Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679670 | XP_013455748.1 | 97.500 | 360 | 8 | 1 | 1 | 359 | 1 | 360 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679670 | sp|Q54NS9|AIFA_DICDI | 32.888 | 374 | 216 | 8 | 3 | 345 | 27 | 396 | 1.39e-53 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679670 | A0A072UJ51 | 97.500 | 360 | 8 | 1 | 1 | 359 | 1 | 360 | 0.0 | 709 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0679670 | 0.835540 | 1.581268e-56 | -8.615850e-47 |
| Msa0004480 | Msa0679670 | 0.829740 | 4.346934e-55 | -8.615850e-47 |
| Msa0006060 | Msa0679670 | 0.819659 | 1.034346e-52 | -8.615850e-47 |
| Msa0026630 | Msa0679670 | 0.849458 | 3.191908e-60 | -8.615850e-47 |
| Msa0043850 | Msa0679670 | 0.814470 | 1.515649e-51 | -8.615850e-47 |
| Msa0051960 | Msa0679670 | 0.821101 | 4.828520e-53 | -8.615850e-47 |
| Msa0052360 | Msa0679670 | 0.826222 | 3.054011e-54 | -8.615850e-47 |
| Msa0061220 | Msa0679670 | 0.866575 | 2.578866e-65 | -8.615850e-47 |
| Msa0061500 | Msa0679670 | 0.834309 | 3.229582e-56 | -8.615850e-47 |
| Msa0077370 | Msa0679670 | 0.811459 | 6.927928e-51 | -8.615850e-47 |
| Msa0082420 | Msa0679670 | 0.825470 | 4.606452e-54 | -8.615850e-47 |
| Msa0090380 | Msa0679670 | 0.859641 | 3.594648e-63 | -8.615850e-47 |
| Msa0090510 | Msa0679670 | 0.821410 | 4.097364e-53 | -8.615850e-47 |
| Msa0094710 | Msa0679670 | 0.834339 | 3.174323e-56 | -8.615850e-47 |
| Msa0095940 | Msa0679670 | 0.810868 | 9.306411e-51 | -8.615850e-47 |
| Msa0097370 | Msa0679670 | 0.818314 | 2.091186e-52 | -8.615850e-47 |
| Msa0097570 | Msa0679670 | 0.807751 | 4.337862e-50 | -8.615850e-47 |
| Msa0101960 | Msa0679670 | 0.826219 | 3.059273e-54 | -8.615850e-47 |
| Msa0114790 | Msa0679670 | 0.802506 | 5.432099e-49 | -8.615850e-47 |
| Msa0117520 | Msa0679670 | 0.851731 | 7.331037e-61 | -8.615850e-47 |
| Msa0604290 | Msa0679670 | 0.815797 | 7.689042e-52 | -8.615850e-47 |
| Msa0611060 | Msa0679670 | 0.825847 | 3.749712e-54 | -8.615850e-47 |
| Msa0613420 | Msa0679670 | 0.814735 | 1.323984e-51 | -8.615850e-47 |
| Msa0628810 | Msa0679670 | 0.818975 | 1.480460e-52 | -8.615850e-47 |
| Msa0629240 | Msa0679670 | 0.834930 | 2.253741e-56 | -8.615850e-47 |
| Msa0631320 | Msa0679670 | 0.826574 | 2.517919e-54 | -8.615850e-47 |
| Msa0632420 | Msa0679670 | 0.813518 | 2.457886e-51 | -8.615850e-47 |
| Msa0641130 | Msa0679670 | 0.907160 | 6.837960e-81 | -8.615850e-47 |
| Msa0645500 | Msa0679670 | 0.803996 | 2.669824e-49 | -8.615850e-47 |
| Msa0645530 | Msa0679670 | 0.802493 | 5.466540e-49 | -8.615850e-47 |
| Msa0667030 | Msa0679670 | 0.833358 | 5.584099e-56 | -8.615850e-47 |
| Msa0679670 | Msa0693750 | 0.818095 | 2.343935e-52 | -8.615850e-47 |
| Msa0679670 | Msa0696100 | 0.813452 | 2.541586e-51 | -8.615850e-47 |
| Msa0679670 | Msa0697680 | 0.812169 | 4.852936e-51 | -8.615850e-47 |
| Msa0679670 | Msa0703810 | 0.801241 | 9.880814e-49 | -8.615850e-47 |
| Msa0679670 | Msa0709120 | 0.811455 | 6.940317e-51 | -8.615850e-47 |
| Msa0679670 | Msa0713060 | 0.842534 | 2.438754e-58 | -8.615850e-47 |
| Msa0679670 | Msa0734280 | 0.814414 | 1.559942e-51 | -8.615850e-47 |
| Msa0679670 | Msa0734940 | 0.825909 | 3.624172e-54 | -8.615850e-47 |
| Msa0679670 | Msa0735550 | 0.805944 | 1.045212e-49 | -8.615850e-47 |
| Msa0679670 | Msa0743870 | 0.804808 | 1.808257e-49 | -8.615850e-47 |
| Msa0679670 | Msa0744640 | 0.868189 | 7.855313e-66 | -8.615850e-47 |
| Msa0679670 | Msa0769720 | 0.810083 | 1.375102e-50 | -8.615850e-47 |
| Msa0679670 | Msa0787790 | 0.832768 | 7.828456e-56 | -8.615850e-47 |
| Msa0679670 | Msa0795730 | 0.800650 | 1.304478e-48 | -8.615850e-47 |
| Msa0679670 | Msa0796580 | -0.802857 | 4.597961e-49 | -8.615850e-47 |
| Msa0679670 | Msa0798450 | 0.801989 | 6.939417e-49 | -8.615850e-47 |
| Msa0679670 | Msa0802240 | 0.811943 | 5.437475e-51 | -8.615850e-47 |
| Msa0679670 | Msa0810440 | 0.805849 | 1.094446e-49 | -8.615850e-47 |
| Msa0679670 | Msa0812530 | 0.833592 | 4.880362e-56 | -8.615850e-47 |
| Msa0679670 | Msa0812950 | 0.802291 | 6.015476e-49 | -8.615850e-47 |
| Msa0679670 | Msa0828200 | 0.812572 | 3.963984e-51 | -8.615850e-47 |
| Msa0679670 | Msa0830030 | 0.803579 | 3.258477e-49 | -8.615850e-47 |
| Msa0679670 | Msa0833270 | 0.833922 | 4.037838e-56 | -8.615850e-47 |
| Msa0679670 | Msa0841730 | 0.867753 | 1.084765e-65 | -8.615850e-47 |
| Msa0679670 | Msa0852790 | 0.822864 | 1.885401e-53 | -8.615850e-47 |
| Msa0679670 | Msa0863720 | 0.842036 | 3.303884e-58 | -8.615850e-47 |
| Msa0679670 | Msa0863990 | 0.872233 | 3.721241e-67 | -8.615850e-47 |
| Msa0679670 | Msa0870510 | 0.853483 | 2.319659e-61 | -8.615850e-47 |
| Msa0679670 | Msa0894710 | 0.810442 | 1.150183e-50 | -8.615850e-47 |
| Msa0679670 | Msa0896780 | 0.800000 | 1.769423e-48 | -8.615850e-47 |
| Msa0679670 | Msa0921420 | 0.800568 | 1.355987e-48 | -8.615850e-47 |
| Msa0679670 | Msa0930740 | 0.835281 | 1.838844e-56 | -8.615850e-47 |
| Msa0679670 | Msa0945130 | 0.865643 | 5.087146e-65 | -8.615850e-47 |
| Msa0679670 | Msa0994910 | 0.808087 | 3.679391e-50 | -8.615850e-47 |
| Msa0679670 | Msa1011250 | 0.835488 | 1.629997e-56 | -8.615850e-47 |
