AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1073050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1073050 MtrunA17_Chr7g0255941 99.323 591 4 0 1 591 1 591 0.0 1195
Msa1073050 MtrunA17_Chr6g0478431 66.248 637 136 13 1 591 1 604 0.0 798
Msa1073050 MtrunA17_Chr4g0044181 61.300 677 158 11 1 591 1 659 0.0 755
Msa1073050 MtrunA17_Chr1g0160461 63.396 642 163 16 1 591 1 621 0.0 720
Msa1073050 MtrunA17_Chr4g0071571 61.014 631 200 10 1 591 1 625 0.0 714
Msa1073050 MtrunA17_Chr8g0393111 60.134 597 122 15 1 561 1 517 0.0 639
Msa1073050 MtrunA17_Chr1g0159341 51.419 599 211 15 1 591 1 527 7.42e-179 516
Msa1073050 MtrunA17_Chr2g0298971 37.294 606 255 15 1 570 1 517 3.18e-119 363
Msa1073050 MtrunA17_Chr4g0071551 74.648 213 53 1 1 212 1 213 1.78e-114 340
Msa1073050 MtrunA17_Chr4g0071561 44.444 369 121 8 230 567 1 316 2.71e-80 255
Msa1073050 MtrunA17_Chr6g0452821 55.729 192 76 3 403 591 175 360 3.64e-61 206
Msa1073050 MtrunA17_Chr6g0452821 59.494 158 63 1 1 157 1 158 7.51e-56 192
Msa1073050 MtrunA17_Chr7g0216571 62.658 158 59 0 434 591 210 367 4.14e-60 204
Msa1073050 MtrunA17_Chr7g0216571 57.595 158 67 0 1 158 12 169 1.28e-55 192
Msa1073050 MtrunA17_Chr7g0249141 49.438 178 85 1 412 589 187 359 2.85e-54 188
Msa1073050 MtrunA17_Chr7g0249141 46.193 197 94 2 1 194 1 188 1.22e-49 176
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1073050 AT1G73590.1 65.070 647 145 14 1 591 1 622 0.0 768
Msa1073050 AT1G23080.1 62.264 636 178 12 1 591 1 619 0.0 714
Msa1073050 AT1G23080.3 62.342 632 180 11 1 591 1 615 0.0 714
Msa1073050 AT1G23080.4 62.342 632 180 11 1 591 1 615 0.0 714
Msa1073050 AT1G70940.1 60.031 653 186 10 1 591 1 640 0.0 713
Msa1073050 AT2G01420.1 60.190 633 189 9 1 591 1 612 0.0 710
Msa1073050 AT2G01420.2 59.876 643 179 12 1 591 1 616 0.0 705
Msa1073050 AT5G57090.1 60.000 660 182 15 1 591 1 647 0.0 696
Msa1073050 AT1G23080.2 58.349 533 164 11 1 492 1 516 0.0 555
Msa1073050 AT2G01420.3 55.331 544 164 12 1 492 1 517 0.0 535
Msa1073050 AT5G57090.2 56.708 559 160 15 102 591 2 547 0.0 532
Msa1073050 AT1G77110.1 48.675 604 263 11 1 591 1 570 3.21e-179 519
Msa1073050 AT1G77110.2 48.110 582 255 11 1 569 1 548 2.42e-167 488
Msa1073050 AT5G15100.1 61.446 166 60 2 428 591 204 367 6.09e-59 201
Msa1073050 AT5G15100.1 51.515 165 75 2 1 160 1 165 1.25e-46 168
Msa1073050 AT5G16530.2 56.051 157 69 0 1 157 1 157 1.26e-54 188
Msa1073050 AT5G16530.2 49.635 137 69 0 434 570 192 328 1.06e-41 154
Msa1073050 AT5G16530.1 56.051 157 69 0 1 157 1 157 2.71e-54 188
Msa1073050 AT5G16530.1 50.980 153 75 0 434 586 192 344 1.49e-49 176

Find 153 sgRNAs with CRISPR-Local

Find 257 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCTAACAATGTAGAAATT+TGG 0.111534 7_2:+70390504 Msa1073050:three_prime_UTR
AATACTTATTCCAGCCTTAT+TGG 0.181814 7_2:+70389572 Msa1073050:CDS
ATGGGCATTCCTTTGTTAAA+AGG 0.199123 7_2:+70388268 Msa1073050:CDS
ACAATCTAACTTTGGAAGTT+TGG 0.214287 7_2:+70388750 Msa1073050:CDS
CAATGTAGAAATTTGGGATT+TGG 0.221288 7_2:+70390511 Msa1073050:three_prime_UTR
ACCTGTGGCTAATAAGAAAA+AGG 0.222920 7_2:+70388858 Msa1073050:CDS
TGATTCTGATGTTCTTTCTT+TGG 0.227098 7_2:+70388453 Msa1073050:CDS
TATGGAAATGATCAACTTAA+TGG 0.262381 7_2:+70388994 Msa1073050:CDS
TGTTTAGAATATGAAGAATT+TGG 0.267914 7_2:+70389338 Msa1073050:intron
ATCTAACAATGTAGAAATTT+GGG 0.268446 7_2:+70390505 Msa1073050:three_prime_UTR
TTTAGAGGTGGTGGTGATTA+TGG 0.269987 7_2:+70388976 Msa1073050:CDS
AATCAGCTTTGTGCTCCTTT+TGG 0.278332 7_2:-70390734 None:intergenic
TCACCTTGAGATCCAGCTTT+AGG 0.285606 7_2:-70389464 None:intergenic
ACTTCCTAACACACTTGTTA+TGG 0.291583 7_2:+70388249 Msa1073050:CDS
CTTGGTCTCTGGTCTCATTC+AGG 0.296136 7_2:+70389600 Msa1073050:CDS
AAGACTAATTTCAGTGGATT+AGG 0.314876 7_2:+70390435 Msa1073050:three_prime_UTR
TTTATTGCAGGGTTATATTT+GGG 0.320539 7_2:+70390326 Msa1073050:intron
TTGCCTATGGTTCAGTAAAA+TGG 0.320764 7_2:+70387990 Msa1073050:CDS
ATGGCGGTTCGCTTCCTTAC+CGG 0.322606 7_2:+70389949 Msa1073050:CDS
CAATCTAACTTTGGAAGTTT+GGG 0.322747 7_2:+70388751 Msa1073050:CDS
AGTGGTGTTGGTAAAGTTAA+TGG 0.322797 7_2:+70388787 Msa1073050:CDS
TGTGTTTGTAGGGTTGTTCA+TGG 0.325689 7_2:+70389876 Msa1073050:intron
CATGGTGGTGGTGCTGGTGA+TGG 0.331564 7_2:+70388883 Msa1073050:CDS
ATAAGGCTGGAATAAGTATT+AGG 0.334056 7_2:-70389569 None:intergenic
CTTCCTAACACACTTGTTAT+GGG 0.334368 7_2:+70388250 Msa1073050:CDS
AATGTAGAAATTTGGGATTT+GGG 0.339092 7_2:+70390512 Msa1073050:three_prime_UTR
ATTAGGAGGTGAAAGGGTTT+TGG 0.339562 7_2:-70387778 None:intergenic
AAGACCTTCATATGTTTGTT+TGG 0.346836 7_2:+70388911 Msa1073050:CDS
AATGGAGTAGCTCACCAAAA+AGG 0.349382 7_2:+70389012 Msa1073050:CDS
