AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0172350


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0172350 MtrunA17_Chr1g0190771 98.945 379 4 0 1 379 1 379 0.0 787
Msa0172350 MtrunA17_Chr7g0274131 91.005 378 32 2 1 377 1 377 0.0 727
Msa0172350 MtrunA17_Chr4g0067461 28.165 316 208 8 29 340 112 412 2.03e-28 115
Msa0172350 MtrunA17_Chr4g0031131 27.832 309 208 9 28 331 32 330 3.26e-25 104
Msa0172350 MtrunA17_Chr2g0327981 28.662 314 199 11 28 331 38 336 4.69e-25 104
Msa0172350 MtrunA17_Chr1g0195521 25.959 339 223 9 28 347 118 447 1.33e-24 104
Msa0172350 MtrunA17_Chr7g0268991 24.768 323 216 8 29 342 16 320 2.43e-21 93.6
Msa0172350 MtrunA17_Chr1g0182091 28.311 219 150 5 114 331 1 213 2.14e-17 80.5
Msa0172350 MtrunA17_Chr4g0056941 24.340 341 213 11 30 338 95 422 4.68e-15 76.3
Msa0172350 MtrunA17_Chr4g0011281 24.189 339 214 12 28 335 101 427 6.59e-15 75.9
Msa0172350 MtrunA17_Chr5g0398811 24.412 340 212 12 28 335 90 416 2.47e-14 73.9
Msa0172350 MtrunA17_Chr1g0147841 25.688 327 217 14 26 337 3 318 4.49e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0172350 AT5G28840.2 90.981 377 34 0 1 377 1 377 0.0 729
Msa0172350 AT5G28840.1 90.981 377 34 0 1 377 1 377 0.0 729
Msa0172350 AT3G62830.2 27.160 324 222 8 28 347 119 432 2.53e-28 115
Msa0172350 AT3G62830.1 27.160 324 222 8 28 347 119 432 2.53e-28 115
Msa0172350 AT2G47650.1 28.247 308 207 8 28 331 121 418 4.37e-28 114
Msa0172350 AT3G53520.1 27.744 328 222 9 26 348 118 435 4.38e-28 114
Msa0172350 AT2G47650.2 27.707 314 207 9 28 331 121 424 2.21e-26 110
Msa0172350 AT3G53520.2 27.134 328 222 10 26 348 118 433 3.98e-25 106
Msa0172350 AT2G28760.1 28.013 307 206 9 28 329 31 327 7.32e-25 104
Msa0172350 AT2G28760.2 28.013 307 206 9 28 329 31 327 7.32e-25 104
Msa0172350 AT2G28760.3 28.013 307 206 9 28 329 31 327 7.32e-25 104
Msa0172350 AT3G46440.2 27.653 311 202 10 28 329 29 325 8.49e-25 103
Msa0172350 AT3G46440.1 27.653 311 202 10 28 329 29 325 8.49e-25 103
Msa0172350 AT2G28760.4 28.013 307 206 9 28 329 62 358 2.12e-24 103
Msa0172350 AT5G59290.4 27.010 311 204 10 28 329 1 297 4.84e-24 101
Msa0172350 AT5G59290.1 27.010 311 204 10 28 329 30 326 7.29e-24 101
Msa0172350 AT1G73250.1 25.714 315 209 7 29 335 18 315 7.48e-24 100
Msa0172350 AT5G59290.2 27.010 311 204 10 28 329 45 341 9.49e-24 101
Msa0172350 AT5G59290.3 27.010 311 204 10 28 329 23 319 1.51e-23 100
Msa0172350 AT3G53520.4 25.779 353 220 11 26 348 118 458 2.29e-23 101
Msa0172350 AT1G17890.1 25.231 325 216 8 29 344 21 327 3.00e-23 99.4
Msa0172350 AT1G17890.2 25.231 325 216 8 29 344 13 319 3.18e-23 99.4
Msa0172350 AT1G17890.3 25.231 325 216 8 29 344 13 319 3.18e-23 99.4
Msa0172350 AT2G45310.1 26.100 341 205 14 28 335 97 423 8.81e-18 84.7
Msa0172350 AT3G23820.1 24.793 363 220 14 28 351 112 460 3.63e-16 80.1
Msa0172350 AT4G00110.1 24.706 340 211 13 28 335 91 417 4.08e-15 77.0
Msa0172350 AT1G02000.1 23.824 340 214 12 28 335 92 418 6.14e-14 73.2
Msa0172350 AT4G30440.1 23.754 341 213 12 28 335 88 414 1.16e-12 69.3
Msa0172350 AT1G53500.1 24.771 327 220 13 30 341 11 326 1.45e-12 69.7

Find 137 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATGAAGTTCAATGTAAT+TGG 0.238222 1_4:-57368593 Msa0172350:three_prime_UTR
ATTGAAGCTGCTAGGATTAA+TGG 0.256067 1_4:-57370564 Msa0172350:CDS
CATAACATATATGGTCCTTT+TGG 0.258635 1_4:-57370119 Msa0172350:CDS
CTGCCCGAAGTGAGCCTAAT+TGG 0.271744 1_4:+57368907 None:intergenic
TTCCGCGAGCCGGTAAATAT+TGG 0.274622 1_4:-57369431 Msa0172350:CDS
GTTTCTAACTGTTTAAATTC+AGG 0.285374 1_4:+57370379 None:intergenic
GCTTTATATTACAGCTCAAT+AGG 0.299580 1_4:-57368817 Msa0172350:three_prime_UTR
TGAAAATACATTGAGCAATA+AGG 0.303319 1_4:+57368741 None:intergenic
ATCTTGAGAGAGAGCCTTAC+TGG 0.304697 1_4:-57370896 Msa0172350:CDS
AGCAGTGAAGTAAATGTTTC+CGG 0.313113 1_4:-57368850 Msa0172350:three_prime_UTR
ACATATATAGATAGCATAAT+TGG 0.321830 1_4:+57371798 None:intergenic
TTTCAATCTTGCCGCTGATA+TGG 0.324249 1_4:-57370658 Msa0172350:CDS
TAAAGCACTTGTCGGTGCTT+GGG 0.326365 1_4:-57368704 Msa0172350:three_prime_UTR
GAGATGGCTGAGATCGTTCT+TGG 0.352457 1_4:-57369383 Msa0172350:CDS
TATACCTTCAACTTCATTGT+TGG 0.357453 1_4:+57369257 None:intergenic
GCCTAATTGGACCGGTGCTT+GGG 0.360185 1_4:+57368920 None:intergenic
