Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0783210 | sp|Q67UF5|PDI23_ORYSJ | 79.286 | 420 | 80 | 2 | 22 | 435 | 23 | 441 | 0.0 | 689 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0783210 | G7KH66 | 98.851 | 435 | 5 | 0 | 1 | 435 | 1 | 435 | 0.0 | 882 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0035120 | Msa0783210 | 0.801639 | 8.189234e-49 | -8.615850e-47 |
Msa0057890 | Msa0783210 | 0.824025 | 1.009297e-53 | -8.615850e-47 |
Msa0081520 | Msa0783210 | 0.814939 | 1.193500e-51 | -8.615850e-47 |
Msa0626450 | Msa0783210 | 0.813289 | 2.759569e-51 | -8.615850e-47 |
Msa0626490 | Msa0783210 | 0.809301 | 2.025068e-50 | -8.615850e-47 |
Msa0664600 | Msa0783210 | 0.813867 | 2.059040e-51 | -8.615850e-47 |
Msa0772710 | Msa0783210 | 0.804509 | 2.088052e-49 | -8.615850e-47 |
Msa0783210 | Msa0795870 | 0.804257 | 2.355692e-49 | -8.615850e-47 |
Msa0783210 | Msa1127590 | 0.802225 | 6.206419e-49 | -8.615850e-47 |
Msa0783210 | Msa1132840 | 0.805059 | 1.602349e-49 | -8.615850e-47 |
Msa0783210 | Msa1199570 | 0.800541 | 1.373172e-48 | -8.615850e-47 |
Msa0783210 | Msa1276660 | 0.808409 | 3.141676e-50 | -8.615850e-47 |
Msa0783210 | Msa1356830 | 0.806400 | 8.380650e-50 | -8.615850e-47 |
Msa0783210 | Msa1437940 | 0.801613 | 8.289522e-49 | -8.615850e-47 |
Msa0783210 | Msa1440960 | 0.801253 | 9.826200e-49 | -8.615850e-47 |
Msa0173890 | Msa0783210 | 0.810590 | 1.068610e-50 | -8.615850e-47 |
Msa0545340 | Msa0783210 | 0.802256 | 6.114423e-49 | -8.615850e-47 |
Msa0580370 | Msa0783210 | 0.800108 | 1.682582e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0783210 | MtrunA17_Chr5g0438731 | 98.624 | 436 | 5 | 1 | 1 | 435 | 32 | 467 | 0.0 | 879 |
Msa0783210 | MtrunA17_Chr2g0287471 | 84.962 | 133 | 20 | 0 | 1 | 133 | 1 | 133 | 4.50e-73 | 233 |
Msa0783210 | MtrunA17_Chr2g0287471 | 44.037 | 109 | 60 | 1 | 156 | 264 | 26 | 133 | 1.64e-23 | 100 |
Msa0783210 | MtrunA17_Chr7g0271721 | 34.074 | 270 | 152 | 8 | 1 | 267 | 3 | 249 | 8.46e-40 | 146 |
Msa0783210 | MtrunA17_Chr7g0271721 | 42.308 | 130 | 67 | 4 | 157 | 280 | 23 | 150 | 2.05e-21 | 95.1 |
Msa0783210 | MtrunA17_Chr1g0194961 | 35.000 | 240 | 136 | 5 | 33 | 267 | 34 | 258 | 1.04e-39 | 146 |
Msa0783210 | MtrunA17_Chr1g0194961 | 40.541 | 148 | 70 | 4 | 28 | 172 | 147 | 279 | 1.67e-24 | 103 |
Msa0783210 | MtrunA17_Chr1g0194961 | 40.625 | 128 | 68 | 4 | 163 | 284 | 34 | 159 | 2.21e-19 | 89.4 |
Msa0783210 | MtrunA17_Chr1g0200731 | 40.351 | 114 | 59 | 4 | 30 | 136 | 95 | 206 | 9.02e-17 | 82.4 |
Msa0783210 | MtrunA17_Chr1g0200731 | 28.700 | 223 | 135 | 5 | 163 | 382 | 98 | 299 | 7.76e-15 | 76.3 |
Msa0783210 | MtrunA17_Chr3g0124851 | 34.884 | 172 | 93 | 7 | 163 | 329 | 38 | 195 | 1.18e-16 | 82.0 |
Msa0783210 | MtrunA17_Chr3g0124851 | 41.284 | 109 | 57 | 4 | 30 | 132 | 35 | 142 | 1.29e-16 | 82.0 |
Msa0783210 | MtrunA17_Chr3g0124851 | 33.333 | 105 | 68 | 1 | 26 | 128 | 375 | 479 | 7.96e-12 | 67.0 |
Msa0783210 | MtrunA17_Chr2g0326581 | 41.600 | 125 | 65 | 4 | 135 | 256 | 55 | 174 | 1.27e-14 | 75.9 |
Msa0783210 | MtrunA17_Chr2g0326581 | 51.220 | 82 | 38 | 2 | 30 | 110 | 80 | 160 | 2.92e-13 | 71.6 |
Msa0783210 | MtrunA17_Chr2g0326581 | 27.184 | 206 | 132 | 6 | 64 | 259 | 322 | 519 | 1.12e-11 | 66.6 |
Msa0783210 | MtrunA17_Chr2g0326581 | 32.609 | 138 | 87 | 3 | 36 | 169 | 424 | 559 | 1.30e-11 | 66.6 |
Msa0783210 | MtrunA17_Chr8g0360031 | 41.463 | 82 | 48 | 0 | 30 | 111 | 73 | 154 | 2.22e-14 | 71.2 |
Msa0783210 | MtrunA17_Chr8g0360031 | 25.654 | 191 | 122 | 6 | 72 | 259 | 2 | 175 | 6.39e-13 | 67.0 |
Msa0783210 | MtrunA17_Chr2g0317731 | 26.846 | 149 | 99 | 2 | 107 | 245 | 9 | 157 | 6.21e-14 | 69.7 |
Msa0783210 | MtrunA17_Chr2g0317731 | 34.653 | 101 | 66 | 0 | 11 | 111 | 51 | 151 | 2.56e-13 | 67.8 |
Msa0783210 | MtrunA17_Chr2g0326241 | 28.814 | 118 | 81 | 2 | 17 | 132 | 29 | 145 | 9.35e-14 | 68.9 |
Msa0783210 | MtrunA17_Chr2g0326241 | 28.333 | 120 | 83 | 2 | 156 | 273 | 37 | 155 | 3.83e-12 | 64.3 |
Msa0783210 | MtrunA17_Chr1g0211871 | 34.483 | 116 | 72 | 2 | 24 | 138 | 64 | 176 | 1.13e-13 | 69.3 |
Msa0783210 | MtrunA17_Chr1g0211871 | 30.631 | 111 | 73 | 1 | 153 | 263 | 63 | 169 | 5.39e-13 | 67.4 |
Msa0783210 | MtrunA17_Chr1g0201781 | 32.558 | 86 | 58 | 0 | 34 | 119 | 66 | 151 | 5.24e-13 | 67.0 |
Msa0783210 | MtrunA17_Chr1g0201781 | 29.808 | 104 | 66 | 3 | 166 | 268 | 68 | 165 | 2.07e-11 | 62.4 |
Msa0783210 | MtrunA17_Chr4g0029181 | 48.421 | 95 | 40 | 5 | 30 | 120 | 102 | 191 | 1.16e-12 | 69.7 |
Msa0783210 | MtrunA17_Chr2g0317721 | 34.513 | 113 | 68 | 1 | 5 | 111 | 10 | 122 | 4.14e-12 | 63.5 |
Msa0783210 | MtrunA17_Chr3g0125821 | 35.632 | 87 | 56 | 0 | 33 | 119 | 73 | 159 | 7.45e-12 | 63.9 |
Msa0783210 | MtrunA17_Chr2g0317711 | 33.628 | 113 | 69 | 1 | 5 | 111 | 10 | 122 | 1.29e-11 | 62.4 |
Msa0783210 | MtrunA17_Chr4g0041801 | 32.967 | 91 | 52 | 2 | 160 | 242 | 143 | 232 | 1.63e-11 | 65.9 |
Msa0783210 | MtrunA17_Chr4g0044731 | 36.905 | 84 | 50 | 1 | 31 | 111 | 63 | 146 | 4.51e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0783210 | AT1G04980.1 | 72.748 | 444 | 111 | 4 | 1 | 435 | 5 | 447 | 0.0 | 680 |
Msa0783210 | AT2G32920.1 | 74.178 | 426 | 105 | 4 | 14 | 435 | 16 | 440 | 0.0 | 656 |
Msa0783210 | AT2G47470.2 | 36.250 | 240 | 133 | 5 | 33 | 267 | 28 | 252 | 4.78e-44 | 155 |
Msa0783210 | AT2G47470.2 | 54.369 | 103 | 42 | 3 | 30 | 128 | 143 | 244 | 1.59e-27 | 110 |
Msa0783210 | AT2G47470.2 | 39.370 | 127 | 71 | 3 | 163 | 284 | 28 | 153 | 1.17e-19 | 89.0 |
Msa0783210 | AT2G47470.4 | 36.250 | 240 | 133 | 5 | 33 | 267 | 28 | 252 | 1.10e-43 | 156 |
Msa0783210 | AT2G47470.4 | 54.369 | 103 | 42 | 3 | 30 | 128 | 143 | 244 | 1.76e-27 | 112 |
Msa0783210 | AT2G47470.4 | 39.370 | 127 | 71 | 3 | 163 | 284 | 28 | 153 | 2.61e-19 | 89.0 |
Msa0783210 | AT2G47470.3 | 36.250 | 240 | 133 | 5 | 33 | 267 | 28 | 252 | 1.17e-43 | 155 |
Msa0783210 | AT2G47470.3 | 54.369 | 103 | 42 | 3 | 30 | 128 | 143 | 244 | 1.64e-27 | 112 |
Msa0783210 | AT2G47470.3 | 39.370 | 127 | 71 | 3 | 163 | 284 | 28 | 153 | 2.78e-19 | 88.6 |
Msa0783210 | AT2G47470.1 | 36.250 | 240 | 133 | 5 | 33 | 267 | 28 | 252 | 1.56e-43 | 156 |
Msa0783210 | AT2G47470.1 | 54.369 | 103 | 42 | 3 | 30 | 128 | 143 | 244 | 1.88e-27 | 112 |
Msa0783210 | AT2G47470.1 | 39.370 | 127 | 71 | 3 | 163 | 284 | 28 | 153 | 3.05e-19 | 89.4 |
Msa0783210 | AT3G54960.2 | 46.154 | 91 | 48 | 1 | 30 | 120 | 101 | 190 | 1.09e-18 | 88.6 |
Msa0783210 | AT3G54960.2 | 28.182 | 220 | 136 | 6 | 163 | 380 | 104 | 303 | 2.64e-15 | 78.2 |
Msa0783210 | AT3G54960.1 | 46.154 | 91 | 48 | 1 | 30 | 120 | 101 | 190 | 1.45e-18 | 88.6 |
Msa0783210 | AT3G54960.1 | 28.182 | 220 | 136 | 6 | 163 | 380 | 104 | 303 | 3.38e-15 | 78.2 |
Msa0783210 | AT3G54960.1 | 37.363 | 91 | 49 | 2 | 36 | 126 | 445 | 527 | 3.59e-11 | 65.5 |
Msa0783210 | AT5G60640.1 | 36.493 | 211 | 111 | 10 | 30 | 226 | 105 | 306 | 2.38e-17 | 84.7 |
Msa0783210 | AT5G60640.1 | 42.424 | 99 | 49 | 4 | 161 | 256 | 106 | 199 | 4.34e-15 | 77.8 |
Msa0783210 | AT5G60640.1 | 26.733 | 202 | 130 | 5 | 68 | 259 | 351 | 544 | 5.95e-12 | 68.2 |
Msa0783210 | AT5G60640.2 | 36.493 | 211 | 111 | 10 | 30 | 226 | 105 | 306 | 2.82e-17 | 84.3 |
Msa0783210 | AT5G60640.2 | 42.424 | 99 | 49 | 4 | 161 | 256 | 106 | 199 | 5.61e-15 | 77.4 |
Msa0783210 | AT5G60640.2 | 26.633 | 199 | 129 | 5 | 62 | 252 | 346 | 535 | 2.67e-11 | 65.9 |
Msa0783210 | AT5G60640.3 | 36.493 | 211 | 111 | 10 | 30 | 226 | 105 | 306 | 2.98e-17 | 84.3 |
Msa0783210 | AT5G60640.3 | 42.424 | 99 | 49 | 4 | 161 | 256 | 106 | 199 | 3.47e-15 | 78.2 |
Msa0783210 | AT5G60640.3 | 34.737 | 95 | 60 | 1 | 167 | 259 | 386 | 480 | 3.88e-11 | 65.5 |
Msa0783210 | AT1G21750.2 | 40.367 | 109 | 58 | 4 | 30 | 132 | 32 | 139 | 3.87e-17 | 84.0 |
Msa0783210 | AT1G21750.2 | 35.849 | 106 | 62 | 3 | 163 | 263 | 35 | 139 | 9.38e-15 | 76.6 |
Msa0783210 | AT1G21750.2 | 37.113 | 97 | 59 | 1 | 26 | 120 | 372 | 468 | 1.14e-12 | 70.1 |
Msa0783210 | AT1G21750.1 | 40.367 | 109 | 58 | 4 | 30 | 132 | 32 | 139 | 4.04e-17 | 84.0 |
Msa0783210 | AT1G21750.1 | 29.518 | 166 | 99 | 5 | 163 | 323 | 35 | 187 | 1.03e-14 | 76.6 |
Msa0783210 | AT1G21750.1 | 37.113 | 97 | 59 | 1 | 26 | 120 | 372 | 468 | 1.03e-12 | 70.1 |
Msa0783210 | AT1G21750.1 | 35.577 | 104 | 64 | 2 | 165 | 266 | 381 | 483 | 3.17e-11 | 65.5 |
Msa0783210 | AT1G77510.1 | 28.421 | 190 | 117 | 6 | 152 | 336 | 23 | 198 | 1.35e-16 | 82.4 |
Msa0783210 | AT1G77510.1 | 39.450 | 109 | 59 | 4 | 30 | 132 | 31 | 138 | 3.02e-16 | 81.3 |
Msa0783210 | AT1G77510.1 | 27.165 | 254 | 157 | 11 | 14 | 252 | 227 | 467 | 5.40e-11 | 65.1 |
Msa0783210 | AT1G07960.4 | 30.000 | 120 | 81 | 2 | 28 | 144 | 25 | 144 | 1.61e-14 | 71.2 |
Msa0783210 | AT1G07960.4 | 25.439 | 114 | 82 | 2 | 154 | 265 | 21 | 133 | 8.70e-14 | 68.9 |
Msa0783210 | AT1G07960.3 | 30.000 | 120 | 81 | 2 | 28 | 144 | 25 | 144 | 1.61e-14 | 71.2 |
Msa0783210 | AT1G07960.3 | 25.439 | 114 | 82 | 2 | 154 | 265 | 21 | 133 | 8.70e-14 | 68.9 |
Msa0783210 | AT1G07960.1 | 30.000 | 120 | 81 | 2 | 28 | 144 | 25 | 144 | 1.61e-14 | 71.2 |
Msa0783210 | AT1G07960.1 | 25.439 | 114 | 82 | 2 | 154 | 265 | 21 | 133 | 8.70e-14 | 68.9 |
Msa0783210 | AT1G07960.2 | 30.000 | 120 | 81 | 2 | 28 | 144 | 25 | 144 | 1.61e-14 | 71.2 |
Msa0783210 | AT1G07960.2 | 25.439 | 114 | 82 | 2 | 154 | 265 | 21 | 133 | 8.70e-14 | 68.9 |
Msa0783210 | AT1G35620.1 | 40.426 | 94 | 51 | 3 | 30 | 120 | 34 | 125 | 2.30e-14 | 75.1 |
Msa0783210 | AT1G35620.1 | 27.966 | 236 | 138 | 10 | 155 | 383 | 29 | 239 | 9.00e-14 | 73.2 |
Msa0783210 | AT1G43560.1 | 37.209 | 86 | 54 | 0 | 34 | 119 | 64 | 149 | 1.62e-13 | 68.9 |
Msa0783210 | AT1G76760.1 | 31.429 | 105 | 68 | 1 | 34 | 138 | 69 | 169 | 2.02e-13 | 68.6 |
Msa0783210 | AT4G03520.1 | 36.082 | 97 | 59 | 2 | 151 | 245 | 74 | 169 | 3.61e-12 | 65.5 |
Msa0783210 | AT1G50320.1 | 30.000 | 150 | 89 | 4 | 121 | 263 | 30 | 170 | 3.83e-12 | 65.1 |
Msa0783210 | AT3G15360.1 | 36.667 | 90 | 57 | 0 | 30 | 119 | 88 | 177 | 4.97e-12 | 65.1 |
Msa0783210 | AT4G27080.1 | 32.000 | 125 | 67 | 4 | 126 | 242 | 118 | 232 | 2.33e-11 | 65.9 |
Msa0783210 | AT4G27080.2 | 32.000 | 125 | 67 | 4 | 126 | 242 | 170 | 284 | 2.84e-11 | 65.9 |
Msa0783210 | AT1G03680.1 | 26.923 | 156 | 94 | 4 | 110 | 245 | 8 | 163 | 2.94e-11 | 62.4 |
Msa0783210 | AT3G20560.1 | 34.000 | 100 | 57 | 2 | 151 | 242 | 134 | 232 | 9.43e-11 | 63.9 |
Find 150 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACCTTCCCTTTCAAATTAT+TGG | 0.071140 | 5_2:+67050847 | None:intergenic |
TTCAATCAATTGTTCATTAA+TGG | 0.149709 | 5_2:+67048988 | None:intergenic |
TTCCCAACAATCTTGGTATT+TGG | 0.173156 | 5_2:-67050430 | Msa0783210:CDS |
CTTAATTCCTTTCAGGAATA+TGG | 0.176621 | 5_2:-67051633 | Msa0783210:intron |
TTTGAAAGGGAAGGTTAAAT+TGG | 0.182097 | 5_2:-67050840 | Msa0783210:CDS |
TTCCTTCCTTCCCGACATTT+TGG | 0.184244 | 5_2:-67050150 | Msa0783210:CDS |
TACGAGAAGACCTGGTTCTT+TGG | 0.276020 | 5_2:-67048959 | Msa0783210:three_prime_UTR |
GATAGTATGTAGAATATTAA+AGG | 0.283108 | 5_2:-67049181 | Msa0783210:three_prime_UTR |
CTCTAGTAACTTCGATGAAT+TGG | 0.285509 | 5_2:-67051074 | Msa0783210:CDS |
GAAGGCAGCCACTGTGTTAA+AGG | 0.292239 | 5_2:-67052609 | Msa0783210:CDS |
CTATATAGCTCTGTCACTTC+TGG | 0.297987 | 5_2:+67050310 | None:intergenic |
TCAATCAATTGTTCATTAAT+GGG | 0.300305 | 5_2:+67048989 | None:intergenic |
GTTTCCTTATAGTTCATCTT+TGG | 0.305542 | 5_2:+67049265 | None:intergenic |
TTTCAGGAATATGGTATTAG+AGG | 0.309619 | 5_2:-67051624 | Msa0783210:intron |
GTAAGGCTCTGACTCCTATA+TGG | 0.316417 | 5_2:-67052634 | Msa0783210:CDS |
AATTTATATAGACTCGTAAA+TGG | 0.356732 | 5_2:+67048662 | None:intergenic |
CTCAAGGTCTGGCTGCTTAC+CGG | 0.356762 | 5_2:+67049645 | None:intergenic |
TGCCGAATTCGCACTTCAAC+AGG | 0.358905 | 5_2:-67051526 | Msa0783210:intron |
AACCTGTTGAAGTGCGAATT+CGG | 0.359545 | 5_2:+67051524 | None:intergenic |
GCTCGAACGTTGCATTATAA+AGG | 0.362690 | 5_2:+67048787 | None:intergenic |
GGCAATTGGTTTAACATCTC+TGG | 0.362839 | 5_2:+67051545 | None:intergenic |
GCAAAAGGGGCTTAGATATA+GGG | 0.370495 | 5_2:+67048628 | None:intergenic |
TAGAGGATTTCCAACTATAA+AGG | 0.370686 | 5_2:-67051607 | Msa0783210:CDS |
GTGGCTTGAAACTCGTATTA+AGG | 0.371667 | 5_2:-67048845 | Msa0783210:three_prime_UTR |
AACACCTTTCTTAACGTTCA+AGG | 0.373568 | 5_2:+67049579 | None:intergenic |
TGCAAAAGGGGCTTAGATAT+AGG | 0.373607 | 5_2:+67048627 | None:intergenic |
CTCGAACGTTGCATTATAAA+GGG | 0.386422 | 5_2:+67048788 | None:intergenic |
TCAACCAAAGATGAACTATA+AGG | 0.387123 | 5_2:-67049269 | Msa0783210:exon |
AAAGTTGGTGTTGGTGGGTA+TGG | 0.390826 | 5_2:-67049619 | Msa0783210:CDS |
CAACGTTCGAGCTATGTTTA+CGG | 0.396118 | 5_2:-67048776 | Msa0783210:three_prime_UTR |
GGGTCTTGAACAGCTATGTA+TGG | 0.397598 | 5_2:-67049675 | Msa0783210:intron |
CTAGCACCCTCGTAAGGAAT+TGG | 0.409040 | 5_2:+67050391 | None:intergenic |
CATCTCCTATAGCATAAAAC+TGG | 0.409206 | 5_2:+67049203 | None:intergenic |
TTGAAAGGGAAGGTTAAATT+GGG | 0.412336 | 5_2:-67050839 | Msa0783210:CDS |
TCAAGGATTCCCAACAATCT+TGG | 0.416145 | 5_2:-67050437 | Msa0783210:CDS |
TCCATGGTGCGGGCACTGTA+AGG | 0.416505 | 5_2:-67052651 | Msa0783210:CDS |
ACCTTGGACTTGAAGTTGTT+AGG | 0.419712 | 5_2:+67054101 | None:intergenic |
TTGTTGAATTCTTTGCTCCA+TGG | 0.424265 | 5_2:-67052667 | Msa0783210:CDS |
TGCTGATGCTCACCAATCTC+TGG | 0.427343 | 5_2:-67052561 | Msa0783210:CDS |
AGTTCAAAAGGAGTCCTTAC+AGG | 0.430959 | 5_2:-67050070 | Msa0783210:intron |
CTGGCTCCTTGGTAATCAAC+TGG | 0.433932 | 5_2:+67051564 | None:intergenic |
AGGAATTGGAGTATCTTTAT+CGG | 0.435399 | 5_2:+67050405 | None:intergenic |
AGAAACCACCGCTTCTTCTT+CGG | 0.438238 | 5_2:-67051107 | Msa0783210:CDS |
TCTGTTTCTCCCCTCCGCCT+TGG | 0.439079 | 5_2:+67050124 | None:intergenic |
AGAGAATTTGTGAAAGAAGC+TGG | 0.439854 | 5_2:-67049428 | Msa0783210:CDS |
GTGTTGTCTATAGGATGTTT+TGG | 0.440808 | 5_2:-67050207 | Msa0783210:intron |
TGAAGTGCGAATTCGGCAAT+TGG | 0.441042 | 5_2:+67051531 | None:intergenic |
TTATCAAAAGCAAAGAACTT+TGG | 0.443575 | 5_2:-67051051 | Msa0783210:CDS |
TTTGTCAGTCTCTAATGAGC+AGG | 0.447245 | 5_2:-67050468 | Msa0783210:intron |
GGTGCAAACACCTTTATAGT+TGG | 0.448420 | 5_2:+67051597 | None:intergenic |
CCAACTTTCTGCTCAAGGTC+TGG | 0.450805 | 5_2:+67049634 | None:intergenic |
AACCGTAGAGAGCGTGAGAA+AGG | 0.451953 | 5_2:+67054150 | None:intergenic |
TGCTCACCAATCTCTGGCTC+AGG | 0.454025 | 5_2:-67052555 | Msa0783210:intron |
GTTTAACATCTCTGGCTCCT+TGG | 0.454708 | 5_2:+67051553 | None:intergenic |
TGTTGAATGTTGCACACAAC+CGG | 0.455377 | 5_2:+67048915 | None:intergenic |
ATGAGCAGGTTCAATGTTCA+AGG | 0.456443 | 5_2:-67050454 | Msa0783210:CDS |
AATTCTTTGCTCCATGGTGC+GGG | 0.458259 | 5_2:-67052661 | Msa0783210:CDS |
GAATCTGCGAGTGATGAAAA+TGG | 0.461683 | 5_2:+67054250 | None:intergenic |
ATCATTCGCACTAGAGCAGC+TGG | 0.462465 | 5_2:-67050350 | Msa0783210:CDS |
TTATAGTTCATCTTTGGTTG+AGG | 0.465932 | 5_2:+67049271 | None:intergenic |
TGACAGGTTCTGAATTCAAA+TGG | 0.467668 | 5_2:-67052698 | Msa0783210:intron |
CTCCAAATACCAAGATTGTT+GGG | 0.472339 | 5_2:+67050428 | None:intergenic |
GGAAAACCTGAGCCAGAGAT+TGG | 0.473756 | 5_2:+67052549 | None:intergenic |
CGGTTAAATGGAAAAGCAAC+AGG | 0.474554 | 5_2:-67051148 | Msa0783210:CDS |
ATAGTATGTAGAATATTAAA+GGG | 0.475068 | 5_2:-67049180 | Msa0783210:three_prime_UTR |
GCTCCAAATACCAAGATTGT+TGG | 0.479181 | 5_2:+67050427 | None:intergenic |
AGTGAGTTGAAGAACGGGTG+AGG | 0.481557 | 5_2:+67054124 | None:intergenic |
ACGTTCAAGGCTACTAATGC+TGG | 0.481617 | 5_2:+67049592 | None:intergenic |
ATCCTTTCTCACGCTCTCTA+CGG | 0.482498 | 5_2:-67054152 | Msa0783210:CDS |
CAGTTGCAGAGAAGTTCAAA+AGG | 0.484219 | 5_2:-67050082 | Msa0783210:CDS |
CTCGTATTAAGGTGAATAAG+TGG | 0.484744 | 5_2:-67048834 | Msa0783210:three_prime_UTR |
ATGACATGAAGCTCCTCAAA+AGG | 0.489491 | 5_2:+67049072 | None:intergenic |
GTGGCTGCCTTCTCCCATAT+AGG | 0.489604 | 5_2:+67052620 | None:intergenic |
GGTTCTGTCTTTACAATGGT+GGG | 0.490337 | 5_2:+67049365 | None:intergenic |
ACTATAAAGGTGTTTGCACC+TGG | 0.493971 | 5_2:-67051594 | Msa0783210:CDS |
GCCTTGGAATCCAAAATGTC+GGG | 0.495320 | 5_2:+67050140 | None:intergenic |
TTAGGAGTGAGTTGAAGAAC+GGG | 0.495568 | 5_2:+67054119 | None:intergenic |
GAACCATGGGATGGAAAAGA+TGG | 0.495841 | 5_2:-67049347 | Msa0783210:CDS |
TGGTTCTGTCTTTACAATGG+TGG | 0.496152 | 5_2:+67049364 | None:intergenic |
CGTTCCTCATTGACCATAGC+CGG | 0.496245 | 5_2:-67048934 | Msa0783210:three_prime_UTR |
TTAGTGAAGTGTTTAGAAGA+TGG | 0.498830 | 5_2:-67048697 | Msa0783210:three_prime_UTR |
AGAGCATCCAATAATTTGAA+AGG | 0.498898 | 5_2:-67050854 | Msa0783210:CDS |
GTTAGGAGTGAGTTGAAGAA+CGG | 0.501891 | 5_2:+67054118 | None:intergenic |
CGCCTTGGAATCCAAAATGT+CGG | 0.513014 | 5_2:+67050139 | None:intergenic |
AAGGCAGCCACTGTGTTAAA+GGG | 0.515149 | 5_2:-67052608 | Msa0783210:CDS |
GAAGCTGGACGTGGAGGCAA+AGG | 0.515570 | 5_2:-67049413 | Msa0783210:CDS |
GAGCATCCAATAATTTGAAA+GGG | 0.518744 | 5_2:-67050853 | Msa0783210:CDS |
ATGTTGCACACAACCGGCTA+TGG | 0.522020 | 5_2:+67048921 | None:intergenic |
TGGTGGGAGGAGTGTCACCT+AGG | 0.522614 | 5_2:+67049381 | None:intergenic |
ATCCAATAATTTGAAAGGGA+AGG | 0.529134 | 5_2:-67050849 | Msa0783210:CDS |
TAAGGCTCTGACTCCTATAT+GGG | 0.533987 | 5_2:-67052633 | Msa0783210:CDS |
CCAGACCTTGAGCAGAAAGT+TGG | 0.535182 | 5_2:-67049634 | Msa0783210:CDS |
GGTGGGAGGAGTGTCACCTA+GGG | 0.535529 | 5_2:+67049382 | None:intergenic |
GAATTCTTTGCTCCATGGTG+CGG | 0.548779 | 5_2:-67052662 | Msa0783210:CDS |
GAGCAGAAAGTTGGTGTTGG+TGG | 0.549595 | 5_2:-67049625 | Msa0783210:CDS |
TCCTAACAACTTCAAGTCCA+AGG | 0.552476 | 5_2:-67054102 | Msa0783210:intron |
ATCCAAAATGTCGGGAAGGA+AGG | 0.552840 | 5_2:+67050148 | None:intergenic |
CCATGGTTCTGTCTTTACAA+TGG | 0.553296 | 5_2:+67049361 | None:intergenic |
GTAGCCTTGAACGTTAAGAA+AGG | 0.556407 | 5_2:-67049583 | Msa0783210:CDS |
AACATACCTCAGGAAAATGT+TGG | 0.556667 | 5_2:-67049033 | Msa0783210:three_prime_UTR |
TCACTACGCTTCTTCAACAA+TGG | 0.557550 | 5_2:-67054222 | Msa0783210:exon |
CTCTAGTGCGAATGATTCGA+TGG | 0.558140 | 5_2:+67050357 | None:intergenic |
GGTCTTGAACAGCTATGTAT+GGG | 0.559621 | 5_2:-67049674 | Msa0783210:intron |
AAAAGATGGAGAAATAATTG+AGG | 0.562273 | 5_2:-67049333 | Msa0783210:CDS |
GCCTTACAGTGCCCGCACCA+TGG | 0.567839 | 5_2:+67052650 | None:intergenic |
AACATTATTACGAGAAGACC+TGG | 0.569546 | 5_2:-67048967 | Msa0783210:three_prime_UTR |
GTTCTTGTATGAAGAGAAGA+AGG | 0.570808 | 5_2:+67054274 | None:intergenic |
CAACTGTTAATAACTGCTGA+AGG | 0.571823 | 5_2:+67050099 | None:intergenic |
GCAGTTCTAGCACCCTCGTA+AGG | 0.576634 | 5_2:+67050385 | None:intergenic |
CAACACCAACTTTCTGCTCA+AGG | 0.577087 | 5_2:+67049629 | None:intergenic |
GCTCCTTGGTAATCAACTGG+TGG | 0.580906 | 5_2:+67051567 | None:intergenic |
AGCAGAAAGTTGGTGTTGGT+GGG | 0.581032 | 5_2:-67049624 | Msa0783210:CDS |
AAGCTGGACGTGGAGGCAAA+GGG | 0.583780 | 5_2:-67049412 | Msa0783210:CDS |
TTTGTGAAAGAAGCTGGACG+TGG | 0.587104 | 5_2:-67049422 | Msa0783210:CDS |
AGCTATGTATGGGCAGCTGC+CGG | 0.590014 | 5_2:-67049664 | Msa0783210:CDS |
GGTTCTGAATTCAAATGGAG+TGG | 0.590632 | 5_2:-67052693 | Msa0783210:CDS |
TTCATGTCATTCTCATTCAG+TGG | 0.591892 | 5_2:-67049059 | Msa0783210:three_prime_UTR |
GGCTTAGATATAGGGACGGA+GGG | 0.591898 | 5_2:+67048636 | None:intergenic |
TCTGACTCCTATATGGGAGA+AGG | 0.598675 | 5_2:-67052627 | Msa0783210:CDS |
TTGTTGAAGAAGCGTAGTGA+TGG | 0.604630 | 5_2:+67054225 | None:intergenic |
TCTGTCTTTACAATGGTGGG+AGG | 0.605063 | 5_2:+67049368 | None:intergenic |
TCGTATTAAGGTGAATAAGT+GGG | 0.608145 | 5_2:-67048833 | Msa0783210:three_prime_UTR |
TAGTTCTACCGAAGAAGAAG+CGG | 0.621191 | 5_2:+67051099 | None:intergenic |
AGTTCAAAAGCACTCTTGAG+AGG | 0.621890 | 5_2:+67049550 | None:intergenic |
TCAGTGGTACAACATACCTC+AGG | 0.622601 | 5_2:-67049043 | Msa0783210:three_prime_UTR |
CATTGTAAAGACAGAACCAT+GGG | 0.623172 | 5_2:-67049360 | Msa0783210:CDS |
TTCTACCGAAGAAGAAGCGG+TGG | 0.624355 | 5_2:+67051102 | None:intergenic |
GGCAAAGGGAACTTGCCCCT+AGG | 0.627464 | 5_2:-67049398 | Msa0783210:CDS |
CTTGAGCAGAAAGTTGGTGT+TGG | 0.628583 | 5_2:-67049628 | Msa0783210:CDS |
GAGGAACGATCCAAAGAACC+AGG | 0.629610 | 5_2:+67048949 | None:intergenic |
AACACTTCACTAATGCATGT+AGG | 0.634863 | 5_2:+67048707 | None:intergenic |
TGGAATCCAAAATGTCGGGA+AGG | 0.635224 | 5_2:+67050144 | None:intergenic |
GATACTCCAATTCCTTACGA+GGG | 0.636183 | 5_2:-67050397 | Msa0783210:CDS |
TGTTGACTGTGATGCTGACA+AGG | 0.636371 | 5_2:-67050813 | Msa0783210:intron |
GTAAAGACAGAACCATGGGA+TGG | 0.640244 | 5_2:-67049356 | Msa0783210:CDS |
TATAGCTCTGTCACTTCTGG+AGG | 0.640322 | 5_2:+67050313 | None:intergenic |
GTGAAAGAAGCTGGACGTGG+AGG | 0.650513 | 5_2:-67049419 | Msa0783210:CDS |
GGGCTTAGATATAGGGACGG+AGG | 0.661411 | 5_2:+67048635 | None:intergenic |
TTAAATGGAAAAGCAACAGG+TGG | 0.661631 | 5_2:-67051145 | Msa0783210:CDS |
AAGACTAGTATAGTGATGAG+TGG | 0.663391 | 5_2:-67049095 | Msa0783210:three_prime_UTR |
AGATACTCCAATTCCTTACG+AGG | 0.665654 | 5_2:-67050398 | Msa0783210:CDS |
TCGAACGTTGCATTATAAAG+GGG | 0.665770 | 5_2:+67048789 | None:intergenic |
GTGGGAGGAGTGTCACCTAG+GGG | 0.673404 | 5_2:+67049383 | None:intergenic |
GAATATTAAAGGGAAATGTG+TGG | 0.677310 | 5_2:-67049170 | Msa0783210:three_prime_UTR |
ACAACCGGCTATGGTCAATG+AGG | 0.692842 | 5_2:+67048930 | None:intergenic |
AAGGGGCTTAGATATAGGGA+CGG | 0.695087 | 5_2:+67048632 | None:intergenic |
GAAGTGTTTAGAAGATGGCG+AGG | 0.699599 | 5_2:-67048692 | Msa0783210:three_prime_UTR |
CCATTGTAAAGACAGAACCA+TGG | 0.708421 | 5_2:-67049361 | Msa0783210:CDS |
AAACCACCAGTTGATTACCA+AGG | 0.716041 | 5_2:-67051570 | Msa0783210:CDS |
AACTACACCCTTTAACACAG+TGG | 0.729872 | 5_2:+67052601 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATCTGAAAAAAAAAATTAAT+AGG | - | chr5_2:67049169-67049188 | Msa0783210:three_prime_UTR | 10.0% |
!!! | AAATTATTCATATTTTCTTT+GGG | + | chr5_2:67050134-67050153 | None:intergenic | 10.0% |
!!! | AAAATTATTCATATTTTCTT+TGG | + | chr5_2:67050135-67050154 | None:intergenic | 10.0% |
!!! | GAAAAAATAATTTAGATTTT+TGG | - | chr5_2:67051262-67051281 | Msa0783210:intron | 10.0% |
!! | GTAATAAATAATTGAAATAT+AGG | + | chr5_2:67051933-67051952 | None:intergenic | 10.0% |
!! | TATAAATAAATTGAAAAGTA+AGG | + | chr5_2:67052369-67052388 | None:intergenic | 10.0% |
!!! | AGAACTAAATTTTAAATGTT+TGG | + | chr5_2:67049666-67049685 | None:intergenic | 15.0% |
!!! | CTTTTAATACAATATATGAT+TGG | - | chr5_2:67050080-67050099 | Msa0783210:CDS | 15.0% |
!! | AATATTTGATTGAAACTTTA+GGG | + | chr5_2:67051464-67051483 | None:intergenic | 15.0% |
!! | AAATATTTGATTGAAACTTT+AGG | + | chr5_2:67051465-67051484 | None:intergenic | 15.0% |
!! | TGAAAAATTACTACAAATAA+AGG | - | chr5_2:67051570-67051589 | Msa0783210:CDS | 15.0% |
!! | AAAAATAGACTTACATAATT+TGG | + | chr5_2:67053404-67053423 | None:intergenic | 15.0% |
!! | ATAGTATGTAGAATATTAAA+GGG | - | chr5_2:67053745-67053764 | Msa0783210:intron | 15.0% |
!! | ATTGAAAAAAGATTAAACCT+TGG | + | chr5_2:67048843-67048862 | None:intergenic | 20.0% |
!! | AAAAAACAACCTAAAAAAGT+GGG | + | chr5_2:67048889-67048908 | None:intergenic | 20.0% |
!!! | TTTAGGTTGTTTTTTCAAAT+TGG | - | chr5_2:67048894-67048913 | Msa0783210:three_prime_UTR | 20.0% |
!! | TAGCAATAAAATTTAGTTGA+AGG | - | chr5_2:67049491-67049510 | Msa0783210:intron | 20.0% |
!! | TACTAACTAAACTCAAATAA+AGG | - | chr5_2:67049834-67049853 | Msa0783210:intron | 20.0% |
!! | TATTGTATTAAAAGACTGTT+TGG | + | chr5_2:67050074-67050093 | None:intergenic | 20.0% |
!! | AAATTTAAATACTGAATCTG+AGG | + | chr5_2:67050420-67050439 | None:intergenic | 20.0% |
!! | ACACATATTCATATTCATAA+AGG | + | chr5_2:67050501-67050520 | None:intergenic | 20.0% |
!! | TAATTAAGCACTTATCATAT+AGG | + | chr5_2:67050828-67050847 | None:intergenic | 20.0% |
!!! | ATTAAGTTGTTTATCCAAAT+AGG | - | chr5_2:67050844-67050863 | Msa0783210:CDS | 20.0% |
!!! | TTAAGTTGTTTATCCAAATA+GGG | - | chr5_2:67050845-67050864 | Msa0783210:CDS | 20.0% |
!!! | ATATTTAAAATAGTTACAGG+AGG | + | chr5_2:67050879-67050898 | None:intergenic | 20.0% |
!!! | CACATATTTAAAATAGTTAC+AGG | + | chr5_2:67050882-67050901 | None:intergenic | 20.0% |
!!! | CTGTAACTATTTTAAATATG+TGG | - | chr5_2:67050880-67050899 | Msa0783210:CDS | 20.0% |
!!! | TAAAGTTGTTTGATGTTTTA+AGG | - | chr5_2:67050945-67050964 | Msa0783210:intron | 20.0% |
!! | CGTTAATGTAATATATTCTA+TGG | + | chr5_2:67051069-67051088 | None:intergenic | 20.0% |
!! | ATATTTGATTGAAACTTTAG+GGG | + | chr5_2:67051463-67051482 | None:intergenic | 20.0% |
!! | AATTTGATCAATAACTTGAA+AGG | - | chr5_2:67051595-67051614 | Msa0783210:CDS | 20.0% |
!! | ATTTGATCAATAACTTGAAA+GGG | - | chr5_2:67051596-67051615 | Msa0783210:CDS | 20.0% |
!!! | TGTCTTTTTTTATTTCTCAA+AGG | - | chr5_2:67052012-67052031 | Msa0783210:intron | 20.0% |
!! | TTTAACAAACTGTTATTGTT+CGG | - | chr5_2:67052221-67052240 | Msa0783210:intron | 20.0% |
!! | TCAGAATAATATAAACTCAA+AGG | + | chr5_2:67052425-67052444 | None:intergenic | 20.0% |
!!! | TCTTTCAAATTCAACTTTTT+CGG | - | chr5_2:67052948-67052967 | Msa0783210:intron | 20.0% |
!! | CATGTTTAAATCAAGATAAA+AGG | - | chr5_2:67053004-67053023 | Msa0783210:intron | 20.0% |
!! | TACTTACATGGAAATATAAT+GGG | - | chr5_2:67053119-67053138 | Msa0783210:intron | 20.0% |
!!! | AATGGTTTTTTGTTTGAATT+TGG | - | chr5_2:67053229-67053248 | Msa0783210:intron | 20.0% |
!!! | ATGGTTTTTTGTTTGAATTT+GGG | - | chr5_2:67053230-67053249 | Msa0783210:intron | 20.0% |
!!! | CTAATTTTATGCTAAATAGT+TGG | - | chr5_2:67053424-67053443 | Msa0783210:intron | 20.0% |
!! | GATAGTATGTAGAATATTAA+AGG | - | chr5_2:67053744-67053763 | Msa0783210:intron | 20.0% |
!!! | TTTTTCAGATTTTTCTTGTT+CGG | - | chr5_2:67053802-67053821 | Msa0783210:intron | 20.0% |
!! | TCAATCAATTGTTCATTAAT+GGG | + | chr5_2:67053939-67053958 | None:intergenic | 20.0% |
!! | TTCAATCAATTGTTCATTAA+TGG | + | chr5_2:67053940-67053959 | None:intergenic | 20.0% |
!!! | TTTTTTTTAAAGTAGCATAG+TGG | - | chr5_2:67054061-67054080 | Msa0783210:intron | 20.0% |
!! | AATTTATATAGACTCGTAAA+TGG | + | chr5_2:67054266-67054285 | None:intergenic | 20.0% |
! | GAAAAAACAACCTAAAAAAG+TGG | + | chr5_2:67048890-67048909 | None:intergenic | 25.0% |
!! | TTTTTGCTTGAAAACTATCT+GGG | - | chr5_2:67048946-67048965 | Msa0783210:three_prime_UTR | 25.0% |
!!! | TATGGTTGATTTTATGATTC+TGG | - | chr5_2:67049046-67049065 | Msa0783210:three_prime_UTR | 25.0% |
!!! | ATGGTTGATTTTATGATTCT+GGG | - | chr5_2:67049047-67049066 | Msa0783210:three_prime_UTR | 25.0% |
! | CAAAAGTTTATGTGTATGTT+TGG | + | chr5_2:67049728-67049747 | None:intergenic | 25.0% |
!! | CAAACATACACATAAACTTT+TGG | - | chr5_2:67049726-67049745 | Msa0783210:intron | 25.0% |
! | TCAAGAGCTTATGAAAATTA+GGG | + | chr5_2:67049966-67049985 | None:intergenic | 25.0% |
! | TTCAAGAGCTTATGAAAATT+AGG | + | chr5_2:67049967-67049986 | None:intergenic | 25.0% |
!!! | TATTCATATTTTCTTTGGGA+GGG | + | chr5_2:67050130-67050149 | None:intergenic | 25.0% |
!! | TTATTCATATTTTCTTTGGG+AGG | + | chr5_2:67050131-67050150 | None:intergenic | 25.0% |
!! | TATATAGTTTGTAATGCATC+AGG | - | chr5_2:67050179-67050198 | Msa0783210:CDS | 25.0% |
! | AGGAATGAAGAAATTAACAA+TGG | + | chr5_2:67050400-67050419 | None:intergenic | 25.0% |
! | AAAACAGCTTATAGCTTATT+TGG | - | chr5_2:67050747-67050766 | Msa0783210:intron | 25.0% |
! | TTATAGCTTATTTGGAAAAC+AGG | - | chr5_2:67050755-67050774 | Msa0783210:intron | 25.0% |
!!! | ATTTGTTATTGTTTGCATGA+CGG | - | chr5_2:67051139-67051158 | Msa0783210:CDS | 25.0% |
! | TATTTGATTGAAACTTTAGG+GGG | + | chr5_2:67051462-67051481 | None:intergenic | 25.0% |
!! | TAGTGTTACAATTTGGATTT+TGG | - | chr5_2:67051495-67051514 | Msa0783210:intron | 25.0% |
! | AGTGAGAATATCAATGTATT+GGG | - | chr5_2:67051665-67051684 | Msa0783210:intron | 25.0% |
! | AATATCAATGTATTGGGATT+AGG | - | chr5_2:67051671-67051690 | Msa0783210:intron | 25.0% |
! | ATATCAATGTATTGGGATTA+GGG | - | chr5_2:67051672-67051691 | Msa0783210:intron | 25.0% |
! | TATAGTTTATTTGCATGTAC+AGG | - | chr5_2:67051734-67051753 | Msa0783210:intron | 25.0% |
! | TTATCAAAAGCAAAGAACTT+TGG | - | chr5_2:67051874-67051893 | Msa0783210:intron | 25.0% |
!!! | TTTTTTATTTCTCAAAGGTG+TGG | - | chr5_2:67052017-67052036 | Msa0783210:intron | 25.0% |
! | TGAGTTTATATTATTCTGAC+AGG | - | chr5_2:67052426-67052445 | Msa0783210:intron | 25.0% |
! | GTACTTACATGGAAATATAA+TGG | - | chr5_2:67053118-67053137 | Msa0783210:intron | 25.0% |
! | AAAAGATGGAGAAATAATTG+AGG | - | chr5_2:67053592-67053611 | Msa0783210:intron | 25.0% |
! | CTTTTTGCTTGAAAACTATC+TGG | - | chr5_2:67048945-67048964 | Msa0783210:three_prime_UTR | 30.0% |
!!! | TGTCATGTTTCTGTTTTTGT+TGG | - | chr5_2:67049004-67049023 | Msa0783210:three_prime_UTR | 30.0% |
TTCCATGAAAACAAATGTGT+CGG | + | chr5_2:67049327-67049346 | None:intergenic | 30.0% | |
! | TATGTTTGGTTTCACTTTAG+AGG | + | chr5_2:67049714-67049733 | None:intergenic | 30.0% |
AACTCAAATAAAGGTCTGTT+TGG | - | chr5_2:67049843-67049862 | Msa0783210:intron | 30.0% | |
CAAGAGCTTATGAAAATTAG+GGG | + | chr5_2:67049965-67049984 | None:intergenic | 30.0% | |
!! | ATTCATATTTTCTTTGGGAG+GGG | + | chr5_2:67050129-67050148 | None:intergenic | 30.0% |
! | TGTAATGCATCAGGTTTTTA+TGG | - | chr5_2:67050188-67050207 | Msa0783210:CDS | 30.0% |
! | GTAATGCATCAGGTTTTTAT+GGG | - | chr5_2:67050189-67050208 | Msa0783210:CDS | 30.0% |
TCGAATAAACCAATCTAAAC+AGG | + | chr5_2:67050610-67050629 | None:intergenic | 30.0% | |
! | ATGGTTGCTTTACATAGAAA+GGG | + | chr5_2:67051050-67051069 | None:intergenic | 30.0% |
! | TATGGTTGCTTTACATAGAA+AGG | + | chr5_2:67051051-67051070 | None:intergenic | 30.0% |
CCTGTTATGATTTACATGTT+CGG | - | chr5_2:67051194-67051213 | Msa0783210:intron | 30.0% | |
! | GTCTTTTCTTAATTCCTTTC+AGG | - | chr5_2:67051285-67051304 | Msa0783210:intron | 30.0% |
CTTAATTCCTTTCAGGAATA+TGG | - | chr5_2:67051292-67051311 | Msa0783210:intron | 30.0% | |
TCTAATACCATATTCCTGAA+AGG | + | chr5_2:67051302-67051321 | None:intergenic | 30.0% | |
TTTCAGGAATATGGTATTAG+AGG | - | chr5_2:67051301-67051320 | Msa0783210:intron | 30.0% | |
TAGAGGATTTCCAACTATAA+AGG | - | chr5_2:67051318-67051337 | Msa0783210:intron | 30.0% | |
ACATGTGTAGTGTTACAATT+TGG | - | chr5_2:67051488-67051507 | Msa0783210:intron | 30.0% | |
! | AGATAGATGTCTTCTTTTTG+TGG | - | chr5_2:67051525-67051544 | Msa0783210:intron | 30.0% |
GAGTGAGAATATCAATGTAT+TGG | - | chr5_2:67051664-67051683 | Msa0783210:intron | 30.0% | |
TTATTTGCATGTACAGGTAA+AGG | - | chr5_2:67051740-67051759 | Msa0783210:intron | 30.0% | |
!!! | CAGGAGCTAATTTTTTACAA+TGG | + | chr5_2:67052043-67052062 | None:intergenic | 30.0% |
! | AGAGCATCCAATAATTTGAA+AGG | - | chr5_2:67052071-67052090 | Msa0783210:intron | 30.0% |
GAGCATCCAATAATTTGAAA+GGG | - | chr5_2:67052072-67052091 | Msa0783210:intron | 30.0% | |
ATCCAATAATTTGAAAGGGA+AGG | - | chr5_2:67052076-67052095 | Msa0783210:intron | 30.0% | |
AACCTTCCCTTTCAAATTAT+TGG | + | chr5_2:67052081-67052100 | None:intergenic | 30.0% | |
TTTGAAAGGGAAGGTTAAAT+TGG | - | chr5_2:67052085-67052104 | Msa0783210:intron | 30.0% | |
TTGAAAGGGAAGGTTAAATT+GGG | - | chr5_2:67052086-67052105 | Msa0783210:intron | 30.0% | |
GACAACACTTTCTACTAAAT+TGG | + | chr5_2:67052253-67052272 | None:intergenic | 30.0% | |
ATGCAGATAGCAAAAAATAG+CGG | + | chr5_2:67052326-67052345 | None:intergenic | 30.0% | |
! | AGGAATTGGAGTATCTTTAT+CGG | + | chr5_2:67052523-67052542 | None:intergenic | 30.0% |
TACAATGAAGTAAAGTTTGC+AGG | + | chr5_2:67052660-67052679 | None:intergenic | 30.0% | |
! | TAAACATGAGTGTTGTCTAT+AGG | - | chr5_2:67052709-67052728 | Msa0783210:intron | 30.0% |
ATTAACTCATGAGTCATAGA+GGG | + | chr5_2:67052929-67052948 | None:intergenic | 30.0% | |
!! | GAAATATAATGGGTTCTCAT+TGG | - | chr5_2:67053129-67053148 | Msa0783210:intron | 30.0% |
! | TTTTGATGAAGATGCATTGT+TGG | + | chr5_2:67053179-67053198 | None:intergenic | 30.0% |
TTATAGTTCATCTTTGGTTG+AGG | + | chr5_2:67053657-67053676 | None:intergenic | 30.0% | |
TCAACCAAAGATGAACTATA+AGG | - | chr5_2:67053656-67053675 | Msa0783210:intron | 30.0% | |
GTTTCCTTATAGTTCATCTT+TGG | + | chr5_2:67053663-67053682 | None:intergenic | 30.0% | |
!! | CATTACCAGTTTTATGCTAT+AGG | - | chr5_2:67053717-67053736 | Msa0783210:intron | 30.0% |
GAATATTAAAGGGAAATGTG+TGG | - | chr5_2:67053755-67053774 | Msa0783210:intron | 30.0% | |
TCGTATTAAGGTGAATAAGT+GGG | - | chr5_2:67054092-67054111 | Msa0783210:intron | 30.0% | |
! | TTAGTGAAGTGTTTAGAAGA+TGG | - | chr5_2:67054228-67054247 | Msa0783210:five_prime_UTR | 30.0% |
GTTCTTGTATGAAGAGAAGA+AGG | + | chr5_2:67048654-67048673 | None:intergenic | 35.0% | |
TGTAGTGTAGTGTGTGAATA+TGG | - | chr5_2:67049028-67049047 | Msa0783210:three_prime_UTR | 35.0% | |
TACACAACATCTATGAAGCA+TGG | + | chr5_2:67049413-67049432 | None:intergenic | 35.0% | |
AAATAGATTCTACCTGAAGC+TGG | + | chr5_2:67049612-67049631 | None:intergenic | 35.0% | |
! | GCTTCAGGTAGAATCTATTT+TGG | - | chr5_2:67049612-67049631 | Msa0783210:CDS | 35.0% |
!! | TCAGGTAGAATCTATTTTGG+AGG | - | chr5_2:67049615-67049634 | Msa0783210:CDS | 35.0% |
GGCAAAATTAATTCGACTCT+AGG | - | chr5_2:67049636-67049655 | Msa0783210:CDS | 35.0% | |
! | GAGCAAAAAATTGACTCTAG+AGG | + | chr5_2:67049692-67049711 | None:intergenic | 35.0% |
AATTAGGGGAAAACAGCTTA+TGG | + | chr5_2:67049951-67049970 | None:intergenic | 35.0% | |
!!! | GTGCTGTTTTGAATAATGAC+AGG | - | chr5_2:67050211-67050230 | Msa0783210:intron | 35.0% |
!! | TGACAGGTTCTGAATTCAAA+TGG | - | chr5_2:67050227-67050246 | Msa0783210:intron | 35.0% |
TTGTTGAATTCTTTGCTCCA+TGG | - | chr5_2:67050258-67050277 | Msa0783210:intron | 35.0% | |
TACATACCTTTGATGAACCA+TGG | - | chr5_2:67050561-67050580 | Msa0783210:intron | 35.0% | |
! | GGTATTGAACCTGTTTAGAT+TGG | - | chr5_2:67050598-67050617 | Msa0783210:intron | 35.0% |
TAAGTACCTGTTAGACAGTT+AGG | - | chr5_2:67050644-67050663 | Msa0783210:intron | 35.0% | |
AAGTACCTGTTAGACAGTTA+GGG | - | chr5_2:67050645-67050664 | Msa0783210:intron | 35.0% | |
CTTATTTCCATAAGCTCTCT+AGG | - | chr5_2:67050714-67050733 | Msa0783210:intron | 35.0% | |
AAGTTATCCTAGAGAGCTTA+TGG | + | chr5_2:67050724-67050743 | None:intergenic | 35.0% | |
TGTTTATCCAAATAGGGTCA+AGG | - | chr5_2:67050851-67050870 | Msa0783210:CDS | 35.0% | |
GTTTATCCAAATAGGGTCAA+GGG | - | chr5_2:67050852-67050871 | Msa0783210:CDS | 35.0% | |
TTACATAGAAAGGGAAGACT+AGG | + | chr5_2:67051041-67051060 | None:intergenic | 35.0% | |
ACAAATGTCATGTAAGAGAC+AGG | + | chr5_2:67051125-67051144 | None:intergenic | 35.0% | |
CATAACAGGAGAAAGTTACA+GGG | + | chr5_2:67051183-67051202 | None:intergenic | 35.0% | |
TCATAACAGGAGAAAGTTAC+AGG | + | chr5_2:67051184-67051203 | None:intergenic | 35.0% | |
CCGAACATGTAAATCATAAC+AGG | + | chr5_2:67051197-67051216 | None:intergenic | 35.0% | |
!! | TAAAGGCTCTTTTGAAGGAA+CGG | - | chr5_2:67051757-67051776 | Msa0783210:intron | 35.0% |
!! | CTTTTGAAGGAACGGTTAAA+TGG | - | chr5_2:67051765-67051784 | Msa0783210:intron | 35.0% |
TTAAATGGAAAAGCAACAGG+TGG | - | chr5_2:67051780-67051799 | Msa0783210:intron | 35.0% | |
CTCTAGTAACTTCGATGAAT+TGG | - | chr5_2:67051851-67051870 | Msa0783210:intron | 35.0% | |
! | TTGTAGAATTTTTCGCACCT+TGG | - | chr5_2:67051898-67051917 | Msa0783210:intron | 35.0% |
!! | AATATAGGAAGTACTCACCA+AGG | + | chr5_2:67051918-67051937 | None:intergenic | 35.0% |
GTAGAATTACATGTTCAGTC+AGG | + | chr5_2:67051955-67051974 | None:intergenic | 35.0% | |
GTAAAAAATTAGCTCCTGAG+TGG | - | chr5_2:67052045-67052064 | Msa0783210:intron | 35.0% | |
GAATCAGTTTCGTCAAATAG+CGG | - | chr5_2:67052181-67052200 | Msa0783210:intron | 35.0% | |
TTCCCAACAATCTTGGTATT+TGG | - | chr5_2:67052495-67052514 | Msa0783210:intron | 35.0% | |
CTCCAAATACCAAGATTGTT+GGG | + | chr5_2:67052500-67052519 | None:intergenic | 35.0% | |
! | GTGTTGTCTATAGGATGTTT+TGG | - | chr5_2:67052718-67052737 | Msa0783210:intron | 35.0% |
!!! | GATGTTTTGGAAGAGAAATG+TGG | - | chr5_2:67052731-67052750 | Msa0783210:intron | 35.0% |
CAACTGTTAATAACTGCTGA+AGG | + | chr5_2:67052829-67052848 | None:intergenic | 35.0% | |
!!! | TGTTTTTTTCCTTGCCTGTA+AGG | + | chr5_2:67052872-67052891 | None:intergenic | 35.0% |
GATTAACTCATGAGTCATAG+AGG | + | chr5_2:67052930-67052949 | None:intergenic | 35.0% | |
TGTTGCAAAGTGTACTTACA+TGG | - | chr5_2:67053107-67053126 | Msa0783210:intron | 35.0% | |
CTTTGTTGACGAATGCTTAA+TGG | - | chr5_2:67053211-67053230 | Msa0783210:intron | 35.0% | |
AACACCTTTCTTAACGTTCA+AGG | + | chr5_2:67053349-67053368 | None:intergenic | 35.0% | |
AGAGAATTTGTGAAAGAAGC+TGG | - | chr5_2:67053497-67053516 | Msa0783210:intron | 35.0% | |
CATTGTAAAGACAGAACCAT+GGG | - | chr5_2:67053565-67053584 | Msa0783210:intron | 35.0% | |
CATCTCCTATAGCATAAAAC+TGG | + | chr5_2:67053725-67053744 | None:intergenic | 35.0% | |
GAAAAATCTGAAAAACAGCG+AGG | + | chr5_2:67053797-67053816 | None:intergenic | 35.0% | |
AAGACTAGTATAGTGATGAG+TGG | - | chr5_2:67053830-67053849 | Msa0783210:intron | 35.0% | |
TTCATGTCATTCTCATTCAG+TGG | - | chr5_2:67053866-67053885 | Msa0783210:intron | 35.0% | |
AACATACCTCAGGAAAATGT+TGG | - | chr5_2:67053892-67053911 | Msa0783210:intron | 35.0% | |
AACATTATTACGAGAAGACC+TGG | - | chr5_2:67053958-67053977 | Msa0783210:intron | 35.0% | |
CTCGTATTAAGGTGAATAAG+TGG | - | chr5_2:67054091-67054110 | Msa0783210:intron | 35.0% | |
TCGAACGTTGCATTATAAAG+GGG | + | chr5_2:67054139-67054158 | None:intergenic | 35.0% | |
CTCGAACGTTGCATTATAAA+GGG | + | chr5_2:67054140-67054159 | None:intergenic | 35.0% | |
AACACTTCACTAATGCATGT+AGG | + | chr5_2:67054221-67054240 | None:intergenic | 35.0% | |
GAATCTGCGAGTGATGAAAA+TGG | + | chr5_2:67048678-67048697 | None:intergenic | 40.0% | |
! | TTGTTGAAGAAGCGTAGTGA+TGG | + | chr5_2:67048703-67048722 | None:intergenic | 40.0% |
TCACTACGCTTCTTCAACAA+TGG | - | chr5_2:67048703-67048722 | Msa0783210:three_prime_UTR | 40.0% | |
! | TTAGGAGTGAGTTGAAGAAC+GGG | + | chr5_2:67048809-67048828 | None:intergenic | 40.0% |
! | GTTAGGAGTGAGTTGAAGAA+CGG | + | chr5_2:67048810-67048829 | None:intergenic | 40.0% |
TCCTAACAACTTCAAGTCCA+AGG | - | chr5_2:67048823-67048842 | Msa0783210:three_prime_UTR | 40.0% | |
ACCTTGGACTTGAAGTTGTT+AGG | + | chr5_2:67048827-67048846 | None:intergenic | 40.0% | |
AAAAAGTGGGATCACGAACT+GGG | + | chr5_2:67048876-67048895 | None:intergenic | 40.0% | |
AAAAAAGTGGGATCACGAAC+TGG | + | chr5_2:67048877-67048896 | None:intergenic | 40.0% | |
!!! | GTTCGTGATCCCACTTTTTT+AGG | - | chr5_2:67048877-67048896 | Msa0783210:three_prime_UTR | 40.0% |
! | CTATCTGGGTGTTTTGTGTT+TGG | - | chr5_2:67048960-67048979 | Msa0783210:three_prime_UTR | 40.0% |
!! | CACCGACACATTTGTTTTCA+TGG | - | chr5_2:67049322-67049341 | Msa0783210:CDS | 40.0% |
AAGCTACAATTTCCAGCTTC+AGG | - | chr5_2:67049597-67049616 | Msa0783210:CDS | 40.0% | |
!! | GGTTCTGAATTCAAATGGAG+TGG | - | chr5_2:67050232-67050251 | Msa0783210:intron | 40.0% |
! | TAAGGCTCTGACTCCTATAT+GGG | - | chr5_2:67050292-67050311 | Msa0783210:intron | 40.0% |
AACTACACCCTTTAACACAG+TGG | + | chr5_2:67050327-67050346 | None:intergenic | 40.0% | |
ACTTTCCCTAACTGTCTAAC+AGG | + | chr5_2:67050653-67050672 | None:intergenic | 40.0% | |
!!! | TGATGTTTTAAGGCATGTCC+AGG | - | chr5_2:67050955-67050974 | Msa0783210:intron | 40.0% |
GATATACAATACGTCGAGCA+TGG | + | chr5_2:67050987-67051006 | None:intergenic | 40.0% | |
GAAGACTAGGAATGTAAGGA+AGG | + | chr5_2:67051028-67051047 | None:intergenic | 40.0% | |
AAGGGAAGACTAGGAATGTA+AGG | + | chr5_2:67051032-67051051 | None:intergenic | 40.0% | |
GGTGCAAACACCTTTATAGT+TGG | + | chr5_2:67051331-67051350 | None:intergenic | 40.0% | |
!! | ACTATAAAGGTGTTTGCACC+TGG | - | chr5_2:67051331-67051350 | Msa0783210:intron | 40.0% |
! | TAATCAACTGGTGGTTTTCC+AGG | + | chr5_2:67051352-67051371 | None:intergenic | 40.0% |
AAACCACCAGTTGATTACCA+AGG | - | chr5_2:67051355-67051374 | Msa0783210:intron | 40.0% | |
! | GGCAATTGGTTTAACATCTC+TGG | + | chr5_2:67051383-67051402 | None:intergenic | 40.0% |
AACCTGTTGAAGTGCGAATT+CGG | + | chr5_2:67051404-67051423 | None:intergenic | 40.0% | |
!! | GGTTTGTTGGAATCTCTTCT+TGG | - | chr5_2:67051420-67051439 | Msa0783210:intron | 40.0% |
ACTCTTCTAGCAACATCACT+TGG | - | chr5_2:67051621-67051640 | Msa0783210:CDS | 40.0% | |
! | ACAGGTAAAGGCTCTTTTGA+AGG | - | chr5_2:67051752-67051771 | Msa0783210:intron | 40.0% |
CGGTTAAATGGAAAAGCAAC+AGG | - | chr5_2:67051777-67051796 | Msa0783210:intron | 40.0% | |
! | TAGTTCTACCGAAGAAGAAG+CGG | + | chr5_2:67051829-67051848 | None:intergenic | 40.0% |
ATGCTGACAAGGTAAGCTTA+TGG | - | chr5_2:67052123-67052142 | Msa0783210:intron | 40.0% | |
TGCTATAGTGCTTCTATAGC+TGG | + | chr5_2:67052282-67052301 | None:intergenic | 40.0% | |
TTTGTCAGTCTCTAATGAGC+AGG | - | chr5_2:67052457-67052476 | Msa0783210:intron | 40.0% | |
ATGAGCAGGTTCAATGTTCA+AGG | - | chr5_2:67052471-67052490 | Msa0783210:intron | 40.0% | |
TCAAGGATTCCCAACAATCT+TGG | - | chr5_2:67052488-67052507 | Msa0783210:intron | 40.0% | |
GCTCCAAATACCAAGATTGT+TGG | + | chr5_2:67052501-67052520 | None:intergenic | 40.0% | |
AGATACTCCAATTCCTTACG+AGG | - | chr5_2:67052527-67052546 | Msa0783210:intron | 40.0% | |
GATACTCCAATTCCTTACGA+GGG | - | chr5_2:67052528-67052547 | Msa0783210:intron | 40.0% | |
! | CTATATAGCTCTGTCACTTC+TGG | + | chr5_2:67052618-67052637 | None:intergenic | 40.0% |
CAGTTGCAGAGAAGTTCAAA+AGG | - | chr5_2:67052843-67052862 | Msa0783210:intron | 40.0% | |
AGTTCAAAAGGAGTCCTTAC+AGG | - | chr5_2:67052855-67052874 | Msa0783210:intron | 40.0% | |
GGTCTTGAACAGCTATGTAT+GGG | - | chr5_2:67053251-67053270 | Msa0783210:intron | 40.0% | |
! | GTAGCCTTGAACGTTAAGAA+AGG | - | chr5_2:67053342-67053361 | Msa0783210:intron | 40.0% |
!! | AGTTCAAAAGCACTCTTGAG+AGG | + | chr5_2:67053378-67053397 | None:intergenic | 40.0% |
GGTTCTGTCTTTACAATGGT+GGG | + | chr5_2:67053563-67053582 | None:intergenic | 40.0% | |
! | TGGTTCTGTCTTTACAATGG+TGG | + | chr5_2:67053564-67053583 | None:intergenic | 40.0% |
! | CCATGGTTCTGTCTTTACAA+TGG | + | chr5_2:67053567-67053586 | None:intergenic | 40.0% |
CCATTGTAAAGACAGAACCA+TGG | - | chr5_2:67053564-67053583 | Msa0783210:intron | 40.0% | |
ATGACATGAAGCTCCTCAAA+AGG | + | chr5_2:67053856-67053875 | None:intergenic | 40.0% | |
! | AACATGCCAACATTTTCCTG+AGG | + | chr5_2:67053901-67053920 | None:intergenic | 40.0% |
TGTTGAATGTTGCACACAAC+CGG | + | chr5_2:67054013-67054032 | None:intergenic | 40.0% | |
GTGGCTTGAAACTCGTATTA+AGG | - | chr5_2:67054080-67054099 | Msa0783210:intron | 40.0% | |
GCTCGAACGTTGCATTATAA+AGG | + | chr5_2:67054141-67054160 | None:intergenic | 40.0% | |
CAACGTTCGAGCTATGTTTA+CGG | - | chr5_2:67054149-67054168 | Msa0783210:CDS | 40.0% | |
ATCCTTTCTCACGCTCTCTA+CGG | - | chr5_2:67048773-67048792 | Msa0783210:three_prime_UTR | 45.0% | |
GAATTCTTTGCTCCATGGTG+CGG | - | chr5_2:67050263-67050282 | Msa0783210:intron | 45.0% | |
AATTCTTTGCTCCATGGTGC+GGG | - | chr5_2:67050264-67050283 | Msa0783210:intron | 45.0% | |
! | GTAAGGCTCTGACTCCTATA+TGG | - | chr5_2:67050291-67050310 | Msa0783210:intron | 45.0% |
TCTGACTCCTATATGGGAGA+AGG | - | chr5_2:67050298-67050317 | Msa0783210:intron | 45.0% | |
AAGGCAGCCACTGTGTTAAA+GGG | - | chr5_2:67050317-67050336 | Msa0783210:CDS | 45.0% | |
CATCGTCCATGGTTCATCAA+AGG | + | chr5_2:67050570-67050589 | None:intergenic | 45.0% | |
ACCATGGACGATGCAAAACA+TGG | - | chr5_2:67050577-67050596 | Msa0783210:intron | 45.0% | |
! | ACCATGTTTTGCATCGTCCA+TGG | + | chr5_2:67050581-67050600 | None:intergenic | 45.0% |
TACAATACGTCGAGCATGGT+AGG | + | chr5_2:67050983-67051002 | None:intergenic | 45.0% | |
! | GTTTAACATCTCTGGCTCCT+TGG | + | chr5_2:67051375-67051394 | None:intergenic | 45.0% |
TGAAGTGCGAATTCGGCAAT+TGG | + | chr5_2:67051397-67051416 | None:intergenic | 45.0% | |
TCGCACTTCAACAGGTTTGT+TGG | - | chr5_2:67051407-67051426 | Msa0783210:intron | 45.0% | |
AGAAACCACCGCTTCTTCTT+CGG | - | chr5_2:67051818-67051837 | Msa0783210:intron | 45.0% | |
! | TTGGATGCTCTTTTCCACTC+AGG | + | chr5_2:67052062-67052081 | None:intergenic | 45.0% |
! | TGTTGACTGTGATGCTGACA+AGG | - | chr5_2:67052112-67052131 | Msa0783210:intron | 45.0% |
! | GAAGCACTATAGCACTGTAG+TGG | - | chr5_2:67052288-67052307 | Msa0783210:intron | 45.0% |
CTCTAGTGCGAATGATTCGA+TGG | + | chr5_2:67052571-67052590 | None:intergenic | 45.0% | |
! | TATAGCTCTGTCACTTCTGG+AGG | + | chr5_2:67052615-67052634 | None:intergenic | 45.0% |
! | TTCCTTCCTTCCCGACATTT+TGG | - | chr5_2:67052775-67052794 | Msa0783210:intron | 45.0% |
ATCCAAAATGTCGGGAAGGA+AGG | + | chr5_2:67052780-67052799 | None:intergenic | 45.0% | |
TGGAATCCAAAATGTCGGGA+AGG | + | chr5_2:67052784-67052803 | None:intergenic | 45.0% | |
! | TCCCGACATTTTGGATTCCA+AGG | - | chr5_2:67052784-67052803 | Msa0783210:intron | 45.0% |
GCCTTGGAATCCAAAATGTC+GGG | + | chr5_2:67052788-67052807 | None:intergenic | 45.0% | |
CGCCTTGGAATCCAAAATGT+CGG | + | chr5_2:67052789-67052808 | None:intergenic | 45.0% | |
! | CGACATTTTGGATTCCAAGG+CGG | - | chr5_2:67052787-67052806 | Msa0783210:intron | 45.0% |
! | ATTTTGGATTCCAAGGCGGA+GGG | - | chr5_2:67052791-67052810 | Msa0783210:intron | 45.0% |
AAAAGGAGTCCTTACAGGCA+AGG | - | chr5_2:67052860-67052879 | Msa0783210:intron | 45.0% | |
GGGTCTTGAACAGCTATGTA+TGG | - | chr5_2:67053250-67053269 | Msa0783210:intron | 45.0% | |
CAACACCAACTTTCTGCTCA+AGG | + | chr5_2:67053299-67053318 | None:intergenic | 45.0% | |
!! | CTTGAGCAGAAAGTTGGTGT+TGG | - | chr5_2:67053297-67053316 | Msa0783210:intron | 45.0% |
!! | AGCAGAAAGTTGGTGTTGGT+GGG | - | chr5_2:67053301-67053320 | Msa0783210:intron | 45.0% |
!! | AAAGTTGGTGTTGGTGGGTA+TGG | - | chr5_2:67053306-67053325 | Msa0783210:intron | 45.0% |
ACGTTCAAGGCTACTAATGC+TGG | + | chr5_2:67053336-67053355 | None:intergenic | 45.0% | |
TTTGTGAAAGAAGCTGGACG+TGG | - | chr5_2:67053503-67053522 | Msa0783210:intron | 45.0% | |
! | TCTGTCTTTACAATGGTGGG+AGG | + | chr5_2:67053560-67053579 | None:intergenic | 45.0% |
GTAAAGACAGAACCATGGGA+TGG | - | chr5_2:67053569-67053588 | Msa0783210:intron | 45.0% | |
GAACCATGGGATGGAAAAGA+TGG | - | chr5_2:67053578-67053597 | Msa0783210:intron | 45.0% | |
! | TCTCCATCTTTTCCATCCCA+TGG | + | chr5_2:67053584-67053603 | None:intergenic | 45.0% |
! | TAGTGATGAGTGGCCTTTTG+AGG | - | chr5_2:67053840-67053859 | Msa0783210:intron | 45.0% |
TCAGTGGTACAACATACCTC+AGG | - | chr5_2:67053882-67053901 | Msa0783210:intron | 45.0% | |
! | TACGAGAAGACCTGGTTCTT+TGG | - | chr5_2:67053966-67053985 | Msa0783210:intron | 45.0% |
! | GAAGTGTTTAGAAGATGGCG+AGG | - | chr5_2:67054233-67054252 | Msa0783210:five_prime_UTR | 45.0% |
!!! | AAAAAATAATTTAGATTTTT+GGG | - | chr5_2:67051263-67051282 | Msa0783210:intron | 5.0% |
! | AACCGTAGAGAGCGTGAGAA+AGG | + | chr5_2:67048778-67048797 | None:intergenic | 50.0% |
! | AGTGAGTTGAAGAACGGGTG+AGG | + | chr5_2:67048804-67048823 | None:intergenic | 50.0% |
!! | TATGAAGCACCGACCCTCTT+CGG | - | chr5_2:67049248-67049267 | Msa0783210:three_prime_UTR | 50.0% |
ACGTCTAATCCGAAGAGGGT+CGG | + | chr5_2:67049260-67049279 | None:intergenic | 50.0% | |
GGACACGTCTAATCCGAAGA+GGG | + | chr5_2:67049264-67049283 | None:intergenic | 50.0% | |
! | CTCTTCGGATTAGACGTGTC+CGG | - | chr5_2:67049263-67049282 | Msa0783210:exon | 50.0% |
! | TCTTCGGATTAGACGTGTCC+GGG | - | chr5_2:67049264-67049283 | Msa0783210:exon | 50.0% |
!! | TGTCGGTGTCAATGTCGTGT+CGG | + | chr5_2:67049310-67049329 | None:intergenic | 50.0% |
GTCAGTGTCCACATCGTATC+AGG | - | chr5_2:67049384-67049403 | Msa0783210:CDS | 50.0% | |
CATGGACACCTGATACGATG+TGG | + | chr5_2:67049395-67049414 | None:intergenic | 50.0% | |
GAAGGCAGCCACTGTGTTAA+AGG | - | chr5_2:67050316-67050335 | Msa0783210:CDS | 50.0% | |
TGCTGATGCTCACCAATCTC+TGG | - | chr5_2:67050364-67050383 | Msa0783210:CDS | 50.0% | |
GGAAAACCTGAGCCAGAGAT+TGG | + | chr5_2:67050379-67050398 | None:intergenic | 50.0% | |
! | GCTCCTTGGTAATCAACTGG+TGG | + | chr5_2:67051361-67051380 | None:intergenic | 50.0% |
! | CTGGCTCCTTGGTAATCAAC+TGG | + | chr5_2:67051364-67051383 | None:intergenic | 50.0% |
TGCCGAATTCGCACTTCAAC+AGG | - | chr5_2:67051399-67051418 | Msa0783210:intron | 50.0% | |
TTCTACCGAAGAAGAAGCGG+TGG | + | chr5_2:67051826-67051845 | None:intergenic | 50.0% | |
CTAGCACCCTCGTAAGGAAT+TGG | + | chr5_2:67052537-67052556 | None:intergenic | 50.0% | |
ATCATTCGCACTAGAGCAGC+TGG | - | chr5_2:67052575-67052594 | Msa0783210:CDS | 50.0% | |
GCAGGAGAACAAACACTCAC+TGG | + | chr5_2:67052642-67052661 | None:intergenic | 50.0% | |
! | CATTTTGGATTCCAAGGCGG+AGG | - | chr5_2:67052790-67052809 | Msa0783210:intron | 50.0% |
! | TTTTGGATTCCAAGGCGGAG+GGG | - | chr5_2:67052792-67052811 | Msa0783210:intron | 50.0% |
CCAACTTTCTGCTCAAGGTC+TGG | + | chr5_2:67053294-67053313 | None:intergenic | 50.0% | |
CCAGACCTTGAGCAGAAAGT+TGG | - | chr5_2:67053291-67053310 | Msa0783210:intron | 50.0% | |
!! | GAGCAGAAAGTTGGTGTTGG+TGG | - | chr5_2:67053300-67053319 | Msa0783210:intron | 50.0% |
GAGGAACGATCCAAAGAACC+AGG | + | chr5_2:67053979-67053998 | None:intergenic | 50.0% | |
CGTTCCTCATTGACCATAGC+CGG | - | chr5_2:67053991-67054010 | Msa0783210:intron | 50.0% | |
ACAACCGGCTATGGTCAATG+AGG | + | chr5_2:67053998-67054017 | None:intergenic | 50.0% | |
ATGTTGCACACAACCGGCTA+TGG | + | chr5_2:67054007-67054026 | None:intergenic | 50.0% | |
CGGACACGTCTAATCCGAAG+AGG | + | chr5_2:67049265-67049284 | None:intergenic | 55.0% | |
ACACACGCATGTCTGACACC+CGG | + | chr5_2:67049285-67049304 | None:intergenic | 55.0% | |
ACGATGTGGACACTGACACG+TGG | + | chr5_2:67049381-67049400 | None:intergenic | 55.0% | |
GTGGCTGCCTTCTCCCATAT+AGG | + | chr5_2:67050308-67050327 | None:intergenic | 55.0% | |
! | TGCTCACCAATCTCTGGCTC+AGG | - | chr5_2:67050370-67050389 | Msa0783210:CDS | 55.0% |
GGAGGACCCTTGACCCTATT+TGG | + | chr5_2:67050861-67050880 | None:intergenic | 55.0% | |
! | GCAGTTCTAGCACCCTCGTA+AGG | + | chr5_2:67052543-67052562 | None:intergenic | 55.0% |
AGCTATGTATGGGCAGCTGC+CGG | - | chr5_2:67053261-67053280 | Msa0783210:intron | 55.0% | |
CTCAAGGTCTGGCTGCTTAC+CGG | + | chr5_2:67053283-67053302 | None:intergenic | 55.0% | |
GTGAAAGAAGCTGGACGTGG+AGG | - | chr5_2:67053506-67053525 | Msa0783210:intron | 55.0% | |
AAGCTGGACGTGGAGGCAAA+GGG | - | chr5_2:67053513-67053532 | Msa0783210:intron | 55.0% | |
! | TCCATGGTGCGGGCACTGTA+AGG | - | chr5_2:67050274-67050293 | Msa0783210:intron | 60.0% |
CGTCGAGCATGGTAGGATCC+TGG | + | chr5_2:67050976-67050995 | None:intergenic | 60.0% | |
! | TCTGTTTCTCCCCTCCGCCT+TGG | + | chr5_2:67052804-67052823 | None:intergenic | 60.0% |
GAAGCTGGACGTGGAGGCAA+AGG | - | chr5_2:67053512-67053531 | Msa0783210:intron | 60.0% | |
GGCAAAGGGAACTTGCCCCT+AGG | - | chr5_2:67053527-67053546 | Msa0783210:intron | 60.0% | |
!! | GTGGGAGGAGTGTCACCTAG+GGG | + | chr5_2:67053545-67053564 | None:intergenic | 60.0% |
!! | GGTGGGAGGAGTGTCACCTA+GGG | + | chr5_2:67053546-67053565 | None:intergenic | 60.0% |
!! | TGGTGGGAGGAGTGTCACCT+AGG | + | chr5_2:67053547-67053566 | None:intergenic | 60.0% |
GCCTTACAGTGCCCGCACCA+TGG | + | chr5_2:67050278-67050297 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 67048638 | 67054309 | 67048638 | ID=Msa0783210;Name=Msa0783210 |
chr5_2 | mRNA | 67048638 | 67054309 | 67048638 | ID=Msa0783210-mRNA-1;Parent=Msa0783210;Name=Msa0783210-mRNA-1;_AED=0.15;_eAED=0.15;_QI=84|1|1|1|1|1|9|633|435 |
chr5_2 | exon | 67048638 | 67049448 | 67048638 | ID=Msa0783210-mRNA-1:exon:20141;Parent=Msa0783210-mRNA-1 |
chr5_2 | exon | 67049538 | 67049684 | 67049538 | ID=Msa0783210-mRNA-1:exon:20140;Parent=Msa0783210-mRNA-1 |
chr5_2 | exon | 67050071 | 67050216 | 67050071 | ID=Msa0783210-mRNA-1:exon:20139;Parent=Msa0783210-mRNA-1 |
chr5_2 | exon | 67050306 | 67050482 | 67050306 | ID=Msa0783210-mRNA-1:exon:20138;Parent=Msa0783210-mRNA-1 |
chr5_2 | exon | 67050814 | 67050913 | 67050814 | ID=Msa0783210-mRNA-1:exon:20137;Parent=Msa0783210-mRNA-1 |
chr5_2 | exon | 67051028 | 67051191 | 67051028 | ID=Msa0783210-mRNA-1:exon:20136;Parent=Msa0783210-mRNA-1 |
chr5_2 | exon | 67051527 | 67051640 | 67051527 | ID=Msa0783210-mRNA-1:exon:20135;Parent=Msa0783210-mRNA-1 |
chr5_2 | exon | 67052556 | 67052714 | 67052556 | ID=Msa0783210-mRNA-1:exon:20134;Parent=Msa0783210-mRNA-1 |
chr5_2 | exon | 67054103 | 67054309 | 67054103 | ID=Msa0783210-mRNA-1:exon:20133;Parent=Msa0783210-mRNA-1 |
chr5_2 | five_prime_UTR | 67054226 | 67054309 | 67054226 | ID=Msa0783210-mRNA-1:five_prime_utr;Parent=Msa0783210-mRNA-1 |
chr5_2 | CDS | 67054103 | 67054225 | 67054103 | ID=Msa0783210-mRNA-1:cds;Parent=Msa0783210-mRNA-1 |
chr5_2 | CDS | 67052556 | 67052714 | 67052556 | ID=Msa0783210-mRNA-1:cds;Parent=Msa0783210-mRNA-1 |
chr5_2 | CDS | 67051527 | 67051640 | 67051527 | ID=Msa0783210-mRNA-1:cds;Parent=Msa0783210-mRNA-1 |
chr5_2 | CDS | 67051028 | 67051191 | 67051028 | ID=Msa0783210-mRNA-1:cds;Parent=Msa0783210-mRNA-1 |
chr5_2 | CDS | 67050814 | 67050913 | 67050814 | ID=Msa0783210-mRNA-1:cds;Parent=Msa0783210-mRNA-1 |
chr5_2 | CDS | 67050306 | 67050482 | 67050306 | ID=Msa0783210-mRNA-1:cds;Parent=Msa0783210-mRNA-1 |
chr5_2 | CDS | 67050071 | 67050216 | 67050071 | ID=Msa0783210-mRNA-1:cds;Parent=Msa0783210-mRNA-1 |
chr5_2 | CDS | 67049538 | 67049684 | 67049538 | ID=Msa0783210-mRNA-1:cds;Parent=Msa0783210-mRNA-1 |
chr5_2 | CDS | 67049271 | 67049448 | 67049271 | ID=Msa0783210-mRNA-1:cds;Parent=Msa0783210-mRNA-1 |
chr5_2 | three_prime_UTR | 67048638 | 67049270 | 67048638 | ID=Msa0783210-mRNA-1:three_prime_utr;Parent=Msa0783210-mRNA-1 |
Gene Sequence |
Protein sequence |