AGGGGTGCTAGGATTCTTAT+TGG 0.354814 7_2:+70388385 Msa1073050:CDS
CATCCTGACATTCTTAGCAC+TGG 0.357420 7_2:+70390194 Msa1073050:CDS
TGATGATTCTGGTACCCTTA+TGG 0.365955 7_2:+70388300 Msa1073050:CDS
GTTAATGGAAATGGTGGAAA+TGG 0.366985 7_2:+70388802 Msa1073050:CDS
ATAATAGAACCAGCAGTATC+AGG 0.369629 7_2:-70388418 None:intergenic
TATTGGTCTCACTTGGTCTC+TGG 0.371342 7_2:+70389589 Msa1073050:CDS
AAGACAGGGATATGGTAAAA+AGG 0.371696 7_2:-70387733 None:intergenic
GTGTCTATATAGGGCCTGTT+TGG 0.386641 7_2:-70387593 None:intergenic
ATTCTATCTGATGCTGGCCT+TGG 0.395173 7_2:+70389743 Msa1073050:CDS
TGGTGTGGAGAAAATTGATT+AGG 0.395528 7_2:+70389543 Msa1073050:CDS
GGTCATGATGAGTTTAGCTT+TGG 0.397565 7_2:+70389359 Msa1073050:CDS
GAACAACTATTTGAACCATA+AGG 0.399773 7_2:-70388315 None:intergenic
TTGTTCTTCAATGTATCATT+TGG 0.400322 7_2:+70388332 Msa1073050:CDS
GATGGAAGAAGACAGGGATA+TGG 0.400541 7_2:-70387741 None:intergenic
CTTCATTTGTTGTAGGACTC+AGG 0.401999 7_2:+70389992 Msa1073050:CDS
CCTTACCGGCCCTGCTGTCA+TGG 0.408993 7_2:+70389963 Msa1073050:CDS
CCAGCCTTATTGGTCTCACT+TGG 0.410761 7_2:+70389582 Msa1073050:CDS
CTAGCAGGTGGCATGTTTGT+TGG 0.412896 7_2:-70389494 None:intergenic
ATGTAATAAACTAATGTGAT+AGG 0.418990 7_2:-70390364 None:intergenic
AGAGGCATTAGGAGGTGAAA+GGG 0.419993 7_2:-70387784 None:intergenic
TGGATTCCACCTTCAGAAAC+AGG 0.420011 7_2:-70388949 None:intergenic
ACCAAATGAAAAGGAGTGTT+AGG 0.421071 7_2:-70388168 None:intergenic
GATTGTTGGTTGAGATGAAA+TGG 0.423710 7_2:-70388090 None:intergenic
CACAAAAGGGACTATTCCTT+GGG 0.427167 7_2:-70390150 None:intergenic
CCTTTGTTAAAAGGAATGTA+TGG 0.427200 7_2:+70388277 Msa1073050:CDS
ATGCCCATAACAAGTGTGTT+AGG 0.427285 7_2:-70388253 None:intergenic
TACCCTGCTCCTCATAGTGC+AGG 0.428172 7_2:+70388826 Msa1073050:CDS
TGCTATGAACCTGTAGTTCA+TGG 0.428807 7_2:-70388119 None:intergenic
ACACAAAAGGGACTATTCCT+TGG 0.429505 7_2:-70390151 None:intergenic
GTTCATGGTGTAAGGATTGT+TGG 0.430026 7_2:-70388104 None:intergenic
TATTCCTTGGCAAACACAAA+AGG 0.430791 7_2:-70390164 None:intergenic
TTCACACCAGATCAATGTTC+AGG 0.436198 7_2:+70388022 Msa1073050:CDS
TCTGATGTTCTTTCTTTGGA+TGG 0.440284 7_2:+70388457 Msa1073050:CDS
GGAAATAGAACTGTTGCTAA+TGG 0.443765 7_2:+70389380 Msa1073050:CDS
TTCATTTGTTGTAGGACTCA+GGG 0.446337 7_2:+70389993 Msa1073050:CDS
AAGGGCCATGGTGGTGGTGC+TGG 0.446753 7_2:+70388877 Msa1073050:CDS
GGAATGTATGGTGATGATTC+TGG 0.447363 7_2:+70388289 Msa1073050:CDS
CCATGACAGCAGGGCCGGTA+AGG 0.448405 7_2:-70389963 None:intergenic
TTAGAAAATCAACTAGTTCA+AGG 0.451046 7_2:+70388539 Msa1073050:CDS
ATCCCTGCACTATGAGGAGC+AGG 0.452213 7_2:-70388829 None:intergenic
TTAGTCAAATTAGAAGGTCT+TGG 0.455629 7_2:-70388616 None:intergenic
AACTAGACCCTCTTGGTGTA+GGG 0.459669 7_2:-70388672 None:intergenic
GGGGTGTGTTGAAGGTTAAG+GGG 0.467461 7_2:-70387866 None:intergenic
ATAGCTAGTTAGGTACTAGA+AGG 0.469968 7_2:+70390556 Msa1073050:three_prime_UTR
AACCCAGTGCTAAGAATGTC+AGG 0.470683 7_2:-70390197 None:intergenic
AGGATGAACATTGTATTCCT+TGG 0.470964 7_2:-70390177 None:intergenic
GAGACCAAGTGAGACCAATA+AGG 0.471591 7_2:-70389586 None:intergenic
TCAGCATTAGTCAAATTAGA+AGG 0.474445 7_2:-70388622 None:intergenic
AAGAGGCATTAGGAGGTGAA+AGG 0.474814 7_2:-70387785 None:intergenic
GGTGGAATCCATGTCTTTAG+AGG 0.474947 7_2:+70388961 Msa1073050:CDS
GGTGGTGGTGCTGGTGATGG+TGG 0.475013 7_2:+70388886 Msa1073050:CDS
CCAAGCAAAATATGCAAAAG+TGG 0.478541 7_2:-70390632 None:intergenic
GTTGCACATTGCCATTGTAC+AGG 0.482101 7_2:+70390023 Msa1073050:CDS
TGTTCATGGCATTGCAGCCA+AGG 0.483477 7_2:+70389890 Msa1073050:CDS
TCTCAGAAGCCAAACCAAAC+AGG 0.484310 7_2:+70387579 None:intergenic
AACCTGTAGTTCATGGTGTA+AGG 0.485438 7_2:-70388112 None:intergenic
AGTTGAGCTTGAACCAAGCT+TGG 0.485871 7_2:-70389429 None:intergenic
ATAGACTTGGCAACAATAGC+AGG 0.487288 7_2:-70389716 None:intergenic
AACTCCAAACAAACATATGA+AGG 0.487742 7_2:-70388915 None:intergenic
AAACTAGACCCTCTTGGTGT+AGG 0.488328 7_2:-70388673 None:intergenic
GTTGGTAAAGTTAATGGAAA+TGG 0.489863 7_2:+70388793 Msa1073050:CDS
AGTCCTAGACAATCTAACTT+TGG 0.491310 7_2:+70388742 Msa1073050:CDS
GGGTGTGTTGAAGGTTAAGG+GGG 0.492098 7_2:-70387865 None:intergenic
TGTTTGAATATAGGGGTGCT+AGG 0.492266 7_2:+70388374 Msa1073050:CDS
GGAATGGCTATGTTTAGCCT+TGG 0.492947 7_2:+70389764 Msa1073050:CDS
TTTGACGAGGAAAGTGGTGT+TGG 0.498912 7_2:+70388775 Msa1073050:CDS
AACAACTATTTGAACCATAA+GGG 0.503075 7_2:-70388314 None:intergenic
AGTGCTTCACCTGTTTCTGA+AGG 0.503339 7_2:+70388940 Msa1073050:CDS
CTTCAAACTGAAGCTGAAGT+TGG 0.503605 7_2:+70388490 Msa1073050:CDS
ATCCTGACATTCTTAGCACT+GGG 0.504317 7_2:+70390195 Msa1073050:CDS
CACCGTTGCTTCTTTCGCGA+TGG 0.505940 7_2:+70389930 Msa1073050:CDS
