Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738660 | XP_003616748.1 | 85.846 | 325 | 9 | 1 | 1 | 288 | 1 | 325 | 0.0 | 556 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738660 | sp|A7NY33|PER4_VITVI | 61.491 | 322 | 86 | 2 | 4 | 288 | 1 | 321 | 7.57e-140 | 399 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738660 | G7KH18 | 85.846 | 325 | 9 | 1 | 1 | 288 | 1 | 325 | 0.0 | 556 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012820 | Msa0738660 | 0.830779 | 2.423058e-55 | -8.615850e-47 |
| Msa0036580 | Msa0738660 | 0.861537 | 9.568093e-64 | -8.615850e-47 |
| Msa0059880 | Msa0738660 | 0.830819 | 2.369056e-55 | -8.615850e-47 |
| Msa0061600 | Msa0738660 | 0.848244 | 6.937005e-60 | -8.615850e-47 |
| Msa0093530 | Msa0738660 | 0.824822 | 6.552199e-54 | -8.615850e-47 |
| Msa0106120 | Msa0738660 | 0.834186 | 3.466475e-56 | -8.615850e-47 |
| Msa0106130 | Msa0738660 | 0.847897 | 8.644849e-60 | -8.615850e-47 |
| Msa0605460 | Msa0738660 | 0.814040 | 1.886147e-51 | -8.615850e-47 |
| Msa0630130 | Msa0738660 | 0.838139 | 3.434671e-57 | -8.615850e-47 |
| Msa0639410 | Msa0738660 | 0.819780 | 9.705067e-53 | -8.615850e-47 |
| Msa0645100 | Msa0738660 | 0.816711 | 4.804415e-52 | -8.615850e-47 |
| Msa0645120 | Msa0738660 | 0.831736 | 1.409951e-55 | -8.615850e-47 |
| Msa0646040 | Msa0738660 | 0.805422 | 1.345003e-49 | -8.615850e-47 |
| Msa0668210 | Msa0738660 | 0.813754 | 2.181365e-51 | -8.615850e-47 |
| Msa0668220 | Msa0738660 | 0.808124 | 3.612774e-50 | -8.615850e-47 |
| Msa0668230 | Msa0738660 | 0.812261 | 4.634641e-51 | -8.615850e-47 |
| Msa0672780 | Msa0738660 | 0.802561 | 5.292889e-49 | -8.615850e-47 |
| Msa0684590 | Msa0738660 | 0.840477 | 8.491635e-58 | -8.615850e-47 |
| Msa0684600 | Msa0738660 | 0.846168 | 2.572247e-59 | -8.615850e-47 |
| Msa0684720 | Msa0738660 | 0.804338 | 2.265954e-49 | -8.615850e-47 |
| Msa0720660 | Msa0738660 | 0.801816 | 7.530920e-49 | -8.615850e-47 |
| Msa0721260 | Msa0738660 | 0.808624 | 2.826313e-50 | -8.615850e-47 |
| Msa0727480 | Msa0738660 | 0.801723 | 7.871773e-49 | -8.615850e-47 |
| Msa0728520 | Msa0738660 | 0.817661 | 2.937405e-52 | -8.615850e-47 |
| Msa0735280 | Msa0738660 | 0.822385 | 2.436840e-53 | -8.615850e-47 |
| Msa0738570 | Msa0738660 | 0.845495 | 3.919942e-59 | -8.615850e-47 |
| Msa0738660 | Msa0747500 | 0.803357 | 3.623927e-49 | -8.615850e-47 |
| Msa0738660 | Msa0776540 | 0.814499 | 1.493692e-51 | -8.615850e-47 |
| Msa0738660 | Msa0777070 | 0.800727 | 1.258113e-48 | -8.615850e-47 |
| Msa0738660 | Msa0783580 | 0.839033 | 2.017820e-57 | -8.615850e-47 |
| Msa0738660 | Msa0795330 | 0.807280 | 5.460260e-50 | -8.615850e-47 |
| Msa0738660 | Msa0819110 | 0.847044 | 1.483414e-59 | -8.615850e-47 |
| Msa0738660 | Msa0859230 | 0.866800 | 2.187779e-65 | -8.615850e-47 |
| Msa0738660 | Msa0859250 | 0.878485 | 2.703938e-69 | -8.615850e-47 |
| Msa0738660 | Msa0868870 | 0.806634 | 7.480233e-50 | -8.615850e-47 |
| Msa0738660 | Msa0883610 | 0.834833 | 2.384701e-56 | -8.615850e-47 |
| Msa0738660 | Msa0883640 | 0.814610 | 1.411567e-51 | -8.615850e-47 |
| Msa0738660 | Msa0902340 | 0.810278 | 1.247756e-50 | -8.615850e-47 |
| Msa0738660 | Msa0910570 | 0.883761 | 3.412807e-71 | -8.615850e-47 |
| Msa0738660 | Msa0910830 | 0.822786 | 1.966492e-53 | -8.615850e-47 |
| Msa0738660 | Msa0932930 | 0.811388 | 7.177135e-51 | -8.615850e-47 |
| Msa0738660 | Msa0948460 | 0.856900 | 2.353311e-62 | -8.615850e-47 |
| Msa0738660 | Msa0951060 | 0.808724 | 2.690377e-50 | -8.615850e-47 |
| Msa0738660 | Msa0960090 | 0.816364 | 5.745185e-52 | -8.615850e-47 |
| Msa0738660 | Msa0967820 | 0.813817 | 2.112523e-51 | -8.615850e-47 |
| Msa0738660 | Msa0985250 | 0.845067 | 5.116294e-59 | -8.615850e-47 |
| Msa0738660 | Msa0985260 | 0.808402 | 3.151564e-50 | -8.615850e-47 |
| Msa0738660 | Msa0985290 | 0.864608 | 1.075580e-64 | -8.615850e-47 |
| Msa0738660 | Msa0985700 | 0.814390 | 1.578658e-51 | -8.615850e-47 |
| Msa0738660 | Msa1003240 | 0.806348 | 8.593161e-50 | -8.615850e-47 |
| Msa0738660 | Msa1024350 | 0.827787 | 1.289662e-54 | -8.615850e-47 |
| Msa0738660 | Msa1046220 | 0.811149 | 8.086611e-51 | -8.615850e-47 |
| Msa0738660 | Msa1061670 | 0.801482 | 8.819084e-49 | -8.615850e-47 |
| Msa0738660 | Msa1079610 | -0.807273 | 5.478797e-50 | -8.615850e-47 |
| Msa0738660 | Msa1083100 | 0.830001 | 3.755263e-55 | -8.615850e-47 |
| Msa0738660 | Msa1109880 | 0.800313 | 1.528310e-48 | -8.615850e-47 |
| Msa0738660 | Msa1109890 | 0.827801 | 1.279884e-54 | -8.615850e-47 |
| Msa0738660 | Msa1110040 | 0.815350 | 9.670634e-52 | -8.615850e-47 |
| Msa0738660 | Msa1127940 | 0.803425 | 3.508296e-49 | -8.615850e-47 |
| Msa0738660 | Msa1173290 | 0.811003 | 8.700034e-51 | -8.615850e-47 |
| Msa0738660 | Msa1207480 | 0.803046 | 4.202480e-49 | -8.615850e-47 |
| Msa0738660 | Msa1208910 | 0.810260 | 1.259243e-50 | -8.615850e-47 |
| Msa0738660 | Msa1216600 | 0.814574 | 1.437810e-51 | -8.615850e-47 |
| Msa0738660 | Msa1221170 | 0.817470 | 3.244132e-52 | -8.615850e-47 |
| Msa0738660 | Msa1222030 | 0.802191 | 6.307159e-49 | -8.615850e-47 |
| Msa0738660 | Msa1265500 | 0.817269 | 3.599025e-52 | -8.615850e-47 |
| Msa0738660 | Msa1296870 | 0.837980 | 3.772191e-57 | -8.615850e-47 |
| Msa0738660 | Msa1323030 | 0.821644 | 3.618101e-53 | -8.615850e-47 |
| Msa0738660 | Msa1323150 | 0.829162 | 6.005789e-55 | -8.615850e-47 |
| Msa0738660 | Msa1323160 | 0.818630 | 1.773551e-52 | -8.615850e-47 |
| Msa0738660 | Msa1370930 | 0.811425 | 7.045114e-51 | -8.615850e-47 |
| Msa0738660 | Msa1390040 | 0.803178 | 3.945337e-49 | -8.615850e-47 |
| Msa0738660 | Msa1395690 | 0.875885 | 2.165800e-68 | -8.615850e-47 |
| Msa0738660 | Msa1398110 | 0.808443 | 3.088900e-50 | -8.615850e-47 |
| Msa0738660 | Msa1415120 | -0.803978 | 2.692817e-49 | -8.615850e-47 |
| Msa0738660 | Msa1418190 | 0.835925 | 1.262882e-56 | -8.615850e-47 |
| Msa0738660 | Msa1419210 | 0.806997 | 6.268273e-50 | -8.615850e-47 |
| Msa0738660 | Msa1426420 | 0.802812 | 4.697765e-49 | -8.615850e-47 |
| Msa0738660 | Msa1448150 | 0.812150 | 4.900413e-51 | -8.615850e-47 |
| Msa0126960 | Msa0738660 | 0.823834 | 1.119176e-53 | -8.615850e-47 |
| Msa0139270 | Msa0738660 | 0.858251 | 9.363658e-63 | -8.615850e-47 |
| Msa0139460 | Msa0738660 | 0.807349 | 5.278693e-50 | -8.615850e-47 |
| Msa0150910 | Msa0738660 | 0.806764 | 7.020925e-50 | -8.615850e-47 |
| Msa0176620 | Msa0738660 | 0.871834 | 5.051700e-67 | -8.615850e-47 |
| Msa0197750 | Msa0738660 | 0.835203 | 1.923926e-56 | -8.615850e-47 |
| Msa0199860 | Msa0738660 | 0.862875 | 3.717984e-64 | -8.615850e-47 |
