AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0782960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0782960 MtrunA17_Chr5g0447621 99.646 565 2 0 1 565 1 565 0.0 1163
Msa0782960 MtrunA17_Chr8g0376011 36.761 457 271 7 74 522 325 771 4.08e-87 286
Msa0782960 MtrunA17_Chr4g0019561 37.363 455 268 10 92 544 748 1187 8.57e-86 289
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0782960 AT5G48160.2 70.087 575 149 10 1 565 13 574 0.0 797
Msa0782960 AT5G48160.1 70.087 575 149 10 1 565 13 574 0.0 797
Msa0782960 AT3G07780.3 67.077 568 170 7 1 565 13 566 0.0 740
Msa0782960 AT3G07780.1 67.077 568 170 7 1 565 13 566 0.0 740
Msa0782960 AT3G07780.2 67.077 568 170 7 1 565 24 577 0.0 739
Msa0782960 AT3G63500.1 33.400 500 294 9 13 506 374 840 1.99e-78 265
Msa0782960 AT3G63500.2 36.105 421 251 6 92 506 707 1115 2.12e-77 266
Msa0782960 AT3G63500.3 36.105 421 251 6 92 506 707 1115 2.12e-77 266
Msa0782960 AT1G14740.1 34.396 439 243 6 89 522 305 703 7.12e-73 247

Find 165 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATTTAAACTTGAAAATT+AGG 0.148834 5_2:+66644422 Msa0782960:three_prime_UTR
TCCCTGAATTCCAGTATTTA+TGG 0.176236 5_2:-66642635 None:intergenic
AGGAGAGAGAAAGGGGATTT+AGG 0.191765 5_2:-66640921 None:intergenic
CTAATGACTGCCACCCTTTC+CGG 0.193878 5_2:+66644162 Msa0782960:CDS
ATTAATTATAAGCACTTAAT+AGG 0.209293 5_2:-66644404 None:intergenic
GTAAAGGAGATCATGGATTT+TGG 0.213920 5_2:-66644111 None:intergenic
AAATATACTTAGCAACTAAT+TGG 0.214209 5_2:-66644516 None:intergenic
TGCCATAAATACTGGAATTC+AGG 0.237888 5_2:+66642633 Msa0782960:CDS
CTTGAGTTCTTCTGCTTCTC+TGG 0.253475 5_2:-66643787 None:intergenic
TGTTTCTGCACAGATGAAAA+TGG 0.278620 5_2:-66640954 None:intergenic
GGCACTGATCCACTCTTTAC+AGG 0.283245 5_2:-66642937 None:intergenic
CATCAGCTGGAAGCTGGTTT+TGG 0.287912 5_2:-66642738 None:intergenic
TGGTTCAATTCCATTGCATT+TGG 0.288651 5_2:+66644278 Msa0782960:three_prime_UTR
ATCTTTGTCTCTTGTTTCTT+CGG 0.301294 5_2:+66642183 Msa0782960:CDS
TTAGATTGACTGTCTGCTTT+GGG 0.315236 5_2:-66644143 None:intergenic
GGTTCAATTCCATTGCATTT+GGG 0.319689 5_2:+66644279 Msa0782960:three_prime_UTR
ATCCTTGTTGCCATAAATAC+TGG 0.341420 5_2:+66642625 Msa0782960:CDS
CTTCTGTTTCAAATAGTTGC+TGG 0.354580 5_2:-66643979 None:intergenic
ATCGATGAGAGGAGAGAGAA+AGG 0.355577 5_2:-66640930 None:intergenic
TCCCTCCACGACAGCAATCC+CGG 0.370544 5_2:+66642143 Msa0782960:CDS
ATCGTGGGATGAACCTCTTT+TGG 0.374814 5_2:+66643118 Msa0782960:CDS
ATTAGATTGACTGTCTGCTT+TGG 0.379288 5_2:-66644144 None:intergenic
TGGCCTCATTAGCCTTCAAT+TGG 0.386901 5_2:-66643890 None:intergenic
GAGCCTCTCAGCCTCTCGTT+TGG 0.409388 5_2:-66643910 None:intergenic
TGTTCTATGCAGTGTTTGTA+TGG 0.409646 5_2:+66644371 Msa0782960:three_prime_UTR
TGCGGACAGAATCAGTCTTC+AGG 0.422728 5_2:+66642387 Msa0782960:CDS
GACATTGATTCGAGCTCATC+GGG 0.423325 5_2:+66642591 Msa0782960:CDS
GTATGAGAAAATCAAATTGC+AGG 0.425425 5_2:+66644034 Msa0782960:CDS
TTTGTTAGTAGGATCTTTCA+TGG 0.429043 5_2:+66643084 Msa0782960:CDS
AATAGCATCAGCAGTAGGCC+AGG 0.431940 5_2:-66642290 None:intergenic
GATGTGATTTGTGTTCTCAT+TGG 0.433032 5_2:+66642866 Msa0782960:CDS
CACCTGAAAACCATTTCACT+TGG 0.434640 5_2:-66642958 None:intergenic
GGCTGATATGTTCCAATTGA+AGG 0.436823 5_2:+66643878 Msa0782960:CDS
ATAAGTTGAAATTCGAAACT+AGG 0.440679 5_2:+66644346 Msa0782960:three_prime_UTR
CACTTTCAGTAGGTGATTCA+CGG 0.453441 5_2:-66642252 None:intergenic
AGCTTCACCGATTGGATTGG+AGG 0.456233 5_2:-66640987 None:intergenic
TGGATCAGTGCCAAGTGAAA+TGG 0.456270 5_2:+66642948 Msa0782960:CDS
TCTTGCGAAGTCTGATAAAT+CGG 0.461104 5_2:+66643944 Msa0782960:CDS
ATGAGTATTGGTCTAATTGT+TGG 0.461564 5_2:+66644196 Msa0782960:exon
CCCGGGATTGCTGTCGTGGA+GGG 0.462782 5_2:-66642144 None:intergenic
AGAAGCTTCACCGATTGGAT+TGG 0.463018 5_2:-66640990 None:intergenic
GCCATAAATACTGGAATTCA+GGG 0.463071 5_2:+66642634 Msa0782960:CDS
CCAGGCTCTTTGGAGAGTCT+AGG 0.472168 5_2:-66643593 None:intergenic
GATCGTCACACTTCCAAAAG+AGG 0.472222 5_2:-66643131 None:intergenic
ATACTCATCACGGGTTTGTC+CGG 0.472397 5_2:-66644181 None:intergenic
TGGAAGGTTGATTGCTCCAC+AGG 0.475183 5_2:+66643629 Msa0782960:CDS