GAACAGTTTCCTGATACTGC+TGG 0.507669 7_2:+70388409 Msa1073050:CDS
ATCTGATGCTGGCCTTGGAA+TGG 0.509478 7_2:+70389748 Msa1073050:CDS
GAAGCTGAAGTTGGTGAAGA+TGG 0.512229 7_2:+70388499 Msa1073050:CDS
TTGTTCTTGACCAAATGAAA+AGG 0.512300 7_2:-70388177 None:intergenic
ATCCTTACACCATGAACTAC+AGG 0.514520 7_2:+70388110 Msa1073050:CDS
TTTCCACAAGCAATAATCCT+TGG 0.514930 7_2:-70389907 None:intergenic
ATTCCTTGGCAAACACAAAA+GGG 0.516904 7_2:-70390163 None:intergenic
CTTCCAAAGTTAGATTGTCT+AGG 0.518838 7_2:-70388745 None:intergenic
ACTGAGCTTCATCCTAAAGC+TGG 0.521688 7_2:+70389452 Msa1073050:CDS
ATCCATGTCTTTAGAGGTGG+TGG 0.525159 7_2:+70388967 Msa1073050:CDS
GCTTCACCTGTTTCTGAAGG+TGG 0.525317 7_2:+70388943 Msa1073050:CDS
GTAGCAATGATCCTTGCCTA+TGG 0.532720 7_2:+70387977 Msa1073050:CDS
CATCCTAAAGCTGGATCTCA+AGG 0.533916 7_2:+70389461 Msa1073050:CDS
AGTCTTGTCATAACACTAGC+AGG 0.534534 7_2:-70389509 None:intergenic
ATAGCAATTCTATCTGATGC+TGG 0.537081 7_2:+70389737 Msa1073050:CDS
CAGCCAAGGATTATTGCTTG+TGG 0.537610 7_2:+70389904 Msa1073050:CDS
TTCTAGGCTGCTCTTCCCCA+AGG 0.538712 7_2:+70390134 Msa1073050:intron
TTTATGCCTGAACATTGATC+TGG 0.540677 7_2:-70388028 None:intergenic
ACTTCAGCTTCAGTTTGAAG+TGG 0.543240 7_2:-70388487 None:intergenic
CACCACCACCTCTAAAGACA+TGG 0.544001 7_2:-70388969 None:intergenic
AAAAGCCATGACAGCAGGGC+CGG 0.548021 7_2:-70389968 None:intergenic
CCAAGTGAGACCAATAAGGC+TGG 0.548167 7_2:-70389582 None:intergenic
GCTCAAGAGGGTCATTAGAA+TGG 0.548285 7_2:+70388200 Msa1073050:CDS
TGATTAAAACTAGACCCTCT+TGG 0.555019 7_2:-70388679 None:intergenic
AGGTCTCATGGTGTTAACTC+AGG 0.561967 7_2:+70388580 Msa1073050:CDS
GAACCAAGCTTGGATAGCAC+TGG 0.569514 7_2:-70389419 None:intergenic
ATTGGTTATAACCTGTACAA+TGG 0.572648 7_2:-70390034 None:intergenic
TGGTCAAGAACAAGCTCAAG+AGG 0.574049 7_2:+70388187 Msa1073050:CDS
GTACTACTGCAGTGAGGACA+TGG 0.576345 7_2:-70387946 None:intergenic
GGACCAGTGCTATCCAAGCT+TGG 0.577529 7_2:+70389416 Msa1073050:CDS
CGTTGCTTCTTTCGCGATGG+CGG 0.581055 7_2:+70389933 Msa1073050:CDS
GGTAAAGTTAATGGAAATGG+TGG 0.582094 7_2:+70388796 Msa1073050:CDS
ACCCTGCTCCTCATAGTGCA+GGG 0.588265 7_2:+70388827 Msa1073050:CDS
GGGGTGTGTTTAGGAAGTGA+GGG 0.591124 7_2:-70387846 None:intergenic
TCATTTGTTGTAGGACTCAG+GGG 0.591968 7_2:+70389994 Msa1073050:CDS
GGCTAAACATAGCCATTCCA+AGG 0.592408 7_2:-70389760 None:intergenic
CCTATGGTTCAGTAAAATGG+TGG 0.592418 7_2:+70387993 Msa1073050:CDS
AGAATGAAGACTAATTTCAG+TGG 0.594886 7_2:+70390429 Msa1073050:three_prime_UTR
CGCCATCGCGAAAGAAGCAA+CGG 0.606578 7_2:-70389932 None:intergenic
AGATAGAATTGCTATAGACT+TGG 0.609236 7_2:-70389729 None:intergenic
AGGATCATTGCTACATAGAG+TGG 0.621554 7_2:-70387968 None:intergenic
GCTAATGGTGTGGACAAAGA+AGG 0.627258 7_2:+70389395 Msa1073050:CDS
TAGAACTGTTGCTAATGGTG+TGG 0.630238 7_2:+70389385 Msa1073050:CDS
TCTAGAAACCCTACACCAAG+AGG 0.643094 7_2:+70388664 Msa1073050:CDS
CATCACCAGCACCACCACCA+TGG 0.643711 7_2:-70388882 None:intergenic
GGAATCCATGTCTTTAGAGG+TGG 0.645171 7_2:+70388964 Msa1073050:CDS
ATGAAATGGAATGAGAGTAG+TGG 0.649871 7_2:-70388076 None:intergenic
GGTCAAGAACAAGCTCAAGA+GGG 0.670875 7_2:+70388188 Msa1073050:CDS
CTAGAAACCCTACACCAAGA+GGG 0.673115 7_2:+70388665 Msa1073050:CDS
TCCCTGCACTATGAGGAGCA+GGG 0.723942 7_2:-70388828 None:intergenic
ACAAAAGGGACTATTCCTTG+GGG 0.727306 7_2:-70390149 None:intergenic
CTTGTCATAACACTAGCAGG+TGG 0.727524 7_2:-70389506 None:intergenic
AGAGTGGTACTACTGCAGTG+AGG 0.777701 7_2:-70387952 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAATAAAATATACCA+AGG - chr7_2:70389784-70389803 None:intergenic 10.0%
!!! TATTTTGTTTTAAATTTTCT+AGG + chr7_2:70390711-70390730 Msa1073050:three_prime_UTR 10.0%
!!! TTAATGTTTTTGGATTTTTT+TGG + chr7_2:70389077-70389096 Msa1073050:intron 15.0%
!!! TTTTACTCATGTTTTTTAAT+TGG + chr7_2:70389283-70389302 Msa1073050:intron 15.0%
!!! ATATTTTTTCCTTTTTTTGT+TGG + chr7_2:70389313-70389332 Msa1073050:intron 15.0%
!!! TTTTTAACATTAATGAATCT+AGG - chr7_2:70390277-70390296 None:intergenic 15.0%
!! AGATTCATTAATGTTAAAAA+AGG + chr7_2:70390277-70390296 Msa1073050:intron 15.0%
!!! ATTTATTCTATTTTATTGCA+GGG + chr7_2:70390315-70390334 Msa1073050:intron 15.0%
!!! ATTAGTTTATTACATTTTGT+TGG + chr7_2:70390372-70390391 Msa1073050:CDS 15.0%
!!! TTAGTTTATTACATTTTGTT+GGG + chr7_2:70390373-70390392 Msa1073050:CDS 15.0%
!!! TGTTGTTTTTGTTTGAATAT+AGG + chr7_2:70388365-70388384 Msa1073050:CDS 20.0%
!!! GTTGTTTTTGTTTGAATATA+GGG + chr7_2:70388366-70388385 Msa1073050:CDS 20.0%
!!! TTGTTTTTGTTTGAATATAG+GGG + chr7_2:70388367-70388386 Msa1073050:CDS 20.0%
!!! TCATACTGATTTTTATTCTA+TGG + chr7_2:70388699-70388718 Msa1073050:CDS 20.0%
