% | |
| TGAACATGAGGTTGAACTTG+AGG | - | chr3_2:80953627-80953646 | None:intergenic | 40.0% | |
| AGAGTGAGAATCAGAGTCTT+GGG | - | chr3_2:80953697-80953716 | None:intergenic | 40.0% | |
| ! | TTTAGGATACGGAGCGTAAT+CGG | - | chr3_2:80953727-80953746 | None:intergenic | 40.0% |
| ! | TTTGGGTCGAGTTTAGGATA+CGG | - | chr3_2:80953738-80953757 | None:intergenic | 40.0% |
| !! | GATTCGGTGAAAGATGTTCT+TGG | + | chr3_2:80953984-80954003 | Msa0429520:CDS | 40.0% |
| AAGATCTTGCTGGAAACATG+TGG | + | chr3_2:80954048-80954067 | Msa0429520:CDS | 40.0% | |
| TTACTTTGTATGTGCATGGC+TGG | + | chr3_2:80954227-80954246 | Msa0429520:intron | 40.0% | |
| TACTTTGTATGTGCATGGCT+GGG | + | chr3_2:80954228-80954247 | Msa0429520:intron | 40.0% | |
| AAGATAGAGGCCAATTAGAG+AGG | + | chr3_2:80954291-80954310 | Msa0429520:intron | 40.0% | |
| GCAAACACATCCTCTCTAAT+TGG | - | chr3_2:80954304-80954323 | None:intergenic | 40.0% | |
| AGAGGATGTGTTTGCATTTC+TGG | + | chr3_2:80954309-80954328 | Msa0429520:intron | 40.0% | |
| ! | GTTGTATGTGAAGGAAGTGT+TGG | + | chr3_2:80954391-80954410 | Msa0429520:intron | 40.0% |
| AAATAAGCGTAGCAGAGATG+AGG | + | chr3_2:80954439-80954458 | Msa0429520:intron | 40.0% | |
| AGGATCATGTGTTCAATGTG+TGG | + | chr3_2:80954459-80954478 | Msa0429520:intron | 40.0% | |
| AGATGCTAGAAACTAGGCTT+AGG | + | chr3_2:80954538-80954557 | Msa0429520:intron | 40.0% | |
| !! | AATGTCTTAAAAAGTGCCCC+GGG | + | chr3_2:80954993-80955012 | Msa0429520:intron | 40.0% |
| !!! | AACTTTTGAGACTGTACCAG+AGG | + | chr3_2:80955238-80955257 | Msa0429520:CDS | 40.0% |
| AAATACAAGACTCCCATGAC+AGG | - | chr3_2:80955311-80955330 | None:intergenic | 40.0% | |
| AACAAAGCGGTAACAAGCAA+AGG | - | chr3_2:80955433-80955452 | None:intergenic | 40.0% | |
| AATTTCCGGGACACAAATTG+GGG | - | chr3_2:80955617-80955636 | None:intergenic | 40.0% | |
| TTGTGTCCCGGAAATTTAGT+TGG | + | chr3_2:80955621-80955640 | Msa0429520:intron | 40.0% | |
| AAAATCACACTCTCTTCCCT+TGG | + | chr3_2:80955667-80955686 | Msa0429520:intron | 40.0% | |
| GCTGGTGATATTAGTCGTTA+AGG | - | chr3_2:80955718-80955737 | None:intergenic | 40.0% | |
| !!! | CGACACTCATTTTGAAATGG+AGG | - | chr3_2:80955843-80955862 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr3_2:80955947-80955966 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr3_2:80956085-80956104 | Msa0429520:intron | 40.0% |
| CATGCAAGACTACCGTAAAA+GGG | - | chr3_2:80956172-80956191 | None:intergenic | 40.0% | |
| ACATGCAAGACTACCGTAAA+AGG | - | chr3_2:80956173-80956192 | None:intergenic | 40.0% | |
| TGGTAGAGAAAGACTGTACA+AGG | - | chr3_2:80956444-80956463 | None:intergenic | 40.0% | |
| ! | TTATAACATTTGTTGGGGGG+GGG | + | chr3_2:80956586-80956605 | Msa0429520:intron | 40.0% |
| ! | ATGTTTCCCCGATATTGGTT+TGG | + | chr3_2:80956812-80956831 | Msa0429520:intron | 40.0% |
