Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0785240 | sp|Q9LZN0|ROGF7_ARATH | 54.779 | 429 | 131 | 9 | 63 | 439 | 52 | 469 | 8.46e-149 | 438 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0785240 | F6LPU5 | 83.429 | 525 | 28 | 6 | 1 | 469 | 1 | 522 | 0.0 | 808 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032980 | Msa0785240 | 0.807752 | 4.334281e-50 | -8.615850e-47 |
| Msa0091350 | Msa0785240 | 0.811154 | 8.066445e-51 | -8.615850e-47 |
| Msa0607800 | Msa0785240 | 0.805731 | 1.158434e-49 | -8.615850e-47 |
| Msa0690740 | Msa0785240 | 0.800730 | 1.256417e-48 | -8.615850e-47 |
| Msa0714520 | Msa0785240 | 0.822552 | 2.228178e-53 | -8.615850e-47 |
| Msa0737990 | Msa0785240 | 0.804460 | 2.137985e-49 | -8.615850e-47 |
| Msa0743440 | Msa0785240 | 0.818771 | 1.647357e-52 | -8.615850e-47 |
| Msa0785240 | Msa0817360 | 0.850222 | 1.952694e-60 | -8.615850e-47 |
| Msa0785240 | Msa0857890 | 0.851853 | 6.769110e-61 | -8.615850e-47 |
| Msa0785240 | Msa1059020 | 0.806539 | 7.831798e-50 | -8.615850e-47 |
| Msa0785240 | Msa1104220 | 0.801679 | 8.036227e-49 | -8.615850e-47 |
| Msa0785240 | Msa1213830 | 0.812362 | 4.405501e-51 | -8.615850e-47 |
| Msa0785240 | Msa1214350 | 0.812352 | 4.425996e-51 | -8.615850e-47 |
| Msa0785240 | Msa1294460 | 0.812609 | 3.889258e-51 | -8.615850e-47 |
| Msa0785240 | Msa1305920 | 0.804318 | 2.287971e-49 | -8.615850e-47 |
| Msa0785240 | Msa1332950 | 0.803787 | 2.950266e-49 | -8.615850e-47 |
| Msa0127340 | Msa0785240 | 0.807321 | 5.350880e-50 | -8.615850e-47 |
| Msa0165830 | Msa0785240 | 0.819376 | 1.199892e-52 | -8.615850e-47 |
| Msa0433760 | Msa0785240 | 0.805271 | 1.447130e-49 | -8.615850e-47 |
| Msa0477630 | Msa0785240 | 0.803922 | 2.765921e-49 | -8.615850e-47 |
| Msa0272260 | Msa0785240 | 0.805914 | 1.060465e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0785240 | MtrunA17_Chr5g0436141 | 83.429 | 525 | 28 | 6 | 1 | 469 | 1 | 522 | 0.0 | 808 |
| Msa0785240 | MtrunA17_Chr3g0112731 | 57.961 | 559 | 133 | 16 | 1 | 469 | 1 | 547 | 0.0 | 555 |
| Msa0785240 | MtrunA17_Chr7g0240501 | 55.000 | 440 | 135 | 7 | 84 | 466 | 186 | 619 | 7.40e-160 | 467 |
| Msa0785240 | MtrunA17_Chr4g0008771 | 52.570 | 428 | 148 | 7 | 42 | 416 | 54 | 479 | 9.07e-140 | 412 |
| Msa0785240 | MtrunA17_Chr4g0038651 | 46.411 | 418 | 160 | 8 | 84 | 440 | 89 | 503 | 7.12e-111 | 338 |
| Msa0785240 | MtrunA17_Chr8g0348921 | 46.361 | 371 | 133 | 6 | 84 | 392 | 99 | 465 | 1.09e-93 | 291 |
| Msa0785240 | MtrunA17_Chr6g0485861 | 42.632 | 380 | 157 | 8 | 84 | 411 | 98 | 468 | 2.75e-92 | 290 |
| Msa0785240 | MtrunA17_Chr4g0004771 | 43.417 | 357 | 150 | 7 | 84 | 397 | 92 | 439 | 3.12e-90 | 285 |
| Msa0785240 | MtrunA17_Chr2g0331631 | 42.938 | 354 | 148 | 7 | 84 | 392 | 88 | 432 | 1.23e-86 | 275 |
| Msa0785240 | MtrunA17_Chr5g0408591 | 40.220 | 363 | 170 | 5 | 75 | 392 | 111 | 471 | 4.40e-75 | 246 |
| Msa0785240 | MtrunA17_Chr7g0247761 | 53.704 | 216 | 84 | 1 | 84 | 283 | 115 | 330 | 2.06e-65 | 219 |
| Msa0785240 | MtrunA17_Chr7g0247761 | 47.482 | 139 | 51 | 3 | 272 | 392 | 390 | 524 | 2.10e-26 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0785240 | AT5G02010.1 | 54.779 | 429 | 131 | 9 | 63 | 439 | 52 | 469 | 8.60e-150 | 438 |
| Msa0785240 | AT5G05940.1 | 51.745 | 487 | 164 | 15 | 42 | 463 | 63 | 543 | 1.85e-148 | 437 |
| Msa0785240 | AT5G05940.2 | 54.593 | 381 | 124 | 8 | 42 | 378 | 63 | 438 | 5.55e-130 | 385 |
| Msa0785240 | AT3G55660.1 | 45.000 | 500 | 182 | 14 | 42 | 458 | 71 | 560 | 4.22e-118 | 358 |
| Msa0785240 | AT4G38430.1 | 47.319 | 429 | 157 | 10 | 67 | 438 | 80 | 496 | 5.70e-114 | 347 |
| Msa0785240 | AT3G55660.2 | 51.724 | 377 | 129 | 10 | 42 | 375 | 71 | 437 | 4.22e-113 | 340 |
| Msa0785240 | AT4G00460.2 | 47.120 | 382 | 142 | 5 | 74 | 399 | 96 | 473 | 8.69e-103 | 315 |
| Msa0785240 | AT4G00460.4 | 47.120 | 382 | 142 | 5 | 74 | 399 | 96 | 473 | 8.69e-103 | 315 |
| Msa0785240 | AT1G01700.1 | 48.219 | 365 | 129 | 5 | 84 | 392 | 118 | 478 | 1.40e-99 | 307 |
| Msa0785240 | AT1G01700.4 | 44.279 | 402 | 134 | 6 | 77 | 392 | 111 | 508 | 3.50e-93 | 292 |