!!! TTTTATTCTATGGTGAATAA+TGG + chr7_2:70388709-70388728 Msa1073050:CDS 20.0%
!!! TGTTTAGAATATGAAGAATT+TGG + chr7_2:70389338-70389357 Msa1073050:intron 20.0%
!! AATGTTATAAACATAACCAT+AGG - chr7_2:70389841-70389860 None:intergenic 20.0%
!! TGAAAAAAATAGTAAACTTC+TGG - chr7_2:70390068-70390087 None:intergenic 20.0%
!! ACATACATTCAATAAATCAA+TGG - chr7_2:70390101-70390120 None:intergenic 20.0%
!!! TTTAAAGTAGTAATCAATAG+AGG - chr7_2:70390235-70390254 None:intergenic 20.0%
!!! GATTTATTCTATTTTATTGC+AGG + chr7_2:70390314-70390333 Msa1073050:intron 20.0%
!! ATGTAATAAACTAATGTGAT+AGG - chr7_2:70390367-70390386 None:intergenic 20.0%
!! TATCTAACAATGTAGAAATT+TGG + chr7_2:70390504-70390523 Msa1073050:three_prime_UTR 20.0%
!! ATCTAACAATGTAGAAATTT+GGG + chr7_2:70390505-70390524 Msa1073050:three_prime_UTR 20.0%
!! TGGATTATTAATGAAAAAAG+AGG + chr7_2:70390652-70390671 Msa1073050:three_prime_UTR 20.0%
!!! TTCTTTTAGGTGTCTATATA+GGG - chr7_2:70387605-70387624 None:intergenic 25.0%
!!! TTTCTTTTAGGTGTCTATAT+AGG - chr7_2:70387606-70387625 None:intergenic 25.0%
!! TTTACAGCATCTTTTCTTTT+AGG - chr7_2:70387618-70387637 None:intergenic 25.0%
!!! TTCTTGAAGTTTTGAGTTAT+GGG - chr7_2:70387890-70387909 None:intergenic 25.0%
!!! TTTCTTGAAGTTTTGAGTTA+TGG - chr7_2:70387891-70387910 None:intergenic 25.0%
!!! AAAGCACTTATCATTTTGTT+TGG - chr7_2:70387917-70387936 None:intergenic 25.0%
! AACAACTATTTGAACCATAA+GGG - chr7_2:70388317-70388336 None:intergenic 25.0%
! TTGTTCTTCAATGTATCATT+TGG + chr7_2:70388332-70388351 Msa1073050:CDS 25.0%
! TTAGAAAATCAACTAGTTCA+AGG + chr7_2:70388539-70388558 Msa1073050:CDS 25.0%
! TATGGAAATGATCAACTTAA+TGG + chr7_2:70388994-70389013 Msa1073050:CDS 25.0%
!! GTCAAAAAACAAAACCTTTT+TGG - chr7_2:70389029-70389048 None:intergenic 25.0%
! ACATTAACCAAAAGTCAAAA+GGG - chr7_2:70389064-70389083 None:intergenic 25.0%
! AACATTAACCAAAAGTCAAA+AGG - chr7_2:70389065-70389084 None:intergenic 25.0%
!!! TGACTTTTGGTTAATGTTTT+TGG + chr7_2:70389067-70389086 Msa1073050:intron 25.0%
!!! GTTTTTGGATTTTTTTGGTT+TGG + chr7_2:70389082-70389101 Msa1073050:intron 25.0%
! GAGACAAAAAATAACTCATT+AGG - chr7_2:70389150-70389169 None:intergenic 25.0%
! AAACAACCAAATACTACTAA+TGG - chr7_2:70389243-70389262 None:intergenic 25.0%
! CTAAACAAACCAACAAAAAA+AGG - chr7_2:70389325-70389344 None:intergenic 25.0%
!!! AATCTTTCATATTGTTTTGC+AGG + chr7_2:70389678-70389697 Msa1073050:intron 25.0%
! CATCAAAATCAATAAGCTTA+TGG - chr7_2:70389815-70389834 None:intergenic 25.0%
!!! ATTGATTTTGATGTTTCCTA+TGG + chr7_2:70389822-70389841 Msa1073050:intron 25.0%
!!! AAACTTCTGGTTTTGTTTAT+TGG - chr7_2:70390055-70390074 None:intergenic 25.0%
!! TTTTATTGCAGGGTTATATT+TGG + chr7_2:70390325-70390344 Msa1073050:intron 25.0%
! TTTATTGCAGGGTTATATTT+GGG + chr7_2:70390326-70390345 Msa1073050:intron 25.0%
!!! TACTCCATTTAGTGTTTTTT+TGG + chr7_2:70390476-70390495 Msa1073050:three_prime_UTR 25.0%
!!! ACTCCATTTAGTGTTTTTTT+GGG + chr7_2:70390477-70390496 Msa1073050:three_prime_UTR 25.0%
!! AATGTAGAAATTTGGGATTT+GGG + chr7_2:70390512-70390531 Msa1073050:three_prime_UTR 25.0%
! AAGGAGAAAAAAAAAGAAGT+TGG + chr7_2:70390575-70390594 Msa1073050:three_prime_UTR 25.0%
!! TTTAAATTTTCTAGGCCAAA+AGG + chr7_2:70390719-70390738 Msa1073050:three_prime_UTR 25.0%
! AGAAAGCATGAAAAAAGAAG+AGG + chr7_2:70387662-70387681 Msa1073050:five_prime_UTR 30.0%
!!! TCTTGAAGTTTTGAGTTATG+GGG - chr7_2:70387889-70387908 None:intergenic 30.0%
TTGTTCTTGACCAAATGAAA+AGG - chr7_2:70388180-70388199 None:intergenic 30.0%
! CCATACATTCCTTTTAACAA+AGG - chr7_2:70388280-70388299 None:intergenic 30.0%
CCTTTGTTAAAAGGAATGTA+TGG + chr7_2:70388277-70388296 Msa1073050:CDS 30.0%
GAACAACTATTTGAACCATA+AGG - chr7_2:70388318-70388337 None:intergenic 30.0%
TGATTCTGATGTTCTTTCTT+TGG + chr7_2:70388453-70388472 Msa1073050:CDS 30.0%
!!! ATTTTTTCTAGAAGGTCTCA+TGG + chr7_2:70388568-70388587 Msa1073050:CDS 30.0%
TTAGTCAAATTAGAAGGTCT+TGG - chr7_2:70388619-70388638 None:intergenic 30.0%
TCAGCATTAGTCAAATTAGA+AGG - chr7_2:70388625-70388644 None:intergenic 30.0%
! ACAATCTAACTTTGGAAGTT+TGG + chr7_2:70388750-70388769 Msa1073050:CDS 30.0%
! CAATCTAACTTTGGAAGTTT+GGG + chr7_2:70388751-70388770 Msa1073050:CDS 30.0%
! GTTGGTAAAGTTAATGGAAA+TGG + chr7_2:70388793-70388812 Msa1073050:CDS 30.0%
AAGACCTTCATATGTTTGTT+TGG + chr7_2:70388911-70388930 Msa1073050:CDS 30.0%
AACTCCAAACAAACATATGA+AGG - chr7_2:70388918-70388937 None:intergenic 30.0%
CATTAACCAAAAGTCAAAAG+GGG - chr7_2:70389063-70389082 None:intergenic 30.0%
TTGTCTCTACTATTAGTACT+TGG + chr7_2:70389163-70389182 Msa1073050:intron 30.0%
ATCCATCCATTAGTAGTATT+TGG + chr7_2:70389234-70389253 Msa1073050:intron 30.0%