| TAGGGAAATGCTAAAGAGTG+CGG | + | chr3_2:80957146-80957165 | Msa0429520:intron | 40.0% | |
| CAGCCTAGTTACATCAACAA+AGG | - | chr3_2:80956746-80956765 | None:intergenic | 40.0% | |
| CAAGGAACTCCTAAAAACTC+AGG | - | chr3_2:80957394-80957413 | None:intergenic | 40.0% | |
| GAATTTGAGAGAGAGATGCA+AGG | - | chr3_2:80957412-80957431 | None:intergenic | 40.0% | |
| ! | ATGTTGAGGGTATAAAGGAG+TGG | + | chr3_2:80957531-80957550 | Msa0429520:intron | 40.0% |
| AAAGGAGTGGAAGCTAACTA+AGG | + | chr3_2:80957544-80957563 | Msa0429520:intron | 40.0% | |
| GACTACACTTATATGGTGTG+TGG | + | chr3_2:80957711-80957730 | Msa0429520:intron | 40.0% | |
| ATCAACACAGACCTCATGTT+TGG | - | chr3_2:80958048-80958067 | None:intergenic | 40.0% | |
| CTAACCCTGAAGGAACCTAT+TGG | - | chr3_2:80953283-80953302 | None:intergenic | 45.0% | |
| ATAGGTTCCTTCAGGGTTAG+AGG | + | chr3_2:80953283-80953302 | Msa0429520:five_prime_UTR | 45.0% | |
| TTCCTTCAGGGTTAGAGGTT+AGG | + | chr3_2:80953288-80953307 | Msa0429520:five_prime_UTR | 45.0% | |
| AACCTAACCTCTAACCCTGA+AGG | - | chr3_2:80953293-80953312 | None:intergenic | 45.0% | |
| TCAGGGTTAGAGGTTAGGTT+AGG | + | chr3_2:80953293-80953312 | Msa0429520:five_prime_UTR | 45.0% | |
| GTCAACAATATGAGCAGTGG+TGG | + | chr3_2:80953591-80953610 | Msa0429520:exon | 45.0% | |
| ACATGAGGTTGAACTTGAGG+AGG | - | chr3_2:80953624-80953643 | None:intergenic | 45.0% | |
| !! | TTGTGTTTGTGTTGGTGGCT+TGG | - | chr3_2:80953659-80953678 | None:intergenic | 45.0% |
| GGTGTTTGTGTTTGTGTTGG+TGG | - | chr3_2:80953664-80953683 | None:intergenic | 45.0% | |
| GAATCAGAGTCTTGGGGTTT+GGG | - | chr3_2:80953690-80953709 | None:intergenic | 45.0% | |
| AGAATCAGAGTCTTGGGGTT+TGG | - | chr3_2:80953691-80953710 | None:intergenic | 45.0% | |
| GAGTGAGAATCAGAGTCTTG+GGG | - | chr3_2:80953696-80953715 | None:intergenic | 45.0% | |
| GAGAGTGAGAATCAGAGTCT+TGG | - | chr3_2:80953698-80953717 | None:intergenic | 45.0% | |
| TTAGGATACGGAGCGTAATC+GGG | - | chr3_2:80953726-80953745 | None:intergenic | 45.0% | |
| ACATAGGGATTAGATTCGGC+GGG | - | chr3_2:80953828-80953847 | None:intergenic | 45.0% | |
| GACATAGGGATTAGATTCGG+CGG | - | chr3_2:80953829-80953848 | None:intergenic | 45.0% | |
| ! | ACTCTTAGCAGAAGTGGGTT+CGG | - | chr3_2:80953868-80953887 | None:intergenic | 45.0% |
| AGCAAGATCTTCAGCCTTCT+TGG | - | chr3_2:80954039-80954058 | None:intergenic | 45.0% | |
| AAGAAGGCTGAAGATCTTGC+TGG | + | chr3_2:80954038-80954057 | Msa0429520:CDS | 45.0% | |
| ACTTTGTATGTGCATGGCTG+GGG | + | chr3_2:80954229-80954248 | Msa0429520:intron | 45.0% | |
| ACCTGCGATGTTGTATGTGA+AGG | + | chr3_2:80954382-80954401 | Msa0429520:intron | 45.0% | |
| TCCTTCACATACAACATCGC+AGG | - | chr3_2:80954386-80954405 | None:intergenic | 45.0% | |
| GAAACTAGGCTTAGGTGCTT+TGG | + | chr3_2:80954546-80954565 | Msa0429520:intron | 45.0% | |