TCGATGAGAGGAGAGAGAAA+GGG 0.475434 5_2:-66640929 None:intergenic
TGGAAGCTAAAGCAGCATGC+AGG 0.476217 5_2:+66643181 Msa0782960:CDS
ACTCTTTGTCAATTGTATAA+CGG 0.476695 5_2:-66644255 None:intergenic
CGATGAGAGGAGAGAGAAAG+GGG 0.477005 5_2:-66640928 None:intergenic
GTTCAATTCCATTGCATTTG+GGG 0.478354 5_2:+66644280 Msa0782960:three_prime_UTR
GCACTATAAGCCTTTGTGAA+TGG 0.479255 5_2:+66644302 Msa0782960:three_prime_UTR
TCCAACATTGTGCACCATCA+TGG 0.480513 5_2:+66643031 Msa0782960:CDS
GGCCATTGTAAAGGAGATCA+TGG 0.483195 5_2:-66644118 None:intergenic
CCAACCCGGGATTGCTGTCG+TGG 0.486754 5_2:-66642148 None:intergenic
CAGAATTGCTGAAGTGGTGC+AGG 0.488827 5_2:+66643662 Msa0782960:CDS
CGACGAATAACTGACTGATC+AGG 0.490361 5_2:-66642355 None:intergenic
CTTTGGGAGGGCCATTGTAA+AGG 0.496266 5_2:-66644127 None:intergenic
GATTGACTGTCTGCTTTGGG+AGG 0.497767 5_2:-66644140 None:intergenic
ATTGCAGAAGCCACTGTTGT+TGG 0.498959 5_2:-66642782 None:intergenic
GGACTTCGAGTTATCCTTGA+GGG 0.499090 5_2:+66642490 Msa0782960:CDS
GCTTGTCTCCTGAGGATCCT+AGG 0.499181 5_2:+66642212 Msa0782960:CDS
AACAATCATCAGCTGGAAGC+TGG 0.500810 5_2:-66642744 None:intergenic
GCAGGAGGCTATACGAAAGA+TGG 0.504278 5_2:+66643680 Msa0782960:CDS
ACTTCGCAAGAGCAATCCTC+TGG 0.508330 5_2:-66643932 None:intergenic
TGCTATTGCTGCGAAGAAGA+TGG 0.511035 5_2:+66642306 Msa0782960:CDS
GCAAATAAGTTGCTCCCGTA+TGG 0.512263 5_2:-66642905 None:intergenic
TCAGTCTTCAGGACATTGCT+CGG 0.513007 5_2:+66642398 Msa0782960:CDS
GGACTTCAGAACTGTTAGGC+TGG 0.513412 5_2:+66642995 Msa0782960:CDS
CTCACACAGATTGTGCCATA+CGG 0.513413 5_2:+66642890 Msa0782960:CDS
CCTAGACTCTCCAAAGAGCC+TGG 0.513548 5_2:+66643593 Msa0782960:CDS
CCCTCCACGACAGCAATCCC+GGG 0.515207 5_2:+66642144 Msa0782960:CDS
GTAAATACATGCCGTTGGAT+TGG 0.515809 5_2:+66642844 Msa0782960:CDS
GAAGGCTCGCTTAGCTGTTG+AGG 0.516614 5_2:+66643737 Msa0782960:CDS
ATCACGGGTTTGTCCGGAAA+GGG 0.518375 5_2:-66644175 None:intergenic
GACAAACCCGTGATGAGTAT+TGG 0.519442 5_2:+66644184 Msa0782960:exon
GAGTTTGACCTAGGATCCTC+AGG 0.521068 5_2:-66642220 None:intergenic
GTTCCAATTGAAGGCTAATG+AGG 0.521411 5_2:+66643887 Msa0782960:CDS
TTGAAGTAAATACATGCCGT+TGG 0.522716 5_2:+66642839 Msa0782960:CDS
CCCATGATGGTGCACAATGT+TGG 0.522804 5_2:-66643032 None:intergenic
TAAGCCTTTGTGAATGGAAG+AGG 0.525926 5_2:+66644308 Msa0782960:three_prime_UTR
GACTTCAGAACTGTTAGGCT+GGG 0.527791 5_2:+66642996 Msa0782960:CDS
GGCTGCGACAGACTAATGTT+AGG 0.528186 5_2:-66642667 None:intergenic
ATTGACTGTCTGCTTTGGGA+GGG 0.528716 5_2:-66644139 None:intergenic
AGAAGCAGAAGAACTCAAGA+TGG 0.529192 5_2:+66643791 Msa0782960:CDS
CAGTGTTTGTATGGATATGC+TGG 0.529285 5_2:+66644380 Msa0782960:three_prime_UTR
ACGGGAGCAACTTATTTGCA+TGG 0.531202 5_2:+66642909 Msa0782960:CDS
AGACATTGATTCGAGCTCAT+CGG 0.534133 5_2:+66642590 Msa0782960:CDS
ATGAGCTCGAATCAATGTCT+TGG 0.537389 5_2:-66642587 None:intergenic
AGCCTGGAAAATGTAGAAAG+TGG 0.542593 5_2:+66643609 Msa0782960:CDS
GTTATCCTTGAGGGAGGGAA+TGG 0.544054 5_2:+66642499 Msa0782960:CDS
TTGGAAGTGTGACGATCTCA+AGG 0.544756 5_2:+66643137 Msa0782960:CDS
CCAACATTGTGCACCATCAT+GGG 0.546323 5_2:+66643032 Msa0782960:CDS
CGACAGCAATCCCGGGTTGG+AGG 0.547481 5_2:+66642151 Msa0782960:CDS
TGTTTGCAGTCCTCCAACCC+GGG 0.548493 5_2:-66642161 None:intergenic
CAGTCTTCAGGACATTGCTC+GGG 0.548827 5_2:+66642399 Msa0782960:CDS
ATTCTGTTGCATGCCTCCTG+TGG 0.548889 5_2:-66643645 None:intergenic
ACCCGGGATTGCTGTCGTGG+AGG 0.553588 5_2:-66642145 None:intergenic
AAAATCAAGCTCCCTCATCA+AGG 0.557639 5_2:-66643064 None:intergenic
TCACAAGAACAATCATCAGC+TGG 0.558649 5_2:-66642751 None:intergenic
CGGGAGCAACTTATTTGCAT+GGG 0.558837 5_2:+66642910 Msa0782960:CDS
ACAGAAGTTAAGTGAGGCTG+AGG 0.558933 5_2:+66643995 Msa0782960:CDS
GGAAGCTAAAGCAGCATGCA+GGG 0.560687 5_2:+66643182 Msa0782960:CDS
AGATTCTCCTCCAATCCAAT+CGG 0.561940 5_2:+66640980 Msa0782960:five_prime_UTR
GCTGCGAAGAAGATGGAGAA+TGG 0.561971 5_2:+66642313 Msa0782960:CDS
TCACACAGATTGTGCCATAC+GGG 0.562732 5_2:+66642891 Msa0782960:CDS
TCAGGTGTCAATCATGCAGT+AGG 0.562912 5_2:+66642974 Msa0782960:CDS
ATGTTTGCAGTCCTCCAACC+CGG 0.569198 5_2:-66642162 None:intergenic