AATTCCATCTTGTTGATCTC+AGG 0.363929 1_4:-57370725 Msa0172350:CDS
AAAATTTCCATCACTGGTGC+TGG 0.368034 1_4:-57370858 Msa0172350:CDS
ATTTACCGGCTCGCGGAAAT+CGG 0.371961 1_4:+57369436 None:intergenic
CAAAAGGACCATATATGTTA+TGG 0.374113 1_4:+57370120 None:intergenic
AAGCACTACAACAAAGATTT+CGG 0.376422 1_4:-57370167 Msa0172350:CDS
TCATCACTTCCAATATTTAC+CGG 0.378878 1_4:+57369422 None:intergenic
AGCCTAATTGGACCGGTGCT+TGG 0.382304 1_4:+57368919 None:intergenic
TTCAATCTTGCCGCTGATAT+GGG 0.385962 1_4:-57370657 Msa0172350:CDS
GATTACATATGTCTGGATTA+AGG 0.386996 1_4:-57369012 Msa0172350:CDS
TTAAAGCACTTGTCGGTGCT+TGG 0.387514 1_4:-57368705 Msa0172350:three_prime_UTR
GGGAGGTTCCATAACATATA+TGG 0.396979 1_4:-57370128 Msa0172350:CDS
ACTGCTTAACGGTTACTAAA+GGG 0.409840 1_4:-57370692 Msa0172350:CDS
TTCTTCTAATCTATATATAT+AGG 0.411751 1_4:+57371735 None:intergenic
TGTCTTTGTGTGGAAGTAGA+TGG 0.413404 1_4:-57371830 Msa0172350:five_prime_UTR
AACTACTAATGTCAGCTTGA+AGG 0.417690 1_4:-57370359 Msa0172350:CDS
TTTCTAACTGTTTAAATTCA+GGG 0.425655 1_4:+57370380 None:intergenic
GGCTGAGGATTACATATGTC+TGG 0.425884 1_4:-57369019 Msa0172350:CDS
ACATTATCATCACATCAATC+AGG 0.432026 1_4:-57371657 Msa0172350:intron
GGGCCAGGAATGTGATGTAT+AGG 0.440229 1_4:+57369341 None:intergenic
AAGCTTAAAATTTCCATCAC+TGG 0.443314 1_4:-57370864 Msa0172350:CDS
CAAAGAGAGTAGTTAATTCA+TGG 0.447053 1_4:-57368877 Msa0172350:exon
ATACATAATAACAGAATGAT+TGG 0.454190 1_4:+57370614 None:intergenic
ATGTATGGAGAGAAGAGGTT+TGG 0.454830 1_4:+57371676 None:intergenic
TTCGGAATTGAGTGCCGCAT+TGG 0.455787 1_4:-57370149 Msa0172350:CDS
CTTTATATTACAGCTCAATA+GGG 0.457105 1_4:-57368816 Msa0172350:three_prime_UTR
TTCATTGATGAGTGTGTTGA+AGG 0.460492 1_4:-57369864 Msa0172350:CDS
TTACGACCACGAACACCCTC+TGG 0.466075 1_4:+57369320 None:intergenic
CCACGAACACCCTCTGGGCC+AGG 0.469580 1_4:+57369326 None:intergenic
GGTCCAATTAGGCTCACTTC+GGG 0.470769 1_4:-57368910 Msa0172350:CDS
TCGGAATTGAGTGCCGCATT+GGG 0.470875 1_4:-57370148 Msa0172350:CDS
CTCTCTCTCAAGATTCTCAT+AGG 0.472504 1_4:+57370905 None:intergenic
AAAGCACTTGTCGGTGCTTG+GGG 0.472833 1_4:-57368703 Msa0172350:three_prime_UTR
AGGTTTGGTTTGAGTTGAGA+AGG 0.473129 1_4:+57371691 None:intergenic
TTCTGCAGGATGGGAAGTAC+TGG 0.475790 1_4:-57370951 Msa0172350:intron
ACTCCTATACATCACATTCC+TGG 0.476449 1_4:-57369344 Msa0172350:CDS
ACCCAAGCACCGGTCCAATT+AGG 0.477394 1_4:-57368921 Msa0172350:CDS
AAATTTCCATCACTGGTGCT+GGG 0.477839 1_4:-57370857 Msa0172350:CDS
AACTGCTTAACGGTTACTAA+AGG 0.478063 1_4:-57370693 Msa0172350:CDS
CTAGGATTAATGGAATTAAG+AGG 0.478585 1_4:-57370554 Msa0172350:intron
CACGTTATTTATGCGTAGAT+CGG 0.479941 1_4:-57368767 Msa0172350:three_prime_UTR
ATATAAAGCACACTCTTCTC+CGG 0.481376 1_4:+57368831 None:intergenic
GCCGCTGATATGGGTGGAAT+GGG 0.482360 1_4:-57370648 Msa0172350:CDS
CCTGGCCCAGAGGGTGTTCG+TGG 0.486762 1_4:-57369326 Msa0172350:CDS
GCTGAAATAATAAATATATC+CGG 0.489403 1_4:+57368526 None:intergenic
GTTTGAGTTGAGAAGGCAAT+TGG 0.493292 1_4:+57371698 None:intergenic
AAATTTGAGATGTGGGGAGA+TGG 0.493691 1_4:-57369909 Msa0172350:CDS
TGCCGCTGATATGGGTGGAA+TGG 0.494921 1_4:-57370649 Msa0172350:CDS
GGTCATGGATAACTGCTTAA+CGG 0.498357 1_4:-57370703 Msa0172350:CDS
TAAATCCGATTTCCGCGAGC+CGG 0.501210 1_4:-57369441 Msa0172350:CDS
GATATTAGTGTATGTAGTGC+CGG 0.507850 1_4:-57368545 Msa0172350:three_prime_UTR
TACAGACAAATTTGAGATGT+GGG 0.508195 1_4:-57369916 Msa0172350:CDS
GGCTCCAACAATGAAGTTGA+AGG 0.508928 1_4:-57369261 Msa0172350:intron
ATTACATTATTGCTTCTGAC+TGG 0.512162 1_4:-57370788 Msa0172350:CDS
GATTAAGGAACAACTTGAAA+GGG 0.521122 1_4:-57368997 Msa0172350:CDS
TGAGTTGAGAAGGCAATTGG+TGG 0.526061 1_4:+57371701 None:intergenic
CGGTCCAATTAGGCTCACTT+CGG 0.527001 1_4:-57368911 Msa0172350:CDS
GCTCAAGGTCTTGATACATC+AGG 0.527626 1_4:-57368969 Msa0172350:CDS
TGAAATTGATACTTGAACAG+AGG 0.529012 1_4:+57368432 None:intergenic
ATACCTTTCCATGTTCCAAA+AGG 0.529802 1_4:+57370104 None:intergenic
AATCGCGAACAAACCTCAGC+AGG 0.536092 1_4:+57370322 None:intergenic
TAATAAAAGAGAAACTTGGC+TGG 0.537272 1_4:-57369283 Msa0172350:CDS
TCTATATATATAGGACGAGA+AGG 0.537392 1_4:+57371744 None:intergenic
TGCTTTGTCATACAGGTGGA+AGG 0.539745 1_4:-57369980 Msa0172350:intron