| GCATTCAAAACGCTAGAGAG+AGG | + | chr3_2:80954632-80954651 | Msa0429520:intron | 45.0% | |
| ATTAAGTGGGGTAGGCTACA+TGG | - | chr3_2:80954763-80954782 | None:intergenic | 45.0% | |
| TGTAGCCTACCCCACTTAAT+TGG | + | chr3_2:80954763-80954782 | Msa0429520:intron | 45.0% | |
| !! | AAATCCTTAAAGAGTGCCCC+GGG | - | chr3_2:80954884-80954903 | None:intergenic | 45.0% |
| !! | GAAATCCTTAAAGAGTGCCC+CGG | - | chr3_2:80954885-80954904 | None:intergenic | 45.0% |
| !! | ATGTCTTAAAAAGTGCCCCG+GGG | + | chr3_2:80954994-80955013 | Msa0429520:intron | 45.0% |
| ACAGCAGCATCAGCAAAACT+AGG | - | chr3_2:80955155-80955174 | None:intergenic | 45.0% | |
| !! | TAGTTTTGCTGATGCTGCTG+TGG | + | chr3_2:80955154-80955173 | Msa0429520:CDS | 45.0% |
| ! | AGTTTTGCTGATGCTGCTGT+GGG | + | chr3_2:80955155-80955174 | Msa0429520:CDS | 45.0% |
| TGCTCAGGGAACAAAAGTTC+TGG | + | chr3_2:80955184-80955203 | Msa0429520:CDS | 45.0% | |
| ! | GGAACAAAAGTTCTGGCAGA+AGG | + | chr3_2:80955191-80955210 | Msa0429520:CDS | 45.0% |
| ! | ACAAAAGTTCTGGCAGAAGG+TGG | + | chr3_2:80955194-80955213 | Msa0429520:CDS | 45.0% |
| AACCCACTTTCTTACCAGAC+TGG | + | chr3_2:80955362-80955381 | Msa0429520:CDS | 45.0% | |
| CACCAGTCTGGTAAGAAAGT+GGG | - | chr3_2:80955367-80955386 | None:intergenic | 45.0% | |
| TCACCAGTCTGGTAAGAAAG+TGG | - | chr3_2:80955368-80955387 | None:intergenic | 45.0% | |
| TAAACCCCCAATTTGTGTCC+CGG | + | chr3_2:80955609-80955628 | Msa0429520:intron | 45.0% | |
| ATTTCCGGGACACAAATTGG+GGG | - | chr3_2:80955616-80955635 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr3_2:80956084-80956103 | Msa0429520:intron | 45.0% |
| !! | ACGGAGGGAGTATCATTGTT+TGG | + | chr3_2:80956100-80956119 | Msa0429520:intron | 45.0% |
| TGCATGTTACCTATGAACCC+AGG | + | chr3_2:80956186-80956205 | Msa0429520:intron | 45.0% | |
| ! | TTTGGAGTACCTGGGTTCAT+AGG | - | chr3_2:80956198-80956217 | None:intergenic | 45.0% |
| TGGGCAACTGAATAGAGCAA+AGG | + | chr3_2:80956528-80956547 | Msa0429520:intron | 45.0% | |
| AACAAGTGCCCTAAGGGTTA+GGG | - | chr3_2:80956700-80956719 | None:intergenic | 45.0% | |
| TAACAAGTGCCCTAAGGGTT+AGG | - | chr3_2:80956701-80956720 | None:intergenic | 45.0% | |
| CATGCTAACAAGTGCCCTAA+GGG | - | chr3_2:80956706-80956725 | None:intergenic | 45.0% | |
| TCATGCTAACAAGTGCCCTA+AGG | - | chr3_2:80956707-80956726 | None:intergenic | 45.0% | |
| ATTCTTGCAAGATGTGTGCG+AGG | + | chr3_2:80956905-80956924 | Msa0429520:intron | 45.0% | |
| TTCTTGCAAGATGTGTGCGA+GGG | + | chr3_2:80956906-80956925 | Msa0429520:intron | 45.0% | |
| TGCGAGGGCAAGAATATGAT+AGG | + | chr3_2:80956921-80956940 | Msa0429520:intron | 45.0% | |
| GCGAGGGCAAGAATATGATA+GGG | + | chr3_2:80956922-80956941 | Msa0429520:intron | 45.0% | |