AACCAAATACTACTAATGGA+TGG - chr7_2:70389239-70389258 None:intergenic 30.0%
!!! GACAAGACTCATTTTGATTA+TGG + chr7_2:70389523-70389542 Msa1073050:CDS 30.0%
ATAAGGCTGGAATAAGTATT+AGG - chr7_2:70389572-70389591 None:intergenic 30.0%
! AATACTTATTCCAGCCTTAT+TGG + chr7_2:70389572-70389591 Msa1073050:CDS 30.0%
AGATAGAATTGCTATAGACT+TGG - chr7_2:70389732-70389751 None:intergenic 30.0%
!! TTGTTTTGTTGTGTGTTTGT+AGG + chr7_2:70389865-70389884 Msa1073050:intron 30.0%
!! TGTTTTGTTGTGTGTTTGTA+GGG + chr7_2:70389866-70389885 Msa1073050:intron 30.0%
!!! GCTTTTTCTTCATTTGTTGT+AGG + chr7_2:70389985-70390004 Msa1073050:CDS 30.0%
ATTGGTTATAACCTGTACAA+TGG - chr7_2:70390037-70390056 None:intergenic 30.0%
! TGTGTGTTTTGTGTATTTCT+AGG + chr7_2:70390118-70390137 Msa1073050:intron 30.0%
AGAATGAAGACTAATTTCAG+TGG + chr7_2:70390429-70390448 Msa1073050:three_prime_UTR 30.0%
! AAGACTAATTTCAGTGGATT+AGG + chr7_2:70390435-70390454 Msa1073050:three_prime_UTR 30.0%
TAGCCCAAAAAAACACTAAA+TGG - chr7_2:70390483-70390502 None:intergenic 30.0%
! CAATGTAGAAATTTGGGATT+TGG + chr7_2:70390511-70390530 Msa1073050:three_prime_UTR 30.0%
! TTGGGAAGACATGTAATTTT+AGG + chr7_2:70390530-70390549 Msa1073050:three_prime_UTR 30.0%
! TGGGAAGACATGTAATTTTA+GGG + chr7_2:70390531-70390550 Msa1073050:three_prime_UTR 30.0%
ATGAAAAAAGAGGAAAGTGA+AGG + chr7_2:70390662-70390681 Msa1073050:three_prime_UTR 30.0%
AAGACAGGGATATGGTAAAA+AGG - chr7_2:70387736-70387755 None:intergenic 35.0%
!! GATTTTGATGGAAGAAGACA+GGG - chr7_2:70387750-70387769 None:intergenic 35.0%
!!! TTGGTTTTGTGGGATTTTGA+TGG - chr7_2:70387762-70387781 None:intergenic 35.0%
!!! TGAAAGGGTTTTGGTTTTGT+GGG - chr7_2:70387772-70387791 None:intergenic 35.0%
! TTCTATGAGTTGAAGAGAAG+AGG - chr7_2:70387805-70387824 None:intergenic 35.0%
!!! CTTGAAGTTTTGAGTTATGG+GGG - chr7_2:70387888-70387907 None:intergenic 35.0%
! ATTTTACTGAACCATAGGCA+AGG - chr7_2:70387991-70388010 None:intergenic 35.0%
TTGCCTATGGTTCAGTAAAA+TGG + chr7_2:70387990-70388009 Msa1073050:CDS 35.0%
TTTATGCCTGAACATTGATC+TGG - chr7_2:70388031-70388050 None:intergenic 35.0%
!! CTGCAAAAAGTGCTACAAAA+CGG - chr7_2:70388054-70388073 None:intergenic 35.0%
ATGAAATGGAATGAGAGTAG+TGG - chr7_2:70388079-70388098 None:intergenic 35.0%
! GATTGTTGGTTGAGATGAAA+TGG - chr7_2:70388093-70388112 None:intergenic 35.0%
! TCCTAACACTCCTTTTCATT+TGG + chr7_2:70388167-70388186 Msa1073050:CDS 35.0%
!! ACCAAATGAAAAGGAGTGTT+AGG - chr7_2:70388171-70388190 None:intergenic 35.0%
! ACTTCCTAACACACTTGTTA+TGG + chr7_2:70388249-70388268 Msa1073050:CDS 35.0%
!! CTTCCTAACACACTTGTTAT+GGG + chr7_2:70388250-70388269 Msa1073050:CDS 35.0%
ATGGGCATTCCTTTGTTAAA+AGG + chr7_2:70388268-70388287 Msa1073050:CDS 35.0%
ATAATAGAACCAGCAGTATC+AGG - chr7_2:70388421-70388440 None:intergenic 35.0%
TCTGATGTTCTTTCTTTGGA+TGG + chr7_2:70388457-70388476 Msa1073050:CDS 35.0%
!!! GGAGTGAGATTTTTTCTAGA+AGG + chr7_2:70388560-70388579 Msa1073050:CDS 35.0%
TGATTAAAACTAGACCCTCT+TGG - chr7_2:70388682-70388701 None:intergenic 35.0%
AGTCCTAGACAATCTAACTT+TGG + chr7_2:70388742-70388761 Msa1073050:CDS 35.0%
CTTCCAAAGTTAGATTGTCT+AGG - chr7_2:70388748-70388767 None:intergenic 35.0%
!! AGTGGTGTTGGTAAAGTTAA+TGG + chr7_2:70388787-70388806 Msa1073050:CDS 35.0%
GGTAAAGTTAATGGAAATGG+TGG + chr7_2:70388796-70388815 Msa1073050:CDS 35.0%
! GTTAATGGAAATGGTGGAAA+TGG + chr7_2:70388802-70388821 Msa1073050:CDS 35.0%
ACCTGTGGCTAATAAGAAAA+AGG + chr7_2:70388858-70388877 Msa1073050:CDS 35.0%
CCTGTGGCTAATAAGAAAAA+GGG + chr7_2:70388859-70388878 Msa1073050:CDS 35.0%
! ACTTGGTAGTTGAATTAGCA+TGG + chr7_2:70389180-70389199 Msa1073050:intron 35.0%
TTGAATTAGCATGGCTTAAG+TGG + chr7_2:70389189-70389208 Msa1073050:intron 35.0%
TGAATTAGCATGGCTTAAGT+GGG + chr7_2:70389190-70389209 Msa1073050:intron 35.0%
GGAAATAGAACTGTTGCTAA+TGG + chr7_2:70389380-70389399 Msa1073050:CDS 35.0%
!!! GACTCATTTTGATTATGGTG+TGG + chr7_2:70389528-70389547 Msa1073050:CDS 35.0%
TGGTGTGGAGAAAATTGATT+AGG + chr7_2:70389543-70389562 Msa1073050:CDS 35.0%
!! CTTTCATATTGTTTTGCAGG+TGG + chr7_2:70389681-70389700 Msa1073050:intron 35.0%
ATAGCAATTCTATCTGATGC+TGG + chr7_2:70389737-70389756 Msa1073050:CDS 35.0%
TTTCCACAAGCAATAATCCT+TGG - chr7_2:70389910-70389929 None:intergenic 35.0%
!! TTCATTTGTTGTAGGACTCA+GGG + chr7_2:70389993-70390012 Msa1073050:CDS 35.0%
ATTCCTTGGCAAACACAAAA+GGG - chr7_2:70390166-70390185 None:intergenic 35.0%
TATTCCTTGGCAAACACAAA+AGG - chr7_2:70390167-70390186 None:intergenic 35.0%
AGGATGAACATTGTATTCCT+TGG - chr7_2:70390180-70390199 None:intergenic 35.0%
CATTAATGAATCTAGGTGCT+AGG - chr7_2:70390270-70390289 None:intergenic 35.0%
!!! TTTTAGGGCAATAGCTAGTT+AGG + chr7_2:70390546-70390565 Msa1073050:three_prime_UTR 35.0%
