Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100560 | AAP03088.1 | 56.563 | 320 | 119 | 7 | 6 | 322 | 4 | 306 | 1.15e-119 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100560 | sp|P06215|CHIT_PHAVU | 54.375 | 320 | 126 | 7 | 8 | 324 | 9 | 311 | 5.31e-116 | 341 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100560 | Q7X9F5 | 56.563 | 320 | 119 | 7 | 6 | 322 | 4 | 306 | 5.47e-120 | 358 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028280 | Msa1100560 | -0.802840 | 4.634951e-49 | -8.615850e-47 |
| Msa0036230 | Msa1100560 | 0.844147 | 9.051309e-59 | -8.615850e-47 |
| Msa0036580 | Msa1100560 | 0.846117 | 2.656979e-59 | -8.615850e-47 |
| Msa0048950 | Msa1100560 | 0.825423 | 4.725811e-54 | -8.615850e-47 |
| Msa0059880 | Msa1100560 | 0.806545 | 7.811138e-50 | -8.615850e-47 |
| Msa0061600 | Msa1100560 | 0.825066 | 5.739763e-54 | -8.615850e-47 |
| Msa0072030 | Msa1100560 | 0.803292 | 3.738025e-49 | -8.615850e-47 |
| Msa0084160 | Msa1100560 | 0.812942 | 3.288194e-51 | -8.615850e-47 |
| Msa0093530 | Msa1100560 | 0.809155 | 2.175778e-50 | -8.615850e-47 |
| Msa0106130 | Msa1100560 | 0.818507 | 1.890548e-52 | -8.615850e-47 |
| Msa0605480 | Msa1100560 | 0.817938 | 2.543150e-52 | -8.615850e-47 |
| Msa0611950 | Msa1100560 | 0.813674 | 2.270812e-51 | -8.615850e-47 |
| Msa0623750 | Msa1100560 | 0.822757 | 1.997211e-53 | -8.615850e-47 |
| Msa0629720 | Msa1100560 | 0.823802 | 1.138142e-53 | -8.615850e-47 |
| Msa0640290 | Msa1100560 | 0.802952 | 4.394366e-49 | -8.615850e-47 |
| Msa0645100 | Msa1100560 | 0.821309 | 4.323353e-53 | -8.615850e-47 |
| Msa0645120 | Msa1100560 | 0.830235 | 3.291503e-55 | -8.615850e-47 |
| Msa0646440 | Msa1100560 | 0.806023 | 1.005777e-49 | -8.615850e-47 |
| Msa0667600 | Msa1100560 | 0.815449 | 9.191582e-52 | -8.615850e-47 |
| Msa0667620 | Msa1100560 | 0.805995 | 1.019556e-49 | -8.615850e-47 |
| Msa0667640 | Msa1100560 | 0.814514 | 1.482212e-51 | -8.615850e-47 |
| Msa0668210 | Msa1100560 | 0.817824 | 2.698328e-52 | -8.615850e-47 |
| Msa0678620 | Msa1100560 | 0.807915 | 4.002647e-50 | -8.615850e-47 |
| Msa0682730 | Msa1100560 | 0.803645 | 3.157668e-49 | -8.615850e-47 |
| Msa0684590 | Msa1100560 | 0.815194 | 1.047380e-51 | -8.615850e-47 |
| Msa0684600 | Msa1100560 | 0.813064 | 3.092603e-51 | -8.615850e-47 |
| Msa0684720 | Msa1100560 | 0.827887 | 1.220348e-54 | -8.615850e-47 |
| Msa0716600 | Msa1100560 | 0.827136 | 1.848174e-54 | -8.615850e-47 |
| Msa0720660 | Msa1100560 | 0.800611 | 1.328605e-48 | -8.615850e-47 |
| Msa0727480 | Msa1100560 | 0.801612 | 8.295830e-49 | -8.615850e-47 |
| Msa0735280 | Msa1100560 | 0.820340 | 7.221778e-53 | -8.615850e-47 |
| Msa0757990 | Msa1100560 | 0.820421 | 6.919588e-53 | -8.615850e-47 |
| Msa0758000 | Msa1100560 | 0.803650 | 3.150038e-49 | -8.615850e-47 |
| Msa0758150 | Msa1100560 | 0.854551 | 1.141733e-61 | -8.615850e-47 |
| Msa0777250 | Msa1100560 | 0.811973 | 5.353839e-51 | -8.615850e-47 |
| Msa0782030 | Msa1100560 | -0.804822 | 1.796210e-49 | -8.615850e-47 |
| Msa0814230 | Msa1100560 | 0.818324 | 2.080344e-52 | -8.615850e-47 |
| Msa0817100 | Msa1100560 | 0.862409 | 5.172283e-64 | -8.615850e-47 |
| Msa0126960 | Msa1100560 | 0.811322 | 7.418820e-51 | -8.615850e-47 |
| Msa0135890 | Msa1100560 | 0.803676 | 3.111219e-49 | -8.615850e-47 |
| Msa0139270 | Msa1100560 | 0.842253 | 2.894718e-58 | -8.615850e-47 |
| Msa0150910 | Msa1100560 | 0.805471 | 1.314052e-49 | -8.615850e-47 |
| Msa0176620 | Msa1100560 | 0.846655 | 1.894595e-59 | -8.615850e-47 |
| Msa0197750 | Msa1100560 | 0.843403 | 1.431454e-58 | -8.615850e-47 |
| Msa0218060 | Msa1100560 | 0.834232 | 3.376579e-56 | -8.615850e-47 |
| Msa0225910 | Msa1100560 | 0.833626 | 4.788206e-56 | -8.615850e-47 |
| Msa0234120 | Msa1100560 | 0.814088 | 1.840373e-51 | -8.615850e-47 |
| Msa0379500 | Msa1100560 | -0.801469 | 8.874732e-49 | -8.615850e-47 |
| Msa0404180 | Msa1100560 | -0.809823 | 1.563811e-50 | -8.615850e-47 |
| Msa0453970 | Msa1100560 | 0.800101 | 1.687573e-48 | -8.615850e-47 |
| Msa0469550 | Msa1100560 | 0.802728 | 4.888493e-49 | -8.615850e-47 |
| Msa0985250 | Msa1100560 | 0.847177 | 1.363844e-59 | -8.615850e-47 |
| Msa0985260 | Msa1100560 | 0.803886 | 2.814671e-49 | -8.615850e-47 |
| Msa0985290 | Msa1100560 | 0.835197 | 1.930139e-56 | -8.615850e-47 |
| Msa0985700 | Msa1100560 | 0.810317 | 1.223910e-50 | -8.615850e-47 |
| Msa0996980 | Msa1100560 | 0.804404 | 2.195268e-49 | -8.615850e-47 |
| Msa1006940 | Msa1100560 | 0.858812 | 6.372247e-63 | -8.615850e-47 |
| Msa1007930 | Msa1100560 | 0.802572 | 5.263467e-49 | -8.615850e-47 |
| Msa1036020 | Msa1100560 | 0.823205 | 1.569914e-53 | -8.615850e-47 |
| Msa1040730 | Msa1100560 | 0.833883 | 4.127920e-56 | -8.615850e-47 |
| Msa1046220 | Msa1100560 | 0.803746 | 3.008640e-49 | -8.615850e-47 |
| Msa1061760 | Msa1100560 | 0.806550 | 7.790837e-50 | -8.615850e-47 |
| Msa1076280 | Msa1100560 | 0.803497 | 3.388697e-49 | -8.615850e-47 |
| Msa1083100 | Msa1100560 | 0.821759 | 3.403898e-53 | -8.615850e-47 |
| Msa1085560 | Msa1100560 | 0.810325 | 1.219457e-50 | -8.615850e-47 |
| Msa1100560 | Msa1112730 | 0.840066 | 1.087448e-57 | -8.615850e-47 |
| Msa1100560 | Msa1124440 | -0.800249 | 1.574372e-48 | -8.615850e-47 |
| Msa1100560 | Msa1127940 | 0.804933 | 1.703098e-49 | -8.615850e-47 |
| Msa1100560 | Msa1136050 | 0.872306 | 3.519772e-67 | -8.615850e-47 |
| Msa1100560 | Msa1136060 | 0.973314 | 3.213852e-136 | -8.615850e-47 |
| Msa1100560 | Msa1165860 | 0.812134 | 4.939667e-51 | -8.615850e-47 |
| Msa1100560 | Msa1179190 | 0.853643 | 2.087107e-61 | -8.615850e-47 |
| Msa1100560 | Msa1211390 | -0.800056 | 1.723357e-48 | -8.615850e-47 |
| Msa1100560 | Msa1216600 | 0.807463 | 4.993293e-50 | -8.615850e-47 |