| Msa0207930 | Msa0738660 | 0.832851 | 7.468102e-56 | -8.615850e-47 |
| Msa0207970 | Msa0738660 | 0.834695 | 2.582463e-56 | -8.615850e-47 |
| Msa0212550 | Msa0738660 | 0.808777 | 2.621195e-50 | -8.615850e-47 |
| Msa0236610 | Msa0738660 | 0.802686 | 4.986461e-49 | -8.615850e-47 |
| Msa0398690 | Msa0738660 | 0.813699 | 2.243017e-51 | -8.615850e-47 |
| Msa0423680 | Msa0738660 | 0.800408 | 1.461870e-48 | -8.615850e-47 |
| Msa0242390 | Msa0738660 | 0.866443 | 2.839810e-65 | -8.615850e-47 |
| Msa0242700 | Msa0738660 | 0.849298 | 3.537388e-60 | -8.615850e-47 |
| Msa0257930 | Msa0738660 | 0.840022 | 1.116427e-57 | -8.615850e-47 |
| Msa0266640 | Msa0738660 | 0.838164 | 3.383591e-57 | -8.615850e-47 |
| Msa0266650 | Msa0738660 | 0.846821 | 1.707541e-59 | -8.615850e-47 |
| Msa0274260 | Msa0738660 | 0.800793 | 1.219687e-48 | -8.615850e-47 |
| Msa0277280 | Msa0738660 | 0.817412 | 3.341995e-52 | -8.615850e-47 |
| Msa0295520 | Msa0738660 | -0.800247 | 1.576559e-48 | -8.615850e-47 |
| Msa0318370 | Msa0738660 | 0.832323 | 1.009251e-55 | -8.615850e-47 |
| Msa0485290 | Msa0738660 | 0.806757 | 7.045109e-50 | -8.615850e-47 |
| Msa0493710 | Msa0738660 | 0.809300 | 2.025166e-50 | -8.615850e-47 |
| Msa0533510 | Msa0738660 | 0.840090 | 1.072223e-57 | -8.615850e-47 |
| Msa0533520 | Msa0738660 | 0.849392 | 3.329461e-60 | -8.615850e-47 |
| Msa0538450 | Msa0738660 | 0.803420 | 3.516368e-49 | -8.615850e-47 |
| Msa0548760 | Msa0738660 | 0.811689 | 6.174514e-51 | -8.615850e-47 |
| Msa0548970 | Msa0738660 | 0.810520 | 1.106361e-50 | -8.615850e-47 |
| Msa0589720 | Msa0738660 | 0.826855 | 2.157137e-54 | -8.615850e-47 |
| Msa0589730 | Msa0738660 | 0.840504 | 8.353943e-58 | -8.615850e-47 |
| Msa0589750 | Msa0738660 | 0.813790 | 2.141332e-51 | -8.615850e-47 |
| Msa0594320 | Msa0738660 | 0.809242 | 2.084961e-50 | -8.615850e-47 |
| Msa0594330 | Msa0738660 | 0.819754 | 9.836957e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738660 | MtrunA17_Chr5g0438021 | 85.846 | 325 | 9 | 1 | 1 | 288 | 1 | 325 | 0.0 | 556 |
| Msa0738660 | MtrunA17_Chr3g0129061 | 70.927 | 313 | 53 | 2 | 13 | 288 | 11 | 322 | 4.83e-150 | 422 |
| Msa0738660 | MtrunA17_Chr3g0129051 | 65.538 | 325 | 72 | 3 | 1 | 288 | 1 | 322 | 2.86e-143 | 405 |
| Msa0738660 | MtrunA17_Chr3g0129041 | 68.051 | 313 | 62 | 2 | 13 | 288 | 11 | 322 | 4.98e-140 | 397 |
| Msa0738660 | MtrunA17_Chr3g0106921 | 59.871 | 309 | 86 | 1 | 18 | 288 | 12 | 320 | 1.55e-133 | 380 |
| Msa0738660 | MtrunA17_Chr5g0432441 | 54.769 | 325 | 108 | 2 | 3 | 288 | 2 | 326 | 2.49e-122 | 352 |
| Msa0738660 | MtrunA17_Chr2g0320071 | 54.462 | 325 | 103 | 4 | 1 | 288 | 1 | 317 | 7.75e-117 | 338 |
| Msa0738660 | MtrunA17_Chr2g0320101 | 52.615 | 325 | 109 | 4 | 1 | 288 | 1 | 317 | 2.32e-113 | 329 |
| Msa0738660 | MtrunA17_Chr4g0038151 | 54.062 | 320 | 105 | 4 | 8 | 288 | 5 | 321 | 2.51e-113 | 329 |
| Msa0738660 | MtrunA17_Chr3g0114451 | 54.375 | 320 | 105 | 3 | 8 | 288 | 1 | 318 | 3.18e-113 | 329 |
| Msa0738660 | MtrunA17_Chr2g0320061 | 53.125 | 320 | 109 | 5 | 7 | 288 | 2 | 318 | 2.13e-111 | 324 |
| Msa0738660 | MtrunA17_Chr2g0320091 | 52.615 | 325 | 110 | 4 | 1 | 288 | 1 | 318 | 3.12e-111 | 324 |
| Msa0738660 | MtrunA17_Chr7g0244461 | 53.094 | 307 | 105 | 2 | 19 | 288 | 8 | 312 | 3.66e-111 | 323 |
| Msa0738660 | MtrunA17_Chr4g0043391 | 52.795 | 322 | 112 | 4 | 7 | 288 | 3 | 324 | 5.06e-111 | 323 |
| Msa0738660 | MtrunA17_Chr4g0038161 | 53.125 | 320 | 107 | 5 | 8 | 288 | 5 | 320 | 3.23e-110 | 322 |
| Msa0738660 | MtrunA17_Chr2g0320051 | 51.875 | 320 | 113 | 4 | 7 | 288 | 2 | 318 | 6.41e-110 | 321 |
| Msa0738660 | MtrunA17_Chr4g0038171 | 53.846 | 312 | 102 | 5 | 17 | 288 | 12 | 321 | 1.10e-108 | 318 |
| Msa0738660 | MtrunA17_Chr7g0244451 | 52.922 | 308 | 106 | 2 | 18 | 288 | 11 | 316 | 3.15e-108 | 316 |
| Msa0738660 | MtrunA17_Chr2g0320031 | 50.476 | 315 | 116 | 4 | 12 | 288 | 7 | 319 | 3.11e-106 | 311 |
| Msa0738660 | MtrunA17_Chr3g0106901 | 53.968 | 315 | 105 | 3 | 11 | 288 | 12 | 323 | 3.01e-105 | 309 |
| Msa0738660 | MtrunA17_Chr4g0013171 | 50.799 | 313 | 112 | 4 | 16 | 288 | 11 | 321 | 1.06e-103 | 305 |
| Msa0738660 | MtrunA17_Chr5g0432331 | 50.307 | 326 | 116 | 7 | 6 | 288 | 30 | 352 | 9.24e-99 | 293 |
| Msa0738660 | MtrunA17_Chr4g0013181 | 51.361 | 294 | 102 | 3 | 34 | 288 | 62 | 353 | 1.32e-98 | 293 |
| Msa0738660 | MtrunA17_Chr4g0013201 | 46.688 | 317 | 129 | 3 | 10 | 288 | 24 | 338 | 1.75e-97 | 290 |
| Msa0738660 | MtrunA17_Chr4g0013191 | 48.797 | 291 | 112 | 1 | 35 | 288 | 50 | 340 | 2.10e-97 | 290 |
| Msa0738660 | MtrunA17_Chr5g0432351 | 50.993 | 302 | 103 | 6 | 29 | 288 | 23 | 321 | 1.99e-95 | 284 |
| Msa0738660 | MtrunA17_Chr7g0224371 | 47.840 | 324 | 124 | 6 | 7 | 288 | 2 | 322 | 2.37e-95 | 284 |
| Msa0738660 | MtrunA17_Chr1g0213061 | 49.196 | 311 | 116 | 5 | 18 | 288 | 13 | 321 | 2.42e-94 | 281 |
| Msa0738660 | MtrunA17_Chr5g0432341 | 48.765 | 324 | 120 | 7 | 8 | 288 | 1 | 321 | 3.64e-94 | 281 |
| Msa0738660 | MtrunA17_Chr5g0404721 | 46.865 | 303 | 114 | 4 | 31 | 288 | 30 | 330 | 6.46e-90 | 270 |
| Msa0738660 | MtrunA17_Chr5g0432401 | 52.234 | 291 | 122 | 9 | 6 | 287 | 3 | 285 | 1.76e-89 | 268 |
| Msa0738660 | MtrunA17_Chr3g0107881 | 47.039 | 304 | 117 | 5 | 27 | 288 | 23 | 324 | 4.01e-88 | 265 |
| Msa0738660 | MtrunA17_Chr8g0372601 | 46.535 | 303 | 115 | 4 | 31 | 288 | 30 | 330 | 8.07e-86 | 260 |
| Msa0738660 | MtrunA17_Chr5g0402571 | 42.813 | 327 | 141 | 4 | 5 | 288 | 3 | 326 | 6.48e-82 | 249 |
| Msa0738660 | MtrunA17_Chr4g0068621 | 42.727 | 330 | 136 | 4 | 12 | 288 | 7 | 336 | 1.08e-81 | 249 |
| Msa0738660 | MtrunA17_Chr4g0070951 | 45.981 | 311 | 116 | 6 | 26 | 288 | 23 | 329 | 4.74e-81 | 248 |
| Msa0738660 | MtrunA17_Chr5g0402581 | 44.224 | 303 | 125 | 3 | 29 | 288 | 25 | 326 | 5.10e-81 | 247 |
| Msa0738660 | MtrunA17_Chr7g0258811 | 41.562 | 320 | 138 | 6 | 16 | 288 | 54 | 371 | 5.88e-81 | 249 |
| Msa0738660 | MtrunA17_Chr1g0155611 | 44.079 | 304 | 122 | 4 | 31 | 288 | 46 | 347 | 4.33e-79 | 243 |
| Msa0738660 | MtrunA17_Chr1g0175561 | 42.284 | 324 | 133 | 7 | 13 | 288 | 9 | 326 | 8.50e-79 | 242 |
| Msa0738660 | MtrunA17_Chr5g0400331 | 44.156 | 308 | 120 | 4 | 31 | 288 | 26 | 331 | 2.11e-77 | 238 |
| Msa0738660 | MtrunA17_Chr2g0299691 | 44.172 | 326 | 126 | 8 | 15 | 288 | 37 | 358 | 3.11e-77 | 239 |
| Msa0738660 | MtrunA17_Chr2g0292271 | 41.304 | 322 | 138 | 5 | 16 | 288 | 11 | 330 | 3.05e-75 | 233 |
| Msa0738660 | MtrunA17_Chr2g0292091 | 40.184 | 326 | 145 | 6 | 9 | 288 | 4 | 325 | 4.04e-74 | 230 |
| Msa0738660 | MtrunA17_Chr2g0292151 | 40.361 | 332 | 142 | 7 | 7 | 288 | 5 | 330 | 6.02e-74 | 230 |