GAATACATCAGCATTGAAGA+GGG 0.569622 5_2:-66644089 None:intergenic
ATTGTGCACCATCATGGGAT+GGG 0.570954 5_2:+66643037 Msa0782960:CDS
CTAGAACTAGCACTTTCAGT+AGG 0.578007 5_2:-66642262 None:intergenic
CATTGTGCACCATCATGGGA+TGG 0.578553 5_2:+66643036 Msa0782960:CDS
AGTAGGACTTCAGAACTGTT+AGG 0.579004 5_2:+66642991 Msa0782960:CDS
TTATACAATTGACAAAGAGT+TGG 0.579432 5_2:+66644258 Msa0782960:three_prime_UTR
GGACATTGCTCGGGAAAGAG+TGG 0.584255 5_2:+66642408 Msa0782960:CDS
AATTAGACCAATACTCATCA+CGG 0.584915 5_2:-66644191 None:intergenic
GGAATACATCAGCATTGAAG+AGG 0.585828 5_2:-66644090 None:intergenic
CAATTGGAACATATCAGCCT+CGG 0.587516 5_2:-66643874 None:intergenic
GCATGCCATTCCCTCCCTCA+AGG 0.588171 5_2:-66642504 None:intergenic
CAGAAGAACTCAAGATGGAG+AGG 0.588684 5_2:+66643796 Msa0782960:CDS
CATCACGGGTTTGTCCGGAA+AGG 0.588989 5_2:-66644176 None:intergenic
ATTAGACCAATACTCATCAC+GGG 0.589911 5_2:-66644190 None:intergenic
TTGTGCACCATCATGGGATG+GGG 0.590598 5_2:+66643038 Msa0782960:CDS
AAGGAATCCCCATCCCATGA+TGG 0.593870 5_2:-66643045 None:intergenic
GAAGATGAGAATGTTCAAGA+AGG 0.594556 5_2:+66643719 Msa0782960:CDS
ATGGTAGTAAAGACCATCGT+GGG 0.598320 5_2:+66643103 Msa0782960:CDS
GAGAGGCTGAGAGGCTCCAG+AGG 0.598779 5_2:+66643916 Msa0782960:CDS
CCACGACAGCAATCCCGGGT+TGG 0.602524 5_2:+66642148 Msa0782960:CDS
GGATCCTCGCTTGTCTCCTG+AGG 0.602741 5_2:+66642204 Msa0782960:CDS
TTCCAGTATTTATGGCAACA+AGG 0.603589 5_2:-66642627 None:intergenic
AGAAATATCTCAATCAGCGA+TGG 0.603706 5_2:-66642688 None:intergenic
TGGAAAATGTAGAAAGTGGA+AGG 0.603944 5_2:+66643613 Msa0782960:CDS
ATGCAACAGAATTGCTGAAG+TGG 0.604458 5_2:+66643656 Msa0782960:CDS
ATGAAAATGGAATCGATGAG+AGG 0.607497 5_2:-66640941 None:intergenic
ATCCATGATCTCCTTTACAA+TGG 0.611502 5_2:+66644116 Msa0782960:CDS
CTTCGAGTTATCCTTGAGGG+AGG 0.614388 5_2:+66642493 Msa0782960:CDS
TTCGAGTTATCCTTGAGGGA+GGG 0.615596 5_2:+66642494 Msa0782960:CDS
GGCTAATGAGGCCAAACGAG+AGG 0.618483 5_2:+66643899 Msa0782960:CDS
AATTGCTGAAGTGGTGCAGG+AGG 0.618880 5_2:+66643665 Msa0782960:CDS
AGGTTATCAGAGTTTGACCT+AGG 0.619181 5_2:-66642229 None:intergenic
CACAGATTGAAGAACTAGAG+AGG 0.620430 5_2:+66643832 Msa0782960:CDS
TATTCGTCGTGTTTCTAGTG+CGG 0.628975 5_2:+66642369 Msa0782960:CDS
ACGGGTTTGTCCGGAAAGGG+TGG 0.629535 5_2:-66644172 None:intergenic
GTGCTAGTTCTAGAGAAACC+TGG 0.630706 5_2:+66642272 Msa0782960:CDS
TTTGAAACAGAAGTTAAGTG+AGG 0.634933 5_2:+66643989 Msa0782960:CDS
GCAGCAATAGCATCAGCAGT+AGG 0.640719 5_2:-66642295 None:intergenic
AAGAACTAGAGAGGATTGTG+AGG 0.642172 5_2:+66643841 Msa0782960:CDS
TTATAGTGCCCCAAATGCAA+TGG 0.642750 5_2:-66644288 None:intergenic
TGATCGTGAACTAGCAGACA+AGG 0.644648 5_2:+66643764 Msa0782960:CDS
ACAAATCACATCCAATCCAA+CGG 0.645811 5_2:-66642855 None:intergenic
GGATGGGGATTCCTTGATGA+GGG 0.648889 5_2:+66643053 Msa0782960:CDS
GGGATGGGGATTCCTTGATG+AGG 0.651572 5_2:+66643052 Msa0782960:CDS
AGGCCAAACGAGAGGCTGAG+AGG 0.658904 5_2:+66643907 Msa0782960:CDS
AAGGTTGATTGCTCCACAGG+AGG 0.659574 5_2:+66643632 Msa0782960:CDS
AGTACCTCTTCCATTCACAA+AGG 0.664298 5_2:-66644312 None:intergenic
ATGGGTCCTCCTGTAAAGAG+TGG 0.666155 5_2:+66642928 Msa0782960:CDS
TCTCGCTTATCGCAGAGCAG+TGG 0.671798 5_2:+66644062 Msa0782960:CDS
ACTGATCCACTCTTTACAGG+AGG 0.681348 5_2:-66642934 None:intergenic
CATGGTAGTAAAGACCATCG+TGG 0.686464 5_2:+66643102 Msa0782960:CDS
GAAACATGCACCAACAACAG+TGG 0.702295 5_2:+66642772 Msa0782960:CDS
TGGACTTCGAGTTATCCTTG+AGG 0.704359 5_2:+66642489 Msa0782960:CDS
GGATCCTCAGGAGACAAGCG+AGG 0.706361 5_2:-66642208 None:intergenic
AAAAGAGGTTCATCCCACGA+TGG 0.725729 5_2:-66643116 None:intergenic
AATACATCAGCATTGAAGAG+GGG 0.734552 5_2:-66644088 None:intergenic
TTTCAGTAGGTGATTCACGG+AGG 0.740333 5_2:-66642249 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCATTAAAAAAACTAAATT+AGG + chr5_2:66643355-66643374 Msa0782960:intron 10.0%
!! TTAATTTAAACTTGAAAATT+AGG + chr5_2:66644422-66644441 Msa0782960:three_prime_UTR 10.0%
!! AAAATTGAAGATGAAAAAAT+AGG - chr5_2:66641029-66641048 None:intergenic 15.0%
!!! TTTTCAAGTTTTGAAATTTA+TGG + chr5_2:66641144-66641163 Msa0782960:intron 15.0%