| Msa1100560 | Msa1219780 | 0.847763 | 9.412484e-60 | -8.615850e-47 |
| Msa1100560 | Msa1220720 | 0.821176 | 4.641223e-53 | -8.615850e-47 |
| Msa1100560 | Msa1221170 | 0.821446 | 4.019681e-53 | -8.615850e-47 |
| Msa1100560 | Msa1222030 | 0.840763 | 7.147809e-58 | -8.615850e-47 |
| Msa1100560 | Msa1233620 | 0.843278 | 1.545698e-58 | -8.615850e-47 |
| Msa1100560 | Msa1255710 | 0.806066 | 9.852485e-50 | -8.615850e-47 |
| Msa1100560 | Msa1258100 | -0.809819 | 1.566986e-50 | -8.615850e-47 |
| Msa1100560 | Msa1265500 | 0.823988 | 1.029596e-53 | -8.615850e-47 |
| Msa1100560 | Msa1265570 | 0.810240 | 1.272103e-50 | -8.615850e-47 |
| Msa1100560 | Msa1266710 | 0.842980 | 1.856426e-58 | -8.615850e-47 |
| Msa1100560 | Msa1269050 | 0.826326 | 2.885040e-54 | -8.615850e-47 |
| Msa1100560 | Msa1275840 | 0.850202 | 1.977209e-60 | -8.615850e-47 |
| Msa1100560 | Msa1300610 | 0.800936 | 1.140627e-48 | -8.615850e-47 |
| Msa1100560 | Msa1314020 | 0.843137 | 1.685608e-58 | -8.615850e-47 |
| Msa1100560 | Msa1314050 | 0.814091 | 1.838463e-51 | -8.615850e-47 |
| Msa1100560 | Msa1314710 | 0.819463 | 1.146439e-52 | -8.615850e-47 |
| Msa1100560 | Msa1323030 | 0.815167 | 1.062118e-51 | -8.615850e-47 |
| Msa1100560 | Msa1323160 | 0.816563 | 5.184061e-52 | -8.615850e-47 |
| Msa1100560 | Msa1334670 | 0.811775 | 5.912789e-51 | -8.615850e-47 |
| Msa1100560 | Msa1336100 | 0.802007 | 6.881132e-49 | -8.615850e-47 |
| Msa1100560 | Msa1339490 | 0.807271 | 5.484281e-50 | -8.615850e-47 |
| Msa1100560 | Msa1350490 | 0.978087 | 4.254227e-145 | -8.615850e-47 |
| Msa1100560 | Msa1357490 | 0.803624 | 3.189832e-49 | -8.615850e-47 |
| Msa1100560 | Msa1362590 | 0.803971 | 2.702224e-49 | -8.615850e-47 |
| Msa1100560 | Msa1363690 | 0.825415 | 4.745382e-54 | -8.615850e-47 |
| Msa1100560 | Msa1365230 | 0.815218 | 1.034871e-51 | -8.615850e-47 |
| Msa1100560 | Msa1370930 | 0.860845 | 1.555025e-63 | -8.615850e-47 |
| Msa1100560 | Msa1376070 | 0.814000 | 1.924528e-51 | -8.615850e-47 |
| Msa1100560 | Msa1378950 | 0.853024 | 3.141114e-61 | -8.615850e-47 |
| Msa1100560 | Msa1379250 | 0.801175 | 1.019386e-48 | -8.615850e-47 |
| Msa1100560 | Msa1380490 | 0.830340 | 3.102907e-55 | -8.615850e-47 |
| Msa1100560 | Msa1384980 | -0.814347 | 1.613341e-51 | -8.615850e-47 |
| Msa1100560 | Msa1386120 | 0.800148 | 1.650958e-48 | -8.615850e-47 |
| Msa1100560 | Msa1393440 | 0.833714 | 4.551329e-56 | -8.615850e-47 |
| Msa1100560 | Msa1395690 | 0.847256 | 1.297367e-59 | -8.615850e-47 |
| Msa1100560 | Msa1396550 | 0.840444 | 8.663586e-58 | -8.615850e-47 |
| Msa1100560 | Msa1407210 | 0.845303 | 4.416703e-59 | -8.615850e-47 |
| Msa1100560 | Msa1409600 | 0.821684 | 3.542780e-53 | -8.615850e-47 |
| Msa1100560 | Msa1421120 | 0.806221 | 9.141266e-50 | -8.615850e-47 |
| Msa1100560 | Msa1426420 | 0.809145 | 2.186172e-50 | -8.615850e-47 |
| Msa1100560 | Msa1434700 | 0.809638 | 1.714232e-50 | -8.615850e-47 |
| Msa1100560 | Msa1445780 | 0.811886 | 5.594636e-51 | -8.615850e-47 |
| Msa1100560 | Msa1445900 | 0.839706 | 1.349916e-57 | -8.615850e-47 |
| Msa1100560 | Msa1447790 | 0.818640 | 1.763729e-52 | -8.615850e-47 |
| Msa1100560 | Msa1447900 | 0.809207 | 2.120666e-50 | -8.615850e-47 |
| Msa1100560 | Msa1451660 | 0.805249 | 1.462251e-49 | -8.615850e-47 |
| Msa0247050 | Msa1100560 | 0.821354 | 4.222622e-53 | -8.615850e-47 |
| Msa0266640 | Msa1100560 | 0.842289 | 2.831922e-58 | -8.615850e-47 |
| Msa0266650 | Msa1100560 | 0.810796 | 9.644060e-51 | -8.615850e-47 |
| Msa0277280 | Msa1100560 | 0.823382 | 1.427641e-53 | -8.615850e-47 |
| Msa0298270 | Msa1100560 | 0.804791 | 1.822762e-49 | -8.615850e-47 |
| Msa0302220 | Msa1100560 | 0.811305 | 7.483268e-51 | -8.615850e-47 |
| Msa0318370 | Msa1100560 | 0.820143 | 8.014903e-53 | -8.615850e-47 |
| Msa0336630 | Msa1100560 | 0.800693 | 1.278426e-48 | -8.615850e-47 |
| Msa0356200 | Msa1100560 | 0.820106 | 8.174413e-53 | -8.615850e-47 |
| Msa0356250 | Msa1100560 | 0.829631 | 4.620197e-55 | -8.615850e-47 |
| Msa0356380 | Msa1100560 | 0.813534 | 2.438480e-51 | -8.615850e-47 |
| Msa0356410 | Msa1100560 | 0.819225 | 1.298518e-52 | -8.615850e-47 |
| Msa0487100 | Msa1100560 | 0.816260 | 6.061516e-52 | -8.615850e-47 |
| Msa0491760 | Msa1100560 | 0.806948 | 6.417669e-50 | -8.615850e-47 |
| Msa0515260 | Msa1100560 | 0.801357 | 9.356023e-49 | -8.615850e-47 |
| Msa0531030 | Msa1100560 | 0.822472 | 2.326528e-53 | -8.615850e-47 |
| Msa0531080 | Msa1100560 | 0.828058 | 1.110301e-54 | -8.615850e-47 |
| Msa0532680 | Msa1100560 | 0.802646 | 5.083790e-49 | -8.615850e-47 |
| Msa0533510 | Msa1100560 | 0.846089 | 2.704135e-59 | -8.615850e-47 |
| Msa0533520 | Msa1100560 | 0.815353 | 9.657467e-52 | -8.615850e-47 |
| Msa0543740 | Msa1100560 | 0.809265 | 2.060477e-50 | -8.615850e-47 |
| Msa0548760 | Msa1100560 | 0.834697 | 2.580464e-56 | -8.615850e-47 |
| Msa0548970 | Msa1100560 | 0.817505 | 3.184360e-52 | -8.615850e-47 |
| Msa0549970 | Msa1100560 | 0.807236 | 5.579680e-50 | -8.615850e-47 |
| Msa0556720 | Msa1100560 | 0.809510 | 1.826454e-50 | -8.615850e-47 |
| Msa0587920 | Msa1100560 | 0.809240 | 2.087007e-50 | -8.615850e-47 |
| Msa0589450 | Msa1100560 | 0.814252 | 1.693210e-51 | -8.615850e-47 |
| Msa0589460 | Msa1100560 | 0.834409 | 3.048292e-56 | -8.615850e-47 |
| Msa0589720 | Msa1100560 | 0.813577 | 2.385112e-51 | -8.615850e-47 |
| Msa0594330 | Msa1100560 | 0.800781 | 1.226968e-48 | -8.615850e-47 |
| Msa0599600 | Msa1100560 | 0.813523 | 2.451491e-51 | -8.615850e-47 |
| Msa0854380 | Msa1100560 | 0.808176 | 3.521896e-50 | -8.615850e-47 |
| Msa0883610 | Msa1100560 | 0.851390 | 9.158788e-61 | -8.615850e-47 |
| Msa0883640 | Msa1100560 | 0.810356 | 1.200325e-50 | -8.615850e-47 |