| Msa0738660 | MtrunA17_Chr4g0013821 | 40.625 | 320 | 141 | 5 | 13 | 288 | 10 | 324 | 2.34e-72 | 226 |
| Msa0738660 | MtrunA17_Chr2g0292101 | 39.938 | 323 | 146 | 4 | 12 | 288 | 6 | 326 | 3.43e-72 | 225 |
| Msa0738660 | MtrunA17_Chr2g0291751 | 39.820 | 334 | 151 | 6 | 1 | 288 | 1 | 330 | 5.99e-72 | 225 |
| Msa0738660 | MtrunA17_Chr2g0292181 | 40.125 | 319 | 139 | 5 | 20 | 288 | 23 | 339 | 1.59e-71 | 224 |
| Msa0738660 | MtrunA17_Chr2g0292241 | 39.198 | 324 | 148 | 5 | 12 | 288 | 9 | 330 | 6.52e-71 | 223 |
| Msa0738660 | MtrunA17_Chr2g0292211 | 39.935 | 308 | 137 | 4 | 27 | 288 | 36 | 341 | 3.05e-70 | 221 |
| Msa0738660 | MtrunA17_Chr4g0013721 | 40.323 | 310 | 136 | 5 | 23 | 288 | 92 | 396 | 3.68e-70 | 222 |
| Msa0738660 | MtrunA17_Chr2g0292111 | 39.482 | 309 | 139 | 5 | 26 | 288 | 24 | 330 | 2.25e-69 | 218 |
| Msa0738660 | MtrunA17_Chr2g0292251 | 38.835 | 309 | 141 | 4 | 26 | 288 | 23 | 329 | 4.32e-68 | 215 |
| Msa0738660 | MtrunA17_Chr6g0477071 | 38.750 | 320 | 153 | 6 | 6 | 288 | 29 | 342 | 4.46e-68 | 215 |
| Msa0738660 | MtrunA17_Chr5g0421411 | 41.522 | 289 | 114 | 6 | 51 | 288 | 1 | 285 | 1.40e-67 | 212 |
| Msa0738660 | MtrunA17_Chr1g0188431 | 37.695 | 321 | 154 | 6 | 8 | 288 | 13 | 327 | 1.28e-65 | 208 |
| Msa0738660 | MtrunA17_Chr2g0292261 | 39.024 | 328 | 148 | 5 | 11 | 288 | 5 | 330 | 1.49e-65 | 209 |
| Msa0738660 | MtrunA17_Chr2g0292291 | 36.364 | 319 | 152 | 5 | 20 | 288 | 15 | 332 | 3.20e-65 | 208 |
| Msa0738660 | MtrunA17_Chr3g0128061 | 36.760 | 321 | 153 | 6 | 16 | 288 | 8 | 326 | 1.05e-60 | 195 |
| Msa0738660 | MtrunA17_Chr4g0063671 | 37.117 | 326 | 150 | 8 | 12 | 288 | 1 | 320 | 7.83e-60 | 193 |
| Msa0738660 | MtrunA17_Chr4g0024121 | 36.137 | 321 | 155 | 5 | 12 | 288 | 12 | 326 | 6.98e-59 | 191 |
| Msa0738660 | MtrunA17_Chr1g0157051 | 35.294 | 323 | 160 | 6 | 8 | 287 | 1 | 317 | 3.68e-58 | 189 |
| Msa0738660 | MtrunA17_Chr2g0279041 | 35.802 | 324 | 152 | 7 | 12 | 288 | 11 | 325 | 2.33e-57 | 187 |
| Msa0738660 | MtrunA17_Chr1g0204011 | 34.591 | 318 | 158 | 6 | 14 | 288 | 12 | 322 | 7.49e-57 | 185 |
| Msa0738660 | MtrunA17_Chr1g0194151 | 35.152 | 330 | 165 | 5 | 8 | 288 | 4 | 333 | 1.14e-56 | 185 |
| Msa0738660 | MtrunA17_Chr7g0225221 | 34.675 | 323 | 165 | 6 | 9 | 288 | 1 | 320 | 1.15e-56 | 185 |
| Msa0738660 | MtrunA17_Chr5g0405991 | 34.891 | 321 | 158 | 7 | 12 | 288 | 3 | 316 | 1.46e-56 | 184 |
| Msa0738660 | MtrunA17_Chr1g0164891 | 37.874 | 301 | 139 | 6 | 35 | 288 | 93 | 392 | 4.10e-55 | 183 |
| Msa0738660 | MtrunA17_Chr8g0371381 | 35.762 | 302 | 144 | 6 | 30 | 288 | 25 | 319 | 4.50e-55 | 181 |
| Msa0738660 | MtrunA17_Chr4g0076211 | 35.570 | 298 | 139 | 7 | 35 | 288 | 45 | 333 | 1.37e-53 | 177 |
| Msa0738660 | MtrunA17_Chr7g0268501 | 33.436 | 326 | 166 | 7 | 8 | 288 | 1 | 320 | 2.97e-53 | 176 |
| Msa0738660 | MtrunA17_Chr7g0268521 | 33.436 | 326 | 166 | 7 | 8 | 288 | 1 | 320 | 2.97e-53 | 176 |
| Msa0738660 | MtrunA17_Chr2g0322861 | 34.328 | 335 | 167 | 9 | 2 | 288 | 57 | 386 | 7.11e-53 | 177 |
| Msa0738660 | MtrunA17_Chr7g0254201 | 34.564 | 298 | 158 | 3 | 27 | 288 | 16 | 312 | 3.03e-52 | 173 |
| Msa0738660 | MtrunA17_Chr6g0460711 | 33.648 | 318 | 168 | 5 | 8 | 288 | 3 | 314 | 4.35e-52 | 173 |
| Msa0738660 | MtrunA17_Chr1g0194271 | 34.320 | 338 | 164 | 7 | 8 | 288 | 4 | 340 | 2.49e-51 | 172 |
| Msa0738660 | MtrunA17_Chr6g0467251 | 34.259 | 324 | 161 | 7 | 12 | 288 | 10 | 328 | 8.41e-51 | 170 |
| Msa0738660 | MtrunA17_Chr2g0296621 | 37.294 | 303 | 134 | 8 | 31 | 288 | 50 | 341 | 1.07e-50 | 170 |
| Msa0738660 | MtrunA17_Chr3g0136751 | 31.677 | 322 | 168 | 4 | 13 | 288 | 7 | 322 | 1.08e-50 | 169 |
| Msa0738660 | MtrunA17_Chr1g0148021 | 34.347 | 329 | 163 | 8 | 9 | 288 | 4 | 328 | 4.91e-50 | 168 |
| Msa0738660 | MtrunA17_Chr7g0254231 | 32.770 | 296 | 159 | 4 | 29 | 288 | 20 | 311 | 4.28e-49 | 165 |
| Msa0738660 | MtrunA17_Chr6g0467161 | 35.235 | 298 | 147 | 5 | 31 | 288 | 45 | 336 | 5.92e-49 | 165 |
| Msa0738660 | MtrunA17_Chr4g0075241 | 30.982 | 326 | 178 | 4 | 9 | 288 | 3 | 327 | 7.93e-49 | 165 |
| Msa0738660 | MtrunA17_Chr2g0316191 | 33.233 | 331 | 145 | 8 | 29 | 284 | 74 | 403 | 1.52e-48 | 166 |
| Msa0738660 | MtrunA17_Chr2g0329641 | 32.727 | 330 | 164 | 7 | 12 | 288 | 11 | 335 | 1.98e-48 | 164 |
| Msa0738660 | MtrunA17_Chr1g0197411 | 32.298 | 322 | 169 | 6 | 14 | 288 | 11 | 330 | 4.02e-48 | 163 |
| Msa0738660 | MtrunA17_Chr2g0278671 | 33.546 | 313 | 154 | 7 | 24 | 288 | 17 | 323 | 9.09e-48 | 162 |
| Msa0738660 | MtrunA17_Chr2g0316481 | 33.030 | 330 | 146 | 8 | 29 | 284 | 74 | 402 | 1.34e-47 | 164 |
| Msa0738660 | MtrunA17_Chr2g0316791 | 33.030 | 330 | 146 | 8 | 29 | 284 | 74 | 402 | 1.44e-47 | 164 |
| Msa0738660 | MtrunA17_Chr2g0316831 | 32.727 | 330 | 147 | 8 | 29 | 284 | 110 | 438 | 2.41e-47 | 164 |
| Msa0738660 | MtrunA17_Chr5g0401431 | 32.416 | 327 | 159 | 7 | 13 | 284 | 6 | 325 | 4.16e-47 | 160 |
| Msa0738660 | MtrunA17_Chr4g0046131 | 34.323 | 303 | 150 | 6 | 30 | 284 | 41 | 342 | 5.53e-47 | 160 |
| Msa0738660 | MtrunA17_Chr3g0114491 | 69.444 | 108 | 33 | 0 | 31 | 138 | 18 | 125 | 7.33e-47 | 154 |
| Msa0738660 | MtrunA17_Chr3g0114461 | 45.161 | 186 | 62 | 3 | 141 | 288 | 9 | 192 | 1.51e-46 | 154 |
| Msa0738660 | MtrunA17_Chr1g0181511 | 31.894 | 301 | 162 | 5 | 29 | 288 | 25 | 323 | 1.83e-46 | 158 |
| Msa0738660 | MtrunA17_Chr2g0279061 | 37.548 | 261 | 110 | 6 | 75 | 288 | 12 | 266 | 6.23e-45 | 153 |
| Msa0738660 | MtrunA17_Chr8g0364291 | 32.808 | 317 | 169 | 5 | 16 | 288 | 8 | 324 | 1.42e-44 | 154 |
| Msa0738660 | MtrunA17_Chr6g0467121 | 32.997 | 297 | 153 | 7 | 31 | 288 | 74 | 363 | 1.55e-44 | 155 |
| Msa0738660 | MtrunA17_Chr4g0072091 | 32.248 | 307 | 152 | 7 | 31 | 288 | 24 | 323 | 2.23e-44 | 153 |
| Msa0738660 | MtrunA17_Chr4g0053871 | 31.579 | 323 | 165 | 8 | 11 | 284 | 5 | 320 | 1.16e-43 | 151 |
| Msa0738660 | MtrunA17_Chr1g0181431 | 30.333 | 300 | 168 | 4 | 29 | 288 | 25 | 323 | 3.12e-43 | 150 |
| Msa0738660 | MtrunA17_Chr1g0181481 | 30.667 | 300 | 167 | 4 | 29 | 288 | 25 | 323 | 4.57e-43 | 149 |
| Msa0738660 | MtrunA17_Chr6g0451571 | 30.189 | 318 | 167 | 6 | 20 | 288 | 23 | 334 | 1.88e-42 | 148 |
| Msa0738660 | MtrunA17_Chr4g0074851 | 29.936 | 314 | 177 | 5 | 13 | 284 | 12 | 324 | 3.18e-41 | 145 |
| Msa0738660 | MtrunA17_Chr2g0311241 | 28.342 | 374 | 151 | 9 | 29 | 287 | 58 | 429 | 7.58e-39 | 141 |
| Msa0738660 | MtrunA17_Chr2g0311251 | 30.448 | 335 | 153 | 10 | 29 | 287 | 9 | 339 | 3.51e-37 | 134 |
| Msa0738660 | MtrunA17_Chr5g0413051 | 32.177 | 317 | 156 | 8 | 25 | 288 | 67 | 377 | 1.82e-35 | 131 |