CAGCGGCAAGATTGAAAACA+TGG 0.540286 1_4:+57370664 None:intergenic
ATTGATGTGATGATAATGTA+TGG 0.541937 1_4:+57371661 None:intergenic
AATTTCCATCACTGGTGCTG+GGG 0.543928 1_4:-57370856 Msa0172350:CDS
TCTTGTTGATCTCAGGGTCA+TGG 0.544557 1_4:-57370718 Msa0172350:CDS
ATTCCATCTTGTTGATCTCA+GGG 0.549458 1_4:-57370724 Msa0172350:CDS
CTGCTTAACGGTTACTAAAG+GGG 0.550109 1_4:-57370691 Msa0172350:CDS
TTCAACACACTCATCAATGA+AGG 0.550166 1_4:+57369866 None:intergenic
GTTTAGCCACAAGATGCGTA+TGG 0.550376 1_4:-57370221 Msa0172350:intron
CTTAGCGCGGCGTCTCAAGA+AGG 0.553238 1_4:-57370817 Msa0172350:CDS
GGCTCACTTCGGGCAGCAGA+CGG 0.553347 1_4:-57368900 Msa0172350:CDS
TCAATATGATTGAAGCTGCT+AGG 0.554345 1_4:-57370572 Msa0172350:CDS
CGAAGTGAGCCTAATTGGAC+CGG 0.556358 1_4:+57368912 None:intergenic
TGGTATTGTAGGATGGGCTG+AGG 0.562487 1_4:-57369034 Msa0172350:intron
TCATACAGGTGGAAGGGAGA+AGG 0.564053 1_4:-57369973 Msa0172350:intron
GCTCAATAGGGTCGATGTCA+TGG 0.565109 1_4:-57368804 Msa0172350:three_prime_UTR
GGATTAAGGAACAACTTGAA+AGG 0.565415 1_4:-57368998 Msa0172350:CDS
GTCTGATGCATGGCCTGCTG+AGG 0.565899 1_4:-57370335 Msa0172350:intron
ATTTCCATCACTGGTGCTGG+GGG 0.574182 1_4:-57370855 Msa0172350:CDS
GGTCTTGATACATCAGGATA+CGG 0.574577 1_4:-57368963 Msa0172350:CDS
GAAATTGATACTTGAACAGA+GGG 0.577472 1_4:+57368433 None:intergenic
CACAACTGTGGAAGTAACAA+TGG 0.578205 1_4:+57368473 None:intergenic
CTTGAAAGGGAGAAGGCTCA+AGG 0.580968 1_4:-57368984 Msa0172350:CDS
GCTAGAGAAGCTTGCAACAG+AGG 0.582464 1_4:-57370198 Msa0172350:CDS
GAATTGAGTGCCGCATTGGG+AGG 0.584070 1_4:-57370145 Msa0172350:CDS
ACACTAATAAAAGAGAAACT+TGG 0.584612 1_4:-57369287 Msa0172350:CDS
AGTGTGTTGAAGGTGTACTT+AGG 0.590072 1_4:-57369854 Msa0172350:intron
ATGAAAAGCTTGTCTTTGTG+TGG 0.590202 1_4:-57371840 Msa0172350:five_prime_UTR
AGGATACGGCTCATCAAAAG+TGG 0.590362 1_4:-57368949 Msa0172350:CDS
TTATCGCGTCGCACTTAGCG+CGG 0.590377 1_4:-57370830 Msa0172350:CDS
AATCTTGCCGCTGATATGGG+TGG 0.591075 1_4:-57370654 Msa0172350:CDS
AGCGCGGCGTCTCAAGAAGG+AGG 0.592364 1_4:-57370814 Msa0172350:CDS
CATCACATTCCTGGCCCAGA+GGG 0.594287 1_4:-57369335 Msa0172350:CDS
TTCCAATATTTACCGGCTCG+CGG 0.595261 1_4:+57369429 None:intergenic
TGACCCTGAGATCAACAAGA+TGG 0.595396 1_4:+57370721 None:intergenic
TTTAGCCACAAGATGCGTAT+GGG 0.596572 1_4:-57370220 Msa0172350:intron
CTACAGACAAATTTGAGATG+TGG 0.598727 1_4:-57369917 Msa0172350:CDS
ATATATAGGACGAGAAGGGA+AGG 0.599216 1_4:+57371749 None:intergenic
AATAAAAGAGAAACTTGGCT+GGG 0.602593 1_4:-57369282 Msa0172350:CDS
GCTTTGTCATACAGGTGGAA+GGG 0.602719 1_4:-57369979 Msa0172350:intron
TACGACCACGAACACCCTCT+GGG 0.602751 1_4:+57369321 None:intergenic
AAGCACTTGTCGGTGCTTGG+GGG 0.603889 1_4:-57368702 Msa0172350:three_prime_UTR
ATTGAACTTCATAAATCATG+AGG 0.605744 1_4:+57368601 None:intergenic
CTAGCAAAATAACGAACAAG+TGG 0.606439 1_4:-57371772 Msa0172350:five_prime_UTR
AGTGGTGCAAACCCAAGCAC+CGG 0.611968 1_4:-57368931 Msa0172350:CDS
AAATATTGGAAGTGATGAGA+TGG 0.614662 1_4:-57369417 Msa0172350:CDS
CTATATATATAGGACGAGAA+GGG 0.614804 1_4:+57371745 None:intergenic
TCTAGCCCATACGCATCTTG+TGG 0.616959 1_4:+57370215 None:intergenic
GGAACAACTTGAAAGGGAGA+AGG 0.619660 1_4:-57368991 Msa0172350:CDS
TATCTAAAATCACACAACTG+TGG 0.645712 1_4:+57368461 None:intergenic
GCTTGAAGGAGTCTGATGCA+TGG 0.646402 1_4:-57370345 Msa0172350:CDS
TGATAATGTATGGAGAGAAG+AGG 0.646893 1_4:+57371671 None:intergenic
ACCCATTCCACCCATATCAG+CGG 0.650854 1_4:+57370647 None:intergenic
GCGCGGCGTCTCAAGAAGGA+GGG 0.659404 1_4:-57370813 Msa0172350:CDS
ACAGACAAATTTGAGATGTG+GGG 0.667327 1_4:-57369915 Msa0172350:CDS
ACATCACATTCCTGGCCCAG+AGG 0.671457 1_4:-57369336 Msa0172350:CDS
AGGGTAGATACAAGCACTTG+AGG 0.678133 1_4:+57370399 None:intergenic
GATGGTCAGCATGAATGAGA+TGG 0.684833 1_4:-57369399 Msa0172350:CDS
TGTTATGGAACCTCCCAATG+CGG 0.724863 1_4:+57370135 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCTTCTAATCTATATATAT+AGG + chr1_4:57368557-57368576 None:intergenic 15.0%
!! TAATTAAAAAAGAGAAATTG+AGG + chr1_4:57368664-57368683 None:intergenic 15.0%
!! TATTATCGATAATAATATTG+CGG - chr1_4:57368737-57368756 Msa0172350:three_prime_UTR 15.0%
!!! CAATTTTTTGACTAAAATTT+TGG + chr1_4:57368978-57368997 None:intergenic 15.0%
!! ATGAAAAAATTAATTCACTA+TGG + chr1_4:57369189-57369208 None:intergenic 15.0%