| Msa0896920 | Msa1100560 | 0.815280 | 1.002182e-51 | -8.615850e-47 |
| Msa0910570 | Msa1100560 | 0.835530 | 1.590143e-56 | -8.615850e-47 |
| Msa0910830 | Msa1100560 | 0.813688 | 2.255628e-51 | -8.615850e-47 |
| Msa0913550 | Msa1100560 | 0.826491 | 2.635504e-54 | -8.615850e-47 |
| Msa0948460 | Msa1100560 | 0.821327 | 4.283869e-53 | -8.615850e-47 |
| Msa0951060 | Msa1100560 | 0.811314 | 7.447629e-51 | -8.615850e-47 |
| Msa0951150 | Msa1100560 | 0.801845 | 7.428828e-49 | -8.615850e-47 |
| Msa0960090 | Msa1100560 | 0.812716 | 3.684974e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100560 | MtrunA17_Chr3g0145981 | 57.692 | 312 | 111 | 6 | 16 | 324 | 34 | 327 | 1.48e-120 | 350 |
| Msa1100560 | MtrunA17_Chr8g0370851 | 49.835 | 303 | 136 | 6 | 30 | 324 | 21 | 315 | 1.23e-98 | 294 |
| Msa1100560 | MtrunA17_Chr8g0370821 | 51.325 | 302 | 130 | 6 | 30 | 322 | 31 | 324 | 7.35e-97 | 290 |
| Msa1100560 | MtrunA17_Chr8g0370831 | 46.302 | 311 | 135 | 5 | 30 | 329 | 20 | 309 | 3.52e-87 | 264 |
| Msa1100560 | MtrunA17_Chr7g0270841 | 39.167 | 240 | 135 | 5 | 87 | 322 | 39 | 271 | 1.62e-58 | 189 |
| Msa1100560 | MtrunA17_Chr2g0329791 | 34.049 | 326 | 164 | 10 | 1 | 322 | 4 | 282 | 1.61e-51 | 172 |
| Msa1100560 | MtrunA17_Chr2g0329781 | 34.843 | 287 | 141 | 8 | 44 | 322 | 15 | 263 | 2.37e-49 | 166 |
| Msa1100560 | MtrunA17_Chr7g0221751 | 36.327 | 245 | 136 | 10 | 93 | 324 | 69 | 306 | 2.58e-39 | 141 |
| Msa1100560 | MtrunA17_Chr2g0294721 | 34.934 | 229 | 137 | 6 | 93 | 314 | 65 | 288 | 2.33e-38 | 138 |
| Msa1100560 | MtrunA17_Chr1g0206111 | 31.949 | 313 | 171 | 12 | 15 | 314 | 11 | 294 | 3.05e-38 | 138 |
| Msa1100560 | MtrunA17_Chr7g0274181 | 49.153 | 59 | 27 | 1 | 14 | 72 | 3 | 58 | 1.03e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1100560 | AT3G12500.1 | 54.333 | 300 | 126 | 5 | 33 | 328 | 34 | 326 | 3.06e-107 | 317 |
| Msa1100560 | AT4G01700.1 | 42.500 | 240 | 127 | 5 | 87 | 322 | 41 | 273 | 2.11e-63 | 202 |
| Msa1100560 | AT1G02360.1 | 40.496 | 242 | 133 | 5 | 85 | 322 | 31 | 265 | 8.29e-60 | 193 |
| Msa1100560 | AT1G02360.2 | 40.496 | 242 | 133 | 5 | 85 | 322 | 77 | 311 | 3.28e-59 | 193 |
| Msa1100560 | AT1G02360.3 | 40.496 | 242 | 133 | 5 | 85 | 322 | 83 | 317 | 4.79e-59 | 193 |
| Msa1100560 | AT3G54420.1 | 35.505 | 307 | 151 | 8 | 17 | 322 | 13 | 273 | 2.61e-54 | 179 |
| Msa1100560 | AT2G43590.1 | 34.164 | 281 | 138 | 9 | 44 | 322 | 29 | 264 | 9.77e-48 | 162 |
| Msa1100560 | AT2G43610.1 | 32.710 | 321 | 155 | 10 | 14 | 322 | 10 | 281 | 5.46e-47 | 160 |
| Msa1100560 | AT2G43620.1 | 34.000 | 300 | 139 | 11 | 37 | 322 | 29 | 283 | 1.67e-46 | 159 |
| Msa1100560 | AT2G43570.1 | 31.193 | 327 | 162 | 13 | 3 | 322 | 7 | 277 | 5.12e-44 | 152 |
| Msa1100560 | AT2G43580.1 | 31.071 | 280 | 149 | 5 | 44 | 322 | 29 | 265 | 1.19e-43 | 151 |
| Msa1100560 | AT3G16920.1 | 34.348 | 230 | 137 | 8 | 93 | 314 | 77 | 300 | 1.26e-37 | 137 |
| Msa1100560 | AT3G16920.2 | 34.348 | 230 | 137 | 8 | 93 | 314 | 101 | 324 | 1.87e-37 | 137 |
| Msa1100560 | AT1G05850.1 | 31.045 | 335 | 185 | 16 | 3 | 324 | 5 | 306 | 2.49e-37 | 136 |
| Msa1100560 | AT1G05850.2 | 31.045 | 335 | 185 | 16 | 3 | 324 | 5 | 306 | 2.49e-37 | 136 |
| Msa1100560 | AT2G43600.1 | 32.042 | 284 | 137 | 12 | 49 | 322 | 36 | 273 | 3.01e-35 | 129 |
| Msa1100560 | AT2G43600.2 | 32.042 | 284 | 137 | 12 | 49 | 322 | 57 | 294 | 5.84e-35 | 129 |
| Msa1100560 | AT1G56680.1 | 31.206 | 282 | 143 | 10 | 49 | 322 | 42 | 280 | 6.74e-33 | 123 |
| Msa1100560 | AT1G56680.2 | 31.206 | 282 | 143 | 10 | 49 | 322 | 65 | 303 | 1.20e-32 | 123 |
| Msa1100560 | AT3G47540.1 | 25.316 | 237 | 121 | 9 | 87 | 322 | 33 | 214 | 4.97e-16 | 76.3 |
| Msa1100560 | AT3G47540.2 | 24.576 | 236 | 122 | 9 | 87 | 321 | 33 | 213 | 2.86e-14 | 72.4 |
Find 115 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTCCTTCGTTGCCGAACC+TGG | 0.245191 | 7_3:-30578097 | None:intergenic |
| CAGAGGAGGTTTCCAGGATA+TGG | 0.257878 | 7_3:+30578534 | Msa1100560:CDS |
| TTGTCTGCCCAACACCTTCC+TGG | 0.285066 | 7_3:-30577799 | None:intergenic |
| ATCAAAGGCAATAAAATATA+TGG | 0.293433 | 7_3:+30578321 | Msa1100560:CDS |
| TCTAAATTTCCATGTGTTCC+TGG | 0.293914 | 7_3:+30578267 | Msa1100560:CDS |
| GGAGAATGTGGAAGTATAAT+AGG | 0.323922 | 7_3:+30578342 | Msa1100560:CDS |
| GCCGAACCTGGGGAATGTTT+TGG | 0.339992 | 7_3:-30578085 | None:intergenic |
| TTCACAAAGGATGGGGAGAT+TGG | 0.341429 | 7_3:+30577717 | None:intergenic |
| AAAGCAATATCCCCGGTCAT+AGG | 0.342897 | 7_3:-30578199 | None:intergenic |
| CATGGCAAGATGGCTTTACT+TGG | 0.351502 | 7_3:-30578467 | None:intergenic |
| GGGTCTGTGGCAATGAGATC+TGG | 0.352495 | 7_3:-30578384 | None:intergenic |
| GCACTCTTGAAGGATATAAC+AGG | 0.377927 | 7_3:-30578405 | None:intergenic |
| TCCTCTGGAGTTGGAGGAGG+AGG | 0.393578 | 7_3:-30577955 | None:intergenic |
| GTTAGTCAGAGGAGGTTTCC+AGG | 0.398397 | 7_3:+30578528 | Msa1100560:CDS |
| GGCTGGAAGGAATGCGCGAC+CGG | 0.412108 | 7_3:+30578579 | Msa1100560:CDS |
| GGAATGCGCGACCGGGTGGC+TGG | 0.413441 | 7_3:+30578587 | Msa1100560:CDS |
| TACTCCTCCTCTGGAGTTGG+AGG | 0.424138 | 7_3:-30577961 | None:intergenic |
| TCTGGAGTTGGAGGAGGAGG+AGG | 0.434178 | 7_3:-30577952 | None:intergenic |
| AAGCAATATCCCCGGTCATA+GGG | 0.440767 | 7_3:-30578198 | None:intergenic |
| TCTTGCCATGACGCTATAAC+CGG | 0.442410 | 7_3:+30578480 | Msa1100560:CDS |
| ATACCATATAGCACTCTTGA+AGG | 0.443225 | 7_3:-30578415 | None:intergenic |
| TCTCCTTCGTTGCCGAACCT+GGG | 0.454761 | 7_3:-30578096 | None:intergenic |
| GCCAAAACATTCCCCAGGTT+CGG | 0.455985 | 7_3:+30578084 | Msa1100560:CDS |
| ATGAGATATTGTGACATACT+TGG | 0.456754 | 7_3:+30578642 | Msa1100560:CDS |
| TCACAAAGGATGGGGAGATT+GGG | 0.457705 | 7_3:+30577718 | None:intergenic |
