AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1390310


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1390310 MtrunA17_Chr1g0190771 98.945 379 4 0 1 379 1 379 0.0 787
Msa1390310 MtrunA17_Chr7g0274131 91.005 378 32 2 1 377 1 377 0.0 727
Msa1390310 MtrunA17_Chr4g0067461 28.165 316 208 8 29 340 112 412 2.03e-28 115
Msa1390310 MtrunA17_Chr4g0031131 27.832 309 208 9 28 331 32 330 3.26e-25 104
Msa1390310 MtrunA17_Chr2g0327981 28.662 314 199 11 28 331 38 336 4.69e-25 104
Msa1390310 MtrunA17_Chr1g0195521 25.959 339 223 9 28 347 118 447 1.33e-24 104
Msa1390310 MtrunA17_Chr7g0268991 24.768 323 216 8 29 342 16 320 2.43e-21 93.6
Msa1390310 MtrunA17_Chr1g0182091 28.311 219 150 5 114 331 1 213 2.14e-17 80.5
Msa1390310 MtrunA17_Chr4g0056941 24.340 341 213 11 30 338 95 422 4.68e-15 76.3
Msa1390310 MtrunA17_Chr4g0011281 24.189 339 214 12 28 335 101 427 6.59e-15 75.9
Msa1390310 MtrunA17_Chr5g0398811 24.412 340 212 12 28 335 90 416 2.47e-14 73.9
Msa1390310 MtrunA17_Chr1g0147841 25.688 327 217 14 26 337 3 318 4.49e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1390310 AT5G28840.2 90.981 377 34 0 1 377 1 377 0.0 729
Msa1390310 AT5G28840.1 90.981 377 34 0 1 377 1 377 0.0 729
Msa1390310 AT3G62830.2 27.160 324 222 8 28 347 119 432 2.53e-28 115
Msa1390310 AT3G62830.1 27.160 324 222 8 28 347 119 432 2.53e-28 115
Msa1390310 AT2G47650.1 28.247 308 207 8 28 331 121 418 4.37e-28 114
Msa1390310 AT3G53520.1 27.744 328 222 9 26 348 118 435 4.38e-28 114
Msa1390310 AT2G47650.2 27.707 314 207 9 28 331 121 424 2.21e-26 110
Msa1390310 AT3G53520.2 27.134 328 222 10 26 348 118 433 3.98e-25 106
Msa1390310 AT2G28760.1 28.013 307 206 9 28 329 31 327 7.32e-25 104
Msa1390310 AT2G28760.2 28.013 307 206 9 28 329 31 327 7.32e-25 104
Msa1390310 AT2G28760.3 28.013 307 206 9 28 329 31 327 7.32e-25 104
Msa1390310 AT3G46440.2 27.653 311 202 10 28 329 29 325 8.49e-25 103
Msa1390310 AT3G46440.1 27.653 311 202 10 28 329 29 325 8.49e-25 103
Msa1390310 AT2G28760.4 28.013 307 206 9 28 329 62 358 2.12e-24 103
Msa1390310 AT5G59290.4 27.010 311 204 10 28 329 1 297 4.84e-24 101
Msa1390310 AT5G59290.1 27.010 311 204 10 28 329 30 326 7.29e-24 101
Msa1390310 AT1G73250.1 25.714 315 209 7 29 335 18 315 7.48e-24 100
Msa1390310 AT5G59290.2 27.010 311 204 10 28 329 45 341 9.49e-24 101
Msa1390310 AT5G59290.3 27.010 311 204 10 28 329 23 319 1.51e-23 100
Msa1390310 AT3G53520.4 25.779 353 220 11 26 348 118 458 2.29e-23 101
Msa1390310 AT1G17890.1 25.231 325 216 8 29 344 21 327 3.00e-23 99.4
Msa1390310 AT1G17890.2 25.231 325 216 8 29 344 13 319 3.18e-23 99.4
Msa1390310 AT1G17890.3 25.231 325 216 8 29 344 13 319 3.18e-23 99.4
Msa1390310 AT2G45310.1 26.100 341 205 14 28 335 97 423 8.81e-18 84.7
Msa1390310 AT3G23820.1 24.793 363 220 14 28 351 112 460 3.63e-16 80.1
Msa1390310 AT4G00110.1 24.706 340 211 13 28 335 91 417 4.08e-15 77.0
Msa1390310 AT1G02000.1 23.824 340 214 12 28 335 92 418 6.14e-14 73.2
Msa1390310 AT4G30440.1 23.754 341 213 12 28 335 88 414 1.16e-12 69.3
Msa1390310 AT1G53500.1 24.771 327 220 13 30 341 11 326 1.45e-12 69.7

Find 135 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATGAAGTTCAATGTAAT+TGG 0.238222 tig0021333:-79860 Msa1390310:three_prime_UTR
ATTGAAGCTGCTAGGATTAA+TGG 0.256067 tig0021333:-81831 Msa1390310:CDS
CATAACATATATGGTCCTTT+TGG 0.258635 tig0021333:-81386 Msa1390310:CDS
CTGCCCGAAGTGAGCCTAAT+TGG 0.271744 tig0021333:+80174 None:intergenic
TTCCGCGAGCCGGTAAATAT+TGG 0.274622 tig0021333:-80698 Msa1390310:CDS
GTTTCTAACTGTTTAAATTC+AGG 0.285374 tig0021333:+81646 None:intergenic
ACACATATAGATAGCATAAT+TGG 0.298099 tig0021333:+83086 None:intergenic
GCTTTATATTACAGCTCAAT+AGG 0.299580 tig0021333:-80084 Msa1390310:three_prime_UTR
TGAAAATACATTGAGCAATA+AGG 0.303319 tig0021333:+80008 None:intergenic
ATCTTGAGAGAGAGCCTTAC+TGG 0.304697 tig0021333:-82163 Msa1390310:CDS
AGCAGTGAAGTAAATGTTTC+CGG 0.313113 tig0021333:-80117 Msa1390310:three_prime_UTR
TTTCAATCTTGCCGCTGATA+TGG 0.324249 tig0021333:-81925 Msa1390310:CDS
TAAAGCACTTGTCGGTGCTT+GGG 0.326365 tig0021333:-79971 Msa1390310:three_prime_UTR
GAGATGGCTGAGATCGTTCT+TGG 0.352457 tig0021333:-80650 Msa1390310:CDS