!! ATTAATTATAAGCACTTAAT+AGG - chr5_2:66644407-66644426 None:intergenic 15.0%
!!! TTGTTTTTGTTTAAGCTATA+AGG + chr5_2:66641863-66641882 Msa0782960:intron 20.0%
!! TTAATCATCAAGGAAATTAT+AGG - chr5_2:66642035-66642054 None:intergenic 20.0%
!!! TGACTGTATAAATATTTTCA+TGG + chr5_2:66642068-66642087 Msa0782960:intron 20.0%
!! AAAACTGAAAAGTAGAAAAA+TGG + chr5_2:66643161-66643180 Msa0782960:CDS 20.0%
!!! ATTCGTATGTGTTTAAAATT+GGG - chr5_2:66643435-66643454 None:intergenic 20.0%
!!! TATTCGTATGTGTTTAAAAT+TGG - chr5_2:66643436-66643455 None:intergenic 20.0%
!! GAATGAGGATAAATAAATAA+AGG - chr5_2:66643541-66643560 None:intergenic 20.0%
!!! ATTTTTCTTGTTGTTATAGC+TGG + chr5_2:66641044-66641063 Msa0782960:intron 25.0%
!! AATTTATGGTCAATTTTGTG+TGG + chr5_2:66641158-66641177 Msa0782960:intron 25.0%
!!! ATTTTGTTGTGAATTATGTG+TGG + chr5_2:66641299-66641318 Msa0782960:intron 25.0%
! AATCTAAGAAGCTACAAAAT+AGG - chr5_2:66641406-66641425 None:intergenic 25.0%
!! GTGTTATAAGCTTTTATTGT+AGG + chr5_2:66641634-66641653 Msa0782960:intron 25.0%
! ATGCTATACACTACAAATTA+AGG - chr5_2:66641799-66641818 None:intergenic 25.0%
!!! AATTGTTTTATATTAGAGCC+TGG - chr5_2:66642105-66642124 None:intergenic 25.0%
! GCTCTAATATAAAACAATTG+TGG + chr5_2:66642106-66642125 Msa0782960:intron 25.0%
! ACTCTTTGTCAATTGTATAA+CGG - chr5_2:66644258-66644277 None:intergenic 25.0%
! TTATACAATTGACAAAGAGT+TGG + chr5_2:66644258-66644277 Msa0782960:three_prime_UTR 25.0%
!! ATAAGTTGAAATTCGAAACT+AGG + chr5_2:66644346-66644365 Msa0782960:three_prime_UTR 25.0%
CAAAACTAGATCGAAATTCA+CGG - chr5_2:66641080-66641099 None:intergenic 30.0%
TCTAAGTTGTTTATCCAAAC+AGG - chr5_2:66641497-66641516 None:intergenic 30.0%
ATAAACTGCTTATCCAAACA+GGG - chr5_2:66641520-66641539 None:intergenic 30.0%
TATAAACTGCTTATCCAAAC+AGG - chr5_2:66641521-66641540 None:intergenic 30.0%
CATGATAAGCGCTTATATAT+AGG + chr5_2:66641555-66641574 Msa0782960:intron 30.0%
CTACAAATTAAGGATCTGTT+TGG - chr5_2:66641789-66641808 None:intergenic 30.0%
ATAAGCACTTGAAGACTATT+AGG - chr5_2:66641975-66641994 None:intergenic 30.0%
AATTATAGGACTGTTTGGAT+TGG - chr5_2:66642021-66642040 None:intergenic 30.0%
AAGGAAATTATAGGACTGTT+TGG - chr5_2:66642026-66642045 None:intergenic 30.0%
ACTAGAACAGTTAATCATCA+AGG - chr5_2:66642045-66642064 None:intergenic 30.0%
! ATCTTTGTCTCTTGTTTCTT+CGG + chr5_2:66642183-66642202 Msa0782960:CDS 30.0%
TTTGTTAGTAGGATCTTTCA+TGG + chr5_2:66643084-66643103 Msa0782960:CDS 30.0%
!! GCAATATTGACTGTTTTTCA+AGG + chr5_2:66643204-66643223 Msa0782960:CDS 30.0%
! TATCTGCATTGACATAATTG+TGG + chr5_2:66643267-66643286 Msa0782960:intron 30.0%
CTCACTTTCTATATCACATT+TGG + chr5_2:66643311-66643330 Msa0782960:intron 30.0%
TTTGGTTATGTCTGAACAAA+TGG + chr5_2:66643329-66643348 Msa0782960:intron 30.0%
!! GAAAAGCATTTGTTAGAATG+AGG - chr5_2:66643556-66643575 None:intergenic 30.0%
! TTTGAAACAGAAGTTAAGTG+AGG + chr5_2:66643989-66644008 Msa0782960:CDS 30.0%
GTATGAGAAAATCAAATTGC+AGG + chr5_2:66644034-66644053 Msa0782960:CDS 30.0%
AATTAGACCAATACTCATCA+CGG - chr5_2:66644194-66644213 None:intergenic 30.0%
!! ATGAGTATTGGTCTAATTGT+TGG + chr5_2:66644196-66644215 Msa0782960:exon 30.0%
ATGAAAATGGAATCGATGAG+AGG - chr5_2:66640944-66640963 None:intergenic 35.0%
! TGTTTCTGCACAGATGAAAA+TGG - chr5_2:66640957-66640976 None:intergenic 35.0%
! TTATGGTCAATTTTGTGTGG+TGG + chr5_2:66641161-66641180 Msa0782960:intron 35.0%
! TATGGTCAATTTTGTGTGGT+GGG + chr5_2:66641162-66641181 Msa0782960:intron 35.0%
! CTATGATGATGATGATGATG+TGG + chr5_2:66641232-66641251 Msa0782960:intron 35.0%
CATGAATTGCTGTAACTCTT+TGG + chr5_2:66641347-66641366 Msa0782960:intron 35.0%
AATTATGTGCTGTGGTATGT+AGG + chr5_2:66641470-66641489 Msa0782960:intron 35.0%
TAAACAACTTAGACCCTGTT+TGG + chr5_2:66641504-66641523 Msa0782960:intron 35.0%
GGTGTGTTCATAAACTATCT+TGG + chr5_2:66641884-66641903 Msa0782960:intron 35.0%
! TGTTTTATATTAGAGCCTGG+TGG - chr5_2:66642102-66642121 None:intergenic 35.0%
CTAAAAATTCACCAGGTAGA+CGG - chr5_2:66642456-66642475 None:intergenic 35.0%
!! TCTACCTGGTGAATTTTTAG+AGG + chr5_2:66642456-66642475 Msa0782960:CDS 35.0%