| CTAAATTTCCATGTGTTCCT+GGG | 0.462737 | 7_3:+30578268 | Msa1100560:CDS |
| ACACATGGAAATTTAGAGCT+TGG | 0.463623 | 7_3:-30578261 | None:intergenic |
| TCCTCCTCTGGAGTTGGAGG+AGG | 0.463847 | 7_3:-30577958 | None:intergenic |
| CACCTCTTAGCCCCTATGAC+CGG | 0.464103 | 7_3:+30578187 | Msa1100560:CDS |
| TCAAGAGTGCTATATGGTAT+TGG | 0.468474 | 7_3:+30578418 | Msa1100560:CDS |
| TTCGCAGTAGTCTTCTTCGA+TGG | 0.468797 | 7_3:-30578238 | None:intergenic |
| TATCCTTCAAGAGTGCTATA+TGG | 0.471202 | 7_3:+30578412 | Msa1100560:CDS |
| ACCTCTTAGCCCCTATGACC+GGG | 0.474353 | 7_3:+30578188 | Msa1100560:CDS |
| CAAGATGGCTTTACTTGGAA+AGG | 0.478902 | 7_3:-30578462 | None:intergenic |
| TTATTGCCTTTGATCTGAAA+CGG | 0.479679 | 7_3:-30578312 | None:intergenic |
| TGACTAACATCAAAATCAGT+AGG | 0.481832 | 7_3:-30578513 | None:intergenic |
| CTCCCGTAGTATTGCTTCCC+AGG | 0.483969 | 7_3:-30578285 | None:intergenic |
| ATGAATTATGCTGCAGTGCA+TGG | 0.488295 | 7_3:+30577863 | Msa1100560:CDS |
| AGCATCACCAGGAAGGTGTT+GGG | 0.489004 | 7_3:+30577792 | Msa1100560:CDS |
| AAGAAAATTCAAAACATTCA+AGG | 0.490253 | 7_3:-30578683 | None:intergenic |
| TCGCAGTAGTCTTCTTCGAT+GGG | 0.491948 | 7_3:-30578237 | None:intergenic |
| CCCCGGTCATAGGGGCTAAG+AGG | 0.498386 | 7_3:-30578189 | None:intergenic |
| AGAGGAGGTTTCCAGGATAT+GGG | 0.498919 | 7_3:+30578535 | Msa1100560:CDS |
| AAGATGGCTTTACTTGGAAA+GGG | 0.503243 | 7_3:-30578461 | None:intergenic |
| ATGACCACATACGTCATAGA+AGG | 0.503651 | 7_3:+30578558 | Msa1100560:CDS |
| GAGCAATGTGGAAAACAAGC+TGG | 0.504321 | 7_3:+30577823 | Msa1100560:CDS |
| AGGTACTCCTCCTCTGGAGT+TGG | 0.506666 | 7_3:-30577964 | None:intergenic |
| TAGCATCACCAGGAAGGTGT+TGG | 0.507093 | 7_3:+30577791 | Msa1100560:CDS |
| ATCAGTAGGGATCCATCGTC+CGG | 0.511652 | 7_3:-30578499 | None:intergenic |
| GAGATGAGGTACTCCTCCTC+TGG | 0.514140 | 7_3:-30577970 | None:intergenic |
| TATGTGGTCATCCCATATCC+TGG | 0.517764 | 7_3:-30578546 | None:intergenic |
| GGATGTAAACGAGATGGATC+GGG | 0.521846 | 7_3:+30578608 | Msa1100560:CDS |
| TGAATTATGCTGCAGTGCAT+GGG | 0.527534 | 7_3:+30577864 | Msa1100560:CDS |
| GGCAACCCTTGCCGCAGTAG+TGG | 0.533175 | 7_3:-30577906 | None:intergenic |
| GGAGTACCTCATCTCGAGAA+AGG | 0.538404 | 7_3:+30577978 | Msa1100560:CDS |
| GGCTTTACTTGGAAAGGGAA+AGG | 0.540330 | 7_3:-30578456 | None:intergenic |
| ACCGACCACTACTGCGGCAA+GGG | 0.546092 | 7_3:+30577901 | Msa1100560:CDS |
| GGTCTGTGGCAATGAGATCT+GGG | 0.547304 | 7_3:-30578383 | None:intergenic |
| TAGTTCCATTACATTGACTC+TGG | 0.548638 | 7_3:-30577927 | None:intergenic |
| TGGATGTAAACGAGATGGAT+CGG | 0.553901 | 7_3:+30578607 | Msa1100560:CDS |
| ACTTGGAAAGGGAAAGGTGG+AGG | 0.555116 | 7_3:-30578450 | None:intergenic |
| AGCAATGTGGAAAACAAGCT+GGG | 0.556737 | 7_3:+30577824 | Msa1100560:CDS |
| AATAAAATATATGGAGAATG+TGG | 0.556765 | 7_3:+30578330 | Msa1100560:CDS |
| GACATACTTGGAGTTCGATA+CGG | 0.558585 | 7_3:+30578654 | Msa1100560:CDS |
| AAGCTGCCAAAACATTCCCC+AGG | 0.566465 | 7_3:+30578079 | Msa1100560:CDS |
| ACCCTTGCCGCAGTAGTGGT+CGG | 0.568655 | 7_3:-30577902 | None:intergenic |
| TCCTCCTCCAACTCCAGAGG+AGG | 0.569915 | 7_3:+30577957 | Msa1100560:CDS |
| GAAACTGGAATATTACACTT+CGG | 0.571315 | 7_3:-30577741 | None:intergenic |
| CTCGTTTACATCCAGCCACC+CGG | 0.571779 | 7_3:-30578598 | None:intergenic |
| GATGATGAGTGTGAGGGGAA+AGG | 0.572756 | 7_3:+30578030 | Msa1100560:CDS |
| GCTGGAAGGAATGCGCGACC+GGG | 0.573064 | 7_3:+30578580 | Msa1100560:CDS |
| AGCTCTCACAAAACAAGAGG+TGG | 0.574719 | 7_3:+30578162 | Msa1100560:CDS |
| GGAAGGAATGCGCGACCGGG+TGG | 0.575460 | 7_3:+30578583 | Msa1100560:CDS |
| CTCCTTCGTTGCCGAACCTG+GGG | 0.576604 | 7_3:-30578095 | None:intergenic |
| GACTAACATCAAAATCAGTA+GGG | 0.576729 | 7_3:-30578512 | None:intergenic |
| AGGGGTCCGTTTCAGATCAA+AGG | 0.577126 | 7_3:+30578306 | Msa1100560:CDS |
| TCCTCCTCCTCCAACTCCAG+AGG | 0.577892 | 7_3:+30577954 | Msa1100560:CDS |
| GGTTGCCAGAGTCAATGTAA+TGG | 0.579858 | 7_3:+30577922 | Msa1100560:CDS |
| TATTGCTTCCCAGGAACACA+TGG | 0.580157 | 7_3:-30578276 | None:intergenic |
| GTTATAGCGTCATGGCAAGA+TGG | 0.581749 | 7_3:-30578477 | None:intergenic |
| CCACATACGTCATAGAAGGC+TGG | 0.581811 | 7_3:+30578562 | Msa1100560:CDS |
| TTCCTGGGAAGCAATACTAC+GGG | 0.585236 | 7_3:+30578283 | Msa1100560:CDS |
| TTCCCCAGGTTCGGCAACGA+AGG | 0.585501 | 7_3:+30578093 | Msa1100560:CDS |
| GTTCCTGGGAAGCAATACTA+CGG | 0.592317 | 7_3:+30578282 | Msa1100560:CDS |
| AACCGACCACTACTGCGGCA+AGG | 0.593325 | 7_3:+30577900 | Msa1100560:CDS |
| CCAGCCTTCTATGACGTATG+TGG | 0.595690 | 7_3:-30578562 | None:intergenic |
| GTGGCTGGATGTAAACGAGA+TGG | 0.595690 | 7_3:+30578602 | Msa1100560:CDS |
| TGAAATCCTTTCTCGAGATG+AGG | 0.601183 | 7_3:-30577984 | None:intergenic |
| CACTCTTGAAGGATATAACA+GGG | 0.603547 | 7_3:-30578404 | None:intergenic |
| CATTCATAAAGCAATATCCC+CGG | 0.604590 | 7_3:-30578206 | None:intergenic |
| AGGCAGACCGGATCAAGAGA+TGG | 0.605959 | 7_3:-30578712 | None:intergenic |
| CGCGACGATGATGAGTGTGA+GGG | 0.608511 | 7_3:+30578024 | Msa1100560:CDS |
| CTACTAATTATAGCATCACC+AGG | 0.609536 | 7_3:+30577781 | Msa1100560:CDS |
| CTGGGAAGCAATACTACGGG+AGG | 0.613705 | 7_3:+30578286 | Msa1100560:CDS |
| TCGCGACGATGATGAGTGTG+AGG | 0.615130 | 7_3:+30578023 | Msa1100560:CDS |
| AGCAATATCCCCGGTCATAG+GGG | 0.615444 | 7_3:-30578197 | None:intergenic |
| ATCGTCCGGTTATAGCGTCA+TGG | 0.618569 | 7_3:-30578485 | None:intergenic |
| GAAGGATATAACAGGGTCTG+TGG | 0.619235 | 7_3:-30578397 | None:intergenic |
| CCTCTTAGCCCCTATGACCG+GGG | 0.619811 | 7_3:+30578189 | Msa1100560:CDS |
| TGGGAAGCAATACTACGGGA+GGG | 0.621104 | 7_3:+30578287 | Msa1100560:CDS |
| GGGAAGCAATACTACGGGAG+GGG | 0.628496 | 7_3:+30578288 | Msa1100560:CDS |
| CAAAGCTCTCACAAAACAAG+AGG | 0.630156 | 7_3:+30578159 | Msa1100560:CDS |