TATACCTTCAACTTCATTGT+TGG 0.357453 tig0021333:+80524 None:intergenic
GCCTAATTGGACCGGTGCTT+GGG 0.360185 tig0021333:+80187 None:intergenic
AATTCCATCTTGTTGATCTC+AGG 0.363929 tig0021333:-81992 Msa1390310:CDS
AAAATTTCCATCACTGGTGC+TGG 0.368034 tig0021333:-82125 Msa1390310:CDS
ATTTACCGGCTCGCGGAAAT+CGG 0.371961 tig0021333:+80703 None:intergenic
CAAAAGGACCATATATGTTA+TGG 0.374113 tig0021333:+81387 None:intergenic
AAGCACTACAACAAAGATTT+CGG 0.376422 tig0021333:-81434 Msa1390310:CDS
TCATCACTTCCAATATTTAC+CGG 0.378878 tig0021333:+80689 None:intergenic
AGCCTAATTGGACCGGTGCT+TGG 0.382304 tig0021333:+80186 None:intergenic
TTCAATCTTGCCGCTGATAT+GGG 0.385962 tig0021333:-81924 Msa1390310:CDS
GATTACATATGTCTGGATTA+AGG 0.386996 tig0021333:-80279 Msa1390310:CDS
TTAAAGCACTTGTCGGTGCT+TGG 0.387514 tig0021333:-79972 Msa1390310:three_prime_UTR
GGGAGGTTCCATAACATATA+TGG 0.396979 tig0021333:-81395 Msa1390310:CDS
ACTGCTTAACGGTTACTAAA+GGG 0.409840 tig0021333:-81959 Msa1390310:CDS
TGTCTTTGTGTGGAAGTAGA+TGG 0.413404 tig0021333:-83118 Msa1390310:five_prime_UTR
AACTACTAATGTCAGCTTGA+AGG 0.417690 tig0021333:-81626 Msa1390310:CDS
TTTCTAACTGTTTAAATTCA+GGG 0.425655 tig0021333:+81647 None:intergenic
GGCTGAGGATTACATATGTC+TGG 0.425884 tig0021333:-80286 Msa1390310:CDS
TTACGACCACGAACACCCTC+TGG 0.430857 tig0021333:+80587 None:intergenic
ACATTATCATCACATCAATC+AGG 0.432026 tig0021333:-82943 Msa1390310:intron
GGGCCAGGAATGTGATGTAT+AGG 0.440229 tig0021333:+80608 None:intergenic
AAGCTTAAAATTTCCATCAC+TGG 0.443314 tig0021333:-82131 Msa1390310:CDS
CAAAGAGAGTAGTTAATTCA+TGG 0.447053 tig0021333:-80144 Msa1390310:exon
ATACATAATAACAGAATGAT+TGG 0.454190 tig0021333:+81881 None:intergenic
ATGTATGGAGAGAAGAGGTT+TGG 0.454830 tig0021333:+82962 None:intergenic
TTCGGAATTGAGTGCCGCAT+TGG 0.455787 tig0021333:-81416 Msa1390310:CDS
CTTTATATTACAGCTCAATA+GGG 0.457105 tig0021333:-80083 Msa1390310:three_prime_UTR
TTCATTGATGAGTGTGTTGA+AGG 0.460492 tig0021333:-81131 Msa1390310:CDS
CCACGAACACCCTCTGGGCC+AGG 0.469580 tig0021333:+80593 None:intergenic
GGTCCAATTAGGCTCACTTC+GGG 0.470769 tig0021333:-80177 Msa1390310:CDS
TCGGAATTGAGTGCCGCATT+GGG 0.470875 tig0021333:-81415 Msa1390310:CDS
CTCTCTCTCAAGATTCTCAT+AGG 0.472504 tig0021333:+82172 None:intergenic
AAAGCACTTGTCGGTGCTTG+GGG 0.472833 tig0021333:-79970 Msa1390310:three_prime_UTR
AGGTTTGGTTTGAGTTGAGA+AGG 0.473129 tig0021333:+82977 None:intergenic
TTCTGCAGGATGGGAAGTAC+TGG 0.475790 tig0021333:-82218 Msa1390310:intron
ACTCCTATACATCACATTCC+TGG 0.476449 tig0021333:-80611 Msa1390310:CDS
ACCCAAGCACCGGTCCAATT+AGG 0.477394 tig0021333:-80188 Msa1390310:CDS
AAATTTCCATCACTGGTGCT+GGG 0.477839 tig0021333:-82124 Msa1390310:CDS
AACTGCTTAACGGTTACTAA+AGG 0.478063 tig0021333:-81960 Msa1390310:CDS
CTAGGATTAATGGAATTAAG+AGG 0.478585 tig0021333:-81821 Msa1390310:intron
CACGTTATTTATGCGTAGAT+CGG 0.479941 tig0021333:-80034 Msa1390310:three_prime_UTR
ATATAAAGCACACTCTTCTC+CGG 0.481376 tig0021333:+80098 None:intergenic
GCCGCTGATATGGGTGGAAT+GGG 0.482360 tig0021333:-81915 Msa1390310:CDS
CCTGGCCCAGAGGGTGTTCG+TGG 0.486762 tig0021333:-80593 Msa1390310:CDS
GCTGAAATAATAAATATATC+CGG 0.489403 tig0021333:+79793 None:intergenic
GTTTGAGTTGAGAAGGCAAT+TGG 0.493292 tig0021333:+82984 None:intergenic
AAATTTGAGATGTGGGGAGA+TGG 0.493691 tig0021333:-81176 Msa1390310:CDS
TGCCGCTGATATGGGTGGAA+TGG 0.494921 tig0021333:-81916 Msa1390310:CDS
GGTCATGGATAACTGCTTAA+CGG 0.498357 tig0021333:-81970 Msa1390310:CDS
TAAATCCGATTTCCGCGAGC+CGG 0.501210 tig0021333:-80708 Msa1390310:CDS
GATATTAGTGTATGTAGTGC+CGG 0.507850 tig0021333:-79812 Msa1390310:three_prime_UTR
TACAGACAAATTTGAGATGT+GGG 0.508195 tig0021333:-81183 Msa1390310:CDS
GGCTCCAACAATGAAGTTGA+AGG 0.508928 tig0021333:-80528 Msa1390310:intron
ATTACATTATTGCTTCTGAC+TGG 0.512162 tig0021333:-82055 Msa1390310:CDS
GATTAAGGAACAACTTGAAA+GGG 0.521122 tig0021333:-80264 Msa1390310:CDS
TGAGTTGAGAAGGCAATTGG+TGG 0.526061 tig0021333:+82987 None:intergenic
CGGTCCAATTAGGCTCACTT+CGG 0.527001 tig0021333:-80178 Msa1390310:CDS
GCTCAAGGTCTTGATACATC+AGG 0.527626 tig0021333:-80236 Msa1390310:CDS
TGAAATTGATACTTGAACAG+AGG 0.529012 tig0021333:+79699 None:intergenic
ATACCTTTCCATGTTCCAAA+AGG 0.529802 tig0021333:+81371 None:intergenic