!! TTTTTAGAGGAGCTGAAAAC+TGG + chr5_2:66642469-66642488 Msa0782960:CDS 35.0%
ATCCTTGTTGCCATAAATAC+TGG + chr5_2:66642625-66642644 Msa0782960:CDS 35.0%
TTCCAGTATTTATGGCAACA+AGG - chr5_2:66642630-66642649 None:intergenic 35.0%
TGCCATAAATACTGGAATTC+AGG + chr5_2:66642633-66642652 Msa0782960:CDS 35.0%
GCCATAAATACTGGAATTCA+GGG + chr5_2:66642634-66642653 Msa0782960:CDS 35.0%
TCCCTGAATTCCAGTATTTA+TGG - chr5_2:66642638-66642657 None:intergenic 35.0%
AGAAATATCTCAATCAGCGA+TGG - chr5_2:66642691-66642710 None:intergenic 35.0%
TTGAAGTAAATACATGCCGT+TGG + chr5_2:66642839-66642858 Msa0782960:CDS 35.0%
ACAAATCACATCCAATCCAA+CGG - chr5_2:66642858-66642877 None:intergenic 35.0%
! GATGTGATTTGTGTTCTCAT+TGG + chr5_2:66642866-66642885 Msa0782960:CDS 35.0%
! TTCCACTTTCTACATTTTCC+AGG - chr5_2:66643614-66643633 None:intergenic 35.0%
TGGAAAATGTAGAAAGTGGA+AGG + chr5_2:66643613-66643632 Msa0782960:CDS 35.0%
GAAGATGAGAATGTTCAAGA+AGG + chr5_2:66643719-66643738 Msa0782960:CDS 35.0%
TCTTGCGAAGTCTGATAAAT+CGG + chr5_2:66643944-66643963 Msa0782960:CDS 35.0%
CTTCTGTTTCAAATAGTTGC+TGG - chr5_2:66643982-66644001 None:intergenic 35.0%
! AATACATCAGCATTGAAGAG+GGG - chr5_2:66644091-66644110 None:intergenic 35.0%
! GAATACATCAGCATTGAAGA+GGG - chr5_2:66644092-66644111 None:intergenic 35.0%
! GTAAAGGAGATCATGGATTT+TGG - chr5_2:66644114-66644133 None:intergenic 35.0%
ATCCATGATCTCCTTTACAA+TGG + chr5_2:66644116-66644135 Msa0782960:CDS 35.0%
TTAGATTGACTGTCTGCTTT+GGG - chr5_2:66644146-66644165 None:intergenic 35.0%
ATTAGATTGACTGTCTGCTT+TGG - chr5_2:66644147-66644166 None:intergenic 35.0%
ATTAGACCAATACTCATCAC+GGG - chr5_2:66644193-66644212 None:intergenic 35.0%
TGGTTCAATTCCATTGCATT+TGG + chr5_2:66644278-66644297 Msa0782960:three_prime_UTR 35.0%
GGTTCAATTCCATTGCATTT+GGG + chr5_2:66644279-66644298 Msa0782960:three_prime_UTR 35.0%
GTTCAATTCCATTGCATTTG+GGG + chr5_2:66644280-66644299 Msa0782960:three_prime_UTR 35.0%
TGTTCTATGCAGTGTTTGTA+TGG + chr5_2:66644371-66644390 Msa0782960:three_prime_UTR 35.0%
! TATTTTACGCAGTGTATGCA+TGG + chr5_2:66644447-66644466 Msa0782960:three_prime_UTR 35.0%
AGATTCTCCTCCAATCCAAT+CGG + chr5_2:66640980-66640999 Msa0782960:five_prime_UTR 40.0%
GCTGAATCAATTATGTGCTG+TGG + chr5_2:66641462-66641481 Msa0782960:intron 40.0%
!! TGTTTGGATTGGCTCATTTG+AGG - chr5_2:66642010-66642029 None:intergenic 40.0%
AGGTTATCAGAGTTTGACCT+AGG - chr5_2:66642232-66642251 None:intergenic 40.0%
CACTTTCAGTAGGTGATTCA+CGG - chr5_2:66642255-66642274 None:intergenic 40.0%
CTAGAACTAGCACTTTCAGT+AGG - chr5_2:66642265-66642284 None:intergenic 40.0%
!! TATTCGTCGTGTTTCTAGTG+CGG + chr5_2:66642369-66642388 Msa0782960:CDS 40.0%
! AGCTCCTCTAAAAATTCACC+AGG - chr5_2:66642463-66642482 None:intergenic 40.0%
ATGAGCTCGAATCAATGTCT+TGG - chr5_2:66642590-66642609 None:intergenic 40.0%
!! AGACATTGATTCGAGCTCAT+CGG + chr5_2:66642590-66642609 Msa0782960:CDS 40.0%
!! GGTTTTGGCAAGCTATGTTT+CGG - chr5_2:66642726-66642745 None:intergenic 40.0%
TCACAAGAACAATCATCAGC+TGG - chr5_2:66642754-66642773 None:intergenic 40.0%
GTAAATACATGCCGTTGGAT+TGG + chr5_2:66642844-66642863 Msa0782960:CDS 40.0%
! TGCCAAGTGAAATGGTTTTC+AGG + chr5_2:66642956-66642975 Msa0782960:CDS 40.0%
CACCTGAAAACCATTTCACT+TGG - chr5_2:66642961-66642980 None:intergenic 40.0%
AGTAGGACTTCAGAACTGTT+AGG + chr5_2:66642991-66643010 Msa0782960:CDS 40.0%
AAAATCAAGCTCCCTCATCA+AGG - chr5_2:66643067-66643086 None:intergenic 40.0%
! GGGAGCTTGATTTTGTTAGT+AGG + chr5_2:66643073-66643092 Msa0782960:CDS 40.0%
ATGGTAGTAAAGACCATCGT+GGG + chr5_2:66643103-66643122 Msa0782960:CDS 40.0%
! TCTACATTTTCCAGGCTCTT+TGG - chr5_2:66643606-66643625 None:intergenic 40.0%
AGCCTGGAAAATGTAGAAAG+TGG + chr5_2:66643609-66643628 Msa0782960:CDS 40.0%
ATGCAACAGAATTGCTGAAG+TGG + chr5_2:66643656-66643675 Msa0782960:CDS 40.0%
AGAAGCAGAAGAACTCAAGA+TGG + chr5_2:66643791-66643810 Msa0782960:CDS 40.0%
CACAGATTGAAGAACTAGAG+AGG + chr5_2:66643832-66643851 Msa0782960:CDS 40.0%
AAGAACTAGAGAGGATTGTG+AGG + chr5_2:66643841-66643860 Msa0782960:CDS 40.0%
CAATTGGAACATATCAGCCT+CGG - chr5_2:66643877-66643896 None:intergenic 40.0%
GGCTGATATGTTCCAATTGA+AGG + chr5_2:66643878-66643897 Msa0782960:CDS 40.0%
GTTCCAATTGAAGGCTAATG+AGG + chr5_2:66643887-66643906 Msa0782960:CDS 40.0%
! GGAATACATCAGCATTGAAG+AGG - chr5_2:66644093-66644112 None:intergenic 40.0%
TTATAGTGCCCCAAATGCAA+TGG - chr5_2:66644291-66644310 None:intergenic 40.0%
GCACTATAAGCCTTTGTGAA+TGG + chr5_2:66644302-66644321 Msa0782960:three_prime_UTR 40.0%
TAAGCCTTTGTGAATGGAAG+AGG + chr5_2:66644308-66644327 Msa0782960:three_prime_UTR 40.0%
AGTACCTCTTCCATTCACAA+AGG - chr5_2:66644315-66644334 None:intergenic 40.0%
CAGTGTTTGTATGGATATGC+TGG + chr5_2:66644380-66644399 Msa0782960:three_prime_UTR 40.0%
AGGAGAGAGAAAGGGGATTT+AGG - chr5_2:66640924-66640943 None:intergenic 45.0%
TCGATGAGAGGAGAGAGAAA+GGG - chr5_2:66640932-66640951 None:intergenic 45.0%
ATCGATGAGAGGAGAGAGAA+AGG - chr5_2:66640933-66640952 None:intergenic 45.0%
! AGAAGCTTCACCGATTGGAT+TGG - chr5_2:66640993-66641012 None:intergenic 45.0%
TGAGAAGAAGCTTCACCGAT+TGG - chr5_2:66640998-66641017 None:intergenic 45.0%
TGTGGTATGTAGGTCCTGTT+TGG + chr5_2:66641480-66641499 Msa0782960:intron 45.0%
TTTCAGTAGGTGATTCACGG+AGG - chr5_2:66642252-66642271 None:intergenic 45.0%
!! GTGCTAGTTCTAGAGAAACC+TGG + chr5_2:66642272-66642291 Msa0782960:CDS 45.0%
TGCTATTGCTGCGAAGAAGA+TGG + chr5_2:66642306-66642325 Msa0782960:CDS 45.0%
CGACGAATAACTGACTGATC+AGG - chr5_2:66642358-66642377 None:intergenic 45.0%
TCAGTCTTCAGGACATTGCT+CGG + chr5_2:66642398-66642417 Msa0782960:CDS 45.0%
GAAAAAATGCTCCGTCTACC+TGG + chr5_2:66642442-66642461 Msa0782960:CDS 45.0%
! TGGACTTCGAGTTATCCTTG+AGG + chr5_2:66642489-66642508 Msa0782960:CDS 45.0%
! GGACTTCGAGTTATCCTTGA+GGG + chr5_2:66642490-66642509 Msa0782960:CDS 45.0%
! TTCGAGTTATCCTTGAGGGA+GGG + chr5_2:66642494-66642513 Msa0782960:CDS 45.0%
!! GACATTGATTCGAGCTCATC+GGG + chr5_2:66642591-66642610 Msa0782960:CDS 45.0%
AACAATCATCAGCTGGAAGC+TGG - chr5_2:66642747-66642766 None:intergenic 45.0%
GAAACATGCACCAACAACAG+TGG + chr5_2:66642772-66642791 Msa0782960:CDS 45.0%
ATTGCAGAAGCCACTGTTGT+TGG - chr5_2:66642785-66642804 None:intergenic 45.0%
CTCACACAGATTGTGCCATA+CGG + chr5_2:66642890-66642909 Msa0782960:CDS 45.0%
TCACACAGATTGTGCCATAC+GGG + chr5_2:66642891-66642910 Msa0782960:CDS 45.0%
GCAAATAAGTTGCTCCCGTA+TGG - chr5_2:66642908-66642927 None:intergenic 45.0%
ACGGGAGCAACTTATTTGCA+TGG + chr5_2:66642909-66642928 Msa0782960:CDS 45.0%
CGGGAGCAACTTATTTGCAT+GGG + chr5_2:66642910-66642929 Msa0782960:CDS 45.0%
ACTGATCCACTCTTTACAGG+AGG - chr5_2:66642937-66642956 None:intergenic 45.0%
TGGATCAGTGCCAAGTGAAA+TGG + chr5_2:66642948-66642967 Msa0782960:CDS 45.0%
TCAGGTGTCAATCATGCAGT+AGG + chr5_2:66642974-66642993 Msa0782960:CDS 45.0%
GACTTCAGAACTGTTAGGCT+GGG + chr5_2:66642996-66643015 Msa0782960:CDS 45.0%
TCCAACATTGTGCACCATCA+TGG + chr5_2:66643031-66643050 Msa0782960:CDS 45.0%
CCAACATTGTGCACCATCAT+GGG + chr5_2:66643032-66643051 Msa0782960:CDS 45.0%
ATTGTGCACCATCATGGGAT+GGG + chr5_2:66643037-66643056 Msa0782960:CDS 45.0%
CATGGTAGTAAAGACCATCG+TGG + chr5_2:66643102-66643121 Msa0782960:CDS 45.0%
AAAAGAGGTTCATCCCACGA+TGG - chr5_2:66643119-66643138 None:intergenic 45.0%
! ATCGTGGGATGAACCTCTTT+TGG + chr5_2:66643118-66643137 Msa0782960:CDS 45.0%
GATCGTCACACTTCCAAAAG+AGG - chr5_2:66643134-66643153 None:intergenic 45.0%
! TTGGAAGTGTGACGATCTCA+AGG + chr5_2:66643137-66643156 Msa0782960:CDS 45.0%
AAAGGCAACAGCAGCATATC+TGG - chr5_2:66643523-66643542 None:intergenic 45.0%
CTAGGTCAAGCTCTTCATGT+AGG - chr5_2:66643578-66643597 None:intergenic 45.0%
TGATCGTGAACTAGCAGACA+AGG + chr5_2:66643764-66643783 Msa0782960:CDS 45.0%
CTTGAGTTCTTCTGCTTCTC+TGG - chr5_2:66643790-66643809 None:intergenic 45.0%
CAGAAGAACTCAAGATGGAG+AGG + chr5_2:66643796-66643815 Msa0782960:CDS 45.0%
TGTGAGGCTTAAAAATGCCG+AGG + chr5_2:66643857-66643876 Msa0782960:CDS 45.0%
!! TGGCCTCATTAGCCTTCAAT+TGG - chr5_2:66643893-66643912 None:intergenic 45.0%
ACAGAAGTTAAGTGAGGCTG+AGG + chr5_2:66643995-66644014 Msa0782960:CDS 45.0%
GGCCATTGTAAAGGAGATCA+TGG - chr5_2:66644121-66644140 None:intergenic 45.0%
!! ATTGACTGTCTGCTTTGGGA+GGG - chr5_2:66644142-66644161 None:intergenic 45.0%
ATACTCATCACGGGTTTGTC+CGG - chr5_2:66644184-66644203 None:intergenic 45.0%
GACAAACCCGTGATGAGTAT+TGG + chr5_2:66644184-66644203 Msa0782960:exon 45.0%
CGATGAGAGGAGAGAGAAAG+GGG - chr5_2:66640931-66640950 None:intergenic 50.0%
! AGCTTCACCGATTGGATTGG+AGG - chr5_2:66640990-66641009 None:intergenic 50.0%
TTCATGGACATGTCACCACC+AGG + chr5_2:66642084-66642103 Msa0782960:intron 50.0%
ATGTTTGCAGTCCTCCAACC+CGG - chr5_2:66642165-66642184 None:intergenic 50.0%
GAGTTTGACCTAGGATCCTC+AGG - chr5_2:66642223-66642242 None:intergenic 50.0%
AATAGCATCAGCAGTAGGCC+AGG - chr5_2:66642293-66642312 None:intergenic 50.0%
GCAGCAATAGCATCAGCAGT+AGG - chr5_2:66642298-66642317 None:intergenic 50.0%
GCTGCGAAGAAGATGGAGAA+TGG + chr5_2:66642313-66642332 Msa0782960:CDS 50.0%
TGCGGACAGAATCAGTCTTC+AGG + chr5_2:66642387-66642406 Msa0782960:CDS 50.0%
CAGTCTTCAGGACATTGCTC+GGG + chr5_2:66642399-66642418 Msa0782960:CDS 50.0%
! CTTCGAGTTATCCTTGAGGG+AGG + chr5_2:66642493-66642512 Msa0782960:CDS 50.0%
GTTATCCTTGAGGGAGGGAA+TGG + chr5_2:66642499-66642518 Msa0782960:CDS 50.0%
GGCTGCGACAGACTAATGTT+AGG - chr5_2:66642670-66642689 None:intergenic 50.0%
!! CATCAGCTGGAAGCTGGTTT+TGG - chr5_2:66642741-66642760 None:intergenic 50.0%
ATGGGTCCTCCTGTAAAGAG+TGG + chr5_2:66642928-66642947 Msa0782960:CDS 50.0%
!! GGCACTGATCCACTCTTTAC+AGG - chr5_2:66642940-66642959 None:intergenic 50.0%
GGACTTCAGAACTGTTAGGC+TGG + chr5_2:66642995-66643014 Msa0782960:CDS 50.0%
! CCCATGATGGTGCACAATGT+TGG - chr5_2:66643035-66643054 None:intergenic 50.0%
CATTGTGCACCATCATGGGA+TGG + chr5_2:66643036-66643055 Msa0782960:CDS 50.0%
TTGTGCACCATCATGGGATG+GGG + chr5_2:66643038-66643057 Msa0782960:CDS 50.0%
AAGGAATCCCCATCCCATGA+TGG - chr5_2:66643048-66643067 None:intergenic 50.0%
GGATGGGGATTCCTTGATGA+GGG + chr5_2:66643053-66643072 Msa0782960:CDS 50.0%
TGGAAGCTAAAGCAGCATGC+AGG + chr5_2:66643181-66643200 Msa0782960:CDS 50.0%
GGAAGCTAAAGCAGCATGCA+GGG + chr5_2:66643182-66643201 Msa0782960:CDS 50.0%
! TGGAAGGTTGATTGCTCCAC+AGG + chr5_2:66643629-66643648 Msa0782960:CDS 50.0%
! AAGGTTGATTGCTCCACAGG+AGG + chr5_2:66643632-66643651 Msa0782960:CDS 50.0%
ATTCTGTTGCATGCCTCCTG+TGG - chr5_2:66643648-66643667 None:intergenic 50.0%
CAGAATTGCTGAAGTGGTGC+AGG + chr5_2:66643662-66643681 Msa0782960:CDS 50.0%
AATTGCTGAAGTGGTGCAGG+AGG + chr5_2:66643665-66643684 Msa0782960:CDS 50.0%
GCAGGAGGCTATACGAAAGA+TGG + chr5_2:66643680-66643699 Msa0782960:CDS 50.0%
ACTTCGCAAGAGCAATCCTC+TGG - chr5_2:66643935-66643954 None:intergenic 50.0%
! CTTTGGGAGGGCCATTGTAA+AGG - chr5_2:66644130-66644149 None:intergenic 50.0%
! GATTGACTGTCTGCTTTGGG+AGG - chr5_2:66644143-66644162 None:intergenic 50.0%
CTAATGACTGCCACCCTTTC+CGG + chr5_2:66644162-66644181 Msa0782960:CDS 50.0%
ATCACGGGTTTGTCCGGAAA+GGG - chr5_2:66644178-66644197 None:intergenic 50.0%
TGTTTGCAGTCCTCCAACCC+GGG - chr5_2:66642164-66642183 None:intergenic 55.0%
GCTTGTCTCCTGAGGATCCT+AGG + chr5_2:66642212-66642231 Msa0782960:CDS 55.0%
GGACATTGCTCGGGAAAGAG+TGG + chr5_2:66642408-66642427 Msa0782960:CDS 55.0%
GGGATGGGGATTCCTTGATG+AGG + chr5_2:66643052-66643071 Msa0782960:CDS 55.0%
! CCAGGCTCTTTGGAGAGTCT+AGG - chr5_2:66643596-66643615 None:intergenic 55.0%
CCTAGACTCTCCAAAGAGCC+TGG + chr5_2:66643593-66643612 Msa0782960:CDS 55.0%
GAAGGCTCGCTTAGCTGTTG+AGG + chr5_2:66643737-66643756 Msa0782960:CDS 55.0%
GGCTAATGAGGCCAAACGAG+AGG + chr5_2:66643899-66643918 Msa0782960:CDS 55.0%
TCTCGCTTATCGCAGAGCAG+TGG + chr5_2:66644062-66644081 Msa0782960:CDS 55.0%
CATCACGGGTTTGTCCGGAA+AGG - chr5_2:66644179-66644198 None:intergenic 55.0%
TCCCTCCACGACAGCAATCC+CGG + chr5_2:66642143-66642162 Msa0782960:CDS 60.0%
GGATCCTCGCTTGTCTCCTG+AGG + chr5_2:66642204-66642223 Msa0782960:CDS 60.0%
GGATCCTCAGGAGACAAGCG+AGG - chr5_2:66642211-66642230 None:intergenic 60.0%
GCATGCCATTCCCTCCCTCA+AGG - chr5_2:66642507-66642526 None:intergenic 60.0%
AGGCCAAACGAGAGGCTGAG+AGG + chr5_2:66643907-66643926 Msa0782960:CDS 60.0%
GAGCCTCTCAGCCTCTCGTT+TGG - chr5_2:66643913-66643932 None:intergenic 60.0%