| Msa0785240 | AT1G01700.3 | 47.839 | 347 | 129 | 5 | 77 | 375 | 111 | 453 | 4.07e-91 | 285 |
| Msa0785240 | AT3G24620.1 | 43.575 | 358 | 143 | 6 | 84 | 394 | 87 | 432 | 3.28e-90 | 284 |
| Msa0785240 | AT1G79860.1 | 42.857 | 350 | 152 | 7 | 84 | 392 | 94 | 436 | 2.37e-87 | 276 |
| Msa0785240 | AT2G45890.1 | 42.667 | 375 | 149 | 8 | 84 | 399 | 95 | 462 | 1.26e-86 | 273 |
| Msa0785240 | AT4G13240.1 | 42.135 | 356 | 155 | 5 | 84 | 396 | 76 | 423 | 1.40e-85 | 272 |
| Msa0785240 | AT1G52240.1 | 43.220 | 354 | 153 | 6 | 84 | 397 | 106 | 451 | 2.20e-85 | 272 |
| Msa0785240 | AT3G16130.1 | 42.179 | 358 | 156 | 5 | 84 | 397 | 92 | 442 | 3.04e-81 | 261 |
| Msa0785240 | AT4G00460.3 | 43.620 | 337 | 130 | 5 | 119 | 399 | 8 | 340 | 6.14e-81 | 254 |
| Msa0785240 | AT5G19560.1 | 40.169 | 356 | 164 | 6 | 84 | 396 | 46 | 395 | 2.96e-75 | 244 |
| Msa0785240 | AT5G19560.5 | 40.169 | 356 | 164 | 6 | 84 | 396 | 46 | 395 | 2.96e-75 | 244 |
| Msa0785240 | AT5G19560.4 | 40.169 | 356 | 164 | 6 | 84 | 396 | 65 | 414 | 5.01e-75 | 244 |
| Msa0785240 | AT5G19560.2 | 42.188 | 320 | 151 | 5 | 84 | 375 | 65 | 378 | 2.82e-74 | 238 |
| Msa0785240 | AT4G00460.1 | 52.679 | 224 | 87 | 1 | 74 | 278 | 96 | 319 | 5.39e-69 | 223 |
| Msa0785240 | AT1G01700.5 | 51.570 | 223 | 89 | 1 | 77 | 280 | 111 | 333 | 2.66e-66 | 218 |
| Msa0785240 | AT1G01700.2 | 51.570 | 223 | 89 | 1 | 77 | 280 | 111 | 333 | 2.66e-66 | 218 |
| Msa0785240 | AT1G31650.2 | 36.872 | 358 | 178 | 6 | 84 | 395 | 110 | 465 | 9.27e-66 | 221 |
| Msa0785240 | AT1G31650.1 | 36.872 | 358 | 178 | 6 | 84 | 395 | 138 | 493 | 2.66e-65 | 221 |
| Msa0785240 | AT5G19560.3 | 34.831 | 267 | 125 | 6 | 173 | 396 | 5 | 265 | 4.71e-38 | 142 |
Find 100 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATGGCTGCTTTCAGTATT+TGG | 0.134248 | 5_2:-70146326 | None:intergenic |
| TAACATGGTTTCACAGAAAA+AGG | 0.190047 | 5_2:+70147467 | Msa0785240:CDS |
| TTCATCTGATTTGCTGCATT+TGG | 0.225466 | 5_2:-70144808 | None:intergenic |
| GGAAGTTCCCGAGTCGTATT+TGG | 0.241485 | 5_2:+70146377 | Msa0785240:CDS |
| GGTCTTCTTCATTTCCTATT+AGG | 0.245693 | 5_2:+70144772 | Msa0785240:CDS |
| ACTCAACACAAAGCAAAATT+TGG | 0.247443 | 5_2:+70147522 | Msa0785240:CDS |
| CAACATGTAGGAACTGTATT+TGG | 0.265120 | 5_2:+70145290 | Msa0785240:intron |
| TTGTTGAGTTAATGCCTTCT+TGG | 0.293497 | 5_2:+70145402 | Msa0785240:CDS |
| TTGTTATTGTTGTGGATAAA+AGG | 0.311337 | 5_2:-70147600 | None:intergenic |
| GAACTGTATTTGGACAATTA+TGG | 0.318046 | 5_2:+70145300 | Msa0785240:CDS |
| TGGAAATCTATCTGAATGTT+TGG | 0.339488 | 5_2:-70147430 | None:intergenic |
| GACATAGTGCCCTTCCTAAT+AGG | 0.352007 | 5_2:-70144786 | None:intergenic |
| TTCATTGAAGCAGCGCTTCC+CGG | 0.357161 | 5_2:+70146888 | Msa0785240:CDS |
| TTATCATCAACTTGAGAAAC+AGG | 0.378270 | 5_2:-70144843 | None:intergenic |
| AGAAAAGTGGCAGAGAGAAA+TGG | 0.381993 | 5_2:+70145352 | Msa0785240:CDS |
| GCAGGAGGCACACGGGGTAC+TGG | 0.394761 | 5_2:-70146249 | None:intergenic |
| TTTGTTACTCAAAACACAAA+AGG | 0.406060 | 5_2:-70144614 | None:intergenic |
| CTGATTTCTCTTGCGAAAAG+AGG | 0.416366 | 5_2:-70146201 | None:intergenic |
| CTCAAGTGCAACATGCTCAT+TGG | 0.420115 | 5_2:-70146692 | None:intergenic |
| GGACATTGTGAAGGACTTCA+TGG | 0.423504 | 5_2:+70146813 | Msa0785240:CDS |
| CATAAATTGCGGCTTCTAAA+CGG | 0.424426 | 5_2:-70146723 | None:intergenic |
| CCCTTTGAAGGACTAATTAG+TGG | 0.432878 | 5_2:-70147567 | None:intergenic |
| GTGAAGGACTTCATGGTTGA+TGG | 0.439958 | 5_2:+70146820 | Msa0785240:CDS |
| GGAGTTACCTCTCCCTTTGA+AGG | 0.445840 | 5_2:-70147579 | None:intergenic |
| TCAGGATATGTTTGCCAAGA+AGG | 0.453625 | 5_2:-70145416 | None:intergenic |
| TAAACCTCAACGTCGTGGTT+TGG | 0.455257 | 5_2:+70147632 | Msa0785240:CDS |
| GAGGCTGATCCATCTGCATC+TGG | 0.467719 | 5_2:-70146182 | None:intergenic |
| AGCATGAAACCTTGTTGCAT+TGG | 0.469347 | 5_2:-70146945 | None:intergenic |
| TCATTGAAGCAGCGCTTCCC+GGG | 0.475313 | 5_2:+70146889 | Msa0785240:CDS |
| CTGCTTGGTGAAGATATGTC+AGG | 0.475560 | 5_2:+70145080 | Msa0785240:CDS |
| ATCAGGAGGGGATATGATGA+AGG | 0.476878 | 5_2:+70145040 | Msa0785240:CDS |