AATCGCGAACAAACCTCAGC+AGG 0.536092 tig0021333:+81589 None:intergenic
TAATAAAAGAGAAACTTGGC+TGG 0.537272 tig0021333:-80550 Msa1390310:CDS
TGCTTTGTCATACAGGTGGA+AGG 0.539745 tig0021333:-81247 Msa1390310:intron
CAGCGGCAAGATTGAAAACA+TGG 0.540286 tig0021333:+81931 None:intergenic
ATTGATGTGATGATAATGTA+TGG 0.541937 tig0021333:+82947 None:intergenic
AATTTCCATCACTGGTGCTG+GGG 0.543928 tig0021333:-82123 Msa1390310:CDS
TCTTGTTGATCTCAGGGTCA+TGG 0.544557 tig0021333:-81985 Msa1390310:CDS
ATTCCATCTTGTTGATCTCA+GGG 0.549458 tig0021333:-81991 Msa1390310:CDS
CTGCTTAACGGTTACTAAAG+GGG 0.550109 tig0021333:-81958 Msa1390310:CDS
TTCAACACACTCATCAATGA+AGG 0.550166 tig0021333:+81133 None:intergenic
GTTTAGCCACAAGATGCGTA+TGG 0.550376 tig0021333:-81488 Msa1390310:intron
CTTAGCGCGGCGTCTCAAGA+AGG 0.553238 tig0021333:-82084 Msa1390310:CDS
GGCTCACTTCGGGCAGCAGA+CGG 0.553347 tig0021333:-80167 Msa1390310:CDS
TCAATATGATTGAAGCTGCT+AGG 0.554345 tig0021333:-81839 Msa1390310:CDS
CGAAGTGAGCCTAATTGGAC+CGG 0.556358 tig0021333:+80179 None:intergenic
TGGTATTGTAGGATGGGCTG+AGG 0.562487 tig0021333:-80301 Msa1390310:intron
TCATACAGGTGGAAGGGAGA+AGG 0.564053 tig0021333:-81240 Msa1390310:intron
GCTCAATAGGGTCGATGTCA+TGG 0.565109 tig0021333:-80071 Msa1390310:three_prime_UTR
GGATTAAGGAACAACTTGAA+AGG 0.565415 tig0021333:-80265 Msa1390310:CDS
GTCTGATGCATGGCCTGCTG+AGG 0.565899 tig0021333:-81602 Msa1390310:intron
ATTTCCATCACTGGTGCTGG+GGG 0.574182 tig0021333:-82122 Msa1390310:CDS
GGTCTTGATACATCAGGATA+CGG 0.574577 tig0021333:-80230 Msa1390310:CDS
GAAATTGATACTTGAACAGA+GGG 0.577472 tig0021333:+79700 None:intergenic
CACAACTGTGGAAGTAACAA+TGG 0.578205 tig0021333:+79740 None:intergenic
CTTGAAAGGGAGAAGGCTCA+AGG 0.580968 tig0021333:-80251 Msa1390310:CDS
TACGACCACGAACACCCTCT+GGG 0.582303 tig0021333:+80588 None:intergenic
GCTAGAGAAGCTTGCAACAG+AGG 0.582464 tig0021333:-81465 Msa1390310:CDS
GAATTGAGTGCCGCATTGGG+AGG 0.584070 tig0021333:-81412 Msa1390310:CDS
ACACTAATAAAAGAGAAACT+TGG 0.584612 tig0021333:-80554 Msa1390310:CDS
AGTGTGTTGAAGGTGTACTT+AGG 0.590072 tig0021333:-81121 Msa1390310:intron
ATGAAAAGCTTGTCTTTGTG+TGG 0.590202 tig0021333:-83128 Msa1390310:five_prime_UTR
AGGATACGGCTCATCAAAAG+TGG 0.590362 tig0021333:-80216 Msa1390310:CDS
TTATCGCGTCGCACTTAGCG+CGG 0.590377 tig0021333:-82097 Msa1390310:CDS
AATCTTGCCGCTGATATGGG+TGG 0.591075 tig0021333:-81921 Msa1390310:CDS
AGCGCGGCGTCTCAAGAAGG+AGG 0.592364 tig0021333:-82081 Msa1390310:CDS
CATCACATTCCTGGCCCAGA+GGG 0.594287 tig0021333:-80602 Msa1390310:CDS
TTCCAATATTTACCGGCTCG+CGG 0.595261 tig0021333:+80696 None:intergenic
TGACCCTGAGATCAACAAGA+TGG 0.595396 tig0021333:+81988 None:intergenic
TTTAGCCACAAGATGCGTAT+GGG 0.596572 tig0021333:-81487 Msa1390310:intron
CTACAGACAAATTTGAGATG+TGG 0.598727 tig0021333:-81184 Msa1390310:CDS
AATAAAAGAGAAACTTGGCT+GGG 0.602593 tig0021333:-80549 Msa1390310:CDS
GCTTTGTCATACAGGTGGAA+GGG 0.602719 tig0021333:-81246 Msa1390310:intron
AAGCACTTGTCGGTGCTTGG+GGG 0.603889 tig0021333:-79969 Msa1390310:three_prime_UTR
ATTGAACTTCATAAATCATG+AGG 0.605744 tig0021333:+79868 None:intergenic
ATATATACGACGAGAAGGGA+AGG 0.606034 tig0021333:+83037 None:intergenic
CTAGCAAAATAACGAACAAG+TGG 0.606439 tig0021333:-83060 Msa1390310:five_prime_UTR
AGTGGTGCAAACCCAAGCAC+CGG 0.611968 tig0021333:-80198 Msa1390310:CDS
AAATATTGGAAGTGATGAGA+TGG 0.614662 tig0021333:-80684 Msa1390310:CDS
TCTAGCCCATACGCATCTTG+TGG 0.616959 tig0021333:+81482 None:intergenic
GGAACAACTTGAAAGGGAGA+AGG 0.619660 tig0021333:-80258 Msa1390310:CDS
ATATATATATACGACGAGAA+GGG 0.644799 tig0021333:+83033 None:intergenic
TATCTAAAATCACACAACTG+TGG 0.645712 tig0021333:+79728 None:intergenic
GCTTGAAGGAGTCTGATGCA+TGG 0.646402 tig0021333:-81612 Msa1390310:CDS
TGATAATGTATGGAGAGAAG+AGG 0.646893 tig0021333:+82957 None:intergenic
ACCCATTCCACCCATATCAG+CGG 0.650854 tig0021333:+81914 None:intergenic
GCGCGGCGTCTCAAGAAGGA+GGG 0.659404 tig0021333:-82080 Msa1390310:CDS
ACAGACAAATTTGAGATGTG+GGG 0.667327 tig0021333:-81182 Msa1390310:CDS
ACATCACATTCCTGGCCCAG+AGG 0.671457 tig0021333:-80603 Msa1390310:CDS
AGGGTAGATACAAGCACTTG+AGG 0.678133 tig0021333:+81666 None:intergenic