ATAGCTAGTTAGGTACTAGA+AGG + chr7_2:70390556-70390575 Msa1073050:three_prime_UTR 35.0%
GTGGAGTTCACAGTAAAAAA+AGG - chr7_2:70390616-70390635 None:intergenic 35.0%
CCAAGCAAAATATGCAAAAG+TGG - chr7_2:70390635-70390654 None:intergenic 35.0%
!! CCACTTTTGCATATTTTGCT+TGG + chr7_2:70390632-70390651 Msa1073050:three_prime_UTR 35.0%
AGGGATATGGTAAAAAGGTG+AGG - chr7_2:70387731-70387750 None:intergenic 40.0%
!! GGATTTTGATGGAAGAAGAC+AGG - chr7_2:70387751-70387770 None:intergenic 40.0%
!!! GTGAAAGGGTTTTGGTTTTG+TGG - chr7_2:70387773-70387792 None:intergenic 40.0%
! ATTAGGAGGTGAAAGGGTTT+TGG - chr7_2:70387781-70387800 None:intergenic 40.0%
!! AGTTGAAGAGAAGAGGCATT+AGG - chr7_2:70387798-70387817 None:intergenic 40.0%
GAAGTGAGGGAAAAAGAGAA+AGG - chr7_2:70387836-70387855 None:intergenic 40.0%
AGGATCATTGCTACATAGAG+TGG - chr7_2:70387971-70387990 None:intergenic 40.0%
! CCACCATTTTACTGAACCAT+AGG - chr7_2:70387996-70388015 None:intergenic 40.0%
CCTATGGTTCAGTAAAATGG+TGG + chr7_2:70387993-70388012 Msa1073050:CDS 40.0%
TTCACACCAGATCAATGTTC+AGG + chr7_2:70388022-70388041 Msa1073050:CDS 40.0%
GTTCATGGTGTAAGGATTGT+TGG - chr7_2:70388107-70388126 None:intergenic 40.0%
ATCCTTACACCATGAACTAC+AGG + chr7_2:70388110-70388129 Msa1073050:CDS 40.0%
AACCTGTAGTTCATGGTGTA+AGG - chr7_2:70388115-70388134 None:intergenic 40.0%
TGCTATGAACCTGTAGTTCA+TGG - chr7_2:70388122-70388141 None:intergenic 40.0%
ATGCCCATAACAAGTGTGTT+AGG - chr7_2:70388256-70388275 None:intergenic 40.0%
! GGAATGTATGGTGATGATTC+TGG + chr7_2:70388289-70388308 Msa1073050:CDS 40.0%
TGATGATTCTGGTACCCTTA+TGG + chr7_2:70388300-70388319 Msa1073050:CDS 40.0%
!! TGTTTGAATATAGGGGTGCT+AGG + chr7_2:70388374-70388393 Msa1073050:CDS 40.0%
ACTTCAGCTTCAGTTTGAAG+TGG - chr7_2:70388490-70388509 None:intergenic 40.0%
CTTCAAACTGAAGCTGAAGT+TGG + chr7_2:70388490-70388509 Msa1073050:CDS 40.0%
GAAAAAATCCCTGCACTATG+AGG - chr7_2:70388838-70388857 None:intergenic 40.0%
! CCCTTTTTCTTATTAGCCAC+AGG - chr7_2:70388862-70388881 None:intergenic 40.0%
GCTAATAAGAAAAAGGGCCA+TGG + chr7_2:70388865-70388884 Msa1073050:CDS 40.0%
AATAAGAAAAAGGGCCATGG+TGG + chr7_2:70388868-70388887 Msa1073050:CDS 40.0%
! TTTAGAGGTGGTGGTGATTA+TGG + chr7_2:70388976-70388995 Msa1073050:CDS 40.0%
AATGGAGTAGCTCACCAAAA+AGG + chr7_2:70389012-70389031 Msa1073050:CDS 40.0%
!!! GATTTGCCCCTTTTGACTTT+TGG + chr7_2:70389054-70389073 Msa1073050:intron 40.0%
GAATTAGCATGGCTTAAGTG+GGG + chr7_2:70389191-70389210 Msa1073050:intron 40.0%
! GGTCATGATGAGTTTAGCTT+TGG + chr7_2:70389359-70389378 Msa1073050:CDS 40.0%
TAGAACTGTTGCTAATGGTG+TGG + chr7_2:70389385-70389404 Msa1073050:CDS 40.0%
! AGTCTTGTCATAACACTAGC+AGG - chr7_2:70389512-70389531 None:intergenic 40.0%
ATAGACTTGGCAACAATAGC+AGG - chr7_2:70389719-70389738 None:intergenic 40.0%
TGTGTTTGTAGGGTTGTTCA+TGG + chr7_2:70389876-70389895 Msa1073050:intron 40.0%
AAGAAAAAGCCATGACAGCA+GGG - chr7_2:70389975-70389994 None:intergenic 40.0%
!! CTTCATTTGTTGTAGGACTC+AGG + chr7_2:70389992-70390011 Msa1073050:CDS 40.0%
!! TCATTTGTTGTAGGACTCAG+GGG + chr7_2:70389994-70390013 Msa1073050:CDS 40.0%
ACAAAAGGGACTATTCCTTG+GGG - chr7_2:70390152-70390171 None:intergenic 40.0%
CACAAAAGGGACTATTCCTT+GGG - chr7_2:70390153-70390172 None:intergenic 40.0%
ACACAAAAGGGACTATTCCT+TGG - chr7_2:70390154-70390173 None:intergenic 40.0%
ATCCTGACATTCTTAGCACT+GGG + chr7_2:70390195-70390214 Msa1073050:CDS 40.0%
!! AATCAGCTTTGTGCTCCTTT+TGG - chr7_2:70390737-70390756 None:intergenic 40.0%
GTGTCTATATAGGGCCTGTT+TGG - chr7_2:70387596-70387615 None:intergenic 45.0%
GATGGAAGAAGACAGGGATA+TGG - chr7_2:70387744-70387763 None:intergenic 45.0%
!! AGAGGCATTAGGAGGTGAAA+GGG - chr7_2:70387787-70387806 None:intergenic 45.0%
!! AAGAGGCATTAGGAGGTGAA+AGG - chr7_2:70387788-70387807 None:intergenic 45.0%
!! TGAAGAGAAGAGGCATTAGG+AGG - chr7_2:70387795-70387814 None:intergenic 45.0%
! AAGGTTAAGGGGGTGTGTTT+AGG - chr7_2:70387858-70387877 None:intergenic 45.0%
GTAGCAATGATCCTTGCCTA+TGG + chr7_2:70387977-70387996 Msa1073050:CDS 45.0%
TGGTCAAGAACAAGCTCAAG+AGG + chr7_2:70388187-70388206 Msa1073050:CDS 45.0%
GGTCAAGAACAAGCTCAAGA+GGG + chr7_2:70388188-70388207 Msa1073050:CDS 45.0%
GCTCAAGAGGGTCATTAGAA+TGG + chr7_2:70388200-70388219 Msa1073050:CDS 45.0%
!! AGGGGTGCTAGGATTCTTAT+TGG + chr7_2:70388385-70388404 Msa1073050:CDS 45.0%
GAACAGTTTCCTGATACTGC+TGG + chr7_2:70388409-70388428 Msa1073050:CDS 45.0%
!! GAAGCTGAAGTTGGTGAAGA+TGG + chr7_2:70388499-70388518 Msa1073050:CDS 45.0%
! AGGTCTCATGGTGTTAACTC+AGG + chr7_2:70388580-70388599 Msa1073050:CDS 45.0%
TCTAGAAACCCTACACCAAG+AGG + chr7_2:70388664-70388683 Msa1073050:CDS 45.0%