!!! TTTATTTTTACATTAAGCTT+GGG - chr1_4:57370019-57370038 Msa0172350:intron 15.0%
!!! TTAGTAGATGTTTTTAATTT+TGG - chr1_4:57370260-57370279 Msa0172350:intron 15.0%
!!! TAATAAGTTTTTATCCAATT+TGG - chr1_4:57371084-57371103 Msa0172350:intron 15.0%
!! ACATATATAGATAGCATAAT+TGG + chr1_4:57368494-57368513 None:intergenic 20.0%
!! TTCATTAACCTAATGTAAAA+CGG - chr1_4:57368796-57368815 Msa0172350:three_prime_UTR 20.0%
!! TATAAAATAGCAGTGATAAA+TGG + chr1_4:57368916-57368935 None:intergenic 20.0%
!!! TGACTAAAATTTTGGTTTTT+AGG + chr1_4:57368970-57368989 None:intergenic 20.0%
!! TAAGTACAACTCAAATTAAA+AGG + chr1_4:57369116-57369135 None:intergenic 20.0%
!! ATGGTTGACAAAAATAAATA+GGG + chr1_4:57369170-57369189 None:intergenic 20.0%
!! TATGGTTGACAAAAATAAAT+AGG + chr1_4:57369171-57369190 None:intergenic 20.0%
!!! TTCAATTAAGACCAATTTTT+TGG - chr1_4:57369315-57369334 Msa0172350:CDS 20.0%
!! ATACATAATAACAGAATGAT+TGG + chr1_4:57369678-57369697 None:intergenic 20.0%
!! CAAAATCACTAATATTTGTT+CGG + chr1_4:57369796-57369815 None:intergenic 20.0%
!! TTTCTAACTGTTTAAATTCA+GGG + chr1_4:57369912-57369931 None:intergenic 20.0%
!!! CTTTATTTTTACATTAAGCT+TGG - chr1_4:57370018-57370037 Msa0172350:intron 20.0%
!!! GAATTATAATTTTGAGCTTA+TGG - chr1_4:57370530-57370549 Msa0172350:intron 20.0%
!!! ATAATTTTAGTATCCGTAAT+TGG - chr1_4:57370715-57370734 Msa0172350:CDS 20.0%
!! ATTCATTAAAGTCAAACAAT+AGG + chr1_4:57371193-57371212 None:intergenic 20.0%
!! TGACTTTAATGAATATTCAA+AGG - chr1_4:57371199-57371218 Msa0172350:intron 20.0%
!! GACTTTAATGAATATTCAAA+GGG - chr1_4:57371200-57371219 Msa0172350:intron 20.0%
!! TTTATGAAGTTCAATGTAAT+TGG - chr1_4:57371696-57371715 Msa0172350:five_prime_UTR 20.0%
!! GCTGAAATAATAAATATATC+CGG + chr1_4:57371766-57371785 None:intergenic 20.0%
!! ATTGATGTGATGATAATGTA+TGG + chr1_4:57368631-57368650 None:intergenic 25.0%
! GATAATAATATTGCGGTTTA+GGG - chr1_4:57368744-57368763 Msa0172350:three_prime_UTR 25.0%
! GTTTAACCTTTGAATTATCA+AGG - chr1_4:57368766-57368785 Msa0172350:three_prime_UTR 25.0%
!! ACAAATCCTTGATAATTCAA+AGG + chr1_4:57368775-57368794 None:intergenic 25.0%
! TCATTAACCTAATGTAAAAC+GGG - chr1_4:57368797-57368816 Msa0172350:three_prime_UTR 25.0%
!!! TTATCACTGCTATTTTATAC+TGG - chr1_4:57368917-57368936 Msa0172350:CDS 25.0%
!! GAAATTTTAAGCTTTTCTGA+TGG + chr1_4:57369419-57369438 None:intergenic 25.0%
! ACTAATATTTGTTCGGTTAT+AGG + chr1_4:57369789-57369808 None:intergenic 25.0%
!! AAACAAACATTTTTCGCAAT+TGG + chr1_4:57369854-57369873 None:intergenic 25.0%
! GTTTCTAACTGTTTAAATTC+AGG + chr1_4:57369913-57369932 None:intergenic 25.0%
!!! CATCTACTAATTTGCTTATT+CGG + chr1_4:57370250-57370269 None:intergenic 25.0%
! AAAAAACACATGAATAAAGC+TGG + chr1_4:57370493-57370512 None:intergenic 25.0%
! ACATGAAAAGTTTGGTTAAA+TGG + chr1_4:57370580-57370599 None:intergenic 25.0%
! ACACTAATAAAAGAGAAACT+TGG - chr1_4:57371002-57371021 Msa0172350:intron 25.0%
! TTATTAAGACACAAGAAAGA+AGG + chr1_4:57371070-57371089 None:intergenic 25.0%
!!! GAAAGTGTAATGGAATTTTT+AGG - chr1_4:57371125-57371144 Msa0172350:intron 25.0%
! TTAAAGTCAAACAATAGGAA+AGG + chr1_4:57371188-57371207 None:intergenic 25.0%
! TATCTAAATTCTGGTATTGT+AGG - chr1_4:57371244-57371263 Msa0172350:intron 25.0%
! CTTTATATTACAGCTCAATA+GGG - chr1_4:57371473-57371492 Msa0172350:intron 25.0%
! TGAAAATACATTGAGCAATA+AGG + chr1_4:57371551-57371570 None:intergenic 25.0%
!!! TTGTTTTTAGTCTCAATTTG+TGG - chr1_4:57371640-57371659 Msa0172350:intron 25.0%
! ATTGAACTTCATAAATCATG+AGG + chr1_4:57371691-57371710 None:intergenic 25.0%
CTATATATATAGGACGAGAA+GGG + chr1_4:57368547-57368566 None:intergenic 30.0%
TCTATATATATAGGACGAGA+AGG + chr1_4:57368548-57368567 None:intergenic 30.0%
ACATTATCATCACATCAATC+AGG - chr1_4:57368632-57368651 Msa0172350:three_prime_UTR 30.0%
CGATAATAATATTGCGGTTT+AGG - chr1_4:57368743-57368762 Msa0172350:three_prime_UTR 30.0%
! TAGTAAACCCGTTTTACATT+AGG + chr1_4:57368807-57368826 None:intergenic 30.0%
! AGTACTGGAAAAACTAACTA+TGG - chr1_4:57369353-57369372 Msa0172350:CDS 30.0%
AAGCTTAAAATTTCCATCAC+TGG - chr1_4:57369425-57369444 Msa0172350:CDS 30.0%
ATTACATTATTGCTTCTGAC+TGG - chr1_4:57369501-57369520 Msa0172350:intron 30.0%