| TAACAAGTGCCCTAAGGGTT+GGG | - | chr3_2:80956701-80956720 | None:intergenic | 45.0% | |
| CATGCTAACAAGTGCCCTAA+GGG | - | chr3_2:80956706-80956725 | None:intergenic | 45.0% | |
| TCATGCTAACAAGTGCCCTA+AGG | - | chr3_2:80956707-80956726 | None:intergenic | 45.0% | |
| ! | AGCTCAAGCCCTGAGTTTTT+AGG | + | chr3_2:80956772-80956791 | Msa0429520:intron | 45.0% |
| GAGTGGAAGCTAACTAAGGT+GGG | + | chr3_2:80957548-80957567 | Msa0429520:intron | 45.0% | |
| CAGCTCCACAAACTAGACTA+AGG | - | chr3_2:80958124-80958143 | None:intergenic | 45.0% | |
| !!! | CTTTTTTTTATTTTAAATTA+AGG | - | chr3_2:80953323-80953342 | None:intergenic | 5.0% |
| !! | CTATAAAATTAATTAAAATA+GGG | - | chr3_2:80955036-80955055 | None:intergenic | 5.0% |
| !!! | ATATTTTTATAAATATTGAT+TGG | + | chr3_2:80956988-80957007 | Msa0429520:intron | 5.0% |
| TGGACTTGGGCTTGAACATG+AGG | - | chr3_2:80953639-80953658 | None:intergenic | 50.0% | |
| !! | TGTGTTGGTGGCTTGGACTT+GGG | - | chr3_2:80953652-80953671 | None:intergenic | 50.0% |
| !! | TTGTGTTGGTGGCTTGGACT+TGG | - | chr3_2:80953653-80953672 | None:intergenic | 50.0% |
| ! | AGAGTCTTGGGGTTTGGGAT+TGG | - | chr3_2:80953685-80953704 | None:intergenic | 50.0% |
| TAGGATACGGAGCGTAATCG+GGG | - | chr3_2:80953725-80953744 | None:intergenic | 50.0% | |
| ACGTCGTTTGGGTCGAGTTT+AGG | - | chr3_2:80953744-80953763 | None:intergenic | 50.0% | |
| GATTCAGTAGCAACAGGTGG+TGG | - | chr3_2:80953777-80953796 | None:intergenic | 50.0% | |
| CGAGATTCAGTAGCAACAGG+TGG | - | chr3_2:80953780-80953799 | None:intergenic | 50.0% | |
| ACTGGTGCAGGAGAGACATA+GGG | - | chr3_2:80953843-80953862 | None:intergenic | 50.0% | |
| AACTGGTGCAGGAGAGACAT+AGG | - | chr3_2:80953844-80953863 | None:intergenic | 50.0% | |
| ! | CTCTTAGCAGAAGTGGGTTC+GGG | - | chr3_2:80953867-80953886 | None:intergenic | 50.0% |
| AGCTGCTGAAGCTACCAAGA+AGG | + | chr3_2:80954022-80954041 | Msa0429520:CDS | 50.0% | |
| ACTAGGCTTAGGTGCTTTGG+AGG | + | chr3_2:80954549-80954568 | Msa0429520:intron | 50.0% | |
| ! | GTCTTGTTAACGAGTACCCC+CGG | + | chr3_2:80954863-80954882 | Msa0429520:intron | 50.0% |
| TCTTGTTAACGAGTACCCCC+GGG | + | chr3_2:80954864-80954883 | Msa0429520:intron | 50.0% | |
| !! | AATCCTTAAAGAGTGCCCCG+GGG | - | chr3_2:80954883-80954902 | None:intergenic | 50.0% |
| !! | TGTCTTAAAAAGTGCCCCGG+GGG | + | chr3_2:80954995-80955014 | Msa0429520:intron | 50.0% |
| TGCTGTGGGAAGAATTGCTC+AGG | + | chr3_2:80955169-80955188 | Msa0429520:CDS | 50.0% | |
| GCTGTGGGAAGAATTGCTCA+GGG | + | chr3_2:80955170-80955189 | Msa0429520:CDS | 50.0% | |
| ATTGAGTCTGGTCACCAGTC+TGG | - | chr3_2:80955379-80955398 | None:intergenic | 50.0% | |
| AGACTGGTGACCAGACTCAA+TGG | + | chr3_2:80955378-80955397 | Msa0429520:CDS | 50.0% | |
| !! | AGACTGTACAAGGAGCACTG+AGG | - | chr3_2:80956434-80956453 | None:intergenic | 50.0% |