| Msa0738660 | MtrunA17_Chr2g0316811 | 46.970 | 132 | 67 | 2 | 29 | 158 | 48 | 178 | 4.12e-34 | 126 |
| Msa0738660 | MtrunA17_Chr2g0316141 | 31.481 | 270 | 126 | 8 | 77 | 288 | 11 | 279 | 1.09e-28 | 110 |
| Msa0738660 | MtrunA17_Chr2g0316181 | 31.481 | 270 | 126 | 8 | 77 | 288 | 11 | 279 | 1.09e-28 | 110 |
| Msa0738660 | MtrunA17_Chr4g0004591 | 25.078 | 319 | 137 | 5 | 31 | 287 | 77 | 355 | 1.96e-25 | 103 |
| Msa0738660 | MtrunA17_Chr5g0432361 | 51.111 | 90 | 41 | 2 | 200 | 287 | 20 | 108 | 1.95e-24 | 94.7 |
| Msa0738660 | MtrunA17_Chr2g0292281 | 31.604 | 212 | 87 | 5 | 123 | 288 | 17 | 216 | 1.92e-22 | 93.2 |
| Msa0738660 | MtrunA17_Chr3g0104101 | 37.410 | 139 | 75 | 4 | 161 | 288 | 12 | 149 | 2.03e-20 | 85.5 |
| Msa0738660 | MtrunA17_Chr6g0468731 | 56.944 | 72 | 27 | 2 | 70 | 141 | 22 | 89 | 1.02e-19 | 82.0 |
| Msa0738660 | MtrunA17_Chr1g0181491 | 37.719 | 114 | 69 | 2 | 28 | 141 | 9 | 120 | 2.78e-19 | 82.4 |
| Msa0738660 | MtrunA17_Chr5g0432321 | 52.632 | 76 | 33 | 2 | 158 | 233 | 60 | 132 | 4.74e-19 | 81.3 |
| Msa0738660 | MtrunA17_Chr1g0196191 | 53.623 | 69 | 31 | 1 | 70 | 138 | 24 | 91 | 1.19e-14 | 70.1 |
| Msa0738660 | MtrunA17_Chr1g0181501 | 30.303 | 132 | 89 | 2 | 160 | 288 | 58 | 189 | 1.40e-14 | 70.9 |
| Msa0738660 | MtrunA17_Chr3g0137751 | 26.818 | 220 | 131 | 6 | 63 | 267 | 106 | 310 | 6.17e-13 | 68.2 |
| Msa0738660 | MtrunA17_Chr7g0268491 | 40.476 | 84 | 49 | 1 | 205 | 288 | 15 | 97 | 2.43e-12 | 62.0 |
| Msa0738660 | MtrunA17_Chr7g0254181 | 50.000 | 52 | 26 | 0 | 103 | 154 | 31 | 82 | 3.14e-11 | 60.5 |
| Msa0738660 | MtrunA17_Chr7g0254171 | 38.889 | 72 | 43 | 1 | 77 | 148 | 4 | 74 | 3.31e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738660 | AT5G05340.1 | 62.963 | 297 | 73 | 1 | 29 | 288 | 28 | 324 | 8.90e-133 | 379 |
| Msa0738660 | AT5G58400.1 | 58.387 | 310 | 90 | 2 | 18 | 288 | 16 | 325 | 4.56e-121 | 350 |
| Msa0738660 | AT5G58390.1 | 54.603 | 315 | 105 | 1 | 12 | 288 | 2 | 316 | 5.40e-113 | 329 |
| Msa0738660 | AT1G14550.1 | 49.841 | 315 | 112 | 5 | 18 | 288 | 9 | 321 | 1.06e-97 | 290 |
| Msa0738660 | AT1G14540.1 | 47.634 | 317 | 123 | 5 | 13 | 288 | 1 | 315 | 4.99e-94 | 280 |
| Msa0738660 | AT4G36430.1 | 46.250 | 320 | 124 | 5 | 14 | 288 | 14 | 330 | 7.78e-92 | 275 |
| Msa0738660 | AT2G18140.1 | 45.484 | 310 | 122 | 4 | 24 | 288 | 28 | 335 | 4.93e-89 | 268 |
| Msa0738660 | AT2G18150.1 | 44.984 | 309 | 123 | 4 | 25 | 288 | 30 | 336 | 3.48e-88 | 266 |
| Msa0738660 | AT5G66390.1 | 43.881 | 335 | 139 | 6 | 1 | 288 | 1 | 333 | 2.34e-86 | 262 |
| Msa0738660 | AT3G50990.1 | 45.779 | 308 | 120 | 5 | 26 | 288 | 36 | 341 | 4.15e-85 | 259 |
| Msa0738660 | AT5G06720.1 | 42.042 | 333 | 138 | 6 | 9 | 288 | 3 | 333 | 4.96e-85 | 258 |
| Msa0738660 | AT1G44970.1 | 46.129 | 310 | 119 | 4 | 25 | 288 | 39 | 346 | 2.95e-84 | 256 |
| Msa0738660 | AT5G06730.1 | 41.369 | 336 | 147 | 6 | 1 | 288 | 1 | 334 | 4.40e-82 | 251 |
| Msa0738660 | AT5G19890.1 | 44.753 | 324 | 123 | 7 | 12 | 288 | 13 | 327 | 3.58e-81 | 248 |
| Msa0738660 | AT3G32980.1 | 41.818 | 330 | 140 | 5 | 7 | 288 | 9 | 334 | 1.06e-79 | 245 |
| Msa0738660 | AT1G68850.1 | 38.507 | 335 | 151 | 7 | 4 | 288 | 6 | 335 | 4.05e-78 | 241 |
| Msa0738660 | AT2G38380.1 | 39.879 | 331 | 146 | 6 | 5 | 288 | 9 | 333 | 6.10e-78 | 241 |
| Msa0738660 | AT4G08770.1 | 41.587 | 315 | 134 | 4 | 22 | 288 | 15 | 327 | 4.14e-77 | 238 |
| Msa0738660 | AT2G38390.1 | 39.275 | 331 | 148 | 6 | 5 | 288 | 9 | 333 | 6.19e-77 | 238 |
| Msa0738660 | AT2G35380.1 | 42.090 | 335 | 137 | 5 | 9 | 288 | 3 | 335 | 1.20e-76 | 237 |
| Msa0738660 | AT4G08780.1 | 40.764 | 314 | 136 | 4 | 23 | 288 | 16 | 327 | 9.06e-76 | 235 |
| Msa0738660 | AT4G16270.1 | 44.295 | 298 | 117 | 5 | 36 | 288 | 55 | 348 | 1.18e-74 | 232 |
| Msa0738660 | AT3G49120.1 | 40.923 | 325 | 141 | 5 | 12 | 288 | 14 | 335 | 7.64e-74 | 230 |
| Msa0738660 | AT3G49110.1 | 39.692 | 325 | 138 | 5 | 12 | 288 | 22 | 336 | 3.98e-73 | 228 |
| Msa0738660 | AT1G49570.1 | 42.715 | 302 | 126 | 4 | 29 | 284 | 46 | 346 | 3.62e-72 | 226 |
| Msa0738660 | AT5G19880.1 | 39.077 | 325 | 146 | 6 | 14 | 288 | 7 | 329 | 5.75e-70 | 219 |
| Msa0738660 | AT2G22420.1 | 38.037 | 326 | 150 | 6 | 7 | 288 | 2 | 319 | 2.12e-67 | 213 |
| Msa0738660 | AT2G41480.1 | 38.889 | 324 | 143 | 8 | 14 | 288 | 11 | 328 | 3.13e-63 | 202 |
| Msa0738660 | AT4G33420.1 | 39.322 | 295 | 136 | 5 | 31 | 288 | 37 | 325 | 2.19e-61 | 197 |
| Msa0738660 | AT3G01190.1 | 36.875 | 320 | 154 | 6 | 12 | 288 | 7 | 321 | 2.51e-61 | 197 |
| Msa0738660 | AT4G33420.2 | 39.322 | 295 | 136 | 5 | 31 | 288 | 84 | 372 | 9.14e-61 | 197 |
| Msa0738660 | AT5G17820.1 | 36.825 | 315 | 146 | 6 | 17 | 288 | 9 | 313 | 1.32e-60 | 195 |
| Msa0738660 | AT1G05240.1 | 36.213 | 301 | 140 | 6 | 31 | 284 | 26 | 321 | 1.77e-60 | 195 |
| Msa0738660 | AT1G05250.1 | 36.213 | 301 | 140 | 6 | 31 | 284 | 26 | 321 | 1.77e-60 | 195 |
| Msa0738660 | AT5G64120.1 | 34.862 | 327 | 156 | 8 | 12 | 288 | 9 | 328 | 4.69e-60 | 194 |
| Msa0738660 | AT5G17820.2 | 36.825 | 315 | 146 | 6 | 17 | 288 | 62 | 366 | 1.37e-59 | 194 |
| Msa0738660 | AT5G51890.1 | 35.312 | 320 | 160 | 6 | 12 | 288 | 7 | 322 | 1.18e-56 | 185 |
| Msa0738660 | AT3G03670.1 | 35.535 | 318 | 152 | 5 | 18 | 288 | 10 | 321 | 1.56e-56 | 185 |
| Msa0738660 | AT5G42180.1 | 36.111 | 324 | 146 | 7 | 13 | 287 | 5 | 316 | 7.03e-56 | 183 |
| Msa0738660 | AT1G71695.1 | 34.448 | 299 | 152 | 4 | 31 | 288 | 44 | 339 | 2.87e-55 | 182 |
| Msa0738660 | AT5G15180.1 | 35.077 | 325 | 155 | 8 | 15 | 288 | 10 | 329 | 5.57e-55 | 181 |
| Msa0738660 | AT5G39580.1 | 36.364 | 297 | 140 | 6 | 35 | 288 | 29 | 319 | 3.21e-54 | 179 |
| Msa0738660 | AT5G14130.1 | 32.919 | 322 | 167 | 5 | 12 | 288 | 13 | 330 | 3.58e-54 | 179 |
| Msa0738660 | AT5G14130.2 | 32.919 | 322 | 167 | 5 | 12 | 288 | 54 | 371 | 9.50e-54 | 179 |
| Msa0738660 | AT1G34510.1 | 34.884 | 301 | 154 | 5 | 24 | 288 | 15 | 309 | 1.70e-53 | 177 |
| Msa0738660 | AT5G67400.1 | 34.940 | 332 | 157 | 7 | 13 | 288 | 1 | 329 | 4.47e-53 | 176 |
| Msa0738660 | AT2G35380.2 | 41.870 | 246 | 91 | 4 | 93 | 288 | 4 | 247 | 7.41e-53 | 173 |
| Msa0738660 | AT5G47000.1 | 36.250 | 320 | 159 | 7 | 12 | 288 | 13 | 330 | 1.58e-52 | 175 |
| Msa0738660 | AT5G64110.1 | 35.843 | 332 | 154 | 9 | 10 | 288 | 5 | 330 | 1.14e-51 | 172 |
| Msa0738660 | AT4G17690.1 | 34.783 | 299 | 154 | 4 | 30 | 288 | 25 | 322 | 2.01e-51 | 172 |
| Msa0738660 | AT4G11290.1 | 34.579 | 321 | 157 | 8 | 18 | 288 | 9 | 326 | 4.45e-51 | 171 |
| Msa0738660 | AT3G49960.1 | 34.650 | 329 | 156 | 8 | 12 | 288 | 8 | 329 | 2.12e-50 | 169 |
| Msa0738660 | AT1G30870.1 | 35.526 | 304 | 141 | 6 | 31 | 288 | 51 | 345 | 3.11e-50 | 169 |
| Msa0738660 | AT4G25980.1 | 32.602 | 319 | 160 | 7 | 19 | 288 | 14 | 326 | 3.32e-50 | 169 |
| Msa0738660 | AT4G26010.1 | 33.544 | 316 | 164 | 5 | 9 | 288 | 4 | 309 | 8.19e-50 | 167 |
| Msa0738660 | AT5G40150.1 | 32.566 | 304 | 162 | 5 | 26 | 288 | 27 | 328 | 9.74e-50 | 167 |
| Msa0738660 | AT5G64100.1 | 34.337 | 332 | 155 | 8 | 12 | 288 | 8 | 331 | 1.01e-49 | 167 |
| Msa0738660 | AT4G37530.1 | 33.333 | 318 | 153 | 6 | 23 | 288 | 19 | 329 | 1.16e-49 | 167 |
| Msa0738660 | AT4G26010.2 | 33.544 | 316 | 164 | 5 | 9 | 288 | 32 | 337 | 1.56e-49 | 167 |
| Msa0738660 | AT1G05260.1 | 32.716 | 324 | 166 | 8 | 12 | 288 | 7 | 325 | 1.74e-49 | 167 |
| Msa0738660 | AT4G31760.1 | 33.333 | 330 | 162 | 6 | 5 | 288 | 9 | 326 | 2.84e-49 | 166 |
| Msa0738660 | AT1G77100.1 | 33.333 | 324 | 163 | 8 | 13 | 288 | 1 | 319 | 3.47e-48 | 163 |
| Msa0738660 | AT2G24800.1 | 33.987 | 306 | 151 | 4 | 29 | 288 | 29 | 329 | 8.37e-48 | 162 |
| Msa0738660 | AT4G37520.1 | 32.372 | 312 | 152 | 6 | 29 | 288 | 25 | 329 | 1.31e-47 | 162 |
| Msa0738660 | AT4G33870.1 | 30.120 | 332 | 152 | 5 | 31 | 284 | 68 | 397 | 1.94e-47 | 163 |
| Msa0738660 | AT2G39040.1 | 34.824 | 313 | 153 | 8 | 25 | 288 | 40 | 350 | 4.43e-47 | 161 |
| Msa0738660 | AT2G18980.1 | 33.030 | 330 | 159 | 8 | 7 | 288 | 8 | 323 | 3.31e-46 | 158 |
| Msa0738660 | AT3G28200.1 | 31.475 | 305 | 163 | 5 | 26 | 288 | 16 | 316 | 3.83e-46 | 158 |
| Msa0738660 | AT2G34060.1 | 36.482 | 307 | 144 | 8 | 28 | 285 | 39 | 343 | 4.45e-46 | 158 |
| Msa0738660 | AT3G21770.1 | 31.803 | 305 | 158 | 7 | 26 | 284 | 24 | 324 | 2.22e-45 | 156 |
| Msa0738660 | AT4G37520.2 | 32.051 | 312 | 150 | 7 | 29 | 288 | 25 | 326 | 3.62e-45 | 155 |
| Msa0738660 | AT1G24110.1 | 32.615 | 325 | 167 | 8 | 13 | 288 | 1 | 322 | 2.28e-44 | 153 |
| Msa0738660 | AT4G30170.1 | 32.792 | 308 | 152 | 6 | 29 | 288 | 25 | 325 | 5.73e-44 | 152 |
| Msa0738660 | AT2G43480.1 | 31.329 | 316 | 162 | 7 | 22 | 288 | 26 | 335 | 7.48e-44 | 152 |
| Msa0738660 | AT4G21960.1 | 30.719 | 306 | 171 | 5 | 23 | 288 | 23 | 327 | 1.05e-42 | 149 |
| Msa0738660 | AT5G22410.1 | 32.822 | 326 | 164 | 11 | 9 | 286 | 5 | 323 | 3.26e-42 | 148 |
| Msa0738660 | AT5G24070.1 | 31.250 | 304 | 153 | 7 | 35 | 288 | 38 | 335 | 5.80e-42 | 147 |
| Msa0738660 | AT2G37130.1 | 30.464 | 302 | 168 | 5 | 28 | 288 | 27 | 327 | 2.84e-41 | 145 |
| Msa0738660 | AT4G37530.2 | 34.082 | 267 | 117 | 6 | 23 | 237 | 19 | 278 | 2.15e-40 | 142 |
| Msa0738660 | AT2G37130.2 | 30.405 | 296 | 164 | 5 | 34 | 288 | 2 | 296 | 2.75e-40 | 142 |
| Msa0738660 | AT4G25980.2 | 43.571 | 140 | 76 | 2 | 19 | 158 | 59 | 195 | 2.39e-33 | 124 |
| Msa0738660 | AT2G24800.2 | 46.923 | 130 | 65 | 1 | 29 | 158 | 29 | 154 | 8.49e-33 | 121 |
| Msa0738660 | AT3G17070.1 | 26.727 | 333 | 187 | 5 | 1 | 288 | 19 | 339 | 1.50e-31 | 120 |
| Msa0738660 | AT5G39580.2 | 46.774 | 124 | 62 | 2 | 35 | 158 | 29 | 148 | 5.03e-31 | 116 |
| Msa0738660 | AT3G17070.2 | 25.287 | 261 | 148 | 5 | 73 | 288 | 18 | 276 | 2.38e-18 | 83.2 |
| Msa0738660 | AT4G32320.1 | 29.362 | 235 | 134 | 7 | 50 | 267 | 100 | 319 | 2.27e-12 | 66.6 |
Find 78 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGTTCTGGGGATAATAATT+TGG | 0.288379 | 5_1:+56435205 | Msa0738660:CDS |
| TTCACAGTGTCAAATAGTTT+TGG | 0.292450 | 5_1:-56432946 | None:intergenic |
| AGATTATCTAGTTAATTATA+TGG | 0.305672 | 5_1:+56432807 | Msa0738660:exon |
| GAGAGATAAGAAAGAATTGC+AGG | 0.319158 | 5_1:+56435447 | Msa0738660:CDS |
| TGCCCCAAGACATCAGGTTC+TGG | 0.322210 | 5_1:+56435191 | Msa0738660:CDS |
| GATTCCATAGTGCATGAATA+TGG | 0.337141 | 5_1:+56435341 | Msa0738660:CDS |
| CAAGTTTCACATCCCATGTT+GGG | 0.349153 | 5_1:-56434093 | None:intergenic |
| CAATTGATACAAGAACTAAA+AGG | 0.357497 | 5_1:-56432876 | None:intergenic |
| TTTGCTCGCACAAGGCAATC+AGG | 0.386172 | 5_1:+56435167 | Msa0738660:CDS |
| TGCCAATCCCAACAGAAATT+CGG | 0.407832 | 5_1:+56433726 | Msa0738660:CDS |
| TCCCCAGAACCTGATGTCTT+GGG | 0.411434 | 5_1:-56435194 | None:intergenic |
| CAAGCCATATTCATGCACTA+TGG | 0.414528 | 5_1:-56435345 | None:intergenic |
| ATTCTAAGTGTGAATGTTGA+AGG | 0.422922 | 5_1:+56435634 | Msa0738660:three_prime_UTR |
| ATCCCCAGAACCTGATGTCT+TGG | 0.425960 | 5_1:-56435195 | None:intergenic |
| CATGCGGGTCTCCTTTGATA+TGG | 0.427995 | 5_1:-56432986 | None:intergenic |
| GGACTAGGTGGTCACACAAT+TGG | 0.433074 | 5_1:+56435083 | Msa0738660:intron |
| GCCCCAAGACATCAGGTTCT+GGG | 0.441232 | 5_1:+56435192 | Msa0738660:CDS |
| TCTTATCTCTCCATTTGAAT+CGG | 0.445122 | 5_1:-56435435 | None:intergenic |
| CCACGGGCCGAATTTCTGTT+GGG | 0.448742 | 5_1:-56433733 | None:intergenic |
| CCAAGTTTCACATCCCATGT+TGG | 0.448886 | 5_1:-56434094 | None:intergenic |
| GGCCGAATTTCTGTTGGGAT+TGG | 0.459419 | 5_1:-56433728 | None:intergenic |
| CAAGAACCTAGTTGACAGTA+AGG | 0.460120 | 5_1:+56435274 | Msa0738660:CDS |
| ATCTTTCGAAAGATTAGCAT+TGG | 0.480051 | 5_1:-56432905 | None:intergenic |
| GCTTAAATTTCCCAGCTTGG+AGG | 0.480636 | 5_1:+56434070 | Msa0738660:intron |
| TCAGGGTGCCCCAAGACATC+AGG | 0.480815 | 5_1:+56435185 | Msa0738660:CDS |
| TCTCTGAAGTACAATTAAGA+AGG | 0.482952 | 5_1:-56432787 | None:intergenic |
| ATCCACCATTGAAGAGTTGT+TGG | 0.491131 | 5_1:-56435313 | None:intergenic |
| ACGTTGGTGTTGCAAGATCA+AGG | 0.493377 | 5_1:-56435232 | None:intergenic |
| CCAACATGGGATGTGAAACT+TGG | 0.494973 | 5_1:+56434094 | Msa0738660:CDS |
| TCCGACCAACAACTCTTCAA+TGG | 0.503794 | 5_1:+56435308 | Msa0738660:CDS |
| TCCACGGGCCGAATTTCTGT+TGG | 0.507509 | 5_1:-56433734 | None:intergenic |
| AATTGATACAAGAACTAAAA+GGG | 0.507577 | 5_1:-56432875 | None:intergenic |
| CTCTCCATTTGAATCGGTGA+GGG | 0.519846 | 5_1:-56435429 | None:intergenic |
| CCCAGCTTGGAGGCCCAACA+TGG | 0.520178 | 5_1:+56434080 | Msa0738660:intron |
| AGTCCCCTCACCGATTCAAA+TGG | 0.522033 | 5_1:+56435425 | Msa0738660:CDS |
| AATGTCTCCCATCTTGATCA+TGG | 0.525103 | 5_1:-56435402 | None:intergenic |
| GTCGATCACTTCGAATCCAC+GGG | 0.532124 | 5_1:-56433749 | None:intergenic |
| GATGACACATCAAGCTTCAC+CGG | 0.536161 | 5_1:+56433694 | Msa0738660:CDS |
| TGAAGAGTTGTTGGTCGGAG+TGG | 0.547022 | 5_1:-56435304 | None:intergenic |
| AAACCATTGTAGGGATGTGA+TGG | 0.548386 | 5_1:+56433658 | Msa0738660:intron |
| CGTCACCGCCATGATCAAGA+TGG | 0.548522 | 5_1:+56435394 | Msa0738660:CDS |
| CTTGAAATAGTGATTGTCAA+AGG | 0.552423 | 5_1:-56435255 | None:intergenic |
| AACAGAGTCTCTAGCAGTGA+TGG | 0.555738 | 5_1:-56433833 | None:intergenic |
| TATTTACATTTAAGTCTGGA+TGG | 0.557143 | 5_1:+56435522 | Msa0738660:three_prime_UTR |