| TAATTATAGCATCACCAGGA+AGG | 0.639520 | 7_3:+30577785 | Msa1100560:CDS |
| GTAAACGAGATGGATCGGGT+TGG | 0.643330 | 7_3:+30578612 | Msa1100560:CDS |
| TTTACTTGGAAAGGGAAAGG+TGG | 0.645661 | 7_3:-30578453 | None:intergenic |
| GCAATGTGGAAAACAAGCTG+GGG | 0.650439 | 7_3:+30577825 | Msa1100560:CDS |
| ATACGTCATAGAAGGCTGGA+AGG | 0.655440 | 7_3:+30578566 | Msa1100560:CDS |
| ATGACGCTATAACCGGACGA+TGG | 0.658263 | 7_3:+30578487 | Msa1100560:CDS |
| AGCTTCAACAAATCCTTCGT+AGG | 0.660013 | 7_3:-30578061 | None:intergenic |
| GAATTATGCTGCAGTGCATG+GGG | 0.669091 | 7_3:+30577865 | Msa1100560:CDS |
| GCGACGATGATGAGTGTGAG+GGG | 0.672599 | 7_3:+30578025 | Msa1100560:CDS |
| GGATCAACCGACCACTACTG+CGG | 0.690258 | 7_3:+30577895 | Msa1100560:CDS |
| AAAATTCAAAACATTCAAGG+TGG | 0.701312 | 7_3:-30578680 | None:intergenic |
| CAATGTGGAAAACAAGCTGG+GGG | 0.710643 | 7_3:+30577826 | Msa1100560:CDS |
| TGGGCAGACAAAGAGCAATG+TGG | 0.733933 | 7_3:+30577811 | Msa1100560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAAGGCAATAAAATATA+TGG | + | chr7_3:30578321-30578340 | Msa1100560:CDS | 20.0% |
| !! | AATAAAATATATGGAGAATG+TGG | + | chr7_3:30578330-30578349 | Msa1100560:CDS | 20.0% |
| !! | AAGAAAATTCAAAACATTCA+AGG | - | chr7_3:30578686-30578705 | None:intergenic | 20.0% |
| !! | ATCAAAGGCAATAAAATATA+TGG | + | chr7_3:30578321-30578340 | Msa1100560:CDS | 20.0% |
| !! | AATAAAATATATGGAGAATG+TGG | + | chr7_3:30578330-30578349 | Msa1100560:CDS | 20.0% |
| !! | AAGAAAATTCAAAACATTCA+AGG | - | chr7_3:30578686-30578705 | None:intergenic | 20.0% |
| !!! | AGTAGTACTATTGCTATTTT+TGG | - | chr7_3:30577766-30577785 | None:intergenic | 25.0% |
| ! | AAAATTCAAAACATTCAAGG+TGG | - | chr7_3:30578683-30578702 | None:intergenic | 25.0% |
| !!! | AGTAGTACTATTGCTATTTT+TGG | - | chr7_3:30577766-30577785 | None:intergenic | 25.0% |
| ! | AAAATTCAAAACATTCAAGG+TGG | - | chr7_3:30578683-30578702 | None:intergenic | 25.0% |
| GAAACTGGAATATTACACTT+CGG | - | chr7_3:30577744-30577763 | None:intergenic | 30.0% | |
| !!! | CTATTGCTATTTTTGGAAAC+TGG | - | chr7_3:30577759-30577778 | None:intergenic | 30.0% |
| TTATTGCCTTTGATCTGAAA+CGG | - | chr7_3:30578315-30578334 | None:intergenic | 30.0% | |
| GACTAACATCAAAATCAGTA+GGG | - | chr7_3:30578515-30578534 | None:intergenic | 30.0% | |
| TGACTAACATCAAAATCAGT+AGG | - | chr7_3:30578516-30578535 | None:intergenic | 30.0% | |
| ATGAGATATTGTGACATACT+TGG | + | chr7_3:30578642-30578661 | Msa1100560:CDS | 30.0% | |
| GAAACTGGAATATTACACTT+CGG | - | chr7_3:30577744-30577763 | None:intergenic | 30.0% | |
| !!! | CTATTGCTATTTTTGGAAAC+TGG | - | chr7_3:30577759-30577778 | None:intergenic | 30.0% |
| TTATTGCCTTTGATCTGAAA+CGG | - | chr7_3:30578315-30578334 | None:intergenic | 30.0% | |
| GACTAACATCAAAATCAGTA+GGG | - | chr7_3:30578515-30578534 | None:intergenic | 30.0% | |
| TGACTAACATCAAAATCAGT+AGG | - | chr7_3:30578516-30578535 | None:intergenic | 30.0% | |
| ATGAGATATTGTGACATACT+TGG | + | chr7_3:30578642-30578661 | Msa1100560:CDS | 30.0% | |
| CTACTAATTATAGCATCACC+AGG | + | chr7_3:30577781-30577800 | Msa1100560:CDS | 35.0% | |
| TAATTATAGCATCACCAGGA+AGG | + | chr7_3:30577785-30577804 | Msa1100560:CDS | 35.0% | |
| !! | TAGTTCCATTACATTGACTC+TGG | - | chr7_3:30577930-30577949 | None:intergenic | 35.0% |
| ! | AAAGGATTTTACACCTACGA+AGG | + | chr7_3:30578048-30578067 | Msa1100560:CDS | 35.0% |
| !!! | AGAGACATTGCTGCTTTTTT+TGG | + | chr7_3:30578135-30578154 | Msa1100560:CDS | 35.0% |
| CATTCATAAAGCAATATCCC+CGG | - | chr7_3:30578209-30578228 | None:intergenic | 35.0% | |
| ! | ACACATGGAAATTTAGAGCT+TGG | - | chr7_3:30578264-30578283 | None:intergenic | 35.0% |
| TCTAAATTTCCATGTGTTCC+TGG | + | chr7_3:30578267-30578286 | Msa1100560:CDS | 35.0% | |
| CTAAATTTCCATGTGTTCCT+GGG | + | chr7_3:30578268-30578287 | Msa1100560:CDS | 35.0% | |
| ! | GGAGAATGTGGAAGTATAAT+AGG | + | chr7_3:30578342-30578361 | Msa1100560:CDS | 35.0% |
| CACTCTTGAAGGATATAACA+GGG | - | chr7_3:30578407-30578426 | None:intergenic | 35.0% | |
| !! | TATCCTTCAAGAGTGCTATA+TGG | + | chr7_3:30578412-30578431 | Msa1100560:CDS | 35.0% |
| ATACCATATAGCACTCTTGA+AGG | - | chr7_3:30578418-30578437 | None:intergenic | 35.0% | |
| !! | TCAAGAGTGCTATATGGTAT+TGG | + | chr7_3:30578418-30578437 | Msa1100560:CDS | 35.0% |
| ! | AAGATGGCTTTACTTGGAAA+GGG | - | chr7_3:30578464-30578483 | None:intergenic | 35.0% |
| !! | CTGATTTTGATGTTAGTCAG+AGG | + | chr7_3:30578517-30578536 | Msa1100560:CDS | 35.0% |
| !! | ATTTTGATGTTAGTCAGAGG+AGG | + | chr7_3:30578520-30578539 | Msa1100560:CDS | 35.0% |
| CTACTAATTATAGCATCACC+AGG | + | chr7_3:30577781-30577800 | Msa1100560:CDS | 35.0% | |
| TAATTATAGCATCACCAGGA+AGG | + | chr7_3:30577785-30577804 | Msa1100560:CDS | 35.0% | |
| !! | TAGTTCCATTACATTGACTC+TGG | - | chr7_3:30577930-30577949 | None:intergenic | 35.0% |
| ! | AAAGGATTTTACACCTACGA+AGG | + | chr7_3:30578048-30578067 | Msa1100560:CDS | 35.0% |
| !!! | AGAGACATTGCTGCTTTTTT+TGG | + | chr7_3:30578135-30578154 | Msa1100560:CDS | 35.0% |
| CATTCATAAAGCAATATCCC+CGG | - | chr7_3:30578209-30578228 | None:intergenic | 35.0% | |
| ! | ACACATGGAAATTTAGAGCT+TGG | - | chr7_3:30578264-30578283 | None:intergenic | 35.0% |
| TCTAAATTTCCATGTGTTCC+TGG | + | chr7_3:30578267-30578286 | Msa1100560:CDS | 35.0% | |
| CTAAATTTCCATGTGTTCCT+GGG | + | chr7_3:30578268-30578287 | Msa1100560:CDS | 35.0% | |
| ! | GGAGAATGTGGAAGTATAAT+AGG | + | chr7_3:30578342-30578361 | Msa1100560:CDS | 35.0% |
| CACTCTTGAAGGATATAACA+GGG | - | chr7_3:30578407-30578426 | None:intergenic | 35.0% | |
| !! | TATCCTTCAAGAGTGCTATA+TGG | + | chr7_3:30578412-30578431 | Msa1100560:CDS | 35.0% |
| ATACCATATAGCACTCTTGA+AGG | - | chr7_3:30578418-30578437 | None:intergenic | 35.0% | |