CTAGAAACCCTACACCAAGA+GGG + chr7_2:70388665-70388684 Msa1073050:CDS 45.0%
! AACTAGACCCTCTTGGTGTA+GGG - chr7_2:70388675-70388694 None:intergenic 45.0%
! AAACTAGACCCTCTTGGTGT+AGG - chr7_2:70388676-70388695 None:intergenic 45.0%
!! TGGAAGTTTGGGTTTTGACG+AGG + chr7_2:70388762-70388781 Msa1073050:CDS 45.0%
!! TTGGGTTTTGACGAGGAAAG+TGG + chr7_2:70388769-70388788 Msa1073050:CDS 45.0%
TTTGACGAGGAAAGTGGTGT+TGG + chr7_2:70388775-70388794 Msa1073050:CDS 45.0%
!!! TGCAGGGATTTTTTCACCTG+TGG + chr7_2:70388843-70388862 Msa1073050:CDS 45.0%
!! AGTGCTTCACCTGTTTCTGA+AGG + chr7_2:70388940-70388959 Msa1073050:CDS 45.0%
TGGATTCCACCTTCAGAAAC+AGG - chr7_2:70388952-70388971 None:intergenic 45.0%
GGTGGAATCCATGTCTTTAG+AGG + chr7_2:70388961-70388980 Msa1073050:CDS 45.0%
! GGAATCCATGTCTTTAGAGG+TGG + chr7_2:70388964-70388983 Msa1073050:CDS 45.0%
! ATCCATGTCTTTAGAGGTGG+TGG + chr7_2:70388967-70388986 Msa1073050:CDS 45.0%
GCTAATGGTGTGGACAAAGA+AGG + chr7_2:70389395-70389414 Msa1073050:CDS 45.0%
AGTTGAGCTTGAACCAAGCT+TGG - chr7_2:70389432-70389451 None:intergenic 45.0%
ACTGAGCTTCATCCTAAAGC+TGG + chr7_2:70389452-70389471 Msa1073050:CDS 45.0%
CATCCTAAAGCTGGATCTCA+AGG + chr7_2:70389461-70389480 Msa1073050:CDS 45.0%
TCACCTTGAGATCCAGCTTT+AGG - chr7_2:70389467-70389486 None:intergenic 45.0%
CTTGTCATAACACTAGCAGG+TGG - chr7_2:70389509-70389528 None:intergenic 45.0%
GAGACCAAGTGAGACCAATA+AGG - chr7_2:70389589-70389608 None:intergenic 45.0%
! TATTGGTCTCACTTGGTCTC+TGG + chr7_2:70389589-70389608 Msa1073050:CDS 45.0%
! ATTCTATCTGATGCTGGCCT+TGG + chr7_2:70389743-70389762 Msa1073050:CDS 45.0%
GGCTAAACATAGCCATTCCA+AGG - chr7_2:70389763-70389782 None:intergenic 45.0%
GGAATGGCTATGTTTAGCCT+TGG + chr7_2:70389764-70389783 Msa1073050:CDS 45.0%
CAGCCAAGGATTATTGCTTG+TGG + chr7_2:70389904-70389923 Msa1073050:CDS 45.0%
GAAGAAAAAGCCATGACAGC+AGG - chr7_2:70389976-70389995 None:intergenic 45.0%
GTTGCACATTGCCATTGTAC+AGG + chr7_2:70390023-70390042 Msa1073050:CDS 45.0%
! AGTCCCTTTTGTGTTTGCCA+AGG + chr7_2:70390160-70390179 Msa1073050:CDS 45.0%
CATCCTGACATTCTTAGCAC+TGG + chr7_2:70390194-70390213 Msa1073050:CDS 45.0%
AACCCAGTGCTAAGAATGTC+AGG - chr7_2:70390200-70390219 None:intergenic 45.0%
GGGGTGTGTTTAGGAAGTGA+GGG - chr7_2:70387849-70387868 None:intergenic 50.0%
GGGTGTGTTGAAGGTTAAGG+GGG - chr7_2:70387868-70387887 None:intergenic 50.0%
GGGGTGTGTTGAAGGTTAAG+GGG - chr7_2:70387869-70387888 None:intergenic 50.0%
! GGGGGTGTGTTGAAGGTTAA+GGG - chr7_2:70387870-70387889 None:intergenic 50.0%
! TGGGGGTGTGTTGAAGGTTA+AGG - chr7_2:70387871-70387890 None:intergenic 50.0%
! GAGTTATGGGGGTGTGTTGA+AGG - chr7_2:70387877-70387896 None:intergenic 50.0%
GTACTACTGCAGTGAGGACA+TGG - chr7_2:70387949-70387968 None:intergenic 50.0%
AGAGTGGTACTACTGCAGTG+AGG - chr7_2:70387955-70387974 None:intergenic 50.0%
AAGAAAAAGGGCCATGGTGG+TGG + chr7_2:70388871-70388890 Msa1073050:CDS 50.0%
!! GCTTCACCTGTTTCTGAAGG+TGG + chr7_2:70388943-70388962 Msa1073050:CDS 50.0%
! CACCACCACCTCTAAAGACA+TGG - chr7_2:70388972-70388991 None:intergenic 50.0%
GAACCAAGCTTGGATAGCAC+TGG - chr7_2:70389422-70389441 None:intergenic 50.0%
CTAGCAGGTGGCATGTTTGT+TGG - chr7_2:70389497-70389516 None:intergenic 50.0%
CCAAGTGAGACCAATAAGGC+TGG - chr7_2:70389585-70389604 None:intergenic 50.0%
!! CCAGCCTTATTGGTCTCACT+TGG + chr7_2:70389582-70389601 Msa1073050:CDS 50.0%
CTTGGTCTCTGGTCTCATTC+AGG + chr7_2:70389600-70389619 Msa1073050:CDS 50.0%
!! ATCTGATGCTGGCCTTGGAA+TGG + chr7_2:70389748-70389767 Msa1073050:CDS 50.0%
TGTTCATGGCATTGCAGCCA+AGG + chr7_2:70389890-70389909 Msa1073050:CDS 50.0%
! GGGGGTGTGTTTAGGAAGTG+AGG - chr7_2:70387850-70387869 None:intergenic 55.0%
TACCCTGCTCCTCATAGTGC+AGG + chr7_2:70388826-70388845 Msa1073050:CDS 55.0%
ACCCTGCTCCTCATAGTGCA+GGG + chr7_2:70388827-70388846 Msa1073050:CDS 55.0%
TCCCTGCACTATGAGGAGCA+GGG - chr7_2:70388831-70388850 None:intergenic 55.0%
ATCCCTGCACTATGAGGAGC+AGG - chr7_2:70388832-70388851 None:intergenic 55.0%
GGACCAGTGCTATCCAAGCT+TGG + chr7_2:70389416-70389435 Msa1073050:CDS 55.0%
CACCGTTGCTTCTTTCGCGA+TGG + chr7_2:70389930-70389949 Msa1073050:CDS 55.0%
CGCCATCGCGAAAGAAGCAA+CGG - chr7_2:70389935-70389954 None:intergenic 55.0%
CGTTGCTTCTTTCGCGATGG+CGG + chr7_2:70389933-70389952 Msa1073050:CDS 55.0%
ATGGCGGTTCGCTTCCTTAC+CGG + chr7_2:70389949-70389968 Msa1073050:CDS 55.0%
AAAAGCCATGACAGCAGGGC+CGG - chr7_2:70389971-70389990 None:intergenic 55.0%
TTCTAGGCTGCTCTTCCCCA+AGG + chr7_2:70390134-70390153 Msa1073050:intron 55.0%
CATCACCAGCACCACCACCA+TGG - chr7_2:70388885-70388904 None:intergenic 60.0%
!! CATGGTGGTGGTGCTGGTGA+TGG + chr7_2:70388883-70388902 Msa1073050:CDS 60.0%