| AGCAAAGGAAGTATCTATGT+TGG | 0.559906 | 5_1:-56435150 | None:intergenic |
| ATACTTCCTTTGCTCGCACA+AGG | 0.564893 | 5_1:+56435159 | Msa0738660:CDS |
| TAGAAGAGAAGCACCCATGC+GGG | 0.569776 | 5_1:-56433001 | None:intergenic |
| TGTCGATCACTTCGAATCCA+CGG | 0.573405 | 5_1:-56433750 | None:intergenic |
| TTGCTCGCACAAGGCAATCA+GGG | 0.574883 | 5_1:+56435168 | Msa0738660:CDS |
| CGTTGGTGTTGCAAGATCAA+GGG | 0.577092 | 5_1:-56435231 | None:intergenic |
| ACCATTGAAGAGTTGTTGGT+CGG | 0.577335 | 5_1:-56435309 | None:intergenic |
| CATATCAAAGGAGACCCGCA+TGG | 0.578197 | 5_1:+56432987 | Msa0738660:CDS |
| TTCATGCACTATGGAATCAG+TGG | 0.582013 | 5_1:-56435336 | None:intergenic |
| CCCAACAGAAATTCGGCCCG+TGG | 0.584922 | 5_1:+56433733 | Msa0738660:CDS |
| TGATTGCCTTGTGCGAGCAA+AGG | 0.592651 | 5_1:-56435165 | None:intergenic |
| GTCACCGCCATGATCAAGAT+GGG | 0.592934 | 5_1:+56435395 | Msa0738660:CDS |
| CCCCAGAACCTGATGTCTTG+GGG | 0.596331 | 5_1:-56435193 | None:intergenic |
| AGTCTCTAGCAGTGATGGTG+AGG | 0.603184 | 5_1:-56433828 | None:intergenic |
| GCAGTGGAGAAAGTATGTCC+AGG | 0.603574 | 5_1:+56433784 | Msa0738660:CDS |
| TCAGCGCATGAAACTGCACC+TGG | 0.605024 | 5_1:-56433802 | None:intergenic |
| GTAGTCCCTTACTGTCAACT+AGG | 0.605278 | 5_1:-56435280 | None:intergenic |
| GACCAACAACTCTTCAATGG+TGG | 0.606439 | 5_1:+56435311 | Msa0738660:CDS |
| CCAGCTTGGAGGCCCAACAT+GGG | 0.607919 | 5_1:+56434081 | Msa0738660:intron |
| GTCACACAATTGGACAAGCA+AGG | 0.609025 | 5_1:+56435093 | Msa0738660:CDS |
| AGTTCAATCTGCCATATCAA+AGG | 0.613488 | 5_1:+56432975 | Msa0738660:CDS |
| GTACATTAACAAAGCAATCG+TGG | 0.614906 | 5_1:-56433035 | None:intergenic |
| TGTTGGAGTCGTTGTAAATG+TGG | 0.616544 | 5_1:-56435133 | None:intergenic |
| CGACAAAATCAAGTCAGCAG+TGG | 0.616805 | 5_1:+56433768 | Msa0738660:CDS |
| CCCCAAGACATCAGGTTCTG+GGG | 0.622498 | 5_1:+56435193 | Msa0738660:CDS |
| AAGAACCTAGTTGACAGTAA+GGG | 0.623353 | 5_1:+56435275 | Msa0738660:CDS |
| TCTCTCCATTTGAATCGGTG+AGG | 0.627972 | 5_1:-56435430 | None:intergenic |
| ATATCAAAGGAGACCCGCAT+GGG | 0.639894 | 5_1:+56432988 | Msa0738660:CDS |
| TCTCCATTTGAATCGGTGAG+GGG | 0.645190 | 5_1:-56435428 | None:intergenic |
| GTTGGTGTTGCAAGATCAAG+GGG | 0.649121 | 5_1:-56435230 | None:intergenic |
| TAGTGATTGTCAAAGGACGT+TGG | 0.680187 | 5_1:-56435248 | None:intergenic |
| CATGGCGGTGACGAAATCAG+AGG | 0.705431 | 5_1:-56435384 | None:intergenic |
| GTCTCCCATCTTGATCATGG+CGG | 0.710146 | 5_1:-56435399 | None:intergenic |
| GTAGAAGAGAAGCACCCATG+CGG | 0.717536 | 5_1:-56433002 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAAAAAAAGTTAAAAGT+AGG | - | chr5_1:56433319-56433338 | None:intergenic | 10.0% |
| !! | AGATTATCTAGTTAATTATA+TGG | + | chr5_1:56432807-56432826 | Msa0738660:exon | 15.0% |
| !!! | TATTTAACAATATTGACTTA+TGG | + | chr5_1:56433364-56433383 | Msa0738660:intron | 15.0% |
| !! | TAAAAAATTAATGTGATCAT+AGG | + | chr5_1:56433468-56433487 | Msa0738660:intron | 15.0% |
| !!! | TTTATTCTCTAAAATGTATA+GGG | - | chr5_1:56433940-56433959 | None:intergenic | 15.0% |
| !!! | AAATAAGTGATTTAATTTGA+CGG | - | chr5_1:56434757-56434776 | None:intergenic | 15.0% |
| !!! | TTAAATCACTTATTTTAAGA+CGG | + | chr5_1:56434762-56434781 | Msa0738660:intron | 15.0% |
| !!! | GATTTTTTTTAAATGATACT+TGG | + | chr5_1:56435062-56435081 | Msa0738660:intron | 15.0% |
| !!! | TAACCAATTTAATTTTTTGT+TGG | + | chr5_1:56435479-56435498 | Msa0738660:exon | 15.0% |
| !!! | TTTTTATTTACATTTAAGTC+TGG | + | chr5_1:56435518-56435537 | Msa0738660:three_prime_UTR | 15.0% |
| !!! | TTTCTTGTATTTTATTTTGT+TGG | + | chr5_1:56435569-56435588 | Msa0738660:three_prime_UTR | 15.0% |
| !!! | ATATATTAAGGTTTGTTTTA+AGG | + | chr5_1:56435669-56435688 | Msa0738660:three_prime_UTR | 15.0% |
| !!! | TATATTAAGGTTTGTTTTAA+GGG | + | chr5_1:56435670-56435689 | Msa0738660:three_prime_UTR | 15.0% |
| !! | AATTGATACAAGAACTAAAA+GGG | - | chr5_1:56432878-56432897 | None:intergenic | 20.0% |
| !!! | TTTTAGTTCTTGTATCAATT+GGG | + | chr5_1:56432878-56432897 | Msa0738660:CDS | 20.0% |
| !! | ATGTAATTGAATGTAAGTAA+GGG | - | chr5_1:56433075-56433094 | None:intergenic | 20.0% |
| !! | AATGTAATTGAATGTAAGTA+AGG | - | chr5_1:56433076-56433095 | None:intergenic | 20.0% |
| !! | CTTATTTATAAGACACATTT+GGG | - | chr5_1:56433243-56433262 | None:intergenic | 20.0% |
| !!! | TCTTATTTATAAGACACATT+TGG | - | chr5_1:56433244-56433263 | None:intergenic | 20.0% |
| !!! | ATAGAATGATTTTTCACTAA+CGG | + | chr5_1:56433284-56433303 | Msa0738660:intron | 20.0% |
| !! | TTGAATAAATAAACCATTGT+AGG | + | chr5_1:56433648-56433667 | Msa0738660:intron | 20.0% |
| !! | TGAATAAATAAACCATTGTA+GGG | + | chr5_1:56433649-56433668 | Msa0738660:intron | 20.0% |
| !!! | TGATTATTATGATGCATTTT+TGG | - | chr5_1:56433876-56433895 | None:intergenic | 20.0% |
| !!! | CTTTATTCTCTAAAATGTAT+AGG | - | chr5_1:56433941-56433960 | None:intergenic | 20.0% |
| !! | AATCAATAGAATGTATTTGT+CGG | - | chr5_1:56434275-56434294 | None:intergenic | 20.0% |
| !! | TAAGTCAATTTGTCAATAAT+TGG | + | chr5_1:56434294-56434313 | Msa0738660:intron | 20.0% |
| !!! | AGCTAAATTTGCTTATATTT+AGG | - | chr5_1:56434361-56434380 | None:intergenic | 20.0% |
| !!! | ATAAGCAAATTTAGCTTTTT+AGG | + | chr5_1:56434365-56434384 | Msa0738660:intron | 20.0% |
| !!! | AATTTGCTTATATTTAAGAC+CGG | + | chr5_1:56434463-56434482 | Msa0738660:intron | 20.0% |
| !! | GAAAAAATAATTCCTATTGT+AGG | - | chr5_1:56434851-56434870 | None:intergenic | 20.0% |
| !!! | TTAGTTTTTCATTGATTGAT+CGG | + | chr5_1:56434973-56434992 | Msa0738660:intron | 20.0% |
| !! | AATAAAAAGATACATGCATT+TGG | - | chr5_1:56435506-56435525 | None:intergenic | 20.0% |
| ! | CAATTGATACAAGAACTAAA+AGG | - | chr5_1:56432879-56432898 | None:intergenic | 25.0% |
| !!! | CTTTTAGTTCTTGTATCAAT+TGG | + | chr5_1:56432877-56432896 | Msa0738660:CDS | 25.0% |
| ! | TCTCTTATAAATAAGATCGA+AGG | - | chr5_1:56433153-56433172 | None:intergenic | 25.0% |
| ! | AATTAATGTGATCATAGGAT+TGG | + | chr5_1:56433473-56433492 | Msa0738660:intron | 25.0% |
| !!! | TTATTATGATGCATTTTTGG+TGG | - | chr5_1:56433873-56433892 | None:intergenic | 25.0% |
| !! | AATTTGCTTATATTTAGGAC+CGG | - | chr5_1:56434356-56434375 | None:intergenic | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | - | chr5_1:56434429-56434448 | None:intergenic | 25.0% |
| ! | TTAATAATAATTTCCACCCA+TGG | - | chr5_1:56434527-56434546 | None:intergenic | 25.0% |
| ! | GAAATTATTATTAACATGCG+TGG | + | chr5_1:56434533-56434552 | Msa0738660:intron | 25.0% |
| ! | TTTAAAGAATGTCCTACAAT+AGG | + | chr5_1:56434836-56434855 | Msa0738660:intron | 25.0% |