| CAGCATTGCTTTAGATGACA+TGG | 0.484744 | 5_2:+70146356 | Msa0785240:CDS |
| TTCTTCATTTCCTATTAGGA+AGG | 0.485913 | 5_2:+70144776 | Msa0785240:CDS |
| AATGGGTCTTGTAGTTCCAC+TGG | 0.490578 | 5_2:+70144705 | Msa0785240:CDS |
| GTTCGACTACAAAGTCATCC+TGG | 0.490964 | 5_2:+70146791 | Msa0785240:CDS |
| GGTGAAGATATGTCAGGGTC+TGG | 0.491025 | 5_2:+70145086 | Msa0785240:CDS |
| ATCAGCGGCAAGAGGAGAAG+TGG | 0.494704 | 5_2:+70146219 | Msa0785240:CDS |
| TTGTTACTCAAAACACAAAA+GGG | 0.498312 | 5_2:-70144613 | None:intergenic |
| GTACCCCGTGTGCCTCCTGC+CGG | 0.499229 | 5_2:+70146252 | Msa0785240:CDS |
| TTGTCGAGTTTACGTAGAGC+TGG | 0.504038 | 5_2:-70145997 | None:intergenic |
| TAGATTTCCATTGGCACCAA+TGG | 0.506196 | 5_2:+70147443 | Msa0785240:CDS |
| TGATATTGTTGTTATTGTTG+TGG | 0.506831 | 5_2:-70147608 | None:intergenic |
| GTATTTGGATACCCTTCCTA+AGG | 0.508742 | 5_2:+70146392 | Msa0785240:CDS |
| ATGTTAACCATTGGTGCCAA+TGG | 0.513125 | 5_2:-70147450 | None:intergenic |
| GATATGTCAGGGTCTGGAAA+AGG | 0.513629 | 5_2:+70145092 | Msa0785240:CDS |
| ACATTCAGATAGATTTCCAT+TGG | 0.519216 | 5_2:+70147434 | Msa0785240:CDS |
| ACCTCTAGCTTACTACCATC+AGG | 0.519299 | 5_2:-70145434 | None:intergenic |
| TCTTGAGTTCTCACTGAGAC+CGG | 0.521027 | 5_2:-70146271 | None:intergenic |
| ATGTAGTTTGACTTAAACCC+GGG | 0.524605 | 5_2:-70146906 | None:intergenic |
| TGGAAAATCAAACCTTAGGA+AGG | 0.525020 | 5_2:-70146404 | None:intergenic |
| GAGTTCTCACTGAGACCGGC+AGG | 0.534877 | 5_2:-70146267 | None:intergenic |
| GCCACTAATTAGTCCTTCAA+AGG | 0.542594 | 5_2:+70147566 | Msa0785240:CDS |
| ATGGATTGGCTTCTTTGTGT+TGG | 0.544302 | 5_2:+70145371 | Msa0785240:CDS |
| TCTTCATTTCCTATTAGGAA+GGG | 0.555428 | 5_2:+70144777 | Msa0785240:CDS |
| ACTTTGTAGTCGAACGGCTA+GGG | 0.555981 | 5_2:-70146783 | None:intergenic |
| CCACTAATTAGTCCTTCAAA+GGG | 0.557284 | 5_2:+70147567 | Msa0785240:CDS |
| AATTAGTCCTTCAAAGGGAG+AGG | 0.557362 | 5_2:+70147572 | Msa0785240:CDS |
| GAAGTCCTTCACAATGTCCC+AGG | 0.565686 | 5_2:-70146809 | None:intergenic |
| GACTTTGTAGTCGAACGGCT+AGG | 0.567248 | 5_2:-70146784 | None:intergenic |
| AAAAGGAGTTAGCACTGCAT+TGG | 0.568507 | 5_2:+70145109 | Msa0785240:CDS |
| AGTGGCAGAGAGAAATGGAT+TGG | 0.572062 | 5_2:+70145357 | Msa0785240:CDS |
| GGGTTTAAGTCAAACTACAT+TGG | 0.572158 | 5_2:+70146909 | Msa0785240:CDS |
| TGACTTTGTAGGATCAGGAG+GGG | 0.572490 | 5_2:+70145028 | Msa0785240:intron |
| GAAGGACTAATTAGTGGCAC+AGG | 0.574721 | 5_2:-70147561 | None:intergenic |
| TGAGACCGGCAGGAGGCACA+CGG | 0.577679 | 5_2:-70146257 | None:intergenic |
| CATGTGAAAAGAAAGAAAAG+TGG | 0.581474 | 5_2:+70145339 | Msa0785240:CDS |
| AGGTTTGCGAAGTTACTGCT+TGG | 0.585242 | 5_2:+70145065 | Msa0785240:CDS |
| TTCGACTACAAAGTCATCCT+GGG | 0.585548 | 5_2:+70146792 | Msa0785240:CDS |
| TTTGACTTTGTAGGATCAGG+AGG | 0.593537 | 5_2:+70145026 | Msa0785240:intron |
| TGTGAAACCATGTTAACCAT+TGG | 0.593683 | 5_2:-70147459 | None:intergenic |
| TACACCAAACCACGACGTTG+AGG | 0.594949 | 5_2:-70147636 | None:intergenic |
| ATTGGCACCAATGGTTAACA+TGG | 0.597219 | 5_2:+70147452 | Msa0785240:CDS |
| GAGACCGGCAGGAGGCACAC+GGG | 0.597490 | 5_2:-70146256 | None:intergenic |
| CAAGAGAAATCAGCGGCAAG+AGG | 0.598859 | 5_2:+70146211 | Msa0785240:CDS |
| AATGCTATTACTAATTTGTG+TGG | 0.601531 | 5_2:+70145140 | Msa0785240:CDS |
| GTATGTTGACCAAGGAATTG+TGG | 0.604214 | 5_2:+70146157 | Msa0785240:intron |
| GAGGGGATATGATGAAGGAA+AGG | 0.608465 | 5_2:+70145045 | Msa0785240:CDS |
| AGTGGCACAGGTGAATAACT+AGG | 0.609813 | 5_2:-70147549 | None:intergenic |
| TTGACTTTGTAGGATCAGGA+GGG | 0.610216 | 5_2:+70145027 | Msa0785240:intron |
| AATGTAGTTTGACTTAAACC+CGG | 0.610470 | 5_2:-70146907 | None:intergenic |
| GTCATCCTGGGACATTGTGA+AGG | 0.614434 | 5_2:+70146804 | Msa0785240:CDS |
| ATCATTAAACCTCAACGTCG+TGG | 0.615061 | 5_2:+70147627 | Msa0785240:CDS |
| TCAGCGGCAAGAGGAGAAGT+GGG | 0.616716 | 5_2:+70146220 | Msa0785240:CDS |
| TGCTTGGTGAAGATATGTCA+GGG | 0.618748 | 5_2:+70145081 | Msa0785240:CDS |
| AGCAATGCTGTTGATAGACA+TGG | 0.626027 | 5_2:-70146343 | None:intergenic |