| !! | TCAAGAGTGCTATATGGTAT+TGG | + | chr7_3:30578418-30578437 | Msa1100560:CDS | 35.0% |
| ! | AAGATGGCTTTACTTGGAAA+GGG | - | chr7_3:30578464-30578483 | None:intergenic | 35.0% |
| !! | CTGATTTTGATGTTAGTCAG+AGG | + | chr7_3:30578517-30578536 | Msa1100560:CDS | 35.0% |
| !! | ATTTTGATGTTAGTCAGAGG+AGG | + | chr7_3:30578520-30578539 | Msa1100560:CDS | 35.0% |
| AGCAATGTGGAAAACAAGCT+GGG | + | chr7_3:30577824-30577843 | Msa1100560:CDS | 40.0% | |
| ATGAATTATGCTGCAGTGCA+TGG | + | chr7_3:30577863-30577882 | Msa1100560:CDS | 40.0% | |
| TGAATTATGCTGCAGTGCAT+GGG | + | chr7_3:30577864-30577883 | Msa1100560:CDS | 40.0% | |
| TGAAATCCTTTCTCGAGATG+AGG | - | chr7_3:30577987-30578006 | None:intergenic | 40.0% | |
| AGCTTCAACAAATCCTTCGT+AGG | - | chr7_3:30578064-30578083 | None:intergenic | 40.0% | |
| CAAAGCTCTCACAAAACAAG+AGG | + | chr7_3:30578159-30578178 | Msa1100560:CDS | 40.0% | |
| GCACTCTTGAAGGATATAAC+AGG | - | chr7_3:30578408-30578427 | None:intergenic | 40.0% | |
| TTTACTTGGAAAGGGAAAGG+TGG | - | chr7_3:30578456-30578475 | None:intergenic | 40.0% | |
| ! | CAAGATGGCTTTACTTGGAA+AGG | - | chr7_3:30578465-30578484 | None:intergenic | 40.0% |
| ATGACCACATACGTCATAGA+AGG | + | chr7_3:30578558-30578577 | Msa1100560:CDS | 40.0% | |
| TGGATGTAAACGAGATGGAT+CGG | + | chr7_3:30578607-30578626 | Msa1100560:CDS | 40.0% | |
| GACATACTTGGAGTTCGATA+CGG | + | chr7_3:30578654-30578673 | Msa1100560:CDS | 40.0% | |
| AGCAATGTGGAAAACAAGCT+GGG | + | chr7_3:30577824-30577843 | Msa1100560:CDS | 40.0% | |
| ATGAATTATGCTGCAGTGCA+TGG | + | chr7_3:30577863-30577882 | Msa1100560:CDS | 40.0% | |
| TGAATTATGCTGCAGTGCAT+GGG | + | chr7_3:30577864-30577883 | Msa1100560:CDS | 40.0% | |
| TGAAATCCTTTCTCGAGATG+AGG | - | chr7_3:30577987-30578006 | None:intergenic | 40.0% | |
| AGCTTCAACAAATCCTTCGT+AGG | - | chr7_3:30578064-30578083 | None:intergenic | 40.0% | |
| CAAAGCTCTCACAAAACAAG+AGG | + | chr7_3:30578159-30578178 | Msa1100560:CDS | 40.0% | |
| GCACTCTTGAAGGATATAAC+AGG | - | chr7_3:30578408-30578427 | None:intergenic | 40.0% | |
| TTTACTTGGAAAGGGAAAGG+TGG | - | chr7_3:30578456-30578475 | None:intergenic | 40.0% | |
| ! | CAAGATGGCTTTACTTGGAA+AGG | - | chr7_3:30578465-30578484 | None:intergenic | 40.0% |
| ATGACCACATACGTCATAGA+AGG | + | chr7_3:30578558-30578577 | Msa1100560:CDS | 40.0% | |
| TGGATGTAAACGAGATGGAT+CGG | + | chr7_3:30578607-30578626 | Msa1100560:CDS | 40.0% | |
| GACATACTTGGAGTTCGATA+CGG | + | chr7_3:30578654-30578673 | Msa1100560:CDS | 40.0% | |
| GAGCAATGTGGAAAACAAGC+TGG | + | chr7_3:30577823-30577842 | Msa1100560:CDS | 45.0% | |
| GCAATGTGGAAAACAAGCTG+GGG | + | chr7_3:30577825-30577844 | Msa1100560:CDS | 45.0% | |
| CAATGTGGAAAACAAGCTGG+GGG | + | chr7_3:30577826-30577845 | Msa1100560:CDS | 45.0% | |
| GAATTATGCTGCAGTGCATG+GGG | + | chr7_3:30577865-30577884 | Msa1100560:CDS | 45.0% | |
| GGTTGCCAGAGTCAATGTAA+TGG | + | chr7_3:30577922-30577941 | Msa1100560:CDS | 45.0% | |
| AGCTCTCACAAAACAAGAGG+TGG | + | chr7_3:30578162-30578181 | Msa1100560:CDS | 45.0% | |
| AAGCAATATCCCCGGTCATA+GGG | - | chr7_3:30578201-30578220 | None:intergenic | 45.0% | |
| AAAGCAATATCCCCGGTCAT+AGG | - | chr7_3:30578202-30578221 | None:intergenic | 45.0% | |
| TCGCAGTAGTCTTCTTCGAT+GGG | - | chr7_3:30578240-30578259 | None:intergenic | 45.0% | |
| TTCGCAGTAGTCTTCTTCGA+TGG | - | chr7_3:30578241-30578260 | None:intergenic | 45.0% | |
| TATTGCTTCCCAGGAACACA+TGG | - | chr7_3:30578279-30578298 | None:intergenic | 45.0% | |
| GTTCCTGGGAAGCAATACTA+CGG | + | chr7_3:30578282-30578301 | Msa1100560:CDS | 45.0% | |
| TTCCTGGGAAGCAATACTAC+GGG | + | chr7_3:30578283-30578302 | Msa1100560:CDS | 45.0% | |
| GAAGGATATAACAGGGTCTG+TGG | - | chr7_3:30578400-30578419 | None:intergenic | 45.0% | |
| GGCTTTACTTGGAAAGGGAA+AGG | - | chr7_3:30578459-30578478 | None:intergenic | 45.0% | |
| ! | CATGGCAAGATGGCTTTACT+TGG | - | chr7_3:30578470-30578489 | None:intergenic | 45.0% |
| GTTATAGCGTCATGGCAAGA+TGG | - | chr7_3:30578480-30578499 | None:intergenic | 45.0% | |
| TCTTGCCATGACGCTATAAC+CGG | + | chr7_3:30578480-30578499 | Msa1100560:CDS | 45.0% | |
| AGAGGAGGTTTCCAGGATAT+GGG | + | chr7_3:30578535-30578554 | Msa1100560:CDS | 45.0% | |
| TATGTGGTCATCCCATATCC+TGG | - | chr7_3:30578549-30578568 | None:intergenic | 45.0% | |
| ATACGTCATAGAAGGCTGGA+AGG | + | chr7_3:30578566-30578585 | Msa1100560:CDS | 45.0% | |
| GGATGTAAACGAGATGGATC+GGG | + | chr7_3:30578608-30578627 | Msa1100560:CDS | 45.0% | |
| GAGCAATGTGGAAAACAAGC+TGG | + | chr7_3:30577823-30577842 | Msa1100560:CDS | 45.0% | |
| GCAATGTGGAAAACAAGCTG+GGG | + | chr7_3:30577825-30577844 | Msa1100560:CDS | 45.0% | |
| CAATGTGGAAAACAAGCTGG+GGG | + | chr7_3:30577826-30577845 | Msa1100560:CDS | 45.0% | |
| GAATTATGCTGCAGTGCATG+GGG | + | chr7_3:30577865-30577884 | Msa1100560:CDS | 45.0% | |
| GGTTGCCAGAGTCAATGTAA+TGG | + | chr7_3:30577922-30577941 | Msa1100560:CDS | 45.0% | |
| AGCTCTCACAAAACAAGAGG+TGG | + | chr7_3:30578162-30578181 | Msa1100560:CDS | 45.0% | |
| AAGCAATATCCCCGGTCATA+GGG | - | chr7_3:30578201-30578220 | None:intergenic | 45.0% | |
| AAAGCAATATCCCCGGTCAT+AGG | - | chr7_3:30578202-30578221 | None:intergenic | 45.0% | |
| TCGCAGTAGTCTTCTTCGAT+GGG | - | chr7_3:30578240-30578259 | None:intergenic | 45.0% | |
| TTCGCAGTAGTCTTCTTCGA+TGG | - | chr7_3:30578241-30578260 | None:intergenic | 45.0% | |
| TATTGCTTCCCAGGAACACA+TGG | - | chr7_3:30578279-30578298 | None:intergenic | 45.0% | |
| GTTCCTGGGAAGCAATACTA+CGG | + | chr7_3:30578282-30578301 | Msa1100560:CDS | 45.0% | |
| TTCCTGGGAAGCAATACTAC+GGG | + | chr7_3:30578283-30578302 | Msa1100560:CDS | 45.0% | |
| GAAGGATATAACAGGGTCTG+TGG | - | chr7_3:30578400-30578419 | None:intergenic | 45.0% | |