| ! | TAAAAATAATTCCGCTGAAA+TGG | - | chr5_1:56434945-56434964 | None:intergenic | 25.0% |
| !!! | TAGTTTTTCATTGATTGATC+GGG | + | chr5_1:56434974-56434993 | Msa0738660:intron | 25.0% |
| !! | TTTTAAATGATACTTGGACT+AGG | + | chr5_1:56435068-56435087 | Msa0738660:intron | 25.0% |
| ! | GGTCCAACAAAAAATTAAAT+TGG | - | chr5_1:56435485-56435504 | None:intergenic | 25.0% |
| ! | TATTTACATTTAAGTCTGGA+TGG | + | chr5_1:56435522-56435541 | Msa0738660:three_prime_UTR | 25.0% |
| !! | TCTCTGAAGTACAATTAAGA+AGG | - | chr5_1:56432790-56432809 | None:intergenic | 30.0% |
| ATCTTTCGAAAGATTAGCAT+TGG | - | chr5_1:56432908-56432927 | None:intergenic | 30.0% | |
| ! | TTCACAGTGTCAAATAGTTT+TGG | - | chr5_1:56432949-56432968 | None:intergenic | 30.0% |
| AATTGAATGTAAGTAAGGGA+GGG | - | chr5_1:56433071-56433090 | None:intergenic | 30.0% | |
| TAATTGAATGTAAGTAAGGG+AGG | - | chr5_1:56433072-56433091 | None:intergenic | 30.0% | |
| TAAACAAAAGTCGATGTATG+TGG | + | chr5_1:56433181-56433200 | Msa0738660:intron | 30.0% | |
| ! | ATGATTTTTCACTAACGGTT+TGG | + | chr5_1:56433289-56433308 | Msa0738660:intron | 30.0% |
| ! | TATGCCATGCTAGTTTAATT+AGG | + | chr5_1:56433406-56433425 | Msa0738660:intron | 30.0% |
| TCATCCTAATTAAACTAGCA+TGG | - | chr5_1:56433413-56433432 | None:intergenic | 30.0% | |
| AAAAGCAAGTAACATCAAAG+AGG | - | chr5_1:56433445-56433464 | None:intergenic | 30.0% | |
| CTATGAACTATACGATTCAT+TGG | + | chr5_1:56433615-56433634 | Msa0738660:intron | 30.0% | |
| TTTACACTGATCGTTCAATT+AGG | - | chr5_1:56433986-56434005 | None:intergenic | 30.0% | |
| CATTCAACTAATGATGTATG+TGG | + | chr5_1:56434390-56434409 | Msa0738660:intron | 30.0% | |
| GATGTATGTGGTTCATATTA+TGG | + | chr5_1:56434402-56434421 | Msa0738660:intron | 30.0% | |
| AAACAATGAAACATAAAGGG+TGG | - | chr5_1:56435030-56435049 | None:intergenic | 30.0% | |
| ACCCTTTATGTTTCATTGTT+TGG | + | chr5_1:56435029-56435048 | Msa0738660:intron | 30.0% | |
| CCCAAACAATGAAACATAAA+GGG | - | chr5_1:56435033-56435052 | None:intergenic | 30.0% | |
| CCCTTTATGTTTCATTGTTT+GGG | + | chr5_1:56435030-56435049 | Msa0738660:intron | 30.0% | |
| CCTTTATGTTTCATTGTTTG+GGG | + | chr5_1:56435031-56435050 | Msa0738660:intron | 30.0% | |
| CTTGAAATAGTGATTGTCAA+AGG | - | chr5_1:56435258-56435277 | None:intergenic | 30.0% | |
| TCTTATCTCTCCATTTGAAT+CGG | - | chr5_1:56435438-56435457 | None:intergenic | 30.0% | |
| ATTCTAAGTGTGAATGTTGA+AGG | + | chr5_1:56435634-56435653 | Msa0738660:three_prime_UTR | 30.0% | |
| AGTTCAATCTGCCATATCAA+AGG | + | chr5_1:56432975-56432994 | Msa0738660:CDS | 35.0% | |
| GTACATTAACAAAGCAATCG+TGG | - | chr5_1:56433038-56433057 | None:intergenic | 35.0% | |
| ATTGAATGTAAGTAAGGGAG+GGG | - | chr5_1:56433070-56433089 | None:intergenic | 35.0% | |
| TGACTTATGGTTTCTTTGTC+TGG | + | chr5_1:56433377-56433396 | Msa0738660:intron | 35.0% | |
| TATGCTTAAATTTCCCAGCT+TGG | + | chr5_1:56434067-56434086 | Msa0738660:intron | 35.0% | |
| AGTAAATCAGCTGCAAACAA+TGG | + | chr5_1:56434139-56434158 | Msa0738660:intron | 35.0% | |
| CATTAAACCTTGAGATGAGT+TGG | - | chr5_1:56434192-56434211 | None:intergenic | 35.0% | |
| ATCTCAAGGTTTAATGCTCT+TGG | + | chr5_1:56434196-56434215 | Msa0738660:intron | 35.0% | |
| ATAGATTGATATACTCCCTC+CGG | + | chr5_1:56434334-56434353 | Msa0738660:intron | 35.0% | |
| ! | CGCATATTTTATACTCTCTC+CGG | - | chr5_1:56434485-56434504 | None:intergenic | 35.0% |
| AGAGAAATTGATAGATGCCA+TGG | + | chr5_1:56434507-56434526 | Msa0738660:intron | 35.0% | |
| GAGAAATTGATAGATGCCAT+GGG | + | chr5_1:56434508-56434527 | Msa0738660:intron | 35.0% | |
| !!! | AATCGTCGCTTATTTTGAGA+CGG | - | chr5_1:56434577-56434596 | None:intergenic | 35.0% |
| AAAACTGACTACCATTTCAG+CGG | + | chr5_1:56434931-56434950 | Msa0738660:intron | 35.0% | |
| CCCCAAACAATGAAACATAA+AGG | - | chr5_1:56435034-56435053 | None:intergenic | 35.0% | |
| ! | TAAATGATACTTGGACTAGG+TGG | + | chr5_1:56435071-56435090 | Msa0738660:intron | 35.0% |
| !! | AGCAAAGGAAGTATCTATGT+TGG | - | chr5_1:56435153-56435172 | None:intergenic | 35.0% |
| !! | AGGTTCTGGGGATAATAATT+TGG | + | chr5_1:56435205-56435224 | Msa0738660:CDS | 35.0% |
| AAGAACCTAGTTGACAGTAA+GGG | + | chr5_1:56435275-56435294 | Msa0738660:CDS | 35.0% | |
| GATTCCATAGTGCATGAATA+TGG | + | chr5_1:56435341-56435360 | Msa0738660:CDS | 35.0% | |
| AAATCAGAGGAAAAAGAGCT+TGG | - | chr5_1:56435374-56435393 | None:intergenic | 35.0% | |
| GAGAGATAAGAAAGAATTGC+AGG | + | chr5_1:56435447-56435466 | Msa0738660:CDS | 35.0% | |
| AAACCATTGTAGGGATGTGA+TGG | + | chr5_1:56433658-56433677 | Msa0738660:intron | 40.0% | |
| TGCCAATCCCAACAGAAATT+CGG | + | chr5_1:56433726-56433745 | Msa0738660:CDS | 40.0% | |
| CAAGTTTCACATCCCATGTT+GGG | - | chr5_1:56434096-56434115 | None:intergenic | 40.0% | |
| ! | TGCTTATATTTAGGACCGGA+GGG | - | chr5_1:56434352-56434371 | None:intergenic | 40.0% |
| ! | TTGCTTATATTTAGGACCGG+AGG | - | chr5_1:56434353-56434372 | None:intergenic | 40.0% |
| AAATTGATAGATGCCATGGG+TGG | + | chr5_1:56434511-56434530 | Msa0738660:intron | 40.0% | |
| TGTTGGAGTCGTTGTAAATG+TGG | - | chr5_1:56435136-56435155 | None:intergenic | 40.0% | |
| TAGTGATTGTCAAAGGACGT+TGG | - | chr5_1:56435251-56435270 | None:intergenic | 40.0% | |
| CAAGAACCTAGTTGACAGTA+AGG | + | chr5_1:56435274-56435293 | Msa0738660:CDS | 40.0% | |
| ACCATTGAAGAGTTGTTGGT+CGG | - | chr5_1:56435312-56435331 | None:intergenic | 40.0% | |
| ATCCACCATTGAAGAGTTGT+TGG | - | chr5_1:56435316-56435335 | None:intergenic | 40.0% | |
| TTCATGCACTATGGAATCAG+TGG | - | chr5_1:56435339-56435358 | None:intergenic | 40.0% | |
| CAAGCCATATTCATGCACTA+TGG | - | chr5_1:56435348-56435367 | None:intergenic | 40.0% | |
| AATGTCTCCCATCTTGATCA+TGG | - | chr5_1:56435405-56435424 | None:intergenic | 40.0% | |
| ATATCAAAGGAGACCCGCAT+GGG | + | chr5_1:56432988-56433007 | Msa0738660:CDS | 45.0% | |
| GAACCATCACATCCCTACAA+TGG | - | chr5_1:56433664-56433683 | None:intergenic | 45.0% | |
| GATGACACATCAAGCTTCAC+CGG | + | chr5_1:56433694-56433713 | Msa0738660:CDS | 45.0% | |
| TGTCGATCACTTCGAATCCA+CGG | - | chr5_1:56433753-56433772 | None:intergenic | 45.0% | |
| CGACAAAATCAAGTCAGCAG+TGG | + | chr5_1:56433768-56433787 | Msa0738660:CDS | 45.0% | |
| AACAGAGTCTCTAGCAGTGA+TGG | - | chr5_1:56433836-56433855 | None:intergenic | 45.0% | |
| GCTTAAATTTCCCAGCTTGG+AGG | + | chr5_1:56434070-56434089 | Msa0738660:intron | 45.0% | |
| CCAAGTTTCACATCCCATGT+TGG | - | chr5_1:56434097-56434116 | None:intergenic | 45.0% | |
| CCAACATGGGATGTGAAACT+TGG | + | chr5_1:56434094-56434113 | Msa0738660:CDS | 45.0% | |
| AGTTGGTTGAGGCTTGAAGT+GGG | - | chr5_1:56434175-56434194 | None:intergenic | 45.0% | |