| CTGGCGCCATACATAAATTG+CGG | 0.627878 | 5_2:-70146734 | None:intergenic |
| TCCTGATGGTAGTAAGCTAG+AGG | 0.628089 | 5_2:+70145433 | Msa0785240:CDS |
| TCTTGGCAAACATATCCTGA+TGG | 0.629177 | 5_2:+70145419 | Msa0785240:CDS |
| AGGATGACTTTGTAGTCGAA+CGG | 0.629366 | 5_2:-70146789 | None:intergenic |
| AAGGGTATCCAAATACGACT+CGG | 0.630421 | 5_2:-70146385 | None:intergenic |
| GGAAAATCAAACCTTAGGAA+GGG | 0.632917 | 5_2:-70146403 | None:intergenic |
| GTCGAACGGCTAGGGTAGAG+TGG | 0.635637 | 5_2:-70146775 | None:intergenic |
| ATCTGAGCAACACGATCCAG+TGG | 0.638385 | 5_2:-70144721 | None:intergenic |
| AGGGTATCCAAATACGACTC+GGG | 0.638687 | 5_2:-70146384 | None:intergenic |
| AGACCGGCAGGAGGCACACG+GGG | 0.642385 | 5_2:-70146255 | None:intergenic |
| ATTGTGGCACCAGATGCAGA+TGG | 0.645033 | 5_2:+70146173 | Msa0785240:CDS |
| TAGCAAGATCCAATGCAACA+AGG | 0.662550 | 5_2:+70146936 | Msa0785240:CDS |
| TTCTCACTGAGACCGGCAGG+AGG | 0.665518 | 5_2:-70146264 | None:intergenic |
| GCGGCAAGAGGAGAAGTGGG+TGG | 0.694550 | 5_2:+70146223 | Msa0785240:CDS |
| GAACGGCTAGGGTAGAGTGG+CGG | 0.720727 | 5_2:-70146772 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTGGTAAAAA+TGG | + | chr5_2:70144641-70144660 | Msa0785240:exon | 10.0% |
| !!! | TTATTTTATCTTTCTATAAA+TGG | + | chr5_2:70147160-70147179 | Msa0785240:intron | 10.0% |
| !! | TTTAGATAAACAATTTAATT+AGG | - | chr5_2:70147259-70147278 | None:intergenic | 10.0% |
| !!! | ACAAAGTCAATTTTTTTTTT+TGG | + | chr5_2:70144632-70144651 | Msa0785240:five_prime_UTR | 15.0% |
| !! | ACATTAAATTCACATATATA+AGG | - | chr5_2:70145480-70145499 | None:intergenic | 15.0% |
| !! | TTCAACAAAGATTAATAAAT+AGG | + | chr5_2:70145504-70145523 | Msa0785240:intron | 15.0% |
| !!! | TTTTTTTTTGGTAAAAATGG+AGG | + | chr5_2:70144644-70144663 | Msa0785240:exon | 20.0% |
| !!! | AATTTTCAGAAGAGAAAAAA+TGG | + | chr5_2:70144687-70144706 | Msa0785240:CDS | 20.0% |
| !!! | ATTTTCAGAAGAGAAAAAAT+GGG | + | chr5_2:70144688-70144707 | Msa0785240:CDS | 20.0% |
| !! | TACAAAGTCAAAACATAATA+AGG | - | chr5_2:70145018-70145037 | None:intergenic | 20.0% |
| !!! | TTATTATGTTTTGACTTTGT+AGG | + | chr5_2:70145017-70145036 | Msa0785240:intron | 20.0% |
| !!! | TTTCTTACAATTTGTTCAAT+TGG | + | chr5_2:70145258-70145277 | Msa0785240:intron | 20.0% |
| !!! | TTCTTACAATTTGTTCAATT+GGG | + | chr5_2:70145259-70145278 | Msa0785240:intron | 20.0% |
| !!! | ATTTTTTATTCTTCCAATGT+AGG | + | chr5_2:70146041-70146060 | Msa0785240:intron | 20.0% |
| !! | ATTGTTGATACTATATAATC+TGG | + | chr5_2:70146495-70146514 | Msa0785240:intron | 20.0% |
| !!! | TGTTTCATTTTAAACATTTC+AGG | + | chr5_2:70147305-70147324 | Msa0785240:intron | 20.0% |
| ! | TTGTTACTCAAAACACAAAA+GGG | - | chr5_2:70144616-70144635 | None:intergenic | 25.0% |
| ! | TTTGTTACTCAAAACACAAA+AGG | - | chr5_2:70144617-70144636 | None:intergenic | 25.0% |
| !! | AATGCTATTACTAATTTGTG+TGG | + | chr5_2:70145140-70145159 | Msa0785240:CDS | 25.0% |
| !! | TATTACTAATTTGTGTGGTA+TGG | + | chr5_2:70145145-70145164 | Msa0785240:intron | 25.0% |
| !! | TTGTAACACATATTGATAGT+AGG | + | chr5_2:70145174-70145193 | Msa0785240:intron | 25.0% |
| !!! | GTTAACTTTTTCTTGTGTTA+TGG | + | chr5_2:70145219-70145238 | Msa0785240:intron | 25.0% |
| ! | TTCGTTTGATTGAAATAGAA+CGG | + | chr5_2:70145589-70145608 | Msa0785240:intron | 25.0% |
| !!! | CAAATTTCGAGTTTTCAATT+TGG | - | chr5_2:70145802-70145821 | None:intergenic | 25.0% |
| ! | TTGATAAAAATGTCTGATCT+TGG | - | chr5_2:70145973-70145992 | None:intergenic | 25.0% |
| ! | CTAAAATTTCCTGTTACATA+GGG | - | chr5_2:70146112-70146131 | None:intergenic | 25.0% |
| !! | TCTAAAATTTCCTGTTACAT+AGG | - | chr5_2:70146113-70146132 | None:intergenic | 25.0% |
| ! | AAATAAGCTGAAATGGTTTA+TGG | - | chr5_2:70147078-70147097 | None:intergenic | 25.0% |
| ! | CTTATGAAAATAAGCTGAAA+TGG | - | chr5_2:70147085-70147104 | None:intergenic | 25.0% |
| !!! | GCTGTTTTTGTAAGTTATTT+GGG | - | chr5_2:70147112-70147131 | None:intergenic | 25.0% |
| !!! | AGCTGTTTTTGTAAGTTATT+TGG | - | chr5_2:70147113-70147132 | None:intergenic | 25.0% |
| ! | AGCAAAACTAATTTCACATT+AGG | - | chr5_2:70147140-70147159 | None:intergenic | 25.0% |