| GGCTTTACTTGGAAAGGGAA+AGG | - | chr7_3:30578459-30578478 | None:intergenic | 45.0% | |
| ! | CATGGCAAGATGGCTTTACT+TGG | - | chr7_3:30578470-30578489 | None:intergenic | 45.0% |
| GTTATAGCGTCATGGCAAGA+TGG | - | chr7_3:30578480-30578499 | None:intergenic | 45.0% | |
| TCTTGCCATGACGCTATAAC+CGG | + | chr7_3:30578480-30578499 | Msa1100560:CDS | 45.0% | |
| AGAGGAGGTTTCCAGGATAT+GGG | + | chr7_3:30578535-30578554 | Msa1100560:CDS | 45.0% | |
| TATGTGGTCATCCCATATCC+TGG | - | chr7_3:30578549-30578568 | None:intergenic | 45.0% | |
| ATACGTCATAGAAGGCTGGA+AGG | + | chr7_3:30578566-30578585 | Msa1100560:CDS | 45.0% | |
| GGATGTAAACGAGATGGATC+GGG | + | chr7_3:30578608-30578627 | Msa1100560:CDS | 45.0% | |
| ! | TAGCATCACCAGGAAGGTGT+TGG | + | chr7_3:30577791-30577810 | Msa1100560:CDS | 50.0% |
| !! | AGCATCACCAGGAAGGTGTT+GGG | + | chr7_3:30577792-30577811 | Msa1100560:CDS | 50.0% |
| TGGGCAGACAAAGAGCAATG+TGG | + | chr7_3:30577811-30577830 | Msa1100560:CDS | 50.0% | |
| ! | GGAGTACCTCATCTCGAGAA+AGG | + | chr7_3:30577978-30577997 | Msa1100560:CDS | 50.0% |
| GATGATGAGTGTGAGGGGAA+AGG | + | chr7_3:30578030-30578049 | Msa1100560:CDS | 50.0% | |
| AAGCTGCCAAAACATTCCCC+AGG | + | chr7_3:30578079-30578098 | Msa1100560:CDS | 50.0% | |
| GCCAAAACATTCCCCAGGTT+CGG | + | chr7_3:30578084-30578103 | Msa1100560:CDS | 50.0% | |
| AGCAATATCCCCGGTCATAG+GGG | - | chr7_3:30578200-30578219 | None:intergenic | 50.0% | |
| TGGGAAGCAATACTACGGGA+GGG | + | chr7_3:30578287-30578306 | Msa1100560:CDS | 50.0% | |
| AGGGGTCCGTTTCAGATCAA+AGG | + | chr7_3:30578306-30578325 | Msa1100560:CDS | 50.0% | |
| GGTCTGTGGCAATGAGATCT+GGG | - | chr7_3:30578386-30578405 | None:intergenic | 50.0% | |
| ACTTGGAAAGGGAAAGGTGG+AGG | - | chr7_3:30578453-30578472 | None:intergenic | 50.0% | |
| ATCGTCCGGTTATAGCGTCA+TGG | - | chr7_3:30578488-30578507 | None:intergenic | 50.0% | |
| ATGACGCTATAACCGGACGA+TGG | + | chr7_3:30578487-30578506 | Msa1100560:CDS | 50.0% | |
| ATCAGTAGGGATCCATCGTC+CGG | - | chr7_3:30578502-30578521 | None:intergenic | 50.0% | |
| GTTAGTCAGAGGAGGTTTCC+AGG | + | chr7_3:30578528-30578547 | Msa1100560:CDS | 50.0% | |
| CAGAGGAGGTTTCCAGGATA+TGG | + | chr7_3:30578534-30578553 | Msa1100560:CDS | 50.0% | |
| CCAGCCTTCTATGACGTATG+TGG | - | chr7_3:30578565-30578584 | None:intergenic | 50.0% | |
| CCACATACGTCATAGAAGGC+TGG | + | chr7_3:30578562-30578581 | Msa1100560:CDS | 50.0% | |
| GTGGCTGGATGTAAACGAGA+TGG | + | chr7_3:30578602-30578621 | Msa1100560:CDS | 50.0% | |
| GTAAACGAGATGGATCGGGT+TGG | + | chr7_3:30578612-30578631 | Msa1100560:CDS | 50.0% | |
| ! | TAGCATCACCAGGAAGGTGT+TGG | + | chr7_3:30577791-30577810 | Msa1100560:CDS | 50.0% |
| !! | AGCATCACCAGGAAGGTGTT+GGG | + | chr7_3:30577792-30577811 | Msa1100560:CDS | 50.0% |
| TGGGCAGACAAAGAGCAATG+TGG | + | chr7_3:30577811-30577830 | Msa1100560:CDS | 50.0% | |
| ! | GGAGTACCTCATCTCGAGAA+AGG | + | chr7_3:30577978-30577997 | Msa1100560:CDS | 50.0% |
| GATGATGAGTGTGAGGGGAA+AGG | + | chr7_3:30578030-30578049 | Msa1100560:CDS | 50.0% | |
| AAGCTGCCAAAACATTCCCC+AGG | + | chr7_3:30578079-30578098 | Msa1100560:CDS | 50.0% | |
| GCCAAAACATTCCCCAGGTT+CGG | + | chr7_3:30578084-30578103 | Msa1100560:CDS | 50.0% | |
| AGCAATATCCCCGGTCATAG+GGG | - | chr7_3:30578200-30578219 | None:intergenic | 50.0% | |
| TGGGAAGCAATACTACGGGA+GGG | + | chr7_3:30578287-30578306 | Msa1100560:CDS | 50.0% | |
| AGGGGTCCGTTTCAGATCAA+AGG | + | chr7_3:30578306-30578325 | Msa1100560:CDS | 50.0% | |
| GGTCTGTGGCAATGAGATCT+GGG | - | chr7_3:30578386-30578405 | None:intergenic | 50.0% | |
| ACTTGGAAAGGGAAAGGTGG+AGG | - | chr7_3:30578453-30578472 | None:intergenic | 50.0% | |
| ATCGTCCGGTTATAGCGTCA+TGG | - | chr7_3:30578488-30578507 | None:intergenic | 50.0% | |
| ATGACGCTATAACCGGACGA+TGG | + | chr7_3:30578487-30578506 | Msa1100560:CDS | 50.0% | |
| ATCAGTAGGGATCCATCGTC+CGG | - | chr7_3:30578502-30578521 | None:intergenic | 50.0% | |
| GTTAGTCAGAGGAGGTTTCC+AGG | + | chr7_3:30578528-30578547 | Msa1100560:CDS | 50.0% | |
| CAGAGGAGGTTTCCAGGATA+TGG | + | chr7_3:30578534-30578553 | Msa1100560:CDS | 50.0% | |
| CCAGCCTTCTATGACGTATG+TGG | - | chr7_3:30578565-30578584 | None:intergenic | 50.0% | |
| CCACATACGTCATAGAAGGC+TGG | + | chr7_3:30578562-30578581 | Msa1100560:CDS | 50.0% | |
| GTGGCTGGATGTAAACGAGA+TGG | + | chr7_3:30578602-30578621 | Msa1100560:CDS | 50.0% | |
| GTAAACGAGATGGATCGGGT+TGG | + | chr7_3:30578612-30578631 | Msa1100560:CDS | 50.0% | |
| TTGTCTGCCCAACACCTTCC+TGG | - | chr7_3:30577802-30577821 | None:intergenic | 55.0% | |
| ! | TGCAGTGCATGGGGCTTTTG+TGG | + | chr7_3:30577874-30577893 | Msa1100560:CDS | 55.0% |
| GGATCAACCGACCACTACTG+CGG | + | chr7_3:30577895-30577914 | Msa1100560:CDS | 55.0% | |
| !! | TACTCCTCCTCTGGAGTTGG+AGG | - | chr7_3:30577964-30577983 | None:intergenic | 55.0% |
| !! | AGGTACTCCTCCTCTGGAGT+TGG | - | chr7_3:30577967-30577986 | None:intergenic | 55.0% |
| ! | GAGATGAGGTACTCCTCCTC+TGG | - | chr7_3:30577973-30577992 | None:intergenic | 55.0% |
| TCGCGACGATGATGAGTGTG+AGG | + | chr7_3:30578023-30578042 | Msa1100560:CDS | 55.0% | |
| CGCGACGATGATGAGTGTGA+GGG | + | chr7_3:30578024-30578043 | Msa1100560:CDS | 55.0% | |
| GCGACGATGATGAGTGTGAG+GGG | + | chr7_3:30578025-30578044 | Msa1100560:CDS | 55.0% | |
| ! | GCCGAACCTGGGGAATGTTT+TGG | - | chr7_3:30578088-30578107 | None:intergenic | 55.0% |
| TCTCCTTCGTTGCCGAACCT+GGG | - | chr7_3:30578099-30578118 | None:intergenic | 55.0% | |
| CACCTCTTAGCCCCTATGAC+CGG | + | chr7_3:30578187-30578206 | Msa1100560:CDS | 55.0% | |
| ACCTCTTAGCCCCTATGACC+GGG | + | chr7_3:30578188-30578207 | Msa1100560:CDS | 55.0% | |
| CTCCCGTAGTATTGCTTCCC+AGG | - | chr7_3:30578288-30578307 | None:intergenic | 55.0% | |