| ACAAGTGCCCTAAGGGTTAG+GGG | - | chr3_2:80956699-80956718 | None:intergenic | 50.0% | |
| ! | TGCTAAAGAGTGCGGAGCAT+TGG | + | chr3_2:80957154-80957173 | Msa0429520:intron | 50.0% |
| CTAACAAGTGCCCTAAGGGT+TGG | - | chr3_2:80956702-80956721 | None:intergenic | 50.0% | |
| GGAGTGGAAGCTAACTAAGG+TGG | + | chr3_2:80957547-80957566 | Msa0429520:intron | 50.0% | |
| !! | GGTTGGCTTTGCTTGTGGAT+GGG | - | chr3_2:80957876-80957895 | None:intergenic | 50.0% |
| !! | AGTAGGGTTGGCTTTGCTTG+TGG | - | chr3_2:80957881-80957900 | None:intergenic | 50.0% |
| GCAGTCTCGCTGATACACTA+TGG | + | chr3_2:80957999-80958018 | Msa0429520:exon | 50.0% | |
| AGGATACGGAGCGTAATCGG+GGG | - | chr3_2:80953724-80953743 | None:intergenic | 55.0% | |
| ! | TCAGTAGCAACAGGTGGTGG+TGG | - | chr3_2:80953774-80953793 | None:intergenic | 55.0% |
| GCGCGAGATTCAGTAGCAAC+AGG | - | chr3_2:80953783-80953802 | None:intergenic | 55.0% | |
| ATTAGATTCGGCGGGCATGG+TGG | - | chr3_2:80953820-80953839 | None:intergenic | 55.0% | |
| !! | GGCTTAGGTGCTTTGGAGGT+TGG | + | chr3_2:80954553-80954572 | Msa0429520:intron | 55.0% |
| CTTGTTAACGAGTACCCCCG+GGG | + | chr3_2:80954865-80954884 | Msa0429520:intron | 55.0% | |
| !! | ATCCTTAAAGAGTGCCCCGG+GGG | - | chr3_2:80954882-80954901 | None:intergenic | 55.0% |
| AAATGTTAACCGGTGCCCCC+GGG | - | chr3_2:80955013-80955032 | None:intergenic | 55.0% | |
| GAAATGTTAACCGGTGCCCC+CGG | - | chr3_2:80955014-80955033 | None:intergenic | 55.0% | |
| ACCTCTGCTGGACCTGTCAT+GGG | + | chr3_2:80955296-80955315 | Msa0429520:CDS | 55.0% | |
| ! | GGGGCTTAGGGCACTTGTTA+AGG | - | chr3_2:80956680-80956699 | None:intergenic | 55.0% |
| CCCTAAGGGTTAGGGGCTTA+GGG | - | chr3_2:80956692-80956711 | None:intergenic | 55.0% | |
| CCCTAAGCCCCTAACCCTTA+GGG | + | chr3_2:80956689-80956708 | Msa0429520:intron | 55.0% | |
| ACTGCTCGCAGCTGATGCAA+TGG | - | chr3_2:80957850-80957869 | None:intergenic | 55.0% | |
| !! | GGGTTGGCTTTGCTTGTGGA+TGG | - | chr3_2:80957877-80957896 | None:intergenic | 55.0% |
| ! | GTGGTGGTGCGACGTCGTTT+GGG | - | chr3_2:80953755-80953774 | None:intergenic | 60.0% |
| !! | GTAGCAACAGGTGGTGGTGG+TGG | - | chr3_2:80953771-80953790 | None:intergenic | 60.0% |
| GGGATTAGATTCGGCGGGCA+TGG | - | chr3_2:80953823-80953842 | None:intergenic | 60.0% | |
| ! | GCAGAAGTGGGTTCGGGAAC+TGG | - | chr3_2:80953861-80953880 | None:intergenic | 60.0% |
| ! | TACCCCCGGGGCACTCTTTA+AGG | + | chr3_2:80954877-80954896 | Msa0429520:intron | 60.0% |
| AATGTTAACCGGTGCCCCCG+GGG | - | chr3_2:80955012-80955031 | None:intergenic | 60.0% | |
| TGCTACCTCTCCACCTCTGC+TGG | + | chr3_2:80955284-80955303 | Msa0429520:CDS | 60.0% | |
| CATGACAGGTCCAGCAGAGG+TGG | - | chr3_2:80955297-80955316 | None:intergenic | 60.0% | |
| CACCTCTGCTGGACCTGTCA+TGG | + | chr3_2:80955295-80955314 | Msa0429520:CDS | 60.0% | |