| !! | ACCTTGAGATGAGTTGGTTG+AGG | - | chr5_1:56434186-56434205 | None:intergenic | 45.0% |
| TGGACTTTCCACCAAGGATT+TGG | + | chr5_1:56434216-56434235 | Msa0738660:intron | 45.0% | |
| AGACAATGCGACCAAATCCT+TGG | - | chr5_1:56434230-56434249 | None:intergenic | 45.0% | |
| ! | AAGGATTTGGTCGCATTGTC+TGG | + | chr5_1:56434229-56434248 | Msa0738660:intron | 45.0% |
| GTCACACAATTGGACAAGCA+AGG | + | chr5_1:56435093-56435112 | Msa0738660:CDS | 45.0% | |
| ATACTTCCTTTGCTCGCACA+AGG | + | chr5_1:56435159-56435178 | Msa0738660:CDS | 45.0% | |
| !! | GTTGGTGTTGCAAGATCAAG+GGG | - | chr5_1:56435233-56435252 | None:intergenic | 45.0% |
| !! | CGTTGGTGTTGCAAGATCAA+GGG | - | chr5_1:56435234-56435253 | None:intergenic | 45.0% |
| !! | ACGTTGGTGTTGCAAGATCA+AGG | - | chr5_1:56435235-56435254 | None:intergenic | 45.0% |
| GTAGTCCCTTACTGTCAACT+AGG | - | chr5_1:56435283-56435302 | None:intergenic | 45.0% | |
| TCCGACCAACAACTCTTCAA+TGG | + | chr5_1:56435308-56435327 | Msa0738660:CDS | 45.0% | |
| GACCAACAACTCTTCAATGG+TGG | + | chr5_1:56435311-56435330 | Msa0738660:CDS | 45.0% | |
| TCTCCATTTGAATCGGTGAG+GGG | - | chr5_1:56435431-56435450 | None:intergenic | 45.0% | |
| CTCTCCATTTGAATCGGTGA+GGG | - | chr5_1:56435432-56435451 | None:intergenic | 45.0% | |
| TCTCTCCATTTGAATCGGTG+AGG | - | chr5_1:56435433-56435452 | None:intergenic | 45.0% | |
| !! | TAAATAATAAAAGAAAAATA+TGG | + | chr5_1:56434708-56434727 | Msa0738660:intron | 5.0% |
| !! | AAAAAAAACTTTATATATTA+AGG | + | chr5_1:56435657-56435676 | Msa0738660:three_prime_UTR | 5.0% |
| CATGCGGGTCTCCTTTGATA+TGG | - | chr5_1:56432989-56433008 | None:intergenic | 50.0% | |
| CATATCAAAGGAGACCCGCA+TGG | + | chr5_1:56432987-56433006 | Msa0738660:CDS | 50.0% | |
| !! | TAGAAGAGAAGCACCCATGC+GGG | - | chr5_1:56433004-56433023 | None:intergenic | 50.0% |
| !! | GTAGAAGAGAAGCACCCATG+CGG | - | chr5_1:56433005-56433024 | None:intergenic | 50.0% |
| !! | GGGATTGGCAGTTTTCTCTC+CGG | - | chr5_1:56433716-56433735 | None:intergenic | 50.0% |
| GGCCGAATTTCTGTTGGGAT+TGG | - | chr5_1:56433731-56433750 | None:intergenic | 50.0% | |
| GTCGATCACTTCGAATCCAC+GGG | - | chr5_1:56433752-56433771 | None:intergenic | 50.0% | |
| ! | GCAGTGGAGAAAGTATGTCC+AGG | + | chr5_1:56433784-56433803 | Msa0738660:CDS | 50.0% |
| ! | AGTCTCTAGCAGTGATGGTG+AGG | - | chr5_1:56433831-56433850 | None:intergenic | 50.0% |
| ! | GAGTTGGTTGAGGCTTGAAG+TGG | - | chr5_1:56434176-56434195 | None:intergenic | 50.0% |
| GCCTCAACCAACTCATCTCA+AGG | + | chr5_1:56434182-56434201 | Msa0738660:intron | 50.0% | |
| TGCTCTTGGACTTTCCACCA+AGG | + | chr5_1:56434210-56434229 | Msa0738660:intron | 50.0% | |
| CAATGCGACCAAATCCTTGG+TGG | - | chr5_1:56434227-56434246 | None:intergenic | 50.0% | |
| GGACTAGGTGGTCACACAAT+TGG | + | chr5_1:56435083-56435102 | Msa0738660:intron | 50.0% | |
| TGATTGCCTTGTGCGAGCAA+AGG | - | chr5_1:56435168-56435187 | None:intergenic | 50.0% | |
| TTTGCTCGCACAAGGCAATC+AGG | + | chr5_1:56435167-56435186 | Msa0738660:CDS | 50.0% | |
| TTGCTCGCACAAGGCAATCA+GGG | + | chr5_1:56435168-56435187 | Msa0738660:CDS | 50.0% | |
| TCCCCAGAACCTGATGTCTT+GGG | - | chr5_1:56435197-56435216 | None:intergenic | 50.0% | |
| ATCCCCAGAACCTGATGTCT+TGG | - | chr5_1:56435198-56435217 | None:intergenic | 50.0% | |
| TGAAGAGTTGTTGGTCGGAG+TGG | - | chr5_1:56435307-56435326 | None:intergenic | 50.0% | |
| GTCACCGCCATGATCAAGAT+GGG | + | chr5_1:56435395-56435414 | Msa0738660:CDS | 50.0% | |
| GTCTCCCATCTTGATCATGG+CGG | - | chr5_1:56435402-56435421 | None:intergenic | 50.0% | |
| !! | AGTCCCCTCACCGATTCAAA+TGG | + | chr5_1:56435425-56435444 | Msa0738660:CDS | 50.0% |
| CCACGGGCCGAATTTCTGTT+GGG | - | chr5_1:56433736-56433755 | None:intergenic | 55.0% | |
| TCCACGGGCCGAATTTCTGT+TGG | - | chr5_1:56433737-56433756 | None:intergenic | 55.0% | |
| TCAGCGCATGAAACTGCACC+TGG | - | chr5_1:56433805-56433824 | None:intergenic | 55.0% | |
| TGAGGCTTGAAGTGGGTGCT+GGG | - | chr5_1:56434168-56434187 | None:intergenic | 55.0% | |
| TTGAGGCTTGAAGTGGGTGC+TGG | - | chr5_1:56434169-56434188 | None:intergenic | 55.0% | |
| TGCCCCAAGACATCAGGTTC+TGG | + | chr5_1:56435191-56435210 | Msa0738660:CDS | 55.0% | |
| GCCCCAAGACATCAGGTTCT+GGG | + | chr5_1:56435192-56435211 | Msa0738660:CDS | 55.0% | |
| CCCCAGAACCTGATGTCTTG+GGG | - | chr5_1:56435196-56435215 | None:intergenic | 55.0% | |
| CCCCAAGACATCAGGTTCTG+GGG | + | chr5_1:56435193-56435212 | Msa0738660:CDS | 55.0% | |
| CATGGCGGTGACGAAATCAG+AGG | - | chr5_1:56435387-56435406 | None:intergenic | 55.0% | |
| CGTCACCGCCATGATCAAGA+TGG | + | chr5_1:56435394-56435413 | Msa0738660:CDS | 55.0% | |
| CCCAACAGAAATTCGGCCCG+TGG | + | chr5_1:56433733-56433752 | Msa0738660:CDS | 60.0% | |
| CCATGTTGGGCCTCCAAGCT+GGG | - | chr5_1:56434083-56434102 | None:intergenic | 60.0% | |
| CCAGCTTGGAGGCCCAACAT+GGG | + | chr5_1:56434081-56434100 | Msa0738660:intron | 60.0% | |
| ! | TCAGGGTGCCCCAAGACATC+AGG | + | chr5_1:56435185-56435204 | Msa0738660:CDS | 60.0% |
| CCCAGCTTGGAGGCCCAACA+TGG | + | chr5_1:56434080-56434099 | Msa0738660:intron | 65.0% | |
| CCCATGTTGGGCCTCCAAGC+TGG | - | chr5_1:56434084-56434103 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 56432777 | 56435730 | 56432777 | ID=Msa0738660;Name=Msa0738660 |
| chr5_1 | mRNA | 56432777 | 56435730 | 56432777 | ID=Msa0738660-mRNA-1;Parent=Msa0738660;Name=Msa0738660-mRNA-1;_AED=0.10;_eAED=0.10;_QI=49|0.66|0.75|1|0.66|0.75|4|249|288 |
| chr5_1 | exon | 56432777 | 56433053 | 56432777 | ID=Msa0738660-mRNA-1:exon:15989;Parent=Msa0738660-mRNA-1 |
| chr5_1 | exon | 56433670 | 56433861 | 56433670 | ID=Msa0738660-mRNA-1:exon:15990;Parent=Msa0738660-mRNA-1 |
| chr5_1 | exon | 56434085 | 56434139 | 56434085 | ID=Msa0738660-mRNA-1:exon:15991;Parent=Msa0738660-mRNA-1 |
| chr5_1 | exon | 56435090 | 56435730 | 56435090 | ID=Msa0738660-mRNA-1:exon:15992;Parent=Msa0738660-mRNA-1 |
| chr5_1 | five_prime_UTR | 56432777 | 56432825 | 56432777 | ID=Msa0738660-mRNA-1:five_prime_utr;Parent=Msa0738660-mRNA-1 |
| chr5_1 | CDS | 56432826 | 56433053 | 56432826 | ID=Msa0738660-mRNA-1:cds;Parent=Msa0738660-mRNA-1 |
| chr5_1 | CDS | 56433670 | 56433861 | 56433670 | ID=Msa0738660-mRNA-1:cds;Parent=Msa0738660-mRNA-1 |
| chr5_1 | CDS | 56434085 | 56434139 | 56434085 | ID=Msa0738660-mRNA-1:cds;Parent=Msa0738660-mRNA-1 |
| chr5_1 | CDS | 56435090 | 56435481 | 56435090 | ID=Msa0738660-mRNA-1:cds;Parent=Msa0738660-mRNA-1 |
| chr5_1 | three_prime_UTR | 56435482 | 56435730 | 56435482 | ID=Msa0738660-mRNA-1:three_prime_utr;Parent=Msa0738660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