| CTGGGAAGCAATACTACGGG+AGG | + | chr7_3:30578286-30578305 | Msa1100560:CDS | 55.0% | |
| GGGAAGCAATACTACGGGAG+GGG | + | chr7_3:30578288-30578307 | Msa1100560:CDS | 55.0% | |
| GGGTCTGTGGCAATGAGATC+TGG | - | chr7_3:30578387-30578406 | None:intergenic | 55.0% | |
| CTCGTTTACATCCAGCCACC+CGG | - | chr7_3:30578601-30578620 | None:intergenic | 55.0% | |
| TTGTCTGCCCAACACCTTCC+TGG | - | chr7_3:30577802-30577821 | None:intergenic | 55.0% | |
| ! | TGCAGTGCATGGGGCTTTTG+TGG | + | chr7_3:30577874-30577893 | Msa1100560:CDS | 55.0% |
| GGATCAACCGACCACTACTG+CGG | + | chr7_3:30577895-30577914 | Msa1100560:CDS | 55.0% | |
| !! | TACTCCTCCTCTGGAGTTGG+AGG | - | chr7_3:30577964-30577983 | None:intergenic | 55.0% |
| !! | AGGTACTCCTCCTCTGGAGT+TGG | - | chr7_3:30577967-30577986 | None:intergenic | 55.0% |
| ! | GAGATGAGGTACTCCTCCTC+TGG | - | chr7_3:30577973-30577992 | None:intergenic | 55.0% |
| TCGCGACGATGATGAGTGTG+AGG | + | chr7_3:30578023-30578042 | Msa1100560:CDS | 55.0% | |
| CGCGACGATGATGAGTGTGA+GGG | + | chr7_3:30578024-30578043 | Msa1100560:CDS | 55.0% | |
| GCGACGATGATGAGTGTGAG+GGG | + | chr7_3:30578025-30578044 | Msa1100560:CDS | 55.0% | |
| ! | GCCGAACCTGGGGAATGTTT+TGG | - | chr7_3:30578088-30578107 | None:intergenic | 55.0% |
| TCTCCTTCGTTGCCGAACCT+GGG | - | chr7_3:30578099-30578118 | None:intergenic | 55.0% | |
| CACCTCTTAGCCCCTATGAC+CGG | + | chr7_3:30578187-30578206 | Msa1100560:CDS | 55.0% | |
| ACCTCTTAGCCCCTATGACC+GGG | + | chr7_3:30578188-30578207 | Msa1100560:CDS | 55.0% | |
| CTCCCGTAGTATTGCTTCCC+AGG | - | chr7_3:30578288-30578307 | None:intergenic | 55.0% | |
| CTGGGAAGCAATACTACGGG+AGG | + | chr7_3:30578286-30578305 | Msa1100560:CDS | 55.0% | |
| GGGAAGCAATACTACGGGAG+GGG | + | chr7_3:30578288-30578307 | Msa1100560:CDS | 55.0% | |
| GGGTCTGTGGCAATGAGATC+TGG | - | chr7_3:30578387-30578406 | None:intergenic | 55.0% | |
| CTCGTTTACATCCAGCCACC+CGG | - | chr7_3:30578601-30578620 | None:intergenic | 55.0% | |
| AACCGACCACTACTGCGGCA+AGG | + | chr7_3:30577900-30577919 | Msa1100560:CDS | 60.0% | |
| ACCGACCACTACTGCGGCAA+GGG | + | chr7_3:30577901-30577920 | Msa1100560:CDS | 60.0% | |
| ACCCTTGCCGCAGTAGTGGT+CGG | - | chr7_3:30577905-30577924 | None:intergenic | 60.0% | |
| ! | TCTGGAGTTGGAGGAGGAGG+AGG | - | chr7_3:30577955-30577974 | None:intergenic | 60.0% |
| TCCTCCTCCTCCAACTCCAG+AGG | + | chr7_3:30577954-30577973 | Msa1100560:CDS | 60.0% | |
| !! | TCCTCTGGAGTTGGAGGAGG+AGG | - | chr7_3:30577958-30577977 | None:intergenic | 60.0% |
| TCCTCCTCCAACTCCAGAGG+AGG | + | chr7_3:30577957-30577976 | Msa1100560:CDS | 60.0% | |
| !! | TCCTCCTCTGGAGTTGGAGG+AGG | - | chr7_3:30577961-30577980 | None:intergenic | 60.0% |
| TTCCCCAGGTTCGGCAACGA+AGG | + | chr7_3:30578093-30578112 | Msa1100560:CDS | 60.0% | |
| CTCCTTCGTTGCCGAACCTG+GGG | - | chr7_3:30578098-30578117 | None:intergenic | 60.0% | |
| GTCTCCTTCGTTGCCGAACC+TGG | - | chr7_3:30578100-30578119 | None:intergenic | 60.0% | |
| CCTCTTAGCCCCTATGACCG+GGG | + | chr7_3:30578189-30578208 | Msa1100560:CDS | 60.0% | |
| AACCGACCACTACTGCGGCA+AGG | + | chr7_3:30577900-30577919 | Msa1100560:CDS | 60.0% | |
| ACCGACCACTACTGCGGCAA+GGG | + | chr7_3:30577901-30577920 | Msa1100560:CDS | 60.0% | |
| ACCCTTGCCGCAGTAGTGGT+CGG | - | chr7_3:30577905-30577924 | None:intergenic | 60.0% | |
| ! | TCTGGAGTTGGAGGAGGAGG+AGG | - | chr7_3:30577955-30577974 | None:intergenic | 60.0% |
| TCCTCCTCCTCCAACTCCAG+AGG | + | chr7_3:30577954-30577973 | Msa1100560:CDS | 60.0% | |
| !! | TCCTCTGGAGTTGGAGGAGG+AGG | - | chr7_3:30577958-30577977 | None:intergenic | 60.0% |
| TCCTCCTCCAACTCCAGAGG+AGG | + | chr7_3:30577957-30577976 | Msa1100560:CDS | 60.0% | |
| !! | TCCTCCTCTGGAGTTGGAGG+AGG | - | chr7_3:30577961-30577980 | None:intergenic | 60.0% |
| TTCCCCAGGTTCGGCAACGA+AGG | + | chr7_3:30578093-30578112 | Msa1100560:CDS | 60.0% | |
| CTCCTTCGTTGCCGAACCTG+GGG | - | chr7_3:30578098-30578117 | None:intergenic | 60.0% | |
| GTCTCCTTCGTTGCCGAACC+TGG | - | chr7_3:30578100-30578119 | None:intergenic | 60.0% | |
| CCTCTTAGCCCCTATGACCG+GGG | + | chr7_3:30578189-30578208 | Msa1100560:CDS | 60.0% | |
| GGCAACCCTTGCCGCAGTAG+TGG | - | chr7_3:30577909-30577928 | None:intergenic | 65.0% | |
| CCCCGGTCATAGGGGCTAAG+AGG | - | chr7_3:30578192-30578211 | None:intergenic | 65.0% | |
| GGCTGGAAGGAATGCGCGAC+CGG | + | chr7_3:30578579-30578598 | Msa1100560:CDS | 65.0% | |
| GCTGGAAGGAATGCGCGACC+GGG | + | chr7_3:30578580-30578599 | Msa1100560:CDS | 65.0% | |
| GGCAACCCTTGCCGCAGTAG+TGG | - | chr7_3:30577909-30577928 | None:intergenic | 65.0% | |
| CCCCGGTCATAGGGGCTAAG+AGG | - | chr7_3:30578192-30578211 | None:intergenic | 65.0% | |
| GGCTGGAAGGAATGCGCGAC+CGG | + | chr7_3:30578579-30578598 | Msa1100560:CDS | 65.0% | |
| GCTGGAAGGAATGCGCGACC+GGG | + | chr7_3:30578580-30578599 | Msa1100560:CDS | 65.0% | |
| GGAAGGAATGCGCGACCGGG+TGG | + | chr7_3:30578583-30578602 | Msa1100560:CDS | 70.0% | |
| GGAAGGAATGCGCGACCGGG+TGG | + | chr7_3:30578583-30578602 | Msa1100560:CDS | 70.0% | |
| GGAATGCGCGACCGGGTGGC+TGG | + | chr7_3:30578587-30578606 | Msa1100560:CDS | 75.0% | |
| GGAATGCGCGACCGGGTGGC+TGG | + | chr7_3:30578587-30578606 | Msa1100560:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 30577727 | 30578722 | 30577727 | ID=Msa1100560;Name=Msa1100560 |
| chr7_3 | mRNA | 30577727 | 30578722 | 30577727 | ID=Msa1100560-mRNA-1;Parent=Msa1100560;Name=Msa1100560-mRNA-1;_AED=0.27;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|331 |
| chr7_3 | exon | 30577727 | 30578722 | 30577727 | ID=Msa1100560-mRNA-1:exon:6482;Parent=Msa1100560-mRNA-1 |
| chr7_3 | CDS | 30577727 | 30578722 | 30577727 | ID=Msa1100560-mRNA-1:cds;Parent=Msa1100560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