| !!! | ATGTTAATATGAAGTTGGTA+GGG | - | chr5_2:70147286-70147305 | None:intergenic | 25.0% |
| ! | GAAACATGTTAATATGAAGT+TGG | - | chr5_2:70147291-70147310 | None:intergenic | 25.0% |
| !! | TTTTAAACATTTCAGGATGT+TGG | + | chr5_2:70147312-70147331 | Msa0785240:intron | 25.0% |
| !! | TTGTTATTGTTGTGGATAAA+AGG | - | chr5_2:70147603-70147622 | None:intergenic | 25.0% |
| !! | TGATATTGTTGTTATTGTTG+TGG | - | chr5_2:70147611-70147630 | None:intergenic | 25.0% |
| AACAAGCAAAAAATGCAAGA+GGG | + | chr5_2:70144751-70144770 | Msa0785240:CDS | 30.0% | |
| TTCTTCATTTCCTATTAGGA+AGG | + | chr5_2:70144776-70144795 | Msa0785240:CDS | 30.0% | |
| TCTTCATTTCCTATTAGGAA+GGG | + | chr5_2:70144777-70144796 | Msa0785240:CDS | 30.0% | |
| TTATCATCAACTTGAGAAAC+AGG | - | chr5_2:70144846-70144865 | None:intergenic | 30.0% | |
| AGTATCAGCTCAAAAATTTC+TGG | + | chr5_2:70144876-70144895 | Msa0785240:CDS | 30.0% | |
| TTCTGTTCTGTTTAGTGTTT+AGG | + | chr5_2:70144921-70144940 | Msa0785240:intron | 30.0% | |
| GAACTGTATTTGGACAATTA+TGG | + | chr5_2:70145300-70145319 | Msa0785240:CDS | 30.0% | |
| ! | CACTTTTCTTTCTTTTCACA+TGG | - | chr5_2:70145341-70145360 | None:intergenic | 30.0% |
| CATGTGAAAAGAAAGAAAAG+TGG | + | chr5_2:70145339-70145358 | Msa0785240:CDS | 30.0% | |
| ATCATACAAAGTAGAGAGTA+GGG | - | chr5_2:70145530-70145549 | None:intergenic | 30.0% | |
| AATCATACAAAGTAGAGAGT+AGG | - | chr5_2:70145531-70145550 | None:intergenic | 30.0% | |
| ACTCTCTACTTTGTATGATT+AGG | + | chr5_2:70145531-70145550 | Msa0785240:intron | 30.0% | |
| CTCTCTACTTTGTATGATTA+GGG | + | chr5_2:70145532-70145551 | Msa0785240:intron | 30.0% | |
| AACGGTCTATATTTCATGTT+TGG | + | chr5_2:70145607-70145626 | Msa0785240:intron | 30.0% | |
| TTGATCAAAATCAGATGACT+CGG | + | chr5_2:70145657-70145676 | Msa0785240:intron | 30.0% | |
| CTGAACAGCTAAATAGAAAT+TGG | + | chr5_2:70145755-70145774 | Msa0785240:intron | 30.0% | |
| TATGTGGAAAATCAAACCTT+AGG | - | chr5_2:70146411-70146430 | None:intergenic | 30.0% | |
| ! | AAGATCTCAATCGATTTATG+TGG | - | chr5_2:70146427-70146446 | None:intergenic | 30.0% |
| TGATACATGATAGAACGTTA+TGG | + | chr5_2:70146527-70146546 | Msa0785240:intron | 30.0% | |
| AAGTTCAAACAACGTATCAT+GGG | - | chr5_2:70146577-70146596 | None:intergenic | 30.0% | |
| AAAGTTCAAACAACGTATCA+TGG | - | chr5_2:70146578-70146597 | None:intergenic | 30.0% | |
| ! | AATGTAGTTTGACTTAAACC+CGG | - | chr5_2:70146910-70146929 | None:intergenic | 30.0% |
| ATTGTATCATCAACAGATCT+TGG | + | chr5_2:70147023-70147042 | Msa0785240:intron | 30.0% | |
| ! | CATGTTAATATGAAGTTGGT+AGG | - | chr5_2:70147287-70147306 | None:intergenic | 30.0% |
| ! | TCTTGAATAGCTTTCTAGTA+TGG | - | chr5_2:70147343-70147362 | None:intergenic | 30.0% |
| ! | AGAAAGCTATTCAAGAGTTT+TGG | + | chr5_2:70147347-70147366 | Msa0785240:intron | 30.0% |
| TGGAAATCTATCTGAATGTT+TGG | - | chr5_2:70147433-70147452 | None:intergenic | 30.0% | |
| ACATTCAGATAGATTTCCAT+TGG | + | chr5_2:70147434-70147453 | Msa0785240:CDS | 30.0% | |
| TAACATGGTTTCACAGAAAA+AGG | + | chr5_2:70147467-70147486 | Msa0785240:CDS | 30.0% | |
| ACTCAACACAAAGCAAAATT+TGG | + | chr5_2:70147522-70147541 | Msa0785240:CDS | 30.0% | |
| GAACAAGCAAAAAATGCAAG+AGG | + | chr5_2:70144750-70144769 | Msa0785240:CDS | 35.0% | |
| GGTCTTCTTCATTTCCTATT+AGG | + | chr5_2:70144772-70144791 | Msa0785240:CDS | 35.0% | |
| !! | TTCATCTGATTTGCTGCATT+TGG | - | chr5_2:70144811-70144830 | None:intergenic | 35.0% |
| ACACTAAACAGAACAGAACA+TGG | - | chr5_2:70144919-70144938 | None:intergenic | 35.0% | |
| !!! | TGTTTTGACTTTGTAGGATC+AGG | + | chr5_2:70145023-70145042 | Msa0785240:intron | 35.0% |
| CAACATGTAGGAACTGTATT+TGG | + | chr5_2:70145290-70145309 | Msa0785240:intron | 35.0% | |
| ! | TCTTTCTTTTCACATGGTAC+AGG | - | chr5_2:70145335-70145354 | None:intergenic | 35.0% |
| TTGTTGAGTTAATGCCTTCT+TGG | + | chr5_2:70145402-70145421 | Msa0785240:CDS | 35.0% | |
| TAAATTGAGTCCCTGGTTAT+AGG | - | chr5_2:70145688-70145707 | None:intergenic | 35.0% | |
| ! | ACCTGCTGTCAAATTTTCAT+TGG | + | chr5_2:70145707-70145726 | Msa0785240:intron | 35.0% |