ACGGGTTTGTCCGGAAAGGG+TGG - chr5_2:66644175-66644194 None:intergenic 60.0%
CCCGGGATTGCTGTCGTGGA+GGG - chr5_2:66642147-66642166 None:intergenic 65.0%
CCCTCCACGACAGCAATCCC+GGG + chr5_2:66642144-66642163 Msa0782960:CDS 65.0%
ACCCGGGATTGCTGTCGTGG+AGG - chr5_2:66642148-66642167 None:intergenic 65.0%
CCAACCCGGGATTGCTGTCG+TGG - chr5_2:66642151-66642170 None:intergenic 65.0%
CCACGACAGCAATCCCGGGT+TGG + chr5_2:66642148-66642167 Msa0782960:CDS 65.0%
! CGACAGCAATCCCGGGTTGG+AGG + chr5_2:66642151-66642170 Msa0782960:CDS 65.0%
GAGAGGCTGAGAGGCTCCAG+AGG + chr5_2:66643916-66643935 Msa0782960:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 66640909 66644535 66640909 ID=Msa0782960;Name=Msa0782960
chr5_2 mRNA 66640909 66644535 66640909 ID=Msa0782960-mRNA-1;Parent=Msa0782960;Name=Msa0782960-mRNA-1;_AED=0.01;_eAED=0.01;_QI=97|1|1|1|0.5|0.33|3|339|565
chr5_2 exon 66640909 66641001 66640909 ID=Msa0782960-mRNA-1:exon:20000;Parent=Msa0782960-mRNA-1
chr5_2 exon 66642135 66643225 66642135 ID=Msa0782960-mRNA-1:exon:20001;Parent=Msa0782960-mRNA-1
chr5_2 exon 66643586 66644535 66643586 ID=Msa0782960-mRNA-1:exon:20002;Parent=Msa0782960-mRNA-1
chr5_2 five_prime_UTR 66640909 66641001 66640909 ID=Msa0782960-mRNA-1:five_prime_utr;Parent=Msa0782960-mRNA-1
chr5_2 five_prime_UTR 66642135 66642138 66642135 ID=Msa0782960-mRNA-1:five_prime_utr;Parent=Msa0782960-mRNA-1
chr5_2 CDS 66642139 66643225 66642139 ID=Msa0782960-mRNA-1:cds;Parent=Msa0782960-mRNA-1
chr5_2 CDS 66643586 66644196 66643586 ID=Msa0782960-mRNA-1:cds;Parent=Msa0782960-mRNA-1
chr5_2 three_prime_UTR 66644197 66644535 66644197 ID=Msa0782960-mRNA-1:three_prime_utr;Parent=Msa0782960-mRNA-1
Gene Sequence

>Msa0782960

ATGCTCCCTCCACGACAGCAATCCCGGGTTGGAGGACTGCAAACATCTTTGTCTCTTGTTTCTTCGGATCCTCGCTTGTCTCCTGAGGATCCTAGGTCAAACTCTGATAACCTCCGTGAATCACCTACTGAAAGTGCTAGTTCTAGAGAAACCTGGCCTACTGCTGATGCTATTGCTGCGAAGAAGATGGAGAATGGAAAAGCTGATATTGACTGTCCTGATCAGTCAGTTATTCGTCGTGTTTCTAGTGCGGACAGAATCAGTCTTCAGGACATTGCTCGGGAAAGAGTGGATGTAATACATGAAAAAATGCTCCGTCTACCTGGTGAATTTTTAGAGGAGCTGAAAACTGGACTTCGAGTTATCCTTGAGGGAGGGAATGGCATGCAGCATAGAGATGAGTTTTTCATTTTGCAGAAGCTTGTTCAGAGTAGATCTGATTTGACAGCCAAGACATTGATTCGAGCTCATCGGGTGCAGCTTGAAATCCTTGTTGCCATAAATACTGGAATTCAGGGATTTTTACATCCTAACATTAGTCTGTCGCAGCCATCGCTGATTGAGATATTTCTCTACAAGAGATGCCGAAACATAGCTTGCCAAAACCAGCTTCCAGCTGATGATTGTTCTTGTGAAACATGCACCAACAACAGTGGCTTCTGCAATCTTTGCATGTGTACTATCTGCAGCAAGTTTGACTTTGAAGTAAATACATGCCGTTGGATTGGATGTGATTTGTGTTCTCATTGGACTCACACAGATTGTGCCATACGGGAGCAACTTATTTGCATGGGTCCTCCTGTAAAGAGTGGATCAGTGCCAAGTGAAATGGTTTTCAGGTGTCAATCATGCAGTAGGACTTCAGAACTGTTAGGCTGGGTTAAAGATGTCTTCCAACATTGTGCACCATCATGGGATGGGGATTCCTTGATGAGGGAGCTTGATTTTGTTAGTAGGATCTTTCATGGTAGTAAAGACCATCGTGGGATGAACCTCTTTTGGAAGTGTGACGATCTCAAGGAAAAACTGAAAAGTAGAAAAATGGAAGCTAAAGCAGCATGCAGGGCAATATTGACTGTTTTTCAAGAGCTTGACCTAGACTCTCCAAAGAGCCTGGAAAATGTAGAAAGTGGAAGGTTGATTGCTCCACAGGAGGCATGCAACAGAATTGCTGAAGTGGTGCAGGAGGCTATACGAAAGATGGAATTTGTAGCTGATGAGAAGATGAGAATGTTCAAGAAGGCTCGCTTAGCTGTTGAGGCTTGTGATCGTGAACTAGCAGACAAGGCCAGAGAAGCAGAAGAACTCAAGATGGAGAGGCAAAAAAAGAAGTCACAGATTGAAGAACTAGAGAGGATTGTGAGGCTTAAAAATGCCGAGGCTGATATGTTCCAATTGAAGGCTAATGAGGCCAAACGAGAGGCTGAGAGGCTCCAGAGGATTGCTCTTGCGAAGTCTGATAAATCGGAAGAAGAATATACCAGCAACTATTTGAAACAGAAGTTAAGTGAGGCTGAGGCTGAGAAGCAATATCTGTATGAGAAAATCAAATTGCAGGAGAGTTCTCGCTTATCGCAGAGCAGTGGTGACCCCTCTTCAATGCTGATGTATTCCAAAATCCATGATCTCCTTTACAATGGCCCTCCCAAAGCAGACAGTCAATCTAATGACTGCCACCCTTTCCGGACAAACCCGTGA
Protein sequence

>Msa0782960

MLPPRQQSRVGGLQTSLSLVSSDPRLSPEDPRSNSDNLRESPTESASSRETWPTADAIAAKKMENGKADIDCPDQSVIRRVSSADRISLQDIARERVDVIHEKMLRLPGEFLEELKTGLRVILEGGNGMQHRDEFFILQKLVQSRSDLTAKTLIRAHRVQLEILVAINTGIQGFLHPNISLSQPSLIEIFLYKRCRNIACQNQLPADDCSCETCTNNSGFCNLCMCTICSKFDFEVNTCRWIGCDLCSHWTHTDCAIREQLICMGPPVKSGSVPSEMVFRCQSCSRTSELLGWVKDVFQHCAPSWDGDSLMRELDFVSRIFHGSKDHRGMNLFWKCDDLKEKLKSRKMEAKAACRAILTVFQELDLDSPKSLENVESGRLIAPQEACNRIAEVVQEAIRKMEFVADEKMRMFKKARLAVEACDRELADKAREAEELKMERQKKKSQIEELERIVRLKNAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTSNYLKQKLSEAEAEKQYLYEKIKLQESSRLSQSSGDPSSMLMYSKIHDLLYNGPPKADSQSNDCHPFRTNP*