GATGGTCAGCATGAATGAGA+TGG 0.684833 tig0021333:-80666 Msa1390310:CDS
TGTTATGGAACCTCCCAATG+CGG 0.724863 tig0021333:+81402 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAAAAAAGAGAAATTG+AGG + tig0021333:79933-79952 None:intergenic 15.0%
!! TATTATCGATAATAATATTG+CGG - tig0021333:80002-80021 Msa1390310:three_prime_UTR 15.0%
!!! CAATTTTTTGACTAAAATTT+TGG + tig0021333:80265-80284 None:intergenic 15.0%
!!! TTTATTTTTACATTAAGCTT+GGG - tig0021333:81307-81326 Msa1390310:intron 15.0%
!!! TTAGTAGATGTTTTTAATTT+TGG - tig0021333:81548-81567 Msa1390310:intron 15.0%
!!! TAATAAGTTTTTATCCAATT+TGG - tig0021333:82372-82391 Msa1390310:intron 15.0%
!! TTCATTAACCTAATGTAAAA+CGG - tig0021333:80061-80080 Msa1390310:three_prime_UTR 20.0%
!!! TGACTAAAATTTTGGTTTTT+AGG + tig0021333:80257-80276 None:intergenic 20.0%
!! TAAGTACAACTCAAATTAAA+AGG + tig0021333:80403-80422 None:intergenic 20.0%
!! ATGGTTGACAAAAATAAATA+GGG + tig0021333:80457-80476 None:intergenic 20.0%
!! TATGGTTGACAAAAATAAAT+AGG + tig0021333:80458-80477 None:intergenic 20.0%
!! TGAAAACAATTAATTCACTA+TGG + tig0021333:80476-80495 None:intergenic 20.0%
!!! TTCAATTAAGACCAATTTTT+TGG - tig0021333:80603-80622 Msa1390310:CDS 20.0%
!! ATACATAATAACAGAATGAT+TGG + tig0021333:80966-80985 None:intergenic 20.0%
!! CAAAATCACTAATATTTGTT+CGG + tig0021333:81084-81103 None:intergenic 20.0%
!! TTTCTAACTGTTTAAATTCA+GGG + tig0021333:81200-81219 None:intergenic 20.0%
!!! CTTTATTTTTACATTAAGCT+TGG - tig0021333:81306-81325 Msa1390310:intron 20.0%
!!! GAATTATAATTTTGAGCTTA+TGG - tig0021333:81818-81837 Msa1390310:intron 20.0%
!!! ATAATTTTAGTATCCGTAAT+TGG - tig0021333:82003-82022 Msa1390310:CDS 20.0%
!! ATTCATTAAAGTCAAACAAT+AGG + tig0021333:82481-82500 None:intergenic 20.0%
!! TGACTTTAATGAATATTCAA+AGG - tig0021333:82487-82506 Msa1390310:intron 20.0%
!! GACTTTAATGAATATTCAAA+GGG - tig0021333:82488-82507 Msa1390310:intron 20.0%
!! TTTATGAAGTTCAATGTAAT+TGG - tig0021333:82984-83003 Msa1390310:five_prime_UTR 20.0%
!! GCTGAAATAATAAATATATC+CGG + tig0021333:83054-83073 None:intergenic 20.0%
! ACACATATAGATAGCATAAT+TGG + tig0021333:79761-79780 None:intergenic 25.0%
! ATATATATATACGACGAGAA+GGG + tig0021333:79814-79833 None:intergenic 25.0%
! TATATATATATACGACGAGA+AGG + tig0021333:79815-79834 None:intergenic 25.0%
!! ATTGATGTGATGATAATGTA+TGG + tig0021333:79900-79919 None:intergenic 25.0%
! GATAATAATATTGCGGTTTA+GGG - tig0021333:80009-80028 Msa1390310:three_prime_UTR 25.0%
! GTTTAACCTTTGAATTATCA+AGG - tig0021333:80031-80050 Msa1390310:three_prime_UTR 25.0%
! TCATTAACCTAATGTAAAAC+GGG - tig0021333:80062-80081 Msa1390310:three_prime_UTR 25.0%
!!! TTATCACTGCTATTTTATAC+TGG - tig0021333:80182-80201 Msa1390310:CDS 25.0%
!! GAAATTTTAAGCTTTTCTGA+TGG + tig0021333:80707-80726 None:intergenic 25.0%
! ACTAATATTTGTTCGGTTAT+AGG + tig0021333:81077-81096 None:intergenic 25.0%
!! AAACAAACATTTTTCGCAAT+TGG + tig0021333:81142-81161 None:intergenic 25.0%
! GTTTCTAACTGTTTAAATTC+AGG + tig0021333:81201-81220 None:intergenic 25.0%
!!! CATCTACTAATTTGCTTATT+CGG + tig0021333:81538-81557 None:intergenic 25.0%
! AAAAAACACATGAATAAAGC+TGG + tig0021333:81781-81800 None:intergenic 25.0%
! ACATGAAAAGTTTGGTTAAA+TGG + tig0021333:81868-81887 None:intergenic 25.0%
! ACACTAATAAAAGAGAAACT+TGG - tig0021333:82290-82309 Msa1390310:intron 25.0%
! TTATTAAGACACAAGAAAGA+AGG + tig0021333:82358-82377 None:intergenic 25.0%
!!! GAAAGTGTAATGGAATTTTT+AGG - tig0021333:82413-82432 Msa1390310:intron 25.0%
! TTAAAGTCAAACAATAGGAA+AGG + tig0021333:82476-82495 None:intergenic 25.0%
! TATCTAAATTCTGGTATTGT+AGG - tig0021333:82532-82551 Msa1390310:intron 25.0%
! CTTTATATTACAGCTCAATA+GGG - tig0021333:82761-82780 Msa1390310:intron 25.0%
! TGAAAATACATTGAGCAATA+AGG + tig0021333:82839-82858 None:intergenic 25.0%
!!! TTGTTTTTAGTCTCAATTTG+TGG - tig0021333:82928-82947 Msa1390310:intron 25.0%
! ATTGAACTTCATAAATCATG+AGG + tig0021333:82979-82998 None:intergenic 25.0%
ACATTATCATCACATCAATC+AGG - tig0021333:79901-79920 Msa1390310:three_prime_UTR 30.0%
CGATAATAATATTGCGGTTT+AGG - tig0021333:80008-80027 Msa1390310:three_prime_UTR 30.0%
! ACAGATCCTTGATAATTCAA+AGG + tig0021333:80040-80059 None:intergenic 30.0%
! TAGTAAACCCGTTTTACATT+AGG + tig0021333:80072-80091 None:intergenic 30.0%
! AGTACTGGAAAAACTAACTA+TGG - tig0021333:80641-80660 Msa1390310:CDS 30.0%
AAGCTTAAAATTTCCATCAC+TGG - tig0021333:80713-80732 Msa1390310:CDS 30.0%
ATTACATTATTGCTTCTGAC+TGG - tig0021333:80789-80808 Msa1390310:intron 30.0%
CTAGGATTAATGGAATTAAG+AGG - tig0021333:81023-81042 Msa1390310:intron 30.0%
! TATCTGACACATCATGTTTT+TGG - tig0021333:81050-81069 Msa1390310:intron 30.0%
!! GCGAAAAATGTTTGTTTTTC+AGG - tig0021333:81145-81164 Msa1390310:CDS 30.0%
AAATGCATCAAACAACCAAA+AGG + tig0021333:81281-81300 None:intergenic 30.0%
! TTTGGTTGTTTGATGCATTT+TGG - tig0021333:81281-81300 Msa1390310:intron 30.0%
AAGCACTACAACAAAGATTT+CGG - tig0021333:81410-81429 Msa1390310:CDS 30.0%
CAAAAGGACCATATATGTTA+TGG + tig0021333:81460-81479 None:intergenic 30.0%
! CATAACATATATGGTCCTTT+TGG - tig0021333:81458-81477 Msa1390310:CDS 30.0%
AAGCAACAAACTCATTACAT+CGG + tig0021333:81582-81601 None:intergenic 30.0%
! TACAGACAAATTTGAGATGT+GGG - tig0021333:81661-81680 Msa1390310:CDS 30.0%
ATTGCATAAATGACATTGAG+AGG - tig0021333:81965-81984 Msa1390310:CDS 30.0%
! TTTTAGTATCCGTAATTGGT+TGG - tig0021333:82007-82026 Msa1390310:CDS 30.0%
TTTAGTATCCGTAATTGGTT+GGG - tig0021333:82008-82027 Msa1390310:CDS 30.0%
TCATCACTTCCAATATTTAC+CGG + tig0021333:82158-82177 None:intergenic 30.0%
AAATATTGGAAGTGATGAGA+TGG - tig0021333:82160-82179 Msa1390310:CDS 30.0%
TAATAAAAGAGAAACTTGGC+TGG - tig0021333:82294-82313 Msa1390310:intron 30.0%
AATAAAAGAGAAACTTGGCT+GGG - tig0021333:82295-82314 Msa1390310:intron 30.0%
TATACCTTCAACTTCATTGT+TGG + tig0021333:82323-82342 None:intergenic 30.0%
! TCTTCTTTCAGAAAGTGTAA+TGG - tig0021333:82403-82422 Msa1390310:intron 30.0%
TTACAGCAGTATCTAAATTC+TGG - tig0021333:82523-82542 Msa1390310:intron 30.0%
TAAATTCTGGTATTGTAGGA+TGG - tig0021333:82536-82555 Msa1390310:intron 30.0%
AAATTCTGGTATTGTAGGAT+GGG - tig0021333:82537-82556 Msa1390310:intron 30.0%
GATTACATATGTCTGGATTA+AGG - tig0021333:82565-82584 Msa1390310:intron 30.0%
GATTAAGGAACAACTTGAAA+GGG - tig0021333:82580-82599 Msa1390310:intron 30.0%
CAAAGAGAGTAGTTAATTCA+TGG - tig0021333:82700-82719 Msa1390310:intron 30.0%
GCTTTATATTACAGCTCAAT+AGG - tig0021333:82760-82779 Msa1390310:intron 30.0%
!!! ACCTTTTTTAAAGCACTTGT+CGG - tig0021333:82865-82884 Msa1390310:intron 30.0%
! TATCTAAAATCACACAACTG+TGG + tig0021333:83119-83138 None:intergenic 30.0%
ATGAAAAGCTTGTCTTTGTG+TGG - tig0021333:79716-79735 Msa1390310:three_prime_UTR 35.0%
CTAGCAAAATAACGAACAAG+TGG - tig0021333:79784-79803 Msa1390310:three_prime_UTR 35.0%
! TGATAATGTATGGAGAGAAG+AGG + tig0021333:79890-79909 None:intergenic 35.0%
GCATAGACAATTGATATGCT+AGG + tig0021333:80381-80400 None:intergenic 35.0%
GAATGCAATACAACACATGA+AGG + tig0021333:80541-80560 None:intergenic 35.0%
ATCCTGCAGAACCAAAAAAT+TGG + tig0021333:80617-80636 None:intergenic 35.0%
!!! AATTTTTTGGTTCTGCAGGA+TGG - tig0021333:80616-80635 Msa1390310:CDS 35.0%
!!! ATTTTTTGGTTCTGCAGGAT+GGG - tig0021333:80617-80636 Msa1390310:CDS 35.0%
AATTCCATCTTGTTGATCTC+AGG - tig0021333:80852-80871 Msa1390310:intron 35.0%
ATTCCATCTTGTTGATCTCA+GGG - tig0021333:80853-80872 Msa1390310:intron 35.0%
AACTGCTTAACGGTTACTAA+AGG - tig0021333:80884-80903 Msa1390310:intron 35.0%
ACTGCTTAACGGTTACTAAA+GGG - tig0021333:80885-80904 Msa1390310:intron 35.0%
TCAATATGATTGAAGCTGCT+AGG - tig0021333:81005-81024 Msa1390310:intron 35.0%
ATTGAAGCTGCTAGGATTAA+TGG - tig0021333:81013-81032 Msa1390310:intron 35.0%
AACTACTAATGTCAGCTTGA+AGG - tig0021333:81218-81237 Msa1390310:CDS 35.0%
!!! TATATGGTCCTTTTGGAACA+TGG - tig0021333:81465-81484 Msa1390310:CDS 35.0%
ATACCTTTCCATGTTCCAAA+AGG + tig0021333:81476-81495 None:intergenic 35.0%
!! AGTTTGTTGCTTTGTCATAC+AGG - tig0021333:81590-81609 Msa1390310:intron 35.0%
! CTACAGACAAATTTGAGATG+TGG - tig0021333:81660-81679 Msa1390310:CDS 35.0%
! ACAGACAAATTTGAGATGTG+GGG - tig0021333:81662-81681 Msa1390310:CDS 35.0%
TTCAACACACTCATCAATGA+AGG + tig0021333:81714-81733 None:intergenic 35.0%
TTCATTGATGAGTGTGTTGA+AGG - tig0021333:81713-81732 Msa1390310:intron 35.0%
CAGCTCAAACATGAAAAGTT+TGG + tig0021333:81876-81895 None:intergenic 35.0%
TTCATGTTTGAGCTGTTCTA+AGG - tig0021333:81881-81900 Msa1390310:CDS 35.0%
TCATGTTTGAGCTGTTCTAA+GGG - tig0021333:81882-81901 Msa1390310:CDS 35.0%
TTGGGATAGGGAAAATGATA+CGG - tig0021333:82026-82045 Msa1390310:CDS 35.0%
TATGATAAGCCCTGACAATT+TGG - tig0021333:82090-82109 Msa1390310:CDS 35.0%
AACAACAGACCAAATTGTCA+GGG + tig0021333:82102-82121 None:intergenic 35.0%
TAACAACAGACCAAATTGTC+AGG + tig0021333:82103-82122 None:intergenic 35.0%
TAAGACACAAGAAAGAAGGA+AGG + tig0021333:82354-82373 None:intergenic 35.0%
! CACTTTCTGAAAGAAGATGA+AGG + tig0021333:82400-82419 None:intergenic 35.0%
GGATTAAGGAACAACTTGAA+AGG - tig0021333:82579-82598 Msa1390310:intron 35.0%
AGCAGTGAAGTAAATGTTTC+CGG - tig0021333:82727-82746 Msa1390310:intron 35.0%
ATATAAAGCACACTCTTCTC+CGG + tig0021333:82749-82768 None:intergenic 35.0%
CACGTTATTTATGCGTAGAT+CGG - tig0021333:82810-82829 Msa1390310:intron 35.0%
!! ACCGACAAGTGCTTTAAAAA+AGG + tig0021333:82869-82888 None:intergenic 35.0%
GATATTAGTGTATGTAGTGC+CGG - tig0021333:83032-83051 Msa1390310:five_prime_UTR 35.0%
TGTCTTTGTGTGGAAGTAGA+TGG - tig0021333:79726-79745 Msa1390310:three_prime_UTR 40.0%
ATATATACGACGAGAAGGGA+AGG + tig0021333:79810-79829 None:intergenic 40.0%
!! GTTTGAGTTGAGAAGGCAAT+TGG + tig0021333:79863-79882 None:intergenic 40.0%
!! AGGTTTGGTTTGAGTTGAGA+AGG + tig0021333:79870-79889 None:intergenic 40.0%
ATGTATGGAGAGAAGAGGTT+TGG + tig0021333:79885-79904 None:intergenic 40.0%
CAATTGATATGCTAGGACGT+AGG + tig0021333:80374-80393 None:intergenic 40.0%
! ATACAACACATGAAGGCACA+TGG + tig0021333:80534-80553 None:intergenic 40.0%
!!! GACCAATTTTTTGGTTCTGC+AGG - tig0021333:80612-80631 Msa1390310:CDS 40.0%
CTCTCTCTCAAGATTCTCAT+AGG + tig0021333:80675-80694 None:intergenic 40.0%
AAAATTTCCATCACTGGTGC+TGG - tig0021333:80719-80738 Msa1390310:intron 40.0%
AAATTTCCATCACTGGTGCT+GGG - tig0021333:80720-80739 Msa1390310:intron 40.0%
GAAAAATGAGCACATGACTG+AGG - tig0021333:80814-80833 Msa1390310:intron 40.0%
GGTCATGGATAACTGCTTAA+CGG - tig0021333:80874-80893 Msa1390310:intron 40.0%
CTGCTTAACGGTTACTAAAG+GGG - tig0021333:80886-80905 Msa1390310:intron 40.0%
TTTCAATCTTGCCGCTGATA+TGG - tig0021333:80919-80938 Msa1390310:intron 40.0%
TTCAATCTTGCCGCTGATAT+GGG - tig0021333:80920-80939 Msa1390310:intron 40.0%
TTTAGCCACAAGATGCGTAT+GGG - tig0021333:81357-81376 Msa1390310:intron 40.0%
GGGAGGTTCCATAACATATA+TGG - tig0021333:81449-81468 Msa1390310:CDS 40.0%
!! TTGTTGCTTTGTCATACAGG+TGG - tig0021333:81593-81612 Msa1390310:intron 40.0%
! AAATTTGAGATGTGGGGAGA+TGG - tig0021333:81668-81687 Msa1390310:CDS 40.0%
! AGTGTGTTGAAGGTGTACTT+AGG - tig0021333:81723-81742 Msa1390310:intron 40.0%
! TGTTGAAGGTGTACTTAGGT+AGG - tig0021333:81727-81746 Msa1390310:intron 40.0%
TCTTGGCTGATTGTTTGGTT+TGG - tig0021333:81750-81769 Msa1390310:intron 40.0%
! TGTTGATTGAGTGAGCTAAC+TGG + tig0021333:81943-81962 None:intergenic 40.0%
TATCCGTAATTGGTTGGGAT+AGG - tig0021333:82013-82032 Msa1390310:CDS 40.0%
ATCCGTAATTGGTTGGGATA+GGG - tig0021333:82014-82033 Msa1390310:CDS 40.0%
TTCCCTATCCCAACCAATTA+CGG + tig0021333:82019-82038 None:intergenic 40.0%
!!! TGAGATCGTTCTTGGTTTTG+AGG - tig0021333:82202-82221 Msa1390310:CDS 40.0%
ACTCCTATACATCACATTCC+TGG - tig0021333:82233-82252 Msa1390310:intron 40.0%
AGAAGATGAAGGAGCCAAAT+TGG + tig0021333:82389-82408 None:intergenic 40.0%
GGTCTTGATACATCAGGATA+CGG - tig0021333:82614-82633 Msa1390310:intron 40.0%
CACAACTGTGGAAGTAACAA+TGG + tig0021333:83107-83126 None:intergenic 40.0%
! TGAGTTGAGAAGGCAATTGG+TGG + tig0021333:79860-79879 None:intergenic 45.0%
ACACACCAAGTGCAGATAAG+TGG - tig0021333:80332-80351 Msa1390310:intron 45.0%
CACACCAAGTGCAGATAAGT+GGG - tig0021333:80333-80352 Msa1390310:intron 45.0%
ACACCAAGTGCAGATAAGTG+GGG - tig0021333:80334-80353 Msa1390310:intron 45.0%
ATTCCCCACTTATCTGCACT+TGG + tig0021333:80340-80359 None:intergenic 45.0%
ATCTTGAGAGAGAGCCTTAC+TGG - tig0021333:80681-80700 Msa1390310:CDS 45.0%
! AGCTTTTCTGATGGCCAGTA+AGG + tig0021333:80698-80717 None:intergenic 45.0%
! AATTTCCATCACTGGTGCTG+GGG - tig0021333:80721-80740 Msa1390310:intron 45.0%
TGACCCTGAGATCAACAAGA+TGG + tig0021333:80859-80878 None:intergenic 45.0%
TCTTGTTGATCTCAGGGTCA+TGG - tig0021333:80859-80878 Msa1390310:intron 45.0%
CAGCGGCAAGATTGAAAACA+TGG + tig0021333:80916-80935 None:intergenic 45.0%
AGGGTAGATACAAGCACTTG+AGG + tig0021333:81181-81200 None:intergenic 45.0%
!! GGTTTGTTCGCGATTCCTTT+TGG - tig0021333:81263-81282 Msa1390310:intron 45.0%
GTTTAGCCACAAGATGCGTA+TGG - tig0021333:81356-81375 Msa1390310:intron 45.0%
TGTTATGGAACCTCCCAATG+CGG + tig0021333:81445-81464 None:intergenic 45.0%
!!! GGTCCTTTTGGAACATGGAA+AGG - tig0021333:81470-81489 Msa1390310:CDS 45.0%
TGCTTTGTCATACAGGTGGA+AGG - tig0021333:81597-81616 Msa1390310:intron 45.0%
GCTTTGTCATACAGGTGGAA+GGG - tig0021333:81598-81617 Msa1390310:intron 45.0%
AGGTGTACTTAGGTAGGTCT+TGG - tig0021333:81733-81752 Msa1390310:intron 45.0%
GTAGGTCTTGGCTGATTGTT+TGG - tig0021333:81745-81764 Msa1390310:intron 45.0%
!! TTCCAATATTTACCGGCTCG+CGG + tig0021333:82151-82170 None:intergenic 45.0%
GATGGTCAGCATGAATGAGA+TGG - tig0021333:82178-82197 Msa1390310:CDS 45.0%
GGCTCCAACAATGAAGTTGA+AGG - tig0021333:82316-82335 Msa1390310:intron 45.0%
GGCTGAGGATTACATATGTC+TGG - tig0021333:82558-82577 Msa1390310:intron 45.0%
GGAACAACTTGAAAGGGAGA+AGG - tig0021333:82586-82605 Msa1390310:intron 45.0%
GCTCAAGGTCTTGATACATC+AGG - tig0021333:82608-82627 Msa1390310:intron 45.0%
AGGATACGGCTCATCAAAAG+TGG - tig0021333:82628-82647 Msa1390310:intron 45.0%
! TTAAAGCACTTGTCGGTGCT+TGG - tig0021333:82872-82891 Msa1390310:intron 45.0%
! TAAAGCACTTGTCGGTGCTT+GGG - tig0021333:82873-82892 Msa1390310:intron 45.0%
! CAACACATGAAGGCACATGG+TGG + tig0021333:80531-80550 None:intergenic 50.0%
! TTCTGCAGGATGGGAAGTAC+TGG - tig0021333:80626-80645 Msa1390310:CDS 50.0%
! ATTTCCATCACTGGTGCTGG+GGG - tig0021333:80722-80741 Msa1390310:intron 50.0%
AATCTTGCCGCTGATATGGG+TGG - tig0021333:80923-80942 Msa1390310:intron 50.0%
ACCCATTCCACCCATATCAG+CGG + tig0021333:80933-80952 None:intergenic 50.0%
GCTTGAAGGAGTCTGATGCA+TGG - tig0021333:81232-81251 Msa1390310:CDS 50.0%
AATCGCGAACAAACCTCAGC+AGG + tig0021333:81258-81277 None:intergenic 50.0%
TCTAGCCCATACGCATCTTG+TGG + tig0021333:81365-81384 None:intergenic 50.0%
GCTAGAGAAGCTTGCAACAG+AGG - tig0021333:81379-81398 Msa1390310:CDS 50.0%
! TTCGGAATTGAGTGCCGCAT+TGG - tig0021333:81428-81447 Msa1390310:CDS 50.0%
! TCGGAATTGAGTGCCGCATT+GGG - tig0021333:81429-81448 Msa1390310:CDS 50.0%
TCATACAGGTGGAAGGGAGA+AGG - tig0021333:81604-81623 Msa1390310:CDS 50.0%
!!! AGGCTCCTGCTGCTTTTTGT+CGG - tig0021333:81624-81643 Msa1390310:CDS 50.0%
GCTTTCCGACAAAAAGCAGC+AGG + tig0021333:81632-81651 None:intergenic 50.0%
TAAATCCGATTTCCGCGAGC+CGG - tig0021333:82136-82155 Msa1390310:CDS 50.0%
!! ATTTACCGGCTCGCGGAAAT+CGG + tig0021333:82144-82163 None:intergenic 50.0%
TTCCGCGAGCCGGTAAATAT+TGG - tig0021333:82146-82165 Msa1390310:CDS 50.0%
GAGATGGCTGAGATCGTTCT+TGG - tig0021333:82194-82213 Msa1390310:CDS 50.0%
GGGCCAGGAATGTGATGTAT+AGG + tig0021333:82239-82258 None:intergenic 50.0%
!! TGGTATTGTAGGATGGGCTG+AGG - tig0021333:82543-82562 Msa1390310:intron 50.0%
CTTGAAAGGGAGAAGGCTCA+AGG - tig0021333:82593-82612 Msa1390310:intron 50.0%
CGAAGTGAGCCTAATTGGAC+CGG + tig0021333:82668-82687 None:intergenic 50.0%
CGGTCCAATTAGGCTCACTT+CGG - tig0021333:82666-82685 Msa1390310:intron 50.0%
GGTCCAATTAGGCTCACTTC+GGG - tig0021333:82667-82686 Msa1390310:intron 50.0%
GCTCAATAGGGTCGATGTCA+TGG - tig0021333:82773-82792 Msa1390310:intron 50.0%
! AAAGCACTTGTCGGTGCTTG+GGG - tig0021333:82874-82893 Msa1390310:intron 50.0%
AAAACCCCCAGCACCAGTGA+TGG + tig0021333:80729-80748 None:intergenic 55.0%
TTATCGCGTCGCACTTAGCG+CGG - tig0021333:80747-80766 Msa1390310:intron 55.0%
TGCCGCTGATATGGGTGGAA+TGG - tig0021333:80928-80947 Msa1390310:intron 55.0%
GCCGCTGATATGGGTGGAAT+GGG - tig0021333:80929-80948 Msa1390310:intron 55.0%
! GAATTGAGTGCCGCATTGGG+AGG - tig0021333:81432-81451 Msa1390310:CDS 55.0%
ACATCACATTCCTGGCCCAG+AGG - tig0021333:82241-82260 Msa1390310:intron 55.0%
CATCACATTCCTGGCCCAGA+GGG - tig0021333:82242-82261 Msa1390310:intron 55.0%
TACGACCACGAACACCCTCT+GGG + tig0021333:82259-82278 None:intergenic 55.0%
TTACGACCACGAACACCCTC+TGG + tig0021333:82260-82279 None:intergenic 55.0%
AGTGGTGCAAACCCAAGCAC+CGG - tig0021333:82646-82665 Msa1390310:intron 55.0%
!! ACCCAAGCACCGGTCCAATT+AGG - tig0021333:82656-82675 Msa1390310:intron 55.0%
GCCTAATTGGACCGGTGCTT+GGG + tig0021333:82660-82679 None:intergenic 55.0%
AGCCTAATTGGACCGGTGCT+TGG + tig0021333:82661-82680 None:intergenic 55.0%
CTGCCCGAAGTGAGCCTAAT+TGG + tig0021333:82673-82692 None:intergenic 55.0%
! AAGCACTTGTCGGTGCTTGG+GGG - tig0021333:82875-82894 Msa1390310:intron 55.0%
CTTAGCGCGGCGTCTCAAGA+AGG - tig0021333:80760-80779 Msa1390310:intron 60.0%
GTCTGATGCATGGCCTGCTG+AGG - tig0021333:81242-81261 Msa1390310:intron 60.0%
AGCGCGGCGTCTCAAGAAGG+AGG - tig0021333:80763-80782 Msa1390310:intron 65.0%
GCGCGGCGTCTCAAGAAGGA+GGG - tig0021333:80764-80783 Msa1390310:intron 65.0%
GGCTCACTTCGGGCAGCAGA+CGG - tig0021333:82677-82696 Msa1390310:intron 65.0%
! CACTTGTCGGTGCTTGGGGG+TGG - tig0021333:82878-82897 Msa1390310:intron 65.0%
CCACGAACACCCTCTGGGCC+AGG + tig0021333:82254-82273 None:intergenic 70.0%
!! CCTGGCCCAGAGGGTGTTCG+TGG - tig0021333:82251-82270 Msa1390310:intron 70.0%
Chromosome Type Strat End Strand Name
tig0021333 gene 79705 83161 79705 ID=Msa1390310;Name=Msa1390310
tig0021333 mRNA 79705 83161 79705 ID=Msa1390310-mRNA-1;Parent=Msa1390310;Name=Msa1390310-mRNA-1;_AED=0.08;_eAED=0.08;_QI=219|1|1|1|0.83|0.85|7|446|379
tig0021333 exon 79705 80312 79705 ID=Msa1390310-mRNA-1:exon:12144;Parent=Msa1390310-mRNA-1
tig0021333 exon 80529 80736 80529 ID=Msa1390310-mRNA-1:exon:12143;Parent=Msa1390310-mRNA-1
tig0021333 exon 81122 81254 81122 ID=Msa1390310-mRNA-1:exon:12142;Parent=Msa1390310-mRNA-1
tig0021333 exon 81375 81504 81375 ID=Msa1390310-mRNA-1:exon:12141;Parent=Msa1390310-mRNA-1
tig0021333 exon 81603 81699 81603 ID=Msa1390310-mRNA-1:exon:12140;Parent=Msa1390310-mRNA-1
tig0021333 exon 81822 82232 81822 ID=Msa1390310-mRNA-1:exon:12139;Parent=Msa1390310-mRNA-1
tig0021333 exon 82944 83161 82944 ID=Msa1390310-mRNA-1:exon:12138;Parent=Msa1390310-mRNA-1
tig0021333 five_prime_UTR 82944 83161 82944 ID=Msa1390310-mRNA-1:five_prime_utr;Parent=Msa1390310-mRNA-1
tig0021333 five_prime_UTR 82232 82232 82232 ID=Msa1390310-mRNA-1:five_prime_utr;Parent=Msa1390310-mRNA-1
tig0021333 CDS 81822 82231 81822 ID=Msa1390310-mRNA-1:cds;Parent=Msa1390310-mRNA-1
tig0021333 CDS 81603 81699 81603 ID=Msa1390310-mRNA-1:cds;Parent=Msa1390310-mRNA-1
tig0021333 CDS 81375 81504 81375 ID=Msa1390310-mRNA-1:cds;Parent=Msa1390310-mRNA-1
tig0021333 CDS 81122 81254 81122 ID=Msa1390310-mRNA-1:cds;Parent=Msa1390310-mRNA-1
tig0021333 CDS 80529 80736 80529 ID=Msa1390310-mRNA-1:cds;Parent=Msa1390310-mRNA-1
tig0021333 CDS 80151 80312 80151 ID=Msa1390310-mRNA-1:cds;Parent=Msa1390310-mRNA-1
tig0021333 three_prime_UTR 79705 80150 79705 ID=Msa1390310-mRNA-1:three_prime_utr;Parent=Msa1390310-mRNA-1
Gene Sequence

>Msa1390310

ATGGGAAGTACTGGAAAAACTAACTATGGAGAATACACCTATGAGAATCTTGAGAGAGAGCCTTACTGGCCATCAGAAAAGCTTAAAATTTCCATCACTGGTGCTGGGGGTTTTATCGCGTCGCACTTAGCGCGGCGTCTCAAGAAGGAGGGACATTACATTATTGCTTCTGACTGGAAGAAAAATGAGCACATGACTGAGGACATGTTCTGTGATGAATTCCATCTTGTTGATCTCAGGGTCATGGATAACTGCTTAACGGTTACTAAAGGGGTTGACCATGTTTTCAATCTTGCCGCTGATATGGGTGGAATGGGTTTTATTCAGTCCAATCATTCTGTTATTATGTATAACAACACAATGATTAGTTTCAATATGATTGAAGCTGCTAGGATTAATGGAATTAAGAGGTTCTTCTATGCCTCAAGTGCTTGTATCTACCCTGAATTTAAACAGTTAGAAACTACTAATGTCAGCTTGAAGGAGTCTGATGCATGGCCTGCTGAGCCACAAGATGCGTATGGGCTAGAGAAGCTTGCAACAGAGGAGATTTGCAAGCACTACAACAAAGATTTCGGAATTGAGTGCCGCATTGGGAGGTTCCATAACATATATGGTCCTTTTGGAACATGGAAAGGTGGAAGGGAGAAGGCTCCTGCTGCTTTTTGTCGGAAAGCAATCACGTCTACAGACAAATTTGAGATGTGGGGAGATGGTTTGCAAACACGATCATTTACCTTCATTGATGAGTGTGTTGAAGGTGTACTTAGACTGACTAAATCCGATTTCCGCGAGCCGGTAAATATTGGAAGTGATGAGATGGTCAGCATGAATGAGATGGCTGAGATCGTTCTTGGTTTTGAGGACAAGAAGACTCCTATACATCACATTCCTGGCCCAGAGGGTGTTCGTGGTCGTAATTCAGACAATACACTAATAAAAGAGAAACTTGGCTGGGCTCCAACAATGAAGTTGAAGGATGGGCTGAGGATTACATATGTCTGGATTAAGGAACAACTTGAAAGGGAGAAGGCTCAAGGTCTTGATACATCAGGATACGGCTCATCAAAAGTGGTGCAAACCCAAGCACCGGTCCAATTAGGCTCACTTCGGGCAGCAGACGGCAAAGAGAGTAGTTAA

Protein sequence

>Msa1390310

MGSTGKTNYGEYTYENLEREPYWPSEKLKISITGAGGFIASHLARRLKKEGHYIIASDWKKNEHMTEDMFCDEFHLVDLRVMDNCLTVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEEICKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFEDKKTPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRITYVWIKEQLEREKAQGLDTSGYGSSKVVQTQAPVQLGSLRAADGKESS*