CTAGGATTAATGGAATTAAG+AGG - chr1_4:57369735-57369754 Msa0172350:intron 30.0%
! TATCTGACACATCATGTTTT+TGG - chr1_4:57369762-57369781 Msa0172350:intron 30.0%
!! GCGAAAAATGTTTGTTTTTC+AGG - chr1_4:57369857-57369876 Msa0172350:CDS 30.0%
AAATGCATCAAACAACCAAA+AGG + chr1_4:57369993-57370012 None:intergenic 30.0%
! TTTGGTTGTTTGATGCATTT+TGG - chr1_4:57369993-57370012 Msa0172350:intron 30.0%
AAGCACTACAACAAAGATTT+CGG - chr1_4:57370122-57370141 Msa0172350:CDS 30.0%
CAAAAGGACCATATATGTTA+TGG + chr1_4:57370172-57370191 None:intergenic 30.0%
! CATAACATATATGGTCCTTT+TGG - chr1_4:57370170-57370189 Msa0172350:CDS 30.0%
AAGCAACAAACTCATTACAT+CGG + chr1_4:57370294-57370313 None:intergenic 30.0%
! TACAGACAAATTTGAGATGT+GGG - chr1_4:57370373-57370392 Msa0172350:CDS 30.0%
ATTGCATAAATGACATTGAG+AGG - chr1_4:57370677-57370696 Msa0172350:CDS 30.0%
! TTTTAGTATCCGTAATTGGT+TGG - chr1_4:57370719-57370738 Msa0172350:CDS 30.0%
TTTAGTATCCGTAATTGGTT+GGG - chr1_4:57370720-57370739 Msa0172350:CDS 30.0%
TCATCACTTCCAATATTTAC+CGG + chr1_4:57370870-57370889 None:intergenic 30.0%
AAATATTGGAAGTGATGAGA+TGG - chr1_4:57370872-57370891 Msa0172350:CDS 30.0%
TAATAAAAGAGAAACTTGGC+TGG - chr1_4:57371006-57371025 Msa0172350:intron 30.0%
AATAAAAGAGAAACTTGGCT+GGG - chr1_4:57371007-57371026 Msa0172350:intron 30.0%
TATACCTTCAACTTCATTGT+TGG + chr1_4:57371035-57371054 None:intergenic 30.0%
! TCTTCTTTCAGAAAGTGTAA+TGG - chr1_4:57371115-57371134 Msa0172350:intron 30.0%
TTACAGCAGTATCTAAATTC+TGG - chr1_4:57371235-57371254 Msa0172350:intron 30.0%
TAAATTCTGGTATTGTAGGA+TGG - chr1_4:57371248-57371267 Msa0172350:intron 30.0%
AAATTCTGGTATTGTAGGAT+GGG - chr1_4:57371249-57371268 Msa0172350:intron 30.0%
GATTACATATGTCTGGATTA+AGG - chr1_4:57371277-57371296 Msa0172350:intron 30.0%
GATTAAGGAACAACTTGAAA+GGG - chr1_4:57371292-57371311 Msa0172350:intron 30.0%
CAAAGAGAGTAGTTAATTCA+TGG - chr1_4:57371412-57371431 Msa0172350:intron 30.0%
GCTTTATATTACAGCTCAAT+AGG - chr1_4:57371472-57371491 Msa0172350:intron 30.0%
!!! ACCTTTTTTAAAGCACTTGT+CGG - chr1_4:57371577-57371596 Msa0172350:intron 30.0%
! TATCTAAAATCACACAACTG+TGG + chr1_4:57371831-57371850 None:intergenic 30.0%
ATGAAAAGCTTGTCTTTGTG+TGG - chr1_4:57368449-57368468 Msa0172350:three_prime_UTR 35.0%
CTAGCAAAATAACGAACAAG+TGG - chr1_4:57368517-57368536 Msa0172350:three_prime_UTR 35.0%
! TGATAATGTATGGAGAGAAG+AGG + chr1_4:57368621-57368640 None:intergenic 35.0%
GCATAGACAATTGATATGCT+AGG + chr1_4:57369094-57369113 None:intergenic 35.0%
GAATGCAATACAACACATGA+AGG + chr1_4:57369253-57369272 None:intergenic 35.0%
ATCCTGCAGAACCAAAAAAT+TGG + chr1_4:57369329-57369348 None:intergenic 35.0%
!!! AATTTTTTGGTTCTGCAGGA+TGG - chr1_4:57369328-57369347 Msa0172350:CDS 35.0%
!!! ATTTTTTGGTTCTGCAGGAT+GGG - chr1_4:57369329-57369348 Msa0172350:CDS 35.0%
AATTCCATCTTGTTGATCTC+AGG - chr1_4:57369564-57369583 Msa0172350:intron 35.0%
ATTCCATCTTGTTGATCTCA+GGG - chr1_4:57369565-57369584 Msa0172350:intron 35.0%
AACTGCTTAACGGTTACTAA+AGG - chr1_4:57369596-57369615 Msa0172350:intron 35.0%
ACTGCTTAACGGTTACTAAA+GGG - chr1_4:57369597-57369616 Msa0172350:intron 35.0%
TCAATATGATTGAAGCTGCT+AGG - chr1_4:57369717-57369736 Msa0172350:intron 35.0%
ATTGAAGCTGCTAGGATTAA+TGG - chr1_4:57369725-57369744 Msa0172350:intron 35.0%
AACTACTAATGTCAGCTTGA+AGG - chr1_4:57369930-57369949 Msa0172350:CDS 35.0%
!!! TATATGGTCCTTTTGGAACA+TGG - chr1_4:57370177-57370196 Msa0172350:CDS 35.0%
ATACCTTTCCATGTTCCAAA+AGG + chr1_4:57370188-57370207 None:intergenic 35.0%
!! AGTTTGTTGCTTTGTCATAC+AGG - chr1_4:57370302-57370321 Msa0172350:intron 35.0%
! CTACAGACAAATTTGAGATG+TGG - chr1_4:57370372-57370391 Msa0172350:CDS 35.0%
! ACAGACAAATTTGAGATGTG+GGG - chr1_4:57370374-57370393 Msa0172350:CDS 35.0%
TTCAACACACTCATCAATGA+AGG + chr1_4:57370426-57370445 None:intergenic 35.0%
TTCATTGATGAGTGTGTTGA+AGG - chr1_4:57370425-57370444 Msa0172350:intron 35.0%
CAGCTCAAACATGAAAAGTT+TGG + chr1_4:57370588-57370607 None:intergenic 35.0%
TTCATGTTTGAGCTGTTCTA+AGG - chr1_4:57370593-57370612 Msa0172350:CDS 35.0%
TCATGTTTGAGCTGTTCTAA+GGG - chr1_4:57370594-57370613 Msa0172350:CDS 35.0%
TTGGGATAGGGAAAATGATA+CGG - chr1_4:57370738-57370757 Msa0172350:CDS 35.0%
TATGATAAGCCCTGACAATT+TGG - chr1_4:57370802-57370821 Msa0172350:CDS 35.0%
AACAACAGACCAAATTGTCA+GGG + chr1_4:57370814-57370833 None:intergenic 35.0%
TAACAACAGACCAAATTGTC+AGG + chr1_4:57370815-57370834 None:intergenic 35.0%
TAAGACACAAGAAAGAAGGA+AGG + chr1_4:57371066-57371085 None:intergenic 35.0%
! CACTTTCTGAAAGAAGATGA+AGG + chr1_4:57371112-57371131 None:intergenic 35.0%
GGATTAAGGAACAACTTGAA+AGG - chr1_4:57371291-57371310 Msa0172350:intron 35.0%
AGCAGTGAAGTAAATGTTTC+CGG - chr1_4:57371439-57371458 Msa0172350:intron 35.0%
ATATAAAGCACACTCTTCTC+CGG + chr1_4:57371461-57371480 None:intergenic 35.0%
CACGTTATTTATGCGTAGAT+CGG - chr1_4:57371522-57371541 Msa0172350:intron 35.0%
!! ACCGACAAGTGCTTTAAAAA+AGG + chr1_4:57371581-57371600 None:intergenic 35.0%
GATATTAGTGTATGTAGTGC+CGG - chr1_4:57371744-57371763 Msa0172350:five_prime_UTR 35.0%
TGTCTTTGTGTGGAAGTAGA+TGG - chr1_4:57368459-57368478 Msa0172350:three_prime_UTR 40.0%
ATATATAGGACGAGAAGGGA+AGG + chr1_4:57368543-57368562 None:intergenic 40.0%
!! GTTTGAGTTGAGAAGGCAAT+TGG + chr1_4:57368594-57368613 None:intergenic 40.0%
!! AGGTTTGGTTTGAGTTGAGA+AGG + chr1_4:57368601-57368620 None:intergenic 40.0%
ATGTATGGAGAGAAGAGGTT+TGG + chr1_4:57368616-57368635 None:intergenic 40.0%
CAATTGATATGCTAGGACGT+AGG + chr1_4:57369087-57369106 None:intergenic 40.0%
! ATACAACACATGAAGGCACA+TGG + chr1_4:57369246-57369265 None:intergenic 40.0%
!!! GACCAATTTTTTGGTTCTGC+AGG - chr1_4:57369324-57369343 Msa0172350:CDS 40.0%
CTCTCTCTCAAGATTCTCAT+AGG + chr1_4:57369387-57369406 None:intergenic 40.0%
AAAATTTCCATCACTGGTGC+TGG - chr1_4:57369431-57369450 Msa0172350:CDS 40.0%
AAATTTCCATCACTGGTGCT+GGG - chr1_4:57369432-57369451 Msa0172350:CDS 40.0%
GAAAAATGAGCACATGACTG+AGG - chr1_4:57369526-57369545 Msa0172350:intron 40.0%
GGTCATGGATAACTGCTTAA+CGG - chr1_4:57369586-57369605 Msa0172350:intron 40.0%
CTGCTTAACGGTTACTAAAG+GGG - chr1_4:57369598-57369617 Msa0172350:intron 40.0%
TTTCAATCTTGCCGCTGATA+TGG - chr1_4:57369631-57369650 Msa0172350:intron 40.0%
TTCAATCTTGCCGCTGATAT+GGG - chr1_4:57369632-57369651 Msa0172350:intron 40.0%
TTTAGCCACAAGATGCGTAT+GGG - chr1_4:57370069-57370088 Msa0172350:intron 40.0%
GGGAGGTTCCATAACATATA+TGG - chr1_4:57370161-57370180 Msa0172350:CDS 40.0%
!! TTGTTGCTTTGTCATACAGG+TGG - chr1_4:57370305-57370324 Msa0172350:intron 40.0%
! AAATTTGAGATGTGGGGAGA+TGG - chr1_4:57370380-57370399 Msa0172350:CDS 40.0%
! AGTGTGTTGAAGGTGTACTT+AGG - chr1_4:57370435-57370454 Msa0172350:intron 40.0%
! TGTTGAAGGTGTACTTAGGT+AGG - chr1_4:57370439-57370458 Msa0172350:intron 40.0%
TCTTGGCTGATTGTTTGGTT+TGG - chr1_4:57370462-57370481 Msa0172350:intron 40.0%
! TGTTGATTGAGTGAGCTAAC+TGG + chr1_4:57370655-57370674 None:intergenic 40.0%
TATCCGTAATTGGTTGGGAT+AGG - chr1_4:57370725-57370744 Msa0172350:CDS 40.0%
ATCCGTAATTGGTTGGGATA+GGG - chr1_4:57370726-57370745 Msa0172350:CDS 40.0%
TTCCCTATCCCAACCAATTA+CGG + chr1_4:57370731-57370750 None:intergenic 40.0%
!!! TGAGATCGTTCTTGGTTTTG+AGG - chr1_4:57370914-57370933 Msa0172350:CDS 40.0%
ACTCCTATACATCACATTCC+TGG - chr1_4:57370945-57370964 Msa0172350:CDS 40.0%
AGAAGATGAAGGAGCCAAAT+TGG + chr1_4:57371101-57371120 None:intergenic 40.0%
GGTCTTGATACATCAGGATA+CGG - chr1_4:57371326-57371345 Msa0172350:intron 40.0%
CACAACTGTGGAAGTAACAA+TGG + chr1_4:57371819-57371838 None:intergenic 40.0%
! TGAGTTGAGAAGGCAATTGG+TGG + chr1_4:57368591-57368610 None:intergenic 45.0%
ACACACCAAGTGCAGATAAG+TGG - chr1_4:57369045-57369064 Msa0172350:intron 45.0%
CACACCAAGTGCAGATAAGT+GGG - chr1_4:57369046-57369065 Msa0172350:intron 45.0%
ACACCAAGTGCAGATAAGTG+GGG - chr1_4:57369047-57369066 Msa0172350:intron 45.0%
ATTCCCCACTTATCTGCACT+TGG + chr1_4:57369053-57369072 None:intergenic 45.0%
ATCTTGAGAGAGAGCCTTAC+TGG - chr1_4:57369393-57369412 Msa0172350:CDS 45.0%
! AGCTTTTCTGATGGCCAGTA+AGG + chr1_4:57369410-57369429 None:intergenic 45.0%
! AATTTCCATCACTGGTGCTG+GGG - chr1_4:57369433-57369452 Msa0172350:CDS 45.0%
TGACCCTGAGATCAACAAGA+TGG + chr1_4:57369571-57369590 None:intergenic 45.0%
TCTTGTTGATCTCAGGGTCA+TGG - chr1_4:57369571-57369590 Msa0172350:intron 45.0%
CAGCGGCAAGATTGAAAACA+TGG + chr1_4:57369628-57369647 None:intergenic 45.0%
AGGGTAGATACAAGCACTTG+AGG + chr1_4:57369893-57369912 None:intergenic 45.0%
!! GGTTTGTTCGCGATTCCTTT+TGG - chr1_4:57369975-57369994 Msa0172350:intron 45.0%
GTTTAGCCACAAGATGCGTA+TGG - chr1_4:57370068-57370087 Msa0172350:intron 45.0%
TGTTATGGAACCTCCCAATG+CGG + chr1_4:57370157-57370176 None:intergenic 45.0%
!!! GGTCCTTTTGGAACATGGAA+AGG - chr1_4:57370182-57370201 Msa0172350:CDS 45.0%
TGCTTTGTCATACAGGTGGA+AGG - chr1_4:57370309-57370328 Msa0172350:intron 45.0%
GCTTTGTCATACAGGTGGAA+GGG - chr1_4:57370310-57370329 Msa0172350:intron 45.0%
AGGTGTACTTAGGTAGGTCT+TGG - chr1_4:57370445-57370464 Msa0172350:intron 45.0%
GTAGGTCTTGGCTGATTGTT+TGG - chr1_4:57370457-57370476 Msa0172350:intron 45.0%
!! TTCCAATATTTACCGGCTCG+CGG + chr1_4:57370863-57370882 None:intergenic 45.0%
GATGGTCAGCATGAATGAGA+TGG - chr1_4:57370890-57370909 Msa0172350:CDS 45.0%
GGCTCCAACAATGAAGTTGA+AGG - chr1_4:57371028-57371047 Msa0172350:intron 45.0%
GGCTGAGGATTACATATGTC+TGG - chr1_4:57371270-57371289 Msa0172350:intron 45.0%
GGAACAACTTGAAAGGGAGA+AGG - chr1_4:57371298-57371317 Msa0172350:intron 45.0%
GCTCAAGGTCTTGATACATC+AGG - chr1_4:57371320-57371339 Msa0172350:intron 45.0%
AGGATACGGCTCATCAAAAG+TGG - chr1_4:57371340-57371359 Msa0172350:intron 45.0%
! TTAAAGCACTTGTCGGTGCT+TGG - chr1_4:57371584-57371603 Msa0172350:intron 45.0%
! TAAAGCACTTGTCGGTGCTT+GGG - chr1_4:57371585-57371604 Msa0172350:intron 45.0%
! CAACACATGAAGGCACATGG+TGG + chr1_4:57369243-57369262 None:intergenic 50.0%
! TTCTGCAGGATGGGAAGTAC+TGG - chr1_4:57369338-57369357 Msa0172350:CDS 50.0%
! ATTTCCATCACTGGTGCTGG+GGG - chr1_4:57369434-57369453 Msa0172350:CDS 50.0%
AATCTTGCCGCTGATATGGG+TGG - chr1_4:57369635-57369654 Msa0172350:intron 50.0%
ACCCATTCCACCCATATCAG+CGG + chr1_4:57369645-57369664 None:intergenic 50.0%
GCTTGAAGGAGTCTGATGCA+TGG - chr1_4:57369944-57369963 Msa0172350:CDS 50.0%
AATCGCGAACAAACCTCAGC+AGG + chr1_4:57369970-57369989 None:intergenic 50.0%
TCTAGCCCATACGCATCTTG+TGG + chr1_4:57370077-57370096 None:intergenic 50.0%
GCTAGAGAAGCTTGCAACAG+AGG - chr1_4:57370091-57370110 Msa0172350:intron 50.0%
! TTCGGAATTGAGTGCCGCAT+TGG - chr1_4:57370140-57370159 Msa0172350:CDS 50.0%
! TCGGAATTGAGTGCCGCATT+GGG - chr1_4:57370141-57370160 Msa0172350:CDS 50.0%
TCATACAGGTGGAAGGGAGA+AGG - chr1_4:57370316-57370335 Msa0172350:intron 50.0%
!!! AGGCTCCTGCTGCTTTTTGT+CGG - chr1_4:57370336-57370355 Msa0172350:CDS 50.0%
GCTTTCCGACAAAAAGCAGC+AGG + chr1_4:57370344-57370363 None:intergenic 50.0%
TAAATCCGATTTCCGCGAGC+CGG - chr1_4:57370848-57370867 Msa0172350:CDS 50.0%
!! ATTTACCGGCTCGCGGAAAT+CGG + chr1_4:57370856-57370875 None:intergenic 50.0%
TTCCGCGAGCCGGTAAATAT+TGG - chr1_4:57370858-57370877 Msa0172350:CDS 50.0%
GAGATGGCTGAGATCGTTCT+TGG - chr1_4:57370906-57370925 Msa0172350:CDS 50.0%
GGGCCAGGAATGTGATGTAT+AGG + chr1_4:57370951-57370970 None:intergenic 50.0%
!! TGGTATTGTAGGATGGGCTG+AGG - chr1_4:57371255-57371274 Msa0172350:intron 50.0%
CTTGAAAGGGAGAAGGCTCA+AGG - chr1_4:57371305-57371324 Msa0172350:intron 50.0%
CGAAGTGAGCCTAATTGGAC+CGG + chr1_4:57371380-57371399 None:intergenic 50.0%
CGGTCCAATTAGGCTCACTT+CGG - chr1_4:57371378-57371397 Msa0172350:intron 50.0%
GGTCCAATTAGGCTCACTTC+GGG - chr1_4:57371379-57371398 Msa0172350:intron 50.0%
GCTCAATAGGGTCGATGTCA+TGG - chr1_4:57371485-57371504 Msa0172350:intron 50.0%
! AAAGCACTTGTCGGTGCTTG+GGG - chr1_4:57371586-57371605 Msa0172350:intron 50.0%
AAAACCCCCAGCACCAGTGA+TGG + chr1_4:57369441-57369460 None:intergenic 55.0%
TTATCGCGTCGCACTTAGCG+CGG - chr1_4:57369459-57369478 Msa0172350:intron 55.0%
TGCCGCTGATATGGGTGGAA+TGG - chr1_4:57369640-57369659 Msa0172350:intron 55.0%
GCCGCTGATATGGGTGGAAT+GGG - chr1_4:57369641-57369660 Msa0172350:intron 55.0%
! GAATTGAGTGCCGCATTGGG+AGG - chr1_4:57370144-57370163 Msa0172350:CDS 55.0%
ACATCACATTCCTGGCCCAG+AGG - chr1_4:57370953-57370972 Msa0172350:intron 55.0%
CATCACATTCCTGGCCCAGA+GGG - chr1_4:57370954-57370973 Msa0172350:intron 55.0%
TACGACCACGAACACCCTCT+GGG + chr1_4:57370971-57370990 None:intergenic 55.0%
TTACGACCACGAACACCCTC+TGG + chr1_4:57370972-57370991 None:intergenic 55.0%
AGTGGTGCAAACCCAAGCAC+CGG - chr1_4:57371358-57371377 Msa0172350:intron 55.0%
!! ACCCAAGCACCGGTCCAATT+AGG - chr1_4:57371368-57371387 Msa0172350:intron 55.0%
GCCTAATTGGACCGGTGCTT+GGG + chr1_4:57371372-57371391 None:intergenic 55.0%