| ACCAATGAAAATTTGACAGC+AGG | - | chr5_2:70145711-70145730 | None:intergenic | 35.0% | |
| ATTTAGCTGTTCAGATAGAC+TGG | - | chr5_2:70145749-70145768 | None:intergenic | 35.0% | |
| GGTAGTAGTAGTACTAGTAA+GGG | - | chr5_2:70145855-70145874 | None:intergenic | 35.0% | |
| AGGTAGTAGTAGTACTAGTA+AGG | - | chr5_2:70145856-70145875 | None:intergenic | 35.0% | |
| ! | CTACTACTACCTTTGATAGT+AGG | + | chr5_2:70145864-70145883 | Msa0785240:intron | 35.0% |
| TCCGTGTGCATATATTTAGT+AGG | + | chr5_2:70145890-70145909 | Msa0785240:intron | 35.0% | |
| CCCTACTAAATATATGCACA+CGG | - | chr5_2:70145894-70145913 | None:intergenic | 35.0% | |
| CCGTGTGCATATATTTAGTA+GGG | + | chr5_2:70145891-70145910 | Msa0785240:intron | 35.0% | |
| ! | TACACTTTTCCCTATGTAAC+AGG | + | chr5_2:70146100-70146119 | Msa0785240:intron | 35.0% |
| TTTAGATAGTTGCACTGCTA+TGG | + | chr5_2:70146127-70146146 | Msa0785240:intron | 35.0% | |
| GGAAAATCAAACCTTAGGAA+GGG | - | chr5_2:70146406-70146425 | None:intergenic | 35.0% | |
| TGGAAAATCAAACCTTAGGA+AGG | - | chr5_2:70146407-70146426 | None:intergenic | 35.0% | |
| CGTTGTTTGAACTTTCAGAA+TGG | + | chr5_2:70146583-70146602 | Msa0785240:intron | 35.0% | |
| CATAAATTGCGGCTTCTAAA+CGG | - | chr5_2:70146726-70146745 | None:intergenic | 35.0% | |
| TAGAAGCCGCAATTTATGTA+TGG | + | chr5_2:70146728-70146747 | Msa0785240:intron | 35.0% | |
| ! | ATGTAGTTTGACTTAAACCC+GGG | - | chr5_2:70146909-70146928 | None:intergenic | 35.0% |
| GGGTTTAAGTCAAACTACAT+TGG | + | chr5_2:70146909-70146928 | Msa0785240:CDS | 35.0% | |
| TGTGAAACCATGTTAACCAT+TGG | - | chr5_2:70147462-70147481 | None:intergenic | 35.0% | |
| CCACTAATTAGTCCTTCAAA+GGG | + | chr5_2:70147567-70147586 | Msa0785240:CDS | 35.0% | |
| ! | TTTGACTTTGTAGGATCAGG+AGG | + | chr5_2:70145026-70145045 | Msa0785240:intron | 40.0% |
| TTGACTTTGTAGGATCAGGA+GGG | + | chr5_2:70145027-70145046 | Msa0785240:intron | 40.0% | |
| ! | TGCTTGGTGAAGATATGTCA+GGG | + | chr5_2:70145081-70145100 | Msa0785240:CDS | 40.0% |
| AAAAGGAGTTAGCACTGCAT+TGG | + | chr5_2:70145109-70145128 | Msa0785240:CDS | 40.0% | |
| !! | TGGGATTTGTTGCAACATGT+AGG | + | chr5_2:70145278-70145297 | Msa0785240:intron | 40.0% |
| AGAAAAGTGGCAGAGAGAAA+TGG | + | chr5_2:70145352-70145371 | Msa0785240:CDS | 40.0% | |
| !! | ATGGATTGGCTTCTTTGTGT+TGG | + | chr5_2:70145371-70145390 | Msa0785240:CDS | 40.0% |
| TCAGGATATGTTTGCCAAGA+AGG | - | chr5_2:70145419-70145438 | None:intergenic | 40.0% | |
| TCTTGGCAAACATATCCTGA+TGG | + | chr5_2:70145419-70145438 | Msa0785240:CDS | 40.0% | |
| TTGTAGTCATGTCAACGCAT+TGG | + | chr5_2:70145559-70145578 | Msa0785240:intron | 40.0% | |
| ! | ACTCGGATTTTCCTATAACC+AGG | + | chr5_2:70145674-70145693 | Msa0785240:intron | 40.0% |
| ! | CTCGGATTTTCCTATAACCA+GGG | + | chr5_2:70145675-70145694 | Msa0785240:intron | 40.0% |
| GTAGTACTAGTAAGGGATCT+CGG | - | chr5_2:70145848-70145867 | None:intergenic | 40.0% | |
| TCTAACATGTTCTGTTCTGC+AGG | + | chr5_2:70145933-70145952 | Msa0785240:intron | 40.0% | |
| ! | TTCCAATGTAGGCTAGTTCT+TGG | + | chr5_2:70146052-70146071 | Msa0785240:intron | 40.0% |
| ! | TACCAAGAACTAGCCTACAT+TGG | - | chr5_2:70146057-70146076 | None:intergenic | 40.0% |
| !! | GAGTTTTGGTATGTTGACCA+AGG | + | chr5_2:70146149-70146168 | Msa0785240:intron | 40.0% |
| GTATGTTGACCAAGGAATTG+TGG | + | chr5_2:70146157-70146176 | Msa0785240:intron | 40.0% | |
| CTGATTTCTCTTGCGAAAAG+AGG | - | chr5_2:70146204-70146223 | None:intergenic | 40.0% | |
| ! | CTTTTCGCAAGAGAAATCAG+CGG | + | chr5_2:70146204-70146223 | Msa0785240:CDS | 40.0% |
| ! | ACATGGCTGCTTTCAGTATT+TGG | - | chr5_2:70146329-70146348 | None:intergenic | 40.0% |
| ! | AGCAATGCTGTTGATAGACA+TGG | - | chr5_2:70146346-70146365 | None:intergenic | 40.0% |
| ! | CAGCATTGCTTTAGATGACA+TGG | + | chr5_2:70146356-70146375 | Msa0785240:CDS | 40.0% |
| !! | AAGGGTATCCAAATACGACT+CGG | - | chr5_2:70146388-70146407 | None:intergenic | 40.0% |
| GTATTTGGATACCCTTCCTA+AGG | + | chr5_2:70146392-70146411 | Msa0785240:CDS | 40.0% | |
| AGGATGACTTTGTAGTCGAA+CGG | - | chr5_2:70146792-70146811 | None:intergenic | 40.0% | |
| TTCGACTACAAAGTCATCCT+GGG | + | chr5_2:70146792-70146811 | Msa0785240:CDS | 40.0% | |
| TAGCAAGATCCAATGCAACA+AGG | + | chr5_2:70146936-70146955 | Msa0785240:CDS | 40.0% | |
| AGCATGAAACCTTGTTGCAT+TGG | - | chr5_2:70146948-70146967 | None:intergenic | 40.0% | |
| TAGATTTCCATTGGCACCAA+TGG | + | chr5_2:70147443-70147462 | Msa0785240:CDS | 40.0% | |
| !! | ATGTTAACCATTGGTGCCAA+TGG | - | chr5_2:70147453-70147472 | None:intergenic | 40.0% |
| ATTGGCACCAATGGTTAACA+TGG | + | chr5_2:70147452-70147471 | Msa0785240:CDS | 40.0% | |
| GCCACTAATTAGTCCTTCAA+AGG | + | chr5_2:70147566-70147585 | Msa0785240:CDS | 40.0% | |
| ! | CCCTTTGAAGGACTAATTAG+TGG | - | chr5_2:70147570-70147589 | None:intergenic | 40.0% |
| AATTAGTCCTTCAAAGGGAG+AGG | + | chr5_2:70147572-70147591 | Msa0785240:CDS | 40.0% | |
| ATCATTAAACCTCAACGTCG+TGG | + | chr5_2:70147627-70147646 | Msa0785240:CDS | 40.0% | |
| ! | AATGGGTCTTGTAGTTCCAC+TGG | + | chr5_2:70144705-70144724 | Msa0785240:CDS | 45.0% |
| GACATAGTGCCCTTCCTAAT+AGG | - | chr5_2:70144789-70144808 | None:intergenic | 45.0% | |
| TGACTTTGTAGGATCAGGAG+GGG | + | chr5_2:70145028-70145047 | Msa0785240:intron | 45.0% | |
| ATCAGGAGGGGATATGATGA+AGG | + | chr5_2:70145040-70145059 | Msa0785240:CDS | 45.0% | |
| GAGGGGATATGATGAAGGAA+AGG | + | chr5_2:70145045-70145064 | Msa0785240:CDS | 45.0% | |
| AGGTTTGCGAAGTTACTGCT+TGG | + | chr5_2:70145065-70145084 | Msa0785240:CDS | 45.0% | |
| ! | CTGCTTGGTGAAGATATGTC+AGG | + | chr5_2:70145080-70145099 | Msa0785240:CDS | 45.0% |
| GATATGTCAGGGTCTGGAAA+AGG | + | chr5_2:70145092-70145111 | Msa0785240:CDS | 45.0% | |
| AGTGGCAGAGAGAAATGGAT+TGG | + | chr5_2:70145357-70145376 | Msa0785240:CDS | 45.0% | |
| TCCTGATGGTAGTAAGCTAG+AGG | + | chr5_2:70145433-70145452 | Msa0785240:CDS | 45.0% | |
| ! | ACCTCTAGCTTACTACCATC+AGG | - | chr5_2:70145437-70145456 | None:intergenic | 45.0% |
| ! | CACGGATTGCCTACTATCAA+AGG | - | chr5_2:70145876-70145895 | None:intergenic | 45.0% |
| TTGTCGAGTTTACGTAGAGC+TGG | - | chr5_2:70146000-70146019 | None:intergenic | 45.0% | |
| ! | GTTGCACTGCTATGGAGTTT+TGG | + | chr5_2:70146135-70146154 | Msa0785240:intron | 45.0% |
| TCTTGAGTTCTCACTGAGAC+CGG | - | chr5_2:70146274-70146293 | None:intergenic | 45.0% | |
| ! | AGGGTATCCAAATACGACTC+GGG | - | chr5_2:70146387-70146406 | None:intergenic | 45.0% |
| TCAGAATGGAAGAACGTGCT+TGG | + | chr5_2:70146597-70146616 | Msa0785240:intron | 45.0% | |
| CAGAATGGAAGAACGTGCTT+GGG | + | chr5_2:70146598-70146617 | Msa0785240:intron | 45.0% | |
| CTCAAGTGCAACATGCTCAT+TGG | - | chr5_2:70146695-70146714 | None:intergenic | 45.0% | |
| CTGGCGCCATACATAAATTG+CGG | - | chr5_2:70146737-70146756 | None:intergenic | 45.0% | |
| ACTTTGTAGTCGAACGGCTA+GGG | - | chr5_2:70146786-70146805 | None:intergenic | 45.0% | |
| GTTCGACTACAAAGTCATCC+TGG | + | chr5_2:70146791-70146810 | Msa0785240:CDS | 45.0% | |
| GGACATTGTGAAGGACTTCA+TGG | + | chr5_2:70146813-70146832 | Msa0785240:CDS | 45.0% | |
| GTGAAGGACTTCATGGTTGA+TGG | + | chr5_2:70146820-70146839 | Msa0785240:CDS | 45.0% | |
| AGTGGCACAGGTGAATAACT+AGG | - | chr5_2:70147552-70147571 | None:intergenic | 45.0% | |
| GAAGGACTAATTAGTGGCAC+AGG | - | chr5_2:70147564-70147583 | None:intergenic | 45.0% | |
| TAAACCTCAACGTCGTGGTT+TGG | + | chr5_2:70147632-70147651 | Msa0785240:CDS | 45.0% | |
| ATCTGAGCAACACGATCCAG+TGG | - | chr5_2:70144724-70144743 | None:intergenic | 50.0% | |
| GGTGAAGATATGTCAGGGTC+TGG | + | chr5_2:70145086-70145105 | Msa0785240:CDS | 50.0% | |
| CAGCAGGTAAATTGAGTCCC+TGG | - | chr5_2:70145695-70145714 | None:intergenic | 50.0% | |
| !! | CATCTGGTGCCACAATTCCT+TGG | - | chr5_2:70146169-70146188 | None:intergenic | 50.0% |
| ATTGTGGCACCAGATGCAGA+TGG | + | chr5_2:70146173-70146192 | Msa0785240:CDS | 50.0% | |
| CAAGAGAAATCAGCGGCAAG+AGG | + | chr5_2:70146211-70146230 | Msa0785240:CDS | 50.0% | |
| GGAAGTTCCCGAGTCGTATT+TGG | + | chr5_2:70146377-70146396 | Msa0785240:CDS | 50.0% | |
| GCACTCTTGAGAGAACTGGT+CGG | - | chr5_2:70146650-70146669 | None:intergenic | 50.0% | |
| GCAAGCACTCTTGAGAGAAC+TGG | - | chr5_2:70146654-70146673 | None:intergenic | 50.0% | |
| ! | GCGGTTTAGAGTGAGATCTC+TGG | - | chr5_2:70146756-70146775 | None:intergenic | 50.0% |
| GACTTTGTAGTCGAACGGCT+AGG | - | chr5_2:70146787-70146806 | None:intergenic | 50.0% | |
| GTCATCCTGGGACATTGTGA+AGG | + | chr5_2:70146804-70146823 | Msa0785240:CDS | 50.0% | |
| GAAGTCCTTCACAATGTCCC+AGG | - | chr5_2:70146812-70146831 | None:intergenic | 50.0% | |
| TTCATTGAAGCAGCGCTTCC+CGG | + | chr5_2:70146888-70146907 | Msa0785240:CDS | 50.0% | |
| GGAGTTACCTCTCCCTTTGA+AGG | - | chr5_2:70147582-70147601 | None:intergenic | 50.0% | |
| TACACCAAACCACGACGTTG+AGG | - | chr5_2:70147639-70147658 | None:intergenic | 50.0% | |
| GAGGCTGATCCATCTGCATC+TGG | - | chr5_2:70146185-70146204 | None:intergenic | 55.0% | |
| ATCAGCGGCAAGAGGAGAAG+TGG | + | chr5_2:70146219-70146238 | Msa0785240:CDS | 55.0% | |
| TCAGCGGCAAGAGGAGAAGT+GGG | + | chr5_2:70146220-70146239 | Msa0785240:CDS | 55.0% | |
| TCATTGAAGCAGCGCTTCCC+GGG | + | chr5_2:70146889-70146908 | Msa0785240:CDS | 55.0% | |
| TTCTCACTGAGACCGGCAGG+AGG | - | chr5_2:70146267-70146286 | None:intergenic | 60.0% | |
| GAGTTCTCACTGAGACCGGC+AGG | - | chr5_2:70146270-70146289 | None:intergenic | 60.0% | |
| GAACGGCTAGGGTAGAGTGG+CGG | - | chr5_2:70146775-70146794 | None:intergenic | 60.0% | |
| GTCGAACGGCTAGGGTAGAG+TGG | - | chr5_2:70146778-70146797 | None:intergenic | 60.0% | |
| GCGGCAAGAGGAGAAGTGGG+TGG | + | chr5_2:70146223-70146242 | Msa0785240:CDS | 65.0% | |
| ! | TGAGACCGGCAGGAGGCACA+CGG | - | chr5_2:70146260-70146279 | None:intergenic | 65.0% |
| ! | GCAGGAGGCACACGGGGTAC+TGG | - | chr5_2:70146252-70146271 | None:intergenic | 70.0% |
| GTACCCCGTGTGCCTCCTGC+CGG | + | chr5_2:70146252-70146271 | Msa0785240:CDS | 70.0% | |
| ! | AGACCGGCAGGAGGCACACG+GGG | - | chr5_2:70146258-70146277 | None:intergenic | 70.0% |
| ! | GAGACCGGCAGGAGGCACAC+GGG | - | chr5_2:70146259-70146278 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 70144556 | 70147659 | 70144556 | ID=Msa0785240;Name=Msa0785240 |
| chr5_2 | mRNA | 70144556 | 70147659 | 70144556 | ID=Msa0785240-mRNA-1;Parent=Msa0785240;Name=Msa0785240-mRNA-1;_AED=0.20;_eAED=0.21;_QI=104|0.42|0.5|1|0.71|0.62|8|0|470 |
| chr5_2 | exon | 70144556 | 70144897 | 70144556 | ID=Msa0785240-mRNA-1:exon:21120;Parent=Msa0785240-mRNA-1 |
| chr5_2 | exon | 70145039 | 70145161 | 70145039 | ID=Msa0785240-mRNA-1:exon:21121;Parent=Msa0785240-mRNA-1 |
| chr5_2 | exon | 70145300 | 70145454 | 70145300 | ID=Msa0785240-mRNA-1:exon:21122;Parent=Msa0785240-mRNA-1 |
| chr5_2 | exon | 70145955 | 70146029 | 70145955 | ID=Msa0785240-mRNA-1:exon:21123;Parent=Msa0785240-mRNA-1 |
| chr5_2 | exon | 70146171 | 70146413 | 70146171 | ID=Msa0785240-mRNA-1:exon:21124;Parent=Msa0785240-mRNA-1 |
| chr5_2 | exon | 70146655 | 70146744 | 70146655 | ID=Msa0785240-mRNA-1:exon:21125;Parent=Msa0785240-mRNA-1 |
| chr5_2 | exon | 70146757 | 70146957 | 70146757 | ID=Msa0785240-mRNA-1:exon:21126;Parent=Msa0785240-mRNA-1 |
| chr5_2 | exon | 70147372 | 70147659 | 70147372 | ID=Msa0785240-mRNA-1:exon:21127;Parent=Msa0785240-mRNA-1 |
| chr5_2 | five_prime_UTR | 70144556 | 70144659 | 70144556 | ID=Msa0785240-mRNA-1:five_prime_utr;Parent=Msa0785240-mRNA-1 |
| chr5_2 | CDS | 70144660 | 70144897 | 70144660 | ID=Msa0785240-mRNA-1:cds;Parent=Msa0785240-mRNA-1 |
| chr5_2 | CDS | 70145039 | 70145161 | 70145039 | ID=Msa0785240-mRNA-1:cds;Parent=Msa0785240-mRNA-1 |
| chr5_2 | CDS | 70145300 | 70145454 | 70145300 | ID=Msa0785240-mRNA-1:cds;Parent=Msa0785240-mRNA-1 |
| chr5_2 | CDS | 70145955 | 70146029 | 70145955 | ID=Msa0785240-mRNA-1:cds;Parent=Msa0785240-mRNA-1 |
| chr5_2 | CDS | 70146171 | 70146413 | 70146171 | ID=Msa0785240-mRNA-1:cds;Parent=Msa0785240-mRNA-1 |
| chr5_2 | CDS | 70146655 | 70146744 | 70146655 | ID=Msa0785240-mRNA-1:cds;Parent=Msa0785240-mRNA-1 |
| chr5_2 | CDS | 70146757 | 70146957 | 70146757 | ID=Msa0785240-mRNA-1:cds;Parent=Msa0785240-mRNA-1 |
| chr5_2 | CDS | 70147372 | 70147659 | 70147372 | ID=Msa0785240-mRNA-1:cds;Parent=Msa0785240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