| Msa0679670 | Msa1015880 | 0.802297 | 5.997698e-49 | -8.615850e-47 |
| Msa0679670 | Msa1016960 | 0.851966 | 6.289143e-61 | -8.615850e-47 |
| Msa0679670 | Msa1023310 | 0.840780 | 7.074900e-58 | -8.615850e-47 |
| Msa0679670 | Msa1058200 | 0.842489 | 2.506543e-58 | -8.615850e-47 |
| Msa0679670 | Msa1059670 | 0.849029 | 4.202315e-60 | -8.615850e-47 |
| Msa0679670 | Msa1062040 | 0.872214 | 3.777874e-67 | -8.615850e-47 |
| Msa0679670 | Msa1063360 | 0.805453 | 1.325536e-49 | -8.615850e-47 |
| Msa0679670 | Msa1069890 | 0.810030 | 1.411813e-50 | -8.615850e-47 |
| Msa0679670 | Msa1070540 | 0.810677 | 1.023272e-50 | -8.615850e-47 |
| Msa0679670 | Msa1089190 | 0.839378 | 1.642613e-57 | -8.615850e-47 |
| Msa0679670 | Msa1096070 | 0.816974 | 4.192360e-52 | -8.615850e-47 |
| Msa0679670 | Msa1098940 | 0.804961 | 1.680301e-49 | -8.615850e-47 |
| Msa0679670 | Msa1101240 | 0.807946 | 3.942278e-50 | -8.615850e-47 |
| Msa0679670 | Msa1102820 | 0.826021 | 3.409078e-54 | -8.615850e-47 |
| Msa0679670 | Msa1104650 | 0.812878 | 3.396330e-51 | -8.615850e-47 |
| Msa0679670 | Msa1106310 | 0.822347 | 2.487478e-53 | -8.615850e-47 |
| Msa0679670 | Msa1107200 | 0.866003 | 3.915139e-65 | -8.615850e-47 |
| Msa0679670 | Msa1109810 | 0.843254 | 1.568676e-58 | -8.615850e-47 |
| Msa0679670 | Msa1131790 | 0.809006 | 2.342326e-50 | -8.615850e-47 |
| Msa0679670 | Msa1150780 | 0.860267 | 2.326977e-63 | -8.615850e-47 |
| Msa0679670 | Msa1168640 | 0.803569 | 3.274085e-49 | -8.615850e-47 |
| Msa0679670 | Msa1171140 | 0.803337 | 3.657439e-49 | -8.615850e-47 |
| Msa0679670 | Msa1173150 | 0.803766 | 2.980621e-49 | -8.615850e-47 |
| Msa0679670 | Msa1176380 | 0.801498 | 8.751052e-49 | -8.615850e-47 |
| Msa0679670 | Msa1180720 | 0.881848 | 1.706056e-70 | -8.615850e-47 |
| Msa0679670 | Msa1183140 | 0.830857 | 2.318982e-55 | -8.615850e-47 |
| Msa0679670 | Msa1184690 | 0.838655 | 2.527008e-57 | -8.615850e-47 |
| Msa0679670 | Msa1188350 | 0.833729 | 4.511172e-56 | -8.615850e-47 |
| Msa0679670 | Msa1191440 | 0.805770 | 1.137035e-49 | -8.615850e-47 |
| Msa0679670 | Msa1206270 | 0.855073 | 8.056673e-62 | -8.615850e-47 |
| Msa0679670 | Msa1206290 | 0.827399 | 1.598332e-54 | -8.615850e-47 |
| Msa0679670 | Msa1208370 | 0.806821 | 6.828018e-50 | -8.615850e-47 |
| Msa0679670 | Msa1208990 | 0.843237 | 1.585774e-58 | -8.615850e-47 |
| Msa0679670 | Msa1212050 | 0.801660 | 8.107258e-49 | -8.615850e-47 |
| Msa0679670 | Msa1214170 | 0.803257 | 3.799801e-49 | -8.615850e-47 |
| Msa0679670 | Msa1218160 | 0.837149 | 6.162577e-57 | -8.615850e-47 |
| Msa0679670 | Msa1221330 | 0.821300 | 4.345616e-53 | -8.615850e-47 |
| Msa0679670 | Msa1225580 | 0.860407 | 2.110807e-63 | -8.615850e-47 |
| Msa0679670 | Msa1229480 | 0.814786 | 1.289924e-51 | -8.615850e-47 |
| Msa0679670 | Msa1231710 | 0.857699 | 1.366442e-62 | -8.615850e-47 |
| Msa0679670 | Msa1234620 | 0.804373 | 2.228854e-49 | -8.615850e-47 |
| Msa0679670 | Msa1236470 | 0.848669 | 5.290247e-60 | -8.615850e-47 |
| Msa0679670 | Msa1238600 | 0.832258 | 1.047273e-55 | -8.615850e-47 |
| Msa0679670 | Msa1246780 | 0.820267 | 7.505391e-53 | -8.615850e-47 |
| Msa0679670 | Msa1246790 | 0.812154 | 4.891173e-51 | -8.615850e-47 |
| Msa0679670 | Msa1252810 | 0.846873 | 1.652479e-59 | -8.615850e-47 |
| Msa0679670 | Msa1256060 | 0.814678 | 1.363304e-51 | -8.615850e-47 |
| Msa0679670 | Msa1256810 | 0.859497 | 3.971164e-63 | -8.615850e-47 |
| Msa0679670 | Msa1259540 | 0.811359 | 7.283812e-51 | -8.615850e-47 |
| Msa0679670 | Msa1270050 | 0.816218 | 6.194859e-52 | -8.615850e-47 |
| Msa0679670 | Msa1272010 | 0.832724 | 8.028563e-56 | -8.615850e-47 |
| Msa0679670 | Msa1274380 | 0.866389 | 2.955718e-65 | -8.615850e-47 |
| Msa0679670 | Msa1275510 | 0.807146 | 5.828867e-50 | -8.615850e-47 |
| Msa0679670 | Msa1277780 | 0.838027 | 3.668532e-57 | -8.615850e-47 |
| Msa0679670 | Msa1280170 | 0.809406 | 1.922501e-50 | -8.615850e-47 |
| Msa0679670 | Msa1286210 | 0.825773 | 3.903796e-54 | -8.615850e-47 |
| Msa0679670 | Msa1286220 | 0.826875 | 2.133413e-54 | -8.615850e-47 |
| Msa0679670 | Msa1296240 | 0.811688 | 6.178643e-51 | -8.615850e-47 |
| Msa0679670 | Msa1298010 | 0.836518 | 8.926659e-57 | -8.615850e-47 |
| Msa0679670 | Msa1309760 | 0.845026 | 5.249007e-59 | -8.615850e-47 |
| Msa0679670 | Msa1312440 | 0.883028 | 6.341191e-71 | -8.615850e-47 |
| Msa0679670 | Msa1316460 | 0.840404 | 8.872693e-58 | -8.615850e-47 |
| Msa0679670 | Msa1352660 | 0.812200 | 4.778546e-51 | -8.615850e-47 |
| Msa0679670 | Msa1355510 | 0.860052 | 2.702816e-63 | -8.615850e-47 |
| Msa0679670 | Msa1355890 | 0.803488 | 3.404213e-49 | -8.615850e-47 |
| Msa0679670 | Msa1360020 | 0.805312 | 1.418862e-49 | -8.615850e-47 |
| Msa0679670 | Msa1364080 | 0.845363 | 4.256290e-59 | -8.615850e-47 |
| Msa0679670 | Msa1368610 | 0.822734 | 2.021930e-53 | -8.615850e-47 |
| Msa0679670 | Msa1369920 | -0.832387 | 9.730037e-56 | -8.615850e-47 |
| Msa0679670 | Msa1397390 | 0.818760 | 1.656309e-52 | -8.615850e-47 |
| Msa0679670 | Msa1404050 | 0.814427 | 1.549366e-51 | -8.615850e-47 |
| Msa0679670 | Msa1407760 | 0.819951 | 8.869194e-53 | -8.615850e-47 |
| Msa0679670 | Msa1407880 | 0.836470 | 9.185154e-57 | -8.615850e-47 |
| Msa0679670 | Msa1410310 | 0.801285 | 9.676842e-49 | -8.615850e-47 |
| Msa0679670 | Msa1419840 | 0.845323 | 4.362113e-59 | -8.615850e-47 |
| Msa0679670 | Msa1430130 | 0.803191 | 3.921859e-49 | -8.615850e-47 |
| Msa0679670 | Msa1433410 | 0.862044 | 6.696184e-64 | -8.615850e-47 |
| Msa0679670 | Msa1437730 | 0.815378 | 9.533825e-52 | -8.615850e-47 |
| Msa0679670 | Msa1443620 | 0.857555 | 1.507578e-62 | -8.615850e-47 |
| Msa0679670 | Msa1443640 | 0.824431 | 8.100930e-54 | -8.615850e-47 |
| Msa0679670 | Msa1458090 | 0.820641 | 6.160327e-53 | -8.615850e-47 |
| Msa0679670 | Msa1460750 | 0.801858 | 7.383618e-49 | -8.615850e-47 |
| Msa0136630 | Msa0679670 | 0.819903 | 9.096132e-53 | -8.615850e-47 |
| Msa0137860 | Msa0679670 | 0.857896 | 1.194442e-62 | -8.615850e-47 |
| Msa0137980 | Msa0679670 | 0.805751 | 1.147651e-49 | -8.615850e-47 |
| Msa0138900 | Msa0679670 | 0.831402 | 1.703812e-55 | -8.615850e-47 |
| Msa0139670 | Msa0679670 | 0.812730 | 3.659052e-51 | -8.615850e-47 |
| Msa0152560 | Msa0679670 | 0.843499 | 1.349819e-58 | -8.615850e-47 |
| Msa0160960 | Msa0679670 | 0.823981 | 1.033672e-53 | -8.615850e-47 |
| Msa0176260 | Msa0679670 | 0.802580 | 5.244753e-49 | -8.615850e-47 |
| Msa0183910 | Msa0679670 | 0.811331 | 7.386343e-51 | -8.615850e-47 |
| Msa0187310 | Msa0679670 | 0.844078 | 9.446937e-59 | -8.615850e-47 |
| Msa0190930 | Msa0679670 | 0.818791 | 1.630101e-52 | -8.615850e-47 |
| Msa0196880 | Msa0679670 | 0.814649 | 1.383350e-51 | -8.615850e-47 |
| Msa0198730 | Msa0679670 | 0.810690 | 1.016691e-50 | -8.615850e-47 |
| Msa0213430 | Msa0679670 | 0.806194 | 9.260636e-50 | -8.615850e-47 |
| Msa0213540 | Msa0679670 | 0.820136 | 8.044003e-53 | -8.615850e-47 |
| Msa0224130 | Msa0679670 | 0.851650 | 7.731869e-61 | -8.615850e-47 |
| Msa0225850 | Msa0679670 | 0.810101 | 1.362719e-50 | -8.615850e-47 |
| Msa0227360 | Msa0679670 | 0.824706 | 6.980015e-54 | -8.615850e-47 |
| Msa0233250 | Msa0679670 | 0.809043 | 2.299405e-50 | -8.615850e-47 |
| Msa0233970 | Msa0679670 | 0.800760 | 1.238824e-48 | -8.615850e-47 |
| Msa0364790 | Msa0679670 | 0.826460 | 2.679722e-54 | -8.615850e-47 |
| Msa0365950 | Msa0679670 | 0.817757 | 2.794500e-52 | -8.615850e-47 |
| Msa0366780 | Msa0679670 | 0.800259 | 1.567247e-48 | -8.615850e-47 |
| Msa0374870 | Msa0679670 | 0.802525 | 5.382945e-49 | -8.615850e-47 |
| Msa0374890 | Msa0679670 | 0.820845 | 5.530373e-53 | -8.615850e-47 |
| Msa0375070 | Msa0679670 | 0.812264 | 4.626254e-51 | -8.615850e-47 |
| Msa0380600 | Msa0679670 | 0.811965 | 5.376681e-51 | -8.615850e-47 |
| Msa0388730 | Msa0679670 | 0.866561 | 2.605912e-65 | -8.615850e-47 |
| Msa0389210 | Msa0679670 | 0.822886 | 1.863172e-53 | -8.615850e-47 |
| Msa0403770 | Msa0679670 | 0.807198 | 5.682587e-50 | -8.615850e-47 |
| Msa0412260 | Msa0679670 | 0.800783 | 1.225922e-48 | -8.615850e-47 |
| Msa0413870 | Msa0679670 | 0.839814 | 1.265011e-57 | -8.615850e-47 |
| Msa0414730 | Msa0679670 | 0.806750 | 7.069638e-50 | -8.615850e-47 |
| Msa0428200 | Msa0679670 | 0.800882 | 1.169985e-48 | -8.615850e-47 |
| Msa0430240 | Msa0679670 | 0.811701 | 6.136786e-51 | -8.615850e-47 |
| Msa0431900 | Msa0679670 | 0.821901 | 3.156257e-53 | -8.615850e-47 |
| Msa0470880 | Msa0679670 | 0.819734 | 9.939758e-53 | -8.615850e-47 |
| Msa0241480 | Msa0679670 | 0.827018 | 1.972681e-54 | -8.615850e-47 |
| Msa0260520 | Msa0679670 | 0.813631 | 2.321142e-51 | -8.615850e-47 |
| Msa0264680 | Msa0679670 | 0.859078 | 5.304662e-63 | -8.615850e-47 |
| Msa0265270 | Msa0679670 | 0.850628 | 1.501531e-60 | -8.615850e-47 |
| Msa0272400 | Msa0679670 | 0.801090 | 1.060961e-48 | -8.615850e-47 |
| Msa0276430 | Msa0679670 | 0.873825 | 1.089135e-67 | -8.615850e-47 |
| Msa0302730 | Msa0679670 | 0.871683 | 5.669190e-67 | -8.615850e-47 |
| Msa0302840 | Msa0679670 | 0.837665 | 4.544662e-57 | -8.615850e-47 |
| Msa0316470 | Msa0679670 | 0.844560 | 7.009950e-59 | -8.615850e-47 |
| Msa0319020 | Msa0679670 | 0.828185 | 1.034769e-54 | -8.615850e-47 |
| Msa0331020 | Msa0679670 | 0.827086 | 1.899329e-54 | -8.615850e-47 |
| Msa0332190 | Msa0679670 | 0.819976 | 8.750586e-53 | -8.615850e-47 |
| Msa0332200 | Msa0679670 | 0.803709 | 3.062670e-49 | -8.615850e-47 |
| Msa0484640 | Msa0679670 | 0.843784 | 1.132032e-58 | -8.615850e-47 |
| Msa0484800 | Msa0679670 | 0.821897 | 3.162524e-53 | -8.615850e-47 |
| Msa0518170 | Msa0679670 | 0.801117 | 1.047382e-48 | -8.615850e-47 |
| Msa0519160 | Msa0679670 | 0.861826 | 7.808968e-64 | -8.615850e-47 |
| Msa0520770 | Msa0679670 | 0.817385 | 3.389668e-52 | -8.615850e-47 |
| Msa0529000 | Msa0679670 | 0.812044 | 5.166833e-51 | -8.615850e-47 |
| Msa0532230 | Msa0679670 | 0.833684 | 4.630073e-56 | -8.615850e-47 |
| Msa0534870 | Msa0679670 | 0.845098 | 5.019258e-59 | -8.615850e-47 |
| Msa0536430 | Msa0679670 | 0.800038 | 1.738442e-48 | -8.615850e-47 |
| Msa0542560 | Msa0679670 | 0.803770 | 2.974494e-49 | -8.615850e-47 |
| Msa0545020 | Msa0679670 | 0.864256 | 1.385764e-64 | -8.615850e-47 |
| Msa0545050 | Msa0679670 | 0.908098 | 2.476551e-81 | -8.615850e-47 |
| Msa0558390 | Msa0679670 | 0.806641 | 7.453928e-50 | -8.615850e-47 |
| Msa0567480 | Msa0679670 | 0.803546 | 3.310230e-49 | -8.615850e-47 |
| Msa0567520 | Msa0679670 | 0.808850 | 2.528507e-50 | -8.615850e-47 |
| Msa0574930 | Msa0679670 | 0.806678 | 7.319938e-50 | -8.615850e-47 |
| Msa0584580 | Msa0679670 | 0.817847 | 2.666809e-52 | -8.615850e-47 |
| Msa0584600 | Msa0679670 | 0.829122 | 6.143264e-55 | -8.615850e-47 |
| Msa0588670 | Msa0679670 | 0.811821 | 5.780527e-51 | -8.615850e-47 |
| Msa0588710 | Msa0679670 | 0.813541 | 2.429513e-51 | -8.615850e-47 |
| Msa0592330 | Msa0679670 | 0.831163 | 1.950852e-55 | -8.615850e-47 |
| Msa0600590 | Msa0679670 | 0.908163 | 2.308896e-81 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679670 | MtrunA17_Chr4g0025621 | 97.500 | 360 | 8 | 1 | 1 | 359 | 1 | 360 | 0.0 | 709 |
| Msa0679670 | MtrunA17_Chr4g0025661 | 67.887 | 355 | 113 | 1 | 3 | 356 | 6 | 360 | 0.0 | 512 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679670 | AT5G22140.1 | 65.156 | 353 | 123 | 0 | 4 | 356 | 12 | 364 | 1.71e-171 | 482 |
| Msa0679670 | AT3G44190.1 | 63.173 | 353 | 130 | 0 | 4 | 356 | 12 | 364 | 2.92e-170 | 479 |
| Msa0679670 | AT3G44190.2 | 63.548 | 310 | 113 | 0 | 47 | 356 | 1 | 310 | 8.44e-148 | 420 |
| Msa0679670 | AT5G22140.2 | 64.516 | 310 | 110 | 0 | 47 | 356 | 1 | 310 | 1.77e-147 | 419 |
Find 73 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCAATAGCTTCAGATTCT+TGG | 0.228202 | 4_4:+37761674 | None:intergenic |
| AAGTCTTTCGGTCCTTGTTT+TGG | 0.248727 | 4_4:+37763391 | None:intergenic |
| AATGTCTTTCTTGAAGCTTT+TGG | 0.265463 | 4_4:+37762609 | None:intergenic |
| CTTCAAGAAAGACATTAAAA+TGG | 0.321115 | 4_4:-37762602 | Msa0679670:CDS |
| ACAATTGTTGGAAGGCTTCC+TGG | 0.324524 | 4_4:-37761549 | Msa0679670:CDS |
| ACTCCTTCACCAATGAAAAT+AGG | 0.334139 | 4_4:-37762530 | Msa0679670:CDS |
| GGAGGGAAAGAACGTAAATT+AGG | 0.346705 | 4_4:-37761648 | Msa0679670:CDS |
| TTCAGATTCAGTTATGTTGA+TGG | 0.355713 | 4_4:+37763487 | None:intergenic |
| TCAAGATTGCTAGAATATAT+TGG | 0.361205 | 4_4:-37762633 | Msa0679670:CDS |
| CTCTCAAGTGTTCATCAACT+TGG | 0.371778 | 4_4:+37762379 | None:intergenic |
| CCAAGTGAAACAATAGATAT+TGG | 0.377879 | 4_4:+37761606 | None:intergenic |
| TTTCCTTTCATGACAATTGT+TGG | 0.378561 | 4_4:-37761561 | Msa0679670:CDS |
| GAAAAGAAAGTTGTGATTAT+AGG | 0.392457 | 4_4:-37764498 | Msa0679670:CDS |
| ATTGCTTACCTCCTTTGTAT+TGG | 0.393585 | 4_4:+37763366 | None:intergenic |
| GATTATCTTGTTATCGCAAC+TGG | 0.394119 | 4_4:-37763431 | Msa0679670:CDS |
| TGATAAACAAATACTACTAT+AGG | 0.398204 | 4_4:+37761347 | None:intergenic |
| ATTATAGGAGGTGGTGTTGC+TGG | 0.401428 | 4_4:-37764483 | Msa0679670:CDS |
| TTTGTATTGGTCAAGTCTTT+CGG | 0.415825 | 4_4:+37763379 | None:intergenic |
| CTTCCTGGTATGATCAAGTC+TGG | 0.422078 | 4_4:-37761534 | Msa0679670:CDS |
| TTTCGCTATTGGAGACATTA+CGG | 0.432085 | 4_4:-37762337 | Msa0679670:CDS |
| AAGTCTGGAGATTTGTTTGT+TGG | 0.437062 | 4_4:-37761519 | Msa0679670:CDS |
| GGGAAAACAAGAAAGGGATT+AGG | 0.446814 | 4_4:-37761498 | Msa0679670:CDS |
| AGTCTGGAGATTTGTTTGTT+GGG | 0.447804 | 4_4:-37761518 | Msa0679670:CDS |
| AGATTCCATGGGCAAGTTTG+AGG | 0.451458 | 4_4:-37763595 | Msa0679670:CDS |
| GTTTGTTGGGAAAACAAGAA+AGG | 0.452444 | 4_4:-37761505 | Msa0679670:CDS |
| TGCGATAACAAGATAATCAT+AGG | 0.455029 | 4_4:+37763436 | None:intergenic |
| AATCTGAAGCTATTGATAGA+AGG | 0.457467 | 4_4:-37761669 | Msa0679670:CDS |
| GATTCCATGGGCAAGTTTGA+GGG | 0.459319 | 4_4:-37763594 | Msa0679670:CDS |
| TTTGTTGGGAAAACAAGAAA+GGG | 0.460435 | 4_4:-37761504 | Msa0679670:CDS |
| CCTAGCCATGCTGTAGAAAG+TGG | 0.461050 | 4_4:+37762444 | None:intergenic |
| CCAATATCTATTGTTTCACT+TGG | 0.467044 | 4_4:-37761606 | Msa0679670:CDS |
| CATAGAGAATATTTCACAAA+AGG | 0.477184 | 4_4:-37763530 | Msa0679670:CDS |
| CATTAAAATGGCTTCAATCA+AGG | 0.485208 | 4_4:-37762590 | Msa0679670:CDS |
| AAAGTGACTATAGTGCATAA+AGG | 0.487929 | 4_4:-37762657 | Msa0679670:CDS |
| ATAGGTACATTGGAATTCAA+TGG | 0.493983 | 4_4:+37761365 | None:intergenic |
| CTTTCATGACAATTGTTGGA+AGG | 0.497870 | 4_4:-37761557 | Msa0679670:CDS |
| GATTACTGTCCTTTCTGCAA+AGG | 0.514545 | 4_4:+37763556 | None:intergenic |
| TGTTATCGCAACTGGTCATA+CGG | 0.523541 | 4_4:-37763423 | Msa0679670:CDS |
| AAATACTACTATAGGTACAT+TGG | 0.524533 | 4_4:+37761355 | None:intergenic |
| AGGACATATCAAACTTCAGT+TGG | 0.525563 | 4_4:-37762510 | Msa0679670:CDS |
| GATAATCATAGGCAATTTCA+CGG | 0.532473 | 4_4:+37763447 | None:intergenic |
| CTGAAGCTATTGATAGAAGG+AGG | 0.535835 | 4_4:-37761666 | Msa0679670:CDS |
| TCTGAAGTCTTCACTGCTGA+TGG | 0.538947 | 4_4:-37763470 | Msa0679670:CDS |
| ATGGGCAAGTTTGAGGGCAA+TGG | 0.542856 | 4_4:-37763588 | Msa0679670:CDS |
| GCTGCTAGCTCGACACCTGT+TGG | 0.543775 | 4_4:+37762708 | None:intergenic |
| GTTTCACTTGGAAGAAAACA+TGG | 0.548086 | 4_4:-37761594 | Msa0679670:CDS |
| CTTCCAACAATTGTCATGAA+AGG | 0.551683 | 4_4:+37761558 | None:intergenic |
| GGCAAGTTTGAGGGCAATGG+TGG | 0.556542 | 4_4:-37763585 | Msa0679670:CDS |
| TGGAGCCATCCTTTGCAGAA+AGG | 0.564597 | 4_4:-37763565 | Msa0679670:CDS |
| ACTGTCCTTTCTGCAAAGGA+TGG | 0.565164 | 4_4:+37763560 | None:intergenic |
| AAAGTTGTGATTATAGGAGG+TGG | 0.565821 | 4_4:-37764492 | Msa0679670:CDS |
| TGATGAACACTTGAGAGTGA+AGG | 0.566526 | 4_4:-37762373 | Msa0679670:CDS |
| AAAGATGATTTGGATGGTCA+TGG | 0.566723 | 4_4:-37762408 | Msa0679670:CDS |
| AGTGAAACAATAGATATTGG+TGG | 0.570389 | 4_4:+37761609 | None:intergenic |
| GATGAACACTTGAGAGTGAA+GGG | 0.572721 | 4_4:-37762372 | Msa0679670:CDS |
| AAGAAAGTTGTGATTATAGG+AGG | 0.578925 | 4_4:-37764495 | Msa0679670:CDS |
| TCTCCAGACTTGATCATACC+AGG | 0.579617 | 4_4:+37761531 | None:intergenic |
| CCACTTTCTACAGCATGGCT+AGG | 0.581011 | 4_4:-37762444 | Msa0679670:CDS |
| AACACTTGAGAGTGAAGGGA+AGG | 0.595868 | 4_4:-37762368 | Msa0679670:CDS |
| TTTCTGAAAGATGATTTGGA+TGG | 0.601708 | 4_4:-37762414 | Msa0679670:CDS |
| CGGAATCTATCCCCAAAACA+AGG | 0.611323 | 4_4:-37763403 | Msa0679670:CDS |
| AACATACACAAATAATAACT+AGG | 0.612632 | 4_4:+37761409 | None:intergenic |
| ATTGCCCTCAAACTTGCCCA+TGG | 0.614496 | 4_4:+37763590 | None:intergenic |
| ATGATTTGGATGGTCATGGA+AGG | 0.615413 | 4_4:-37762404 | Msa0679670:CDS |
| ACGTAAATTAGGTACTTACA+AGG | 0.616980 | 4_4:-37761637 | Msa0679670:CDS |
| TGAAGCTATTGATAGAAGGA+GGG | 0.623657 | 4_4:-37761665 | Msa0679670:CDS |
| CGAGCTAGCAGCAGAGATTG+CGG | 0.623893 | 4_4:-37762697 | Msa0679670:CDS |
| GGAAACCACTTTCTACAGCA+TGG | 0.633582 | 4_4:-37762449 | Msa0679670:CDS |
| GAAAGACTTGACCAATACAA+AGG | 0.653500 | 4_4:-37763377 | Msa0679670:CDS |
| TGATGGCACTTGATATAACA+AGG | 0.655923 | 4_4:+37763504 | None:intergenic |
| AAACAAGGAGTGTATGCACA+AGG | 0.668753 | 4_4:-37761714 | Msa0679670:CDS |
| AGACTTGACCAATACAAAGG+AGG | 0.681103 | 4_4:-37763374 | Msa0679670:intron |
| ATGTTACAGGAAATAAAACA+AGG | 0.698106 | 4_4:-37761729 | Msa0679670:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTACAAAGATAAAATAAAAA+TGG | - | chr4_4:37761360-37761379 | Msa0679670:three_prime_UTR | 10.0% |
| !!! | CATTTATTTAAAACATTATA+TGG | - | chr4_4:37762196-37762215 | Msa0679670:intron | 10.0% |
| !!! | AATTAAGATTTTTTAACATT+AGG | + | chr4_4:37764418-37764437 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAGAGCA+TGG | + | chr4_4:37761518-37761537 | None:intergenic | 15.0% |
| !!! | TGTGTTAAATTTAATTTGAA+AGG | - | chr4_4:37761580-37761599 | Msa0679670:CDS | 15.0% |
| !!! | TAAACTAAAATTCAACTTTT+TGG | + | chr4_4:37761734-37761753 | None:intergenic | 15.0% |
| !!! | TTTAGTTTAGAATTTTGATA+TGG | - | chr4_4:37761745-37761764 | Msa0679670:intron | 15.0% |
| !! | AAAAAATCTGTATTGAAATA+TGG | + | chr4_4:37762898-37762917 | None:intergenic | 15.0% |
| !!! | TTTGTCTTATTTTTTATCTT+TGG | - | chr4_4:37763603-37763622 | Msa0679670:CDS | 15.0% |
| !!! | TTGTCTTATTTTTTATCTTT+GGG | - | chr4_4:37763604-37763623 | Msa0679670:CDS | 15.0% |
| !!! | ATTTTATATATCTTGTTAGA+TGG | + | chr4_4:37763655-37763674 | None:intergenic | 15.0% |
| !!! | ATCAAAATTTTGTTTTAACT+AGG | + | chr4_4:37764118-37764137 | None:intergenic | 15.0% |
| !! | AAAATTGAAATATATGTTAC+AGG | - | chr4_4:37764141-37764160 | Msa0679670:intron | 15.0% |
| !! | CAAAGATAAAATAAAAATGG+TGG | - | chr4_4:37761363-37761382 | Msa0679670:three_prime_UTR | 20.0% |
| !! | GTAACTAAAATAATATCGAT+TGG | - | chr4_4:37761602-37761621 | Msa0679670:CDS | 20.0% |
| !! | TATATTCTTTCTCTATGAAT+TGG | - | chr4_4:37761698-37761717 | Msa0679670:CDS | 20.0% |
| !! | AATTCTAGCAATTAATAGTA+TGG | + | chr4_4:37762806-37762825 | None:intergenic | 20.0% |
| !! | TACTATTAATTGCTAGAATT+TGG | - | chr4_4:37762806-37762825 | Msa0679670:intron | 20.0% |
| !! | AACATACACAAATAATAACT+AGG | + | chr4_4:37764477-37764496 | None:intergenic | 20.0% |
| !! | TGATAAACAAATACTACTAT+AGG | + | chr4_4:37764539-37764558 | None:intergenic | 20.0% |
| ! | GAAAAGAAAGTTGTGATTAT+AGG | - | chr4_4:37761385-37761404 | Msa0679670:three_prime_UTR | 25.0% |
| !! | AGATAAGTAAAGACTAGTTA+AGG | + | chr4_4:37761657-37761676 | None:intergenic | 25.0% |
| !!! | TTAGAATTTTGATATGGTAC+TGG | - | chr4_4:37761751-37761770 | Msa0679670:intron | 25.0% |
| ! | TCATGCAGTGATTATTTATT+TGG | - | chr4_4:37761827-37761846 | Msa0679670:intron | 25.0% |
| ! | TAGTAAAATGTTGACAAATG+TGG | - | chr4_4:37762060-37762079 | Msa0679670:intron | 25.0% |
| !! | ACCACAATTTAAAACTGTAT+CGG | - | chr4_4:37762136-37762155 | Msa0679670:intron | 25.0% |
| !! | CTTTTGTGAAATATTCTCTA+TGG | + | chr4_4:37762355-37762374 | None:intergenic | 25.0% |
| ! | CATAGAGAATATTTCACAAA+AGG | - | chr4_4:37762353-37762372 | Msa0679670:CDS | 25.0% |
| ! | AACTGATCAAATATCAATCA+GGG | - | chr4_4:37762584-37762603 | Msa0679670:CDS | 25.0% |
| !! | TTTTCTGTCATTGAAACAAA+AGG | + | chr4_4:37763109-37763128 | None:intergenic | 25.0% |
| !!! | ACTATAGTCACTTTTTTATC+AGG | + | chr4_4:37763220-37763239 | None:intergenic | 25.0% |
| ! | TCAAGATTGCTAGAATATAT+TGG | - | chr4_4:37763250-37763269 | Msa0679670:intron | 25.0% |
| ! | CTTCAAGAAAGACATTAAAA+TGG | - | chr4_4:37763281-37763300 | Msa0679670:intron | 25.0% |
| !! | TTGATATGTCCTATTTTCAT+TGG | + | chr4_4:37763365-37763384 | None:intergenic | 25.0% |
| !! | ATGCACATTTTCTATGTATA+GGG | - | chr4_4:37763413-37763432 | Msa0679670:CDS | 25.0% |
| !!! | AACTTTTCTGAAAGATGATT+TGG | - | chr4_4:37763465-37763484 | Msa0679670:CDS | 25.0% |
| ! | AAAAATAAGACAAATCGACT+TGG | + | chr4_4:37763597-37763616 | None:intergenic | 25.0% |
| ! | ATATATCTTGTTAGATGGAA+AGG | + | chr4_4:37763650-37763669 | None:intergenic | 25.0% |
| ! | ATGTTACAGGAAATAAAACA+AGG | - | chr4_4:37764154-37764173 | Msa0679670:intron | 25.0% |
| !! | TGTATGTTTGTGTTTTCTTT+CGG | - | chr4_4:37764489-37764508 | Msa0679670:CDS | 25.0% |
| ! | AAATACTACTATAGGTACAT+TGG | + | chr4_4:37764531-37764550 | None:intergenic | 25.0% |
| !!! | ACTTTTGTAAGTTTTGTGAA+TGG | - | chr4_4:37764564-37764583 | Msa0679670:five_prime_UTR | 25.0% |
| AAGAAAGTTGTGATTATAGG+AGG | - | chr4_4:37761388-37761407 | Msa0679670:three_prime_UTR | 30.0% | |
| !!! | GATGTTGTATAGTTTTAGCA+AGG | + | chr4_4:37761432-37761451 | None:intergenic | 30.0% |
| !! | AAGACTAGTTAAGGATGTTT+TGG | + | chr4_4:37761648-37761667 | None:intergenic | 30.0% |
| GAATATAGTAATCCAGAGTT+CGG | + | chr4_4:37761685-37761704 | None:intergenic | 30.0% | |
| ATTCTTTCTCTATGAATTGG+AGG | - | chr4_4:37761701-37761720 | Msa0679670:CDS | 30.0% | |
| TTCTTTCTCTATGAATTGGA+GGG | - | chr4_4:37761702-37761721 | Msa0679670:CDS | 30.0% | |
| !! | ATGCTGATGGTTCTAAATTT+AGG | - | chr4_4:37761999-37762018 | Msa0679670:intron | 30.0% |
| !! | CCACAATATAAAGGTTTTAG+AGG | + | chr4_4:37762110-37762129 | None:intergenic | 30.0% |
| !! | CCTCTAAAACCTTTATATTG+TGG | - | chr4_4:37762107-37762126 | Msa0679670:intron | 30.0% |
| AAACCTTTATATTGTGGTTG+TGG | - | chr4_4:37762113-37762132 | Msa0679670:intron | 30.0% | |
| !!! | TCCGATACAGTTTTAAATTG+TGG | + | chr4_4:37762140-37762159 | None:intergenic | 30.0% |
| !! | TATGGAACTTGTTGTGTAAA+TGG | - | chr4_4:37762214-37762233 | Msa0679670:intron | 30.0% |
| !! | TAATAAGAGTTGATGAACAC+AGG | - | chr4_4:37762252-37762271 | Msa0679670:intron | 30.0% |
| TTCAGATTCAGTTATGTTGA+TGG | + | chr4_4:37762399-37762418 | None:intergenic | 30.0% | |
| GATAATCATAGGCAATTTCA+CGG | + | chr4_4:37762439-37762458 | None:intergenic | 30.0% | |
| TGCGATAACAAGATAATCAT+AGG | + | chr4_4:37762450-37762469 | None:intergenic | 30.0% | |
| ! | TTTGTATTGGTCAAGTCTTT+CGG | + | chr4_4:37762507-37762526 | None:intergenic | 30.0% |
| CAACTGATCAAATATCAATC+AGG | - | chr4_4:37762583-37762602 | Msa0679670:CDS | 30.0% | |
| TGTGATTTCTGACAATATCA+AGG | + | chr4_4:37762635-37762654 | None:intergenic | 30.0% | |
| AAACCAAAAAACAACTGCAA+TGG | + | chr4_4:37762681-37762700 | None:intergenic | 30.0% | |
| TATAGAGAGTCTTGAAACAA+AGG | + | chr4_4:37762752-37762771 | None:intergenic | 30.0% | |
| TCTAGCAATTAATAGTATGG+TGG | + | chr4_4:37762803-37762822 | None:intergenic | 30.0% | |
| TGATTGTGTGAGATTATTGA+TGG | + | chr4_4:37762840-37762859 | None:intergenic | 30.0% | |
| ATAAAACCGAACTTGAAATC+CGG | - | chr4_4:37762932-37762951 | Msa0679670:intron | 30.0% | |
| ACAATTGCATTTGAGTAATG+AGG | - | chr4_4:37763080-37763099 | Msa0679670:intron | 30.0% | |
| AAAGTGACTATAGTGCATAA+AGG | - | chr4_4:37763226-37763245 | Msa0679670:intron | 30.0% | |
| ! | AATGTCTTTCTTGAAGCTTT+TGG | + | chr4_4:37763277-37763296 | None:intergenic | 30.0% |
| CATTAAAATGGCTTCAATCA+AGG | - | chr4_4:37763293-37763312 | Msa0679670:intron | 30.0% | |
| ! | GATGCACATTTTCTATGTAT+AGG | - | chr4_4:37763412-37763431 | Msa0679670:CDS | 30.0% |
| ! | TTTCTGAAAGATGATTTGGA+TGG | - | chr4_4:37763469-37763488 | Msa0679670:CDS | 30.0% |
| ATCACATTTGCATATGATTG+CGG | + | chr4_4:37764006-37764025 | None:intergenic | 30.0% | |
| GTGAAAATACTGAAAGTGAA+AGG | + | chr4_4:37764090-37764109 | None:intergenic | 30.0% | |
| TATCAATAGCTTCAGATTCT+TGG | + | chr4_4:37764212-37764231 | None:intergenic | 30.0% | |
| ! | AATCTGAAGCTATTGATAGA+AGG | - | chr4_4:37764214-37764233 | Msa0679670:intron | 30.0% |
| ACGTAAATTAGGTACTTACA+AGG | - | chr4_4:37764246-37764265 | Msa0679670:intron | 30.0% | |
| AGTGAAACAATAGATATTGG+TGG | + | chr4_4:37764277-37764296 | None:intergenic | 30.0% | |
| CCAAGTGAAACAATAGATAT+TGG | + | chr4_4:37764280-37764299 | None:intergenic | 30.0% | |
| CCAATATCTATTGTTTCACT+TGG | - | chr4_4:37764277-37764296 | Msa0679670:intron | 30.0% | |
| TTTCCTTTCATGACAATTGT+TGG | - | chr4_4:37764322-37764341 | Msa0679670:intron | 30.0% | |
| TTTGTTGGGAAAACAAGAAA+GGG | - | chr4_4:37764379-37764398 | Msa0679670:intron | 30.0% | |
| ATAGGTACATTGGAATTCAA+TGG | + | chr4_4:37764521-37764540 | None:intergenic | 30.0% | |
| AAAGTTGTGATTATAGGAGG+TGG | - | chr4_4:37761391-37761410 | Msa0679670:three_prime_UTR | 35.0% | |
| !!! | AGTTAAGGATGTTTTGGTCA+GGG | + | chr4_4:37761642-37761661 | None:intergenic | 35.0% |
| !!! | TAGTTAAGGATGTTTTGGTC+AGG | + | chr4_4:37761643-37761662 | None:intergenic | 35.0% |
| CCTGATGTCTATATATACAG+TGG | + | chr4_4:37761888-37761907 | None:intergenic | 35.0% | |
| CCACTGTATATATAGACATC+AGG | - | chr4_4:37761885-37761904 | Msa0679670:intron | 35.0% | |
| TTTAGAGGTCTTTGCAATTG+CGG | + | chr4_4:37762095-37762114 | None:intergenic | 35.0% | |
| TAAAACTGTATCGGAGACAT+TGG | - | chr4_4:37762145-37762164 | Msa0679670:intron | 35.0% | |
| !!! | AGGAGTATTTTGAGATTCCA+TGG | - | chr4_4:37762276-37762295 | Msa0679670:intron | 35.0% |
| !!! | GGAGTATTTTGAGATTCCAT+GGG | - | chr4_4:37762277-37762296 | Msa0679670:intron | 35.0% |
| TGATGGCACTTGATATAACA+AGG | + | chr4_4:37762382-37762401 | None:intergenic | 35.0% | |
| ! | GATTATCTTGTTATCGCAAC+TGG | - | chr4_4:37762452-37762471 | Msa0679670:CDS | 35.0% |
| GAAAGACTTGACCAATACAA+AGG | - | chr4_4:37762506-37762525 | Msa0679670:CDS | 35.0% | |
| ATTGCTTACCTCCTTTGTAT+TGG | + | chr4_4:37762520-37762539 | None:intergenic | 35.0% | |
| AGGTAAGCAATGATACTTAG+TGG | - | chr4_4:37762529-37762548 | Msa0679670:CDS | 35.0% | |
| ATACTTAGTGGTAACTCTCT+AGG | - | chr4_4:37762541-37762560 | Msa0679670:CDS | 35.0% | |
| ! | TGTGTGAGATTATTGATGGT+AGG | + | chr4_4:37762836-37762855 | None:intergenic | 35.0% |
| ATTGTTGGATTGAGATTGGA+CGG | + | chr4_4:37762959-37762978 | None:intergenic | 35.0% | |
| AGTGATTGTTGGATTGAGAT+TGG | + | chr4_4:37762963-37762982 | None:intergenic | 35.0% | |
| TTAAGCACATCAGTGATTGT+TGG | + | chr4_4:37762974-37762993 | None:intergenic | 35.0% | |
| ACTCCTTCACCAATGAAAAT+AGG | - | chr4_4:37763353-37763372 | Msa0679670:intron | 35.0% | |
| ! | TGTCCTATTTTCATTGGTGA+AGG | + | chr4_4:37763359-37763378 | None:intergenic | 35.0% |
| AGGACATATCAAACTTCAGT+TGG | - | chr4_4:37763373-37763392 | Msa0679670:intron | 35.0% | |
| ! | AAAGATGATTTGGATGGTCA+TGG | - | chr4_4:37763475-37763494 | Msa0679670:CDS | 35.0% |
| TTTCGCTATTGGAGACATTA+CGG | - | chr4_4:37763546-37763565 | Msa0679670:CDS | 35.0% | |
| !!! | AAGACAAATCGACTTGGTTT+TGG | + | chr4_4:37763591-37763610 | None:intergenic | 35.0% |
| TCAAATAGTGGCTATAGTAG+CGG | - | chr4_4:37763698-37763717 | Msa0679670:intron | 35.0% | |
| GATACGCTATTTAGCACAAA+TGG | - | chr4_4:37763747-37763766 | Msa0679670:intron | 35.0% | |
| GCGTTATAGCATCATATCAT+AGG | - | chr4_4:37763792-37763811 | Msa0679670:intron | 35.0% | |
| ! | AACTGATATTTTCCGCTATC+TGG | - | chr4_4:37763826-37763845 | Msa0679670:intron | 35.0% |
| ! | ACTGATATTTTCCGCTATCT+GGG | - | chr4_4:37763827-37763846 | Msa0679670:intron | 35.0% |
| TCACATTTGCATATGATTGC+GGG | + | chr4_4:37764005-37764024 | None:intergenic | 35.0% | |
| TGCAGTTAGCTATTGTCAAT+TGG | - | chr4_4:37764025-37764044 | Msa0679670:intron | 35.0% | |
| TGAAGCTATTGATAGAAGGA+GGG | - | chr4_4:37764218-37764237 | Msa0679670:intron | 35.0% | |
| GTTTCACTTGGAAGAAAACA+TGG | - | chr4_4:37764289-37764308 | Msa0679670:intron | 35.0% | |
| CTTCCAACAATTGTCATGAA+AGG | + | chr4_4:37764328-37764347 | None:intergenic | 35.0% | |
| CTTTCATGACAATTGTTGGA+AGG | - | chr4_4:37764326-37764345 | Msa0679670:intron | 35.0% | |
| ! | AAGTCTGGAGATTTGTTTGT+TGG | - | chr4_4:37764364-37764383 | Msa0679670:intron | 35.0% |
| ! | AGTCTGGAGATTTGTTTGTT+GGG | - | chr4_4:37764365-37764384 | Msa0679670:intron | 35.0% |
| ! | GTTTGTTGGGAAAACAAGAA+AGG | - | chr4_4:37764378-37764397 | Msa0679670:intron | 35.0% |
| AGAAAGAAAGAGAGAGCTCA+CGG | + | chr4_4:37761478-37761497 | None:intergenic | 40.0% | |
| !!! | GTTAAGGATGTTTTGGTCAG+GGG | + | chr4_4:37761641-37761660 | None:intergenic | 40.0% |
| TAGAATCGTGATGTGTGACT+AGG | + | chr4_4:37761927-37761946 | None:intergenic | 40.0% | |
| GAAGACTGTATTCGACAACA+CGG | + | chr4_4:37761964-37761983 | None:intergenic | 40.0% | |
| CAGTTTCATTACGATGCTGA+TGG | - | chr4_4:37761986-37762005 | Msa0679670:intron | 40.0% | |
| GGTCCACAACCACAATATAA+AGG | + | chr4_4:37762119-37762138 | None:intergenic | 40.0% | |
| TTGATGTCTGATCATAGTCG+TGG | - | chr4_4:37762172-37762191 | Msa0679670:intron | 40.0% | |
| !! | AAGAGTTGATGAACACAGGA+AGG | - | chr4_4:37762256-37762275 | Msa0679670:intron | 40.0% |
| GATTACTGTCCTTTCTGCAA+AGG | + | chr4_4:37762330-37762349 | None:intergenic | 40.0% | |
| TGTTATCGCAACTGGTCATA+CGG | - | chr4_4:37762460-37762479 | Msa0679670:CDS | 40.0% | |
| !!! | AGTCTTTCGGTCCTTGTTTT+GGG | + | chr4_4:37762494-37762513 | None:intergenic | 40.0% |
| !! | AAGTCTTTCGGTCCTTGTTT+TGG | + | chr4_4:37762495-37762514 | None:intergenic | 40.0% |
| AGACTTGACCAATACAAAGG+AGG | - | chr4_4:37762509-37762528 | Msa0679670:CDS | 40.0% | |
| CCAAAAAACAACTGCAATGG+AGG | + | chr4_4:37762678-37762697 | None:intergenic | 40.0% | |
| !!! | CCTCCATTGCAGTTGTTTTT+TGG | - | chr4_4:37762675-37762694 | Msa0679670:CDS | 40.0% |
| ATCTCACACAATCAGCACAA+TGG | - | chr4_4:37762846-37762865 | Msa0679670:intron | 40.0% | |
| ACAGTTCAATCTCGAGCAAA+CGG | + | chr4_4:37762875-37762894 | None:intergenic | 40.0% | |
| !!! | GCACGTTCAGTTTTGATTGT+CGG | - | chr4_4:37763145-37763164 | Msa0679670:intron | 40.0% |
| !!! | CACGTTCAGTTTTGATTGTC+GGG | - | chr4_4:37763146-37763165 | Msa0679670:intron | 40.0% |
| !!! | ACGTTCAGTTTTGATTGTCG+GGG | - | chr4_4:37763147-37763166 | Msa0679670:intron | 40.0% |
| ! | ATGATTTGGATGGTCATGGA+AGG | - | chr4_4:37763479-37763498 | Msa0679670:CDS | 40.0% |
| CTCTCAAGTGTTCATCAACT+TGG | + | chr4_4:37763507-37763526 | None:intergenic | 40.0% | |
| TGATGAACACTTGAGAGTGA+AGG | - | chr4_4:37763510-37763529 | Msa0679670:CDS | 40.0% | |
| GATGAACACTTGAGAGTGAA+GGG | - | chr4_4:37763511-37763530 | Msa0679670:CDS | 40.0% | |
| ! | AGGAACAACGTTTTCGCTAT+TGG | - | chr4_4:37763535-37763554 | Msa0679670:CDS | 40.0% |
| CACTATTTGACAACACTGCA+TGG | + | chr4_4:37763688-37763707 | None:intergenic | 40.0% | |
| CATGCAGTGTTGTCAAATAG+TGG | - | chr4_4:37763686-37763705 | Msa0679670:intron | 40.0% | |
| TTGTGCTAAATAGCGTATCG+CGG | + | chr4_4:37763746-37763765 | None:intergenic | 40.0% | |
| TGATGCTATAACGCTGCTAA+AGG | + | chr4_4:37763786-37763805 | None:intergenic | 40.0% | |
| ! | AAACAAGGAGTGTATGCACA+AGG | - | chr4_4:37764169-37764188 | Msa0679670:intron | 40.0% |
| CTGAAGCTATTGATAGAAGG+AGG | - | chr4_4:37764217-37764236 | Msa0679670:intron | 40.0% | |
| GGAGGGAAAGAACGTAAATT+AGG | - | chr4_4:37764235-37764254 | Msa0679670:intron | 40.0% | |
| GGGAAAACAAGAAAGGGATT+AGG | - | chr4_4:37764385-37764404 | Msa0679670:intron | 40.0% | |
| !! | ATTATAGGAGGTGGTGTTGC+TGG | - | chr4_4:37761400-37761419 | Msa0679670:three_prime_UTR | 45.0% |
| !!! | ATGTTTTGGTCAGGGGAACT+CGG | + | chr4_4:37761634-37761653 | None:intergenic | 45.0% |
| TAGTAATCCAGAGTTCGGTC+AGG | + | chr4_4:37761680-37761699 | None:intergenic | 45.0% | |
| AGATTCCATGGGCAAGTTTG+AGG | - | chr4_4:37762288-37762307 | Msa0679670:intron | 45.0% | |
| GATTCCATGGGCAAGTTTGA+GGG | - | chr4_4:37762289-37762308 | Msa0679670:intron | 45.0% | |
| ACTGTCCTTTCTGCAAAGGA+TGG | + | chr4_4:37762326-37762345 | None:intergenic | 45.0% | |
| ! | TCTGAAGTCTTCACTGCTGA+TGG | - | chr4_4:37762413-37762432 | Msa0679670:CDS | 45.0% |
| CGGAATCTATCCCCAAAACA+AGG | - | chr4_4:37762480-37762499 | Msa0679670:CDS | 45.0% | |
| !!! | GTCTTTCGGTCCTTGTTTTG+GGG | + | chr4_4:37762493-37762512 | None:intergenic | 45.0% |
| CGATCTTGATTGCAGCATCA+AGG | + | chr4_4:37762719-37762738 | None:intergenic | 45.0% | |
| TCACACAATCAGCACAATGG+TGG | - | chr4_4:37762849-37762868 | Msa0679670:intron | 45.0% | |
| !!! | CGTTCAGTTTTGATTGTCGG+GGG | - | chr4_4:37763148-37763167 | Msa0679670:intron | 45.0% |
| GGAAACCACTTTCTACAGCA+TGG | - | chr4_4:37763434-37763453 | Msa0679670:CDS | 45.0% | |
| AACACTTGAGAGTGAAGGGA+AGG | - | chr4_4:37763515-37763534 | Msa0679670:CDS | 45.0% | |
| !! | ACGCTGCTAAAGGTACTATC+TGG | + | chr4_4:37763776-37763795 | None:intergenic | 45.0% |
| ACAATTGTTGGAAGGCTTCC+TGG | - | chr4_4:37764334-37764353 | Msa0679670:intron | 45.0% | |
| CTTCCTGGTATGATCAAGTC+TGG | - | chr4_4:37764349-37764368 | Msa0679670:intron | 45.0% | |
| TCTCCAGACTTGATCATACC+AGG | + | chr4_4:37764355-37764374 | None:intergenic | 45.0% | |
| CTTATCTCCTGACCGAACTC+TGG | - | chr4_4:37761670-37761689 | Msa0679670:CDS | 50.0% | |
| ATTGCCCTCAAACTTGCCCA+TGG | + | chr4_4:37762296-37762315 | None:intergenic | 50.0% | |
| ATGGGCAAGTTTGAGGGCAA+TGG | - | chr4_4:37762295-37762314 | Msa0679670:intron | 50.0% | |
| TGGAGCCATCCTTTGCAGAA+AGG | - | chr4_4:37762318-37762337 | Msa0679670:intron | 50.0% | |
| TCAATCAGGGTTTCAAGCCG+TGG | - | chr4_4:37762597-37762616 | Msa0679670:CDS | 50.0% | |
| !! | GACGGTCCGGATTTCAAGTT+CGG | + | chr4_4:37762941-37762960 | None:intergenic | 50.0% |
| TGGATTGAGATTGGACGGTC+CGG | + | chr4_4:37762954-37762973 | None:intergenic | 50.0% | |
| !!! | TCAGTTTTGATTGTCGGGGG+AGG | - | chr4_4:37763151-37763170 | Msa0679670:intron | 50.0% |
| CCTAGCCATGCTGTAGAAAG+TGG | + | chr4_4:37763442-37763461 | None:intergenic | 50.0% | |
| CCACTTTCTACAGCATGGCT+AGG | - | chr4_4:37763439-37763458 | Msa0679670:CDS | 50.0% | |
| GACAGGTCAATCCCAGATAG+CGG | + | chr4_4:37763841-37763860 | None:intergenic | 50.0% | |
| GGCAAGTTTGAGGGCAATGG+TGG | - | chr4_4:37762298-37762317 | Msa0679670:intron | 55.0% | |
| CAAGGATCGCTACACGACCA+CGG | + | chr4_4:37762617-37762636 | None:intergenic | 55.0% | |
| CGAGCTAGCAGCAGAGATTG+CGG | - | chr4_4:37763186-37763205 | Msa0679670:intron | 55.0% | |
| ATTGTCGGGGGAGGTCCAAC+AGG | - | chr4_4:37763160-37763179 | Msa0679670:intron | 60.0% | |
| GCTGCTAGCTCGACACCTGT+TGG | + | chr4_4:37763178-37763197 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 37761317 | 37764588 | 37761317 | ID=Msa0679670;Name=Msa0679670 |
| chr4_4 | mRNA | 37761317 | 37764588 | 37761317 | ID=Msa0679670-mRNA-1;Parent=Msa0679670;Name=Msa0679670-mRNA-1;_AED=0.05;_eAED=0.05;_QI=62|1|1|1|1|1|4|153|359 |
| chr4_4 | exon | 37761317 | 37761742 | 37761317 | ID=Msa0679670-mRNA-1:exon:8868;Parent=Msa0679670-mRNA-1 |
| chr4_4 | exon | 37762329 | 37762780 | 37762329 | ID=Msa0679670-mRNA-1:exon:8867;Parent=Msa0679670-mRNA-1 |
| chr4_4 | exon | 37763375 | 37763631 | 37763375 | ID=Msa0679670-mRNA-1:exon:8866;Parent=Msa0679670-mRNA-1 |
| chr4_4 | exon | 37764429 | 37764588 | 37764429 | ID=Msa0679670-mRNA-1:exon:8865;Parent=Msa0679670-mRNA-1 |
| chr4_4 | five_prime_UTR | 37764527 | 37764588 | 37764527 | ID=Msa0679670-mRNA-1:five_prime_utr;Parent=Msa0679670-mRNA-1 |
| chr4_4 | CDS | 37764429 | 37764526 | 37764429 | ID=Msa0679670-mRNA-1:cds;Parent=Msa0679670-mRNA-1 |
| chr4_4 | CDS | 37763375 | 37763631 | 37763375 | ID=Msa0679670-mRNA-1:cds;Parent=Msa0679670-mRNA-1 |
| chr4_4 | CDS | 37762329 | 37762780 | 37762329 | ID=Msa0679670-mRNA-1:cds;Parent=Msa0679670-mRNA-1 |
| chr4_4 | CDS | 37761470 | 37761742 | 37761470 | ID=Msa0679670-mRNA-1:cds;Parent=Msa0679670-mRNA-1 |
| chr4_4 | three_prime_UTR | 37761317 | 37761469 | 37761317 | ID=Msa0679670-mRNA-1:three_prime_utr;Parent=Msa0679670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