AGCCTAATTGGACCGGTGCT+TGG + chr1_4:57371373-57371392 None:intergenic 55.0%
CTGCCCGAAGTGAGCCTAAT+TGG + chr1_4:57371385-57371404 None:intergenic 55.0%
! AAGCACTTGTCGGTGCTTGG+GGG - chr1_4:57371587-57371606 Msa0172350:intron 55.0%
CTTAGCGCGGCGTCTCAAGA+AGG - chr1_4:57369472-57369491 Msa0172350:intron 60.0%
GTCTGATGCATGGCCTGCTG+AGG - chr1_4:57369954-57369973 Msa0172350:CDS 60.0%
AGCGCGGCGTCTCAAGAAGG+AGG - chr1_4:57369475-57369494 Msa0172350:intron 65.0%
GCGCGGCGTCTCAAGAAGGA+GGG - chr1_4:57369476-57369495 Msa0172350:intron 65.0%
GGCTCACTTCGGGCAGCAGA+CGG - chr1_4:57371389-57371408 Msa0172350:intron 65.0%
! CACTTGTCGGTGCTTGGGGG+TGG - chr1_4:57371590-57371609 Msa0172350:intron 65.0%
CCACGAACACCCTCTGGGCC+AGG + chr1_4:57370966-57370985 None:intergenic 70.0%
!! CCTGGCCCAGAGGGTGTTCG+TGG - chr1_4:57370963-57370982 Msa0172350:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 57368438 57371873 57368438 ID=Msa0172350;Name=Msa0172350
chr1_4 mRNA 57368438 57371873 57368438 ID=Msa0172350-mRNA-1;Parent=Msa0172350;Name=Msa0172350-mRNA-1;_AED=0.08;_eAED=0.08;_QI=217|1|1|1|0.83|0.71|7|446|379
chr1_4 exon 57368438 57369045 57368438 ID=Msa0172350-mRNA-1:exon:17551;Parent=Msa0172350-mRNA-1
chr1_4 exon 57369262 57369469 57369262 ID=Msa0172350-mRNA-1:exon:17550;Parent=Msa0172350-mRNA-1
chr1_4 exon 57369855 57369987 57369855 ID=Msa0172350-mRNA-1:exon:17549;Parent=Msa0172350-mRNA-1
chr1_4 exon 57370108 57370237 57370108 ID=Msa0172350-mRNA-1:exon:17548;Parent=Msa0172350-mRNA-1
chr1_4 exon 57370336 57370432 57370336 ID=Msa0172350-mRNA-1:exon:17547;Parent=Msa0172350-mRNA-1
chr1_4 exon 57370555 57370965 57370555 ID=Msa0172350-mRNA-1:exon:17546;Parent=Msa0172350-mRNA-1
chr1_4 exon 57371658 57371873 57371658 ID=Msa0172350-mRNA-1:exon:17545;Parent=Msa0172350-mRNA-1
chr1_4 five_prime_UTR 57371658 57371873 57371658 ID=Msa0172350-mRNA-1:five_prime_utr;Parent=Msa0172350-mRNA-1
chr1_4 five_prime_UTR 57370965 57370965 57370965 ID=Msa0172350-mRNA-1:five_prime_utr;Parent=Msa0172350-mRNA-1
chr1_4 CDS 57370555 57370964 57370555 ID=Msa0172350-mRNA-1:cds;Parent=Msa0172350-mRNA-1
chr1_4 CDS 57370336 57370432 57370336 ID=Msa0172350-mRNA-1:cds;Parent=Msa0172350-mRNA-1
chr1_4 CDS 57370108 57370237 57370108 ID=Msa0172350-mRNA-1:cds;Parent=Msa0172350-mRNA-1
chr1_4 CDS 57369855 57369987 57369855 ID=Msa0172350-mRNA-1:cds;Parent=Msa0172350-mRNA-1
chr1_4 CDS 57369262 57369469 57369262 ID=Msa0172350-mRNA-1:cds;Parent=Msa0172350-mRNA-1
chr1_4 CDS 57368884 57369045 57368884 ID=Msa0172350-mRNA-1:cds;Parent=Msa0172350-mRNA-1
chr1_4 three_prime_UTR 57368438 57368883 57368438 ID=Msa0172350-mRNA-1:three_prime_utr;Parent=Msa0172350-mRNA-1
Gene Sequence

>Msa0172350

ATGGGAAGTACTGGAAAAACTAACTATGGAGAATACACCTATGAGAATCTTGAGAGAGAGCCTTACTGGCCATCAGAAAAGCTTAAAATTTCCATCACTGGTGCTGGGGGTTTTATCGCGTCGCACTTAGCGCGGCGTCTCAAGAAGGAGGGACATTACATTATTGCTTCTGACTGGAAGAAAAATGAGCACATGACTGAGGACATGTTCTGTGATGAATTCCATCTTGTTGATCTCAGGGTCATGGATAACTGCTTAACGGTTACTAAAGGGGTTGACCATGTTTTCAATCTTGCCGCTGATATGGGTGGAATGGGTTTTATTCAGTCCAATCATTCTGTTATTATGTATAACAACACAATGATTAGTTTCAATATGATTGAAGCTGCTAGGATTAATGGAATTAAGAGGTTCTTCTATGCCTCAAGTGCTTGTATCTACCCTGAATTTAAACAGTTAGAAACTACTAATGTCAGCTTGAAGGAGTCTGATGCATGGCCTGCTGAGCCACAAGATGCGTATGGGCTAGAGAAGCTTGCAACAGAGGAGATTTGCAAGCACTACAACAAAGATTTCGGAATTGAGTGCCGCATTGGGAGGTTCCATAACATATATGGTCCTTTTGGAACATGGAAAGGTGGAAGGGAGAAGGCTCCTGCTGCTTTTTGTCGGAAAGCAATCACGTCTACAGACAAATTTGAGATGTGGGGAGATGGTTTGCAAACACGATCATTTACCTTCATTGATGAGTGTGTTGAAGGTGTACTTAGACTGACTAAATCCGATTTCCGCGAGCCGGTAAATATTGGAAGTGATGAGATGGTCAGCATGAATGAGATGGCTGAGATCGTTCTTGGTTTTGAGGACAAGAAGACTCCTATACATCACATTCCTGGCCCAGAGGGTGTTCGTGGTCGTAACTCAGACAATACACTAATAAAAGAGAAACTTGGCTGGGCTCCAACAATGAAGTTGAAGGATGGGCTGAGGATTACATATGTCTGGATTAAGGAACAACTTGAAAGGGAGAAGGCTCAAGGTCTTGATACATCAGGATACGGCTCATCAAAAGTGGTGCAAACCCAAGCACCGGTCCAATTAGGCTCACTTCGGGCAGCAGACGGCAAAGAGAGTAGTTAA

Protein sequence

>Msa0172350

MGSTGKTNYGEYTYENLEREPYWPSEKLKISITGAGGFIASHLARRLKKEGHYIIASDWKKNEHMTEDMFCDEFHLVDLRVMDNCLTVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEEICKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFEDKKTPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRITYVWIKEQLEREKAQGLDTSGYGSSKVVQTQAPVQLGSLRAADGKESS*