| TCCCATGACAGGTCCAGCAG+AGG | - | chr3_2:80955300-80955319 | None:intergenic | 60.0% | |
| GCCCTAAGCCCCTAACCCTT+AGG | + | chr3_2:80956688-80956707 | Msa0429520:intron | 60.0% | |
| GCCCTAAGGGTTAGGGGCTT+AGG | - | chr3_2:80956693-80956712 | None:intergenic | 60.0% | |
| ! | TGGGCGTAGGGCGCTTGTTA+AGG | - | chr3_2:80957293-80957312 | None:intergenic | 60.0% |
| TGCCCTAAGGGTTGGGCGTA+GGG | - | chr3_2:80957305-80957324 | None:intergenic | 60.0% | |
| ! | GGTGGTGGTGCGACGTCGTT+TGG | - | chr3_2:80953756-80953775 | None:intergenic | 65.0% |
| !! | CATGGTGGTGGCAGCATCGG+TGG | - | chr3_2:80953805-80953824 | None:intergenic | 65.0% |
| !! | GGGCATGGTGGTGGCAGCAT+CGG | - | chr3_2:80953808-80953827 | None:intergenic | 65.0% |
| AGATTCGGCGGGCATGGTGG+TGG | - | chr3_2:80953817-80953836 | None:intergenic | 65.0% | |
| GTGGGTTCGGGAACTGGTGC+AGG | - | chr3_2:80953855-80953874 | None:intergenic | 65.0% | |
| !! | AAAAAGTGCCCCGGGGGCAC+CGG | + | chr3_2:80955001-80955020 | Msa0429520:intron | 65.0% |
| CAGGTCCAGCAGAGGTGGAG+AGG | - | chr3_2:80955292-80955311 | None:intergenic | 65.0% | |
| CGCCCTACGCCCAACCCTTA+GGG | + | chr3_2:80957300-80957319 | Msa0429520:intron | 65.0% | |
| GTGCCCTAAGGGTTGGGCGT+AGG | - | chr3_2:80957306-80957325 | None:intergenic | 65.0% | |
| GCGCCCTACGCCCAACCCTT+AGG | + | chr3_2:80957299-80957318 | Msa0429520:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 80953255 | 80958317 | 80953255 | ID=Msa0429520;Name=Msa0429520 |
| chr3_2 | mRNA | 80953255 | 80958317 | 80953255 | ID=Msa0429520-mRNA-1;Parent=Msa0429520;Name=Msa0429520-mRNA-1;_AED=0.02;_eAED=0.02;_QI=345|1|1|1|1|1|4|306|277 |
| chr3_2 | exon | 80953255 | 80953885 | 80953255 | ID=Msa0429520-mRNA-1:exon:22240;Parent=Msa0429520-mRNA-1 |
| chr3_2 | exon | 80953976 | 80954077 | 80953976 | ID=Msa0429520-mRNA-1:exon:22241;Parent=Msa0429520-mRNA-1 |
| chr3_2 | exon | 80955141 | 80955412 | 80955141 | ID=Msa0429520-mRNA-1:exon:22242;Parent=Msa0429520-mRNA-1 |
| chr3_2 | exon | 80957838 | 80958317 | 80957838 | ID=Msa0429520-mRNA-1:exon:22243;Parent=Msa0429520-mRNA-1 |
| chr3_2 | five_prime_UTR | 80953255 | 80953599 | 80953255 | ID=Msa0429520-mRNA-1:five_prime_utr;Parent=Msa0429520-mRNA-1 |
| chr3_2 | CDS | 80953600 | 80953885 | 80953600 | ID=Msa0429520-mRNA-1:cds;Parent=Msa0429520-mRNA-1 |
| chr3_2 | CDS | 80953976 | 80954077 | 80953976 | ID=Msa0429520-mRNA-1:cds;Parent=Msa0429520-mRNA-1 |
| chr3_2 | CDS | 80955141 | 80955412 | 80955141 | ID=Msa0429520-mRNA-1:cds;Parent=Msa0429520-mRNA-1 |
| chr3_2 | CDS | 80957838 | 80958011 | 80957838 | ID=Msa0429520-mRNA-1:cds;Parent=Msa0429520-mRNA-1 |
| chr3_2 | three_prime_UTR | 80958012 | 80958317 | 80958012 | ID=Msa0429520-mRNA-1:three_prime_utr;Parent=Msa0429520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