!! AAGGGCCATGGTGGTGGTGC+TGG + chr7_2:70388877-70388896 Msa1073050:CDS 65.0%
!! GGTGGTGGTGCTGGTGATGG+TGG + chr7_2:70388886-70388905 Msa1073050:CDS 65.0%
CCATGACAGCAGGGCCGGTA+AGG - chr7_2:70389966-70389985 None:intergenic 65.0%
CCTTACCGGCCCTGCTGTCA+TGG + chr7_2:70389963-70389982 Msa1073050:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 70387592 70390772 70387592 ID=Msa1073050;Name=Msa1073050
chr7_2 mRNA 70387592 70390772 70387592 ID=Msa1073050-mRNA-1;Parent=Msa1073050;Name=Msa1073050-mRNA-1;_AED=0.07;_eAED=0.07;_QI=311|1|1|1|0.83|0.71|7|370|591
chr7_2 exon 70387592 70387795 70387592 ID=Msa1073050-mRNA-1:exon:15847;Parent=Msa1073050-mRNA-1
chr7_2 exon 70387816 70389033 70387816 ID=Msa1073050-mRNA-1:exon:15848;Parent=Msa1073050-mRNA-1
chr7_2 exon 70389345 70389621 70389345 ID=Msa1073050-mRNA-1:exon:15849;Parent=Msa1073050-mRNA-1
chr7_2 exon 70389700 70389785 70389700 ID=Msa1073050-mRNA-1:exon:15850;Parent=Msa1073050-mRNA-1
chr7_2 exon 70389887 70390044 70389887 ID=Msa1073050-mRNA-1:exon:15851;Parent=Msa1073050-mRNA-1
chr7_2 exon 70390140 70390216 70390140 ID=Msa1073050-mRNA-1:exon:15852;Parent=Msa1073050-mRNA-1
chr7_2 exon 70390336 70390772 70390336 ID=Msa1073050-mRNA-1:exon:15853;Parent=Msa1073050-mRNA-1
chr7_2 five_prime_UTR 70387592 70387795 70387592 ID=Msa1073050-mRNA-1:five_prime_utr;Parent=Msa1073050-mRNA-1
chr7_2 five_prime_UTR 70387816 70387922 70387816 ID=Msa1073050-mRNA-1:five_prime_utr;Parent=Msa1073050-mRNA-1
chr7_2 CDS 70387923 70389033 70387923 ID=Msa1073050-mRNA-1:cds;Parent=Msa1073050-mRNA-1
chr7_2 CDS 70389345 70389621 70389345 ID=Msa1073050-mRNA-1:cds;Parent=Msa1073050-mRNA-1
chr7_2 CDS 70389700 70389785 70389700 ID=Msa1073050-mRNA-1:cds;Parent=Msa1073050-mRNA-1
chr7_2 CDS 70389887 70390044 70389887 ID=Msa1073050-mRNA-1:cds;Parent=Msa1073050-mRNA-1
chr7_2 CDS 70390140 70390216 70390140 ID=Msa1073050-mRNA-1:cds;Parent=Msa1073050-mRNA-1
chr7_2 CDS 70390336 70390402 70390336 ID=Msa1073050-mRNA-1:cds;Parent=Msa1073050-mRNA-1
chr7_2 three_prime_UTR 70390403 70390772 70390403 ID=Msa1073050-mRNA-1:three_prime_utr;Parent=Msa1073050-mRNA-1
Gene Sequence

>Msa1073050

ATGATAAGTGCTTTAGACTTATACCATGTCCTCACTGCAGTAGTACCACTCTATGTAGCAATGATCCTTGCCTATGGTTCAGTAAAATGGTGGAAAATCTTCACACCAGATCAATGTTCAGGCATAAACCGTTTTGTAGCACTTTTTGCAGTTCCACTACTCTCATTCCATTTCATCTCAACCAACAATCCTTACACCATGAACTACAGGTTCATAGCAGCTGATTCACTGCAAAAAACAATCATCCTAACACTCCTTTTCATTTGGTCAAGAACAAGCTCAAGAGGGTCATTAGAATGGTCTATAACACTGTTTTCACTTTCAACACTTCCTAACACACTTGTTATGGGCATTCCTTTGTTAAAAGGAATGTATGGTGATGATTCTGGTACCCTTATGGTTCAAATAGTTGTTCTTCAATGTATCATTTGGTATACATTGATGTTGTTTTTGTTTGAATATAGGGGTGCTAGGATTCTTATTGGTGAACAGTTTCCTGATACTGCTGGTTCTATTATATCATTCAAAGTTGATTCTGATGTTCTTTCTTTGGATGGTAAAGAGCCACTTCAAACTGAAGCTGAAGTTGGTGAAGATGGAAAACTTCATGTCAAAGTTAGAAAATCAACTAGTTCAAGGAGTGAGATTTTTTCTAGAAGGTCTCATGGTGTTAACTCAGGTGTTTCTTTGACACCAAGACCTTCTAATTTGACTAATGCTGAGATTTATTCTCTTCAATCTTCTAGAAACCCTACACCAAGAGGGTCTAGTTTTAATCATACTGATTTTTATTCTATGGTGAATAATGGAAGAAATGTTAGTCCTAGACAATCTAACTTTGGAAGTTTGGGTTTTGACGAGGAAAGTGGTGTTGGTAAAGTTAATGGAAATGGTGGAAATGGCTACCCTGCTCCTCATAGTGCAGGGATTTTTTCACCTGTGGCTAATAAGAAAAAGGGCCATGGTGGTGGTGCTGGTGATGGTGGAAAAGACCTTCATATGTTTGTTTGGAGTTCAAGTGCTTCACCTGTTTCTGAAGGTGGAATCCATGTCTTTAGAGGTGGTGGTGATTATGGAAATGATCAACTTAATGGAGTAGCTCACCAAAAAGAATATGAAGAATTTGGTCATGATGAGTTTAGCTTTGGAAATAGAACTGTTGCTAATGGTGTGGACAAAGAAGGACCAGTGCTATCCAAGCTTGGTTCAAGCTCAACTACTGAGCTTCATCCTAAAGCTGGATCTCAAGGTGAAGCTAAGCCAACAAACATGCCACCTGCTAGTGTTATGACAAGACTCATTTTGATTATGGTGTGGAGAAAATTGATTAGGAATCCTAATACTTATTCCAGCCTTATTGGTCTCACTTGGTCTCTGGTCTCATTCAGGTGGAATGTTGTTATGCCTGCTATTGTTGCCAAGTCTATAGCAATTCTATCTGATGCTGGCCTTGGAATGGCTATGTTTAGCCTTGGGTTGTTCATGGCATTGCAGCCAAGGATTATTGCTTGTGGAAACACCGTTGCTTCTTTCGCGATGGCGGTTCGCTTCCTTACCGGCCCTGCTGTCATGGCTTTTTCTTCATTTGTTGTAGGACTCAGGGGAGTTCTGTTGCACATTGCCATTGTACAGGCTGCTCTTCCCCAAGGAATAGTCCCTTTTGTGTTTGCCAAGGAATACAATGTTCATCCTGACATTCTTAGCACTGGGGTTATATTTGGGATGCTAATTGCTCTTCCTATCACATTAGTTTATTACATTTTGTTGGGACTTTGA

Protein sequence

>Msa1073050

MISALDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYTMNYRFIAADSLQKTIILTLLFIWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDDSGTLMVQIVVLQCIIWYTLMLFLFEYRGARILIGEQFPDTAGSIISFKVDSDVLSLDGKEPLQTEAEVGEDGKLHVKVRKSTSSRSEIFSRRSHGVNSGVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNNGRNVSPRQSNFGSLGFDEESGVGKVNGNGGNGYPAPHSAGIFSPVANKKKGHGGGAGDGGKDLHMFVWSSSASPVSEGGIHVFRGGGDYGNDQLNGVAHQKEYEEFGHDEFSFGNRTVANGVDKEGPVLSKLGSSSTTELHPKAGSQGEAKPTNMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFRWNVVMPAIVAKSIAILSDAGLGMAMFSLGLFMALQPRIIACGNTVASFAMAVRFLTGPAVMAFSSFVVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL*