Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0737990 | XP_003616526.1 | 97.049 | 576 | 17 | 0 | 1 | 576 | 1 | 576 | 0.0 | 1163 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0737990 | sp|F4K295|ROGF5_ARATH | 62.327 | 507 | 177 | 10 | 42 | 537 | 63 | 566 | 0.0 | 619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0737990 | F6LPU5 | 97.049 | 576 | 17 | 0 | 1 | 576 | 1 | 576 | 0.0 | 1163 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016040 | Msa0737990 | 0.814162 | 1.773014e-51 | -8.615850e-47 |
| Msa0034210 | Msa0737990 | 0.803112 | 4.071907e-49 | -8.615850e-47 |
| Msa0048510 | Msa0737990 | 0.826271 | 2.972959e-54 | -8.615850e-47 |
| Msa0050660 | Msa0737990 | 0.831532 | 1.582374e-55 | -8.615850e-47 |
| Msa0050700 | Msa0737990 | 0.828489 | 8.737083e-55 | -8.615850e-47 |
| Msa0050790 | Msa0737990 | 0.820453 | 6.806546e-53 | -8.615850e-47 |
| Msa0068150 | Msa0737990 | 0.810066 | 1.386302e-50 | -8.615850e-47 |
| Msa0071860 | Msa0737990 | 0.805741 | 1.153075e-49 | -8.615850e-47 |
| Msa0093860 | Msa0737990 | 0.802155 | 6.417058e-49 | -8.615850e-47 |
| Msa0115550 | Msa0737990 | 0.820468 | 6.751509e-53 | -8.615850e-47 |
| Msa0606100 | Msa0737990 | 0.818329 | 2.075203e-52 | -8.615850e-47 |
| Msa0607800 | Msa0737990 | 0.829299 | 5.564353e-55 | -8.615850e-47 |
| Msa0613630 | Msa0737990 | 0.804676 | 1.926755e-49 | -8.615850e-47 |
| Msa0621710 | Msa0737990 | 0.857413 | 1.660808e-62 | -8.615850e-47 |
| Msa0622920 | Msa0737990 | 0.809666 | 1.690724e-50 | -8.615850e-47 |
| Msa0647050 | Msa0737990 | 0.807223 | 5.612931e-50 | -8.615850e-47 |
| Msa0648040 | Msa0737990 | 0.802317 | 5.941028e-49 | -8.615850e-47 |
| Msa0657700 | Msa0737990 | 0.818414 | 1.985327e-52 | -8.615850e-47 |
| Msa0666700 | Msa0737990 | 0.821675 | 3.558898e-53 | -8.615850e-47 |
| Msa0682770 | Msa0737990 | 0.801513 | 8.689534e-49 | -8.615850e-47 |
| Msa0688910 | Msa0737990 | 0.814288 | 1.662864e-51 | -8.615850e-47 |
| Msa0690740 | Msa0737990 | 0.804543 | 2.053842e-49 | -8.615850e-47 |
| Msa0702810 | Msa0737990 | 0.807077 | 6.027173e-50 | -8.615850e-47 |
| Msa0709440 | Msa0737990 | 0.843084 | 1.741592e-58 | -8.615850e-47 |
| Msa0713960 | Msa0737990 | 0.801879 | 7.309815e-49 | -8.615850e-47 |
| Msa0714520 | Msa0737990 | 0.847297 | 1.264462e-59 | -8.615850e-47 |
| Msa0722220 | Msa0737990 | 0.858637 | 7.183621e-63 | -8.615850e-47 |
| Msa0735780 | Msa0737990 | 0.826613 | 2.464379e-54 | -8.615850e-47 |
| Msa0737990 | Msa0738700 | 0.807017 | 6.205532e-50 | -8.615850e-47 |
| Msa0737990 | Msa0743440 | 0.852560 | 4.260129e-61 | -8.615850e-47 |
| Msa0737990 | Msa0745720 | 0.834860 | 2.347645e-56 | -8.615850e-47 |
| Msa0737990 | Msa0747740 | 0.814445 | 1.534830e-51 | -8.615850e-47 |
| Msa0737990 | Msa0756820 | 0.805019 | 1.633885e-49 | -8.615850e-47 |
| Msa0737990 | Msa0758650 | 0.829930 | 3.907983e-55 | -8.615850e-47 |
| Msa0737990 | Msa0761670 | 0.839357 | 1.662816e-57 | -8.615850e-47 |
| Msa0737990 | Msa0773630 | 0.813505 | 2.473700e-51 | -8.615850e-47 |
| Msa0737990 | Msa0777750 | 0.810949 | 8.937916e-51 | -8.615850e-47 |
| Msa0737990 | Msa0780910 | 0.801865 | 7.360621e-49 | -8.615850e-47 |
| Msa0737990 | Msa0785240 | 0.804460 | 2.137985e-49 | -8.615850e-47 |
| Msa0737990 | Msa0805680 | 0.834606 | 2.719388e-56 | -8.615850e-47 |
| Msa0737990 | Msa0811020 | 0.805651 | 1.204419e-49 | -8.615850e-47 |
| Msa0737990 | Msa0817360 | 0.864361 | 1.285338e-64 | -8.615850e-47 |
| Msa0737990 | Msa0818880 | 0.801601 | 8.338432e-49 | -8.615850e-47 |
| Msa0737990 | Msa0821160 | 0.805510 | 1.288985e-49 | -8.615850e-47 |
| Msa0737990 | Msa0824450 | 0.818878 | 1.557631e-52 | -8.615850e-47 |
| Msa0737990 | Msa0828970 | 0.812203 | 4.770551e-51 | -8.615850e-47 |
| Msa0737990 | Msa0843050 | 0.817230 | 3.672511e-52 | -8.615850e-47 |
| Msa0737990 | Msa0857890 | 0.842022 | 3.331678e-58 | -8.615850e-47 |
| Msa0737990 | Msa0863620 | 0.864593 | 1.087822e-64 | -8.615850e-47 |
| Msa0737990 | Msa0867110 | 0.834917 | 2.271489e-56 | -8.615850e-47 |
| Msa0737990 | Msa0888790 | 0.820196 | 7.792040e-53 | -8.615850e-47 |
| Msa0737990 | Msa0909760 | 0.803275 | 3.768701e-49 | -8.615850e-47 |
| Msa0737990 | Msa0915520 | 0.828063 | 1.107109e-54 | -8.615850e-47 |
| Msa0737990 | Msa0924430 | 0.826830 | 2.186915e-54 | -8.615850e-47 |
| Msa0737990 | Msa0931590 | 0.856854 | 2.427210e-62 | -8.615850e-47 |
| Msa0737990 | Msa0966320 | 0.801450 | 8.954128e-49 | -8.615850e-47 |
| Msa0737990 | Msa0989370 | 0.806464 | 8.124508e-50 | -8.615850e-47 |
| Msa0737990 | Msa1035220 | 0.816396 | 5.651286e-52 | -8.615850e-47 |
| Msa0737990 | Msa1035570 | 0.803648 | 3.152983e-49 | -8.615850e-47 |
| Msa0737990 | Msa1035610 | 0.811237 | 7.739793e-51 | -8.615850e-47 |
| Msa0737990 | Msa1035650 | 0.804118 | 2.518081e-49 | -8.615850e-47 |
| Msa0737990 | Msa1037540 | 0.802716 | 4.916067e-49 | -8.615850e-47 |
| Msa0737990 | Msa1042880 | 0.809796 | 1.585021e-50 | -8.615850e-47 |
| Msa0737990 | Msa1059020 | 0.861786 | 8.034063e-64 | -8.615850e-47 |
| Msa0737990 | Msa1081390 | 0.822587 | 2.187336e-53 | -8.615850e-47 |
| Msa0737990 | Msa1082200 | 0.852256 | 5.200422e-61 | -8.615850e-47 |
| Msa0737990 | Msa1084530 | 0.842057 | 3.261169e-58 | -8.615850e-47 |
| Msa0737990 | Msa1104220 | 0.824238 | 8.995353e-54 | -8.615850e-47 |
| Msa0737990 | Msa1116190 | 0.827291 | 1.696543e-54 | -8.615850e-47 |
| Msa0737990 | Msa1116220 | 0.822240 | 2.632850e-53 | -8.615850e-47 |
| Msa0737990 | Msa1116660 | 0.817672 | 2.920997e-52 | -8.615850e-47 |
| Msa0737990 | Msa1116740 | 0.800615 | 1.326068e-48 | -8.615850e-47 |
| Msa0737990 | Msa1125820 | 0.851898 | 6.575399e-61 | -8.615850e-47 |
| Msa0737990 | Msa1125990 | 0.847260 | 1.293889e-59 | -8.615850e-47 |
| Msa0737990 | Msa1127470 | 0.826872 | 2.136695e-54 | -8.615850e-47 |
| Msa0737990 | Msa1132530 | 0.810386 | 1.182692e-50 | -8.615850e-47 |
| Msa0737990 | Msa1147910 | 0.805227 | 1.477926e-49 | -8.615850e-47 |
| Msa0737990 | Msa1159590 | 0.800316 | 1.526051e-48 | -8.615850e-47 |
| Msa0737990 | Msa1162180 | 0.830839 | 2.343087e-55 | -8.615850e-47 |
| Msa0737990 | Msa1162880 | 0.806177 | 9.338421e-50 | -8.615850e-47 |
| Msa0737990 | Msa1166440 | 0.800133 | 1.662631e-48 | -8.615850e-47 |
| Msa0737990 | Msa1171290 | 0.837047 | 6.545947e-57 | -8.615850e-47 |
| Msa0737990 | Msa1192570 | 0.810416 | 1.165107e-50 | -8.615850e-47 |
| Msa0737990 | Msa1201540 | 0.802252 | 6.127141e-49 | -8.615850e-47 |
| Msa0737990 | Msa1208950 | 0.805644 | 1.208607e-49 | -8.615850e-47 |
| Msa0737990 | Msa1213830 | 0.821027 | 5.022853e-53 | -8.615850e-47 |
| Msa0737990 | Msa1214350 | 0.852029 | 6.033359e-61 | -8.615850e-47 |
| Msa0737990 | Msa1215870 | 0.838460 | 2.838402e-57 | -8.615850e-47 |
| Msa0737990 | Msa1218820 | 0.808886 | 2.484815e-50 | -8.615850e-47 |
| Msa0737990 | Msa1223390 | 0.815006 | 1.153250e-51 | -8.615850e-47 |
| Msa0737990 | Msa1228870 | 0.816555 | 5.205721e-52 | -8.615850e-47 |
| Msa0737990 | Msa1244240 | 0.810562 | 1.083944e-50 | -8.615850e-47 |
| Msa0737990 | Msa1254540 | 0.833765 | 4.418276e-56 | -8.615850e-47 |
| Msa0737990 | Msa1261050 | 0.839903 | 1.199252e-57 | -8.615850e-47 |
| Msa0737990 | Msa1263740 | 0.814139 | 1.793619e-51 | -8.615850e-47 |
| Msa0737990 | Msa1263780 | 0.836117 | 1.129404e-56 | -8.615850e-47 |
| Msa0737990 | Msa1294460 | 0.826665 | 2.395340e-54 | -8.615850e-47 |
| Msa0737990 | Msa1300460 | 0.850092 | 2.123573e-60 | -8.615850e-47 |
| Msa0737990 | Msa1305920 | 0.800912 | 1.153582e-48 | -8.615850e-47 |
| Msa0737990 | Msa1306790 | 0.814525 | 1.474038e-51 | -8.615850e-47 |
| Msa0737990 | Msa1309090 | 0.800303 | 1.535305e-48 | -8.615850e-47 |
| Msa0737990 | Msa1332950 | 0.829750 | 4.323385e-55 | -8.615850e-47 |
| Msa0737990 | Msa1338210 | 0.823365 | 1.440758e-53 | -8.615850e-47 |
| Msa0737990 | Msa1339170 | 0.801143 | 1.034780e-48 | -8.615850e-47 |
| Msa0737990 | Msa1343170 | 0.831227 | 1.880959e-55 | -8.615850e-47 |
| Msa0737990 | Msa1343180 | 0.829723 | 4.387307e-55 | -8.615850e-47 |
| Msa0737990 | Msa1362130 | 0.828713 | 7.715378e-55 | -8.615850e-47 |
| Msa0737990 | Msa1364410 | 0.808820 | 2.566176e-50 | -8.615850e-47 |
| Msa0737990 | Msa1368750 | 0.833876 | 4.146195e-56 | -8.615850e-47 |
| Msa0737990 | Msa1374790 | 0.829429 | 5.172213e-55 | -8.615850e-47 |
| Msa0737990 | Msa1380120 | 0.830043 | 3.666308e-55 | -8.615850e-47 |
| Msa0737990 | Msa1381470 | 0.814982 | 1.167148e-51 | -8.615850e-47 |
| Msa0737990 | Msa1384150 | 0.810685 | 1.019318e-50 | -8.615850e-47 |
| Msa0737990 | Msa1387440 | 0.804925 | 1.709178e-49 | -8.615850e-47 |
| Msa0737990 | Msa1415540 | 0.813547 | 2.421944e-51 | -8.615850e-47 |
| Msa0737990 | Msa1437930 | 0.816410 | 5.611264e-52 | -8.615850e-47 |
| Msa0737990 | Msa1440630 | 0.821377 | 4.170606e-53 | -8.615850e-47 |
| Msa0737990 | Msa1445120 | 0.804800 | 1.815336e-49 | -8.615850e-47 |
| Msa0737990 | Msa1450190 | 0.824686 | 7.055739e-54 | -8.615850e-47 |
| Msa0737990 | Msa1451820 | 0.830630 | 2.635369e-55 | -8.615850e-47 |
| Msa0737990 | Msa1452140 | 0.800708 | 1.269694e-48 | -8.615850e-47 |
| Msa0737990 | Msa1465360 | 0.800873 | 1.175097e-48 | -8.615850e-47 |
| Msa0121330 | Msa0737990 | 0.822264 | 2.599972e-53 | -8.615850e-47 |
| Msa0122330 | Msa0737990 | 0.813834 | 2.094116e-51 | -8.615850e-47 |
| Msa0125210 | Msa0737990 | 0.807769 | 4.300171e-50 | -8.615850e-47 |
| Msa0128310 | Msa0737990 | 0.809324 | 2.001301e-50 | -8.615850e-47 |
| Msa0140280 | Msa0737990 | 0.834681 | 2.604177e-56 | -8.615850e-47 |
| Msa0140380 | Msa0737990 | 0.808052 | 3.743576e-50 | -8.615850e-47 |
| Msa0143670 | Msa0737990 | 0.812829 | 3.482306e-51 | -8.615850e-47 |
| Msa0159590 | Msa0737990 | 0.804261 | 2.351055e-49 | -8.615850e-47 |
| Msa0174440 | Msa0737990 | 0.810271 | 1.252374e-50 | -8.615850e-47 |
| Msa0190570 | Msa0737990 | 0.817205 | 3.721298e-52 | -8.615850e-47 |
| Msa0190730 | Msa0737990 | 0.807879 | 4.073560e-50 | -8.615850e-47 |
| Msa0200050 | Msa0737990 | 0.842660 | 2.257796e-58 | -8.615850e-47 |
| Msa0213030 | Msa0737990 | 0.843933 | 1.033227e-58 | -8.615850e-47 |
| Msa0230800 | Msa0737990 | 0.830490 | 2.852587e-55 | -8.615850e-47 |
| Msa0230870 | Msa0737990 | 0.818256 | 2.154826e-52 | -8.615850e-47 |
| Msa0232760 | Msa0737990 | 0.869880 | 2.221789e-66 | -8.615850e-47 |
| Msa0233020 | Msa0737990 | 0.824562 | 7.546173e-54 | -8.615850e-47 |
| Msa0367520 | Msa0737990 | 0.815545 | 8.753118e-52 | -8.615850e-47 |
| Msa0368860 | Msa0737990 | 0.839387 | 1.633331e-57 | -8.615850e-47 |
| Msa0373500 | Msa0737990 | 0.800771 | 1.232598e-48 | -8.615850e-47 |
| Msa0380670 | Msa0737990 | 0.842828 | 2.037237e-58 | -8.615850e-47 |
| Msa0383000 | Msa0737990 | 0.818433 | 1.965762e-52 | -8.615850e-47 |
| Msa0389950 | Msa0737990 | 0.804522 | 2.075004e-49 | -8.615850e-47 |
| Msa0400000 | Msa0737990 | 0.807238 | 5.573688e-50 | -8.615850e-47 |
| Msa0416160 | Msa0737990 | 0.809173 | 2.157196e-50 | -8.615850e-47 |
| Msa0419540 | Msa0737990 | 0.809779 | 1.598501e-50 | -8.615850e-47 |
| Msa0430300 | Msa0737990 | 0.832905 | 7.238198e-56 | -8.615850e-47 |
| Msa0430480 | Msa0737990 | 0.824440 | 8.060781e-54 | -8.615850e-47 |
| Msa0432010 | Msa0737990 | 0.830810 | 2.381482e-55 | -8.615850e-47 |
| Msa0433150 | Msa0737990 | 0.823161 | 1.607708e-53 | -8.615850e-47 |
| Msa0433760 | Msa0737990 | 0.812297 | 4.552106e-51 | -8.615850e-47 |
| Msa0443410 | Msa0737990 | 0.804016 | 2.644382e-49 | -8.615850e-47 |
| Msa0447750 | Msa0737990 | 0.844994 | 5.352757e-59 | -8.615850e-47 |
| Msa0462780 | Msa0737990 | 0.827390 | 1.606175e-54 | -8.615850e-47 |
| Msa0477630 | Msa0737990 | 0.807750 | 4.340105e-50 | -8.615850e-47 |
| Msa0481890 | Msa0737990 | 0.842288 | 2.833499e-58 | -8.615850e-47 |
| Msa0272260 | Msa0737990 | 0.829168 | 5.985969e-55 | -8.615850e-47 |
| Msa0280790 | Msa0737990 | 0.804424 | 2.174651e-49 | -8.615850e-47 |
| Msa0298470 | Msa0737990 | 0.802596 | 5.205540e-49 | -8.615850e-47 |
| Msa0353950 | Msa0737990 | 0.809407 | 1.921722e-50 | -8.615850e-47 |
| Msa0495550 | Msa0737990 | 0.807730 | 4.381548e-50 | -8.615850e-47 |
| Msa0511470 | Msa0737990 | 0.804857 | 1.765980e-49 | -8.615850e-47 |
| Msa0520870 | Msa0737990 | 0.828920 | 6.876196e-55 | -8.615850e-47 |
| Msa0521680 | Msa0737990 | 0.825421 | 4.729854e-54 | -8.615850e-47 |
| Msa0524520 | Msa0737990 | 0.808193 | 3.492895e-50 | -8.615850e-47 |
| Msa0528570 | Msa0737990 | 0.808549 | 2.932348e-50 | -8.615850e-47 |
| Msa0531960 | Msa0737990 | 0.819040 | 1.430567e-52 | -8.615850e-47 |
| Msa0563740 | Msa0737990 | 0.833845 | 4.218857e-56 | -8.615850e-47 |
| Msa0567170 | Msa0737990 | 0.804031 | 2.625952e-49 | -8.615850e-47 |
| Msa0571620 | Msa0737990 | 0.807242 | 5.562305e-50 | -8.615850e-47 |
| Msa0577280 | Msa0737990 | 0.811973 | 5.355440e-51 | -8.615850e-47 |
| Msa0577330 | Msa0737990 | 0.815431 | 9.275428e-52 | -8.615850e-47 |
| Msa0577820 | Msa0737990 | 0.806089 | 9.744233e-50 | -8.615850e-47 |
| Msa0580810 | Msa0737990 | 0.814893 | 1.221510e-51 | -8.615850e-47 |
| Msa0588920 | Msa0737990 | 0.839507 | 1.520274e-57 | -8.615850e-47 |
| Msa0590200 | Msa0737990 | 0.807815 | 4.203131e-50 | -8.615850e-47 |
| Msa0593400 | Msa0737990 | 0.806473 | 8.086896e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0737990 | MtrunA17_Chr5g0436141 | 97.049 | 576 | 17 | 0 | 1 | 576 | 1 | 576 | 0.0 | 1163 |
| Msa0737990 | MtrunA17_Chr3g0112731 | 68.317 | 606 | 145 | 14 | 1 | 572 | 1 | 593 | 0.0 | 778 |
| Msa0737990 | MtrunA17_Chr7g0240501 | 64.989 | 457 | 155 | 2 | 84 | 539 | 186 | 638 | 0.0 | 629 |
| Msa0737990 | MtrunA17_Chr4g0008771 | 62.500 | 432 | 152 | 3 | 42 | 469 | 54 | 479 | 0.0 | 544 |
| Msa0737990 | MtrunA17_Chr4g0038651 | 52.686 | 484 | 197 | 7 | 84 | 558 | 89 | 549 | 3.43e-163 | 476 |
| Msa0737990 | MtrunA17_Chr8g0348921 | 56.000 | 375 | 144 | 4 | 84 | 445 | 99 | 465 | 2.93e-137 | 407 |
| Msa0737990 | MtrunA17_Chr7g0247761 | 51.675 | 418 | 138 | 4 | 84 | 445 | 115 | 524 | 1.09e-130 | 392 |
| Msa0737990 | MtrunA17_Chr4g0004771 | 51.366 | 366 | 157 | 4 | 86 | 450 | 94 | 439 | 1.86e-130 | 392 |
| Msa0737990 | MtrunA17_Chr6g0485861 | 50.256 | 390 | 166 | 6 | 84 | 464 | 98 | 468 | 1.64e-129 | 390 |
| Msa0737990 | MtrunA17_Chr2g0331631 | 50.139 | 361 | 161 | 4 | 86 | 445 | 90 | 432 | 1.43e-123 | 374 |
| Msa0737990 | MtrunA17_Chr5g0408591 | 46.092 | 371 | 190 | 2 | 75 | 445 | 111 | 471 | 2.34e-107 | 333 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0737990 | AT5G05940.1 | 62.327 | 507 | 177 | 10 | 42 | 537 | 63 | 566 | 0.0 | 619 |
| Msa0737990 | AT5G02010.1 | 62.630 | 479 | 143 | 9 | 63 | 532 | 52 | 503 | 0.0 | 593 |
| Msa0737990 | AT3G55660.1 | 53.817 | 524 | 196 | 9 | 42 | 534 | 71 | 579 | 5.45e-178 | 515 |
| Msa0737990 | AT5G05940.2 | 65.067 | 375 | 126 | 3 | 42 | 413 | 63 | 435 | 5.38e-176 | 507 |
| Msa0737990 | AT4G38430.1 | 55.944 | 429 | 173 | 5 | 67 | 491 | 80 | 496 | 1.05e-162 | 475 |
| Msa0737990 | AT3G55660.2 | 59.788 | 378 | 135 | 5 | 42 | 413 | 71 | 437 | 2.08e-152 | 445 |
| Msa0737990 | AT4G00460.2 | 56.477 | 386 | 153 | 5 | 74 | 452 | 96 | 473 | 2.51e-143 | 423 |
| Msa0737990 | AT4G00460.4 | 56.477 | 386 | 153 | 5 | 74 | 452 | 96 | 473 | 2.51e-143 | 423 |
| Msa0737990 | AT1G01700.1 | 57.713 | 376 | 144 | 5 | 77 | 445 | 111 | 478 | 1.68e-140 | 416 |
| Msa0737990 | AT1G01700.4 | 53.448 | 406 | 144 | 6 | 77 | 445 | 111 | 508 | 2.34e-134 | 402 |
| Msa0737990 | AT3G24620.1 | 52.329 | 365 | 154 | 4 | 84 | 447 | 87 | 432 | 4.44e-133 | 399 |
| Msa0737990 | AT2G45890.1 | 52.507 | 379 | 159 | 6 | 84 | 452 | 95 | 462 | 4.58e-128 | 384 |
| Msa0737990 | AT4G13240.1 | 49.864 | 367 | 164 | 4 | 84 | 449 | 76 | 423 | 1.77e-126 | 381 |
| Msa0737990 | AT1G52240.1 | 51.913 | 366 | 153 | 5 | 86 | 450 | 108 | 451 | 3.14e-123 | 374 |
| Msa0737990 | AT1G79860.1 | 49.307 | 361 | 162 | 5 | 86 | 445 | 96 | 436 | 3.36e-121 | 368 |
| Msa0737990 | AT4G00460.3 | 54.252 | 341 | 141 | 5 | 119 | 452 | 8 | 340 | 5.70e-121 | 361 |
| Msa0737990 | AT1G01700.3 | 53.631 | 358 | 144 | 6 | 77 | 420 | 111 | 460 | 7.74e-118 | 357 |
| Msa0737990 | AT3G16130.1 | 49.727 | 366 | 166 | 5 | 86 | 450 | 94 | 442 | 7.95e-118 | 360 |
| Msa0737990 | AT5G19560.1 | 48.229 | 367 | 172 | 4 | 84 | 449 | 46 | 395 | 1.61e-116 | 355 |
| Msa0737990 | AT5G19560.5 | 48.229 | 367 | 172 | 4 | 84 | 449 | 46 | 395 | 1.61e-116 | 355 |
| Msa0737990 | AT5G19560.4 | 48.229 | 367 | 172 | 4 | 84 | 449 | 65 | 414 | 3.96e-116 | 355 |
| Msa0737990 | AT5G19560.2 | 46.828 | 331 | 158 | 4 | 84 | 413 | 65 | 378 | 1.06e-100 | 310 |
| Msa0737990 | AT1G31650.2 | 42.162 | 370 | 195 | 3 | 84 | 448 | 110 | 465 | 1.02e-97 | 308 |
| Msa0737990 | AT1G31650.1 | 42.162 | 370 | 195 | 3 | 84 | 448 | 138 | 493 | 3.99e-97 | 307 |
| Msa0737990 | AT4G00460.1 | 56.723 | 238 | 98 | 3 | 74 | 308 | 96 | 331 | 4.22e-82 | 261 |
| Msa0737990 | AT1G01700.5 | 59.276 | 221 | 87 | 2 | 77 | 294 | 111 | 331 | 7.08e-80 | 256 |
| Msa0737990 | AT1G01700.2 | 59.276 | 221 | 87 | 2 | 77 | 294 | 111 | 331 | 7.08e-80 | 256 |
| Msa0737990 | AT5G19560.3 | 45.683 | 278 | 133 | 4 | 173 | 449 | 5 | 265 | 4.53e-78 | 251 |
Find 131 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATGGCTGCTTTCAGTATT+TGG | 0.134248 | 5_1:+55611726 | None:intergenic |
| TAACATGGTTTCACAGAAAA+AGG | 0.190047 | 5_1:-55610584 | Msa0737990:CDS |
| TTCATCTGATTTGCTGCATT+TGG | 0.225466 | 5_1:+55613243 | None:intergenic |
| GGAAGTTCCCGAGTCGTATT+TGG | 0.241485 | 5_1:-55611675 | Msa0737990:CDS |
| TTGTTATTGTTGTGGATAAA+TGG | 0.242485 | 5_1:+55610451 | None:intergenic |
| GGTCTTCTTCATTTCCTATT+AGG | 0.245693 | 5_1:-55613279 | Msa0737990:CDS |
| ACTCAACACAAAGCAAAATT+TGG | 0.247443 | 5_1:-55610529 | Msa0737990:CDS |
| AGAAAGCTATTCAAGAGTTT+TGG | 0.254846 | 5_1:-55610704 | Msa0737990:CDS |
| ACACAACTGTTGCTATTTCT+AGG | 0.263163 | 5_1:+55609974 | None:intergenic |
| CAACATGTAGGAACTGTATT+TGG | 0.265120 | 5_1:-55612761 | Msa0737990:intron |
| TCTTGAATAGCTTTCTAGTA+TGG | 0.268560 | 5_1:+55610711 | None:intergenic |
| AAACCTCAACGTCGCGGTTT+TGG | 0.279389 | 5_1:-55610418 | Msa0737990:CDS |
| TTGTTGAGTTAATGCCTTCT+TGG | 0.293497 | 5_1:-55612649 | Msa0737990:CDS |
| GCAGGAGGCACACGGGGTAC+TGG | 0.311400 | 5_1:+55611803 | None:intergenic |
| GAACTGTATTTGGACAATTA+TGG | 0.318046 | 5_1:-55612751 | Msa0737990:CDS |
| GTTGCACTGCTATGGAGTTT+TGG | 0.323799 | 5_1:-55611916 | Msa0737990:CDS |
| TGGAAATCTATCTGAATGTT+TGG | 0.339488 | 5_1:+55610621 | None:intergenic |
| TATTTCCAATTGTCCTTCAA+TGG | 0.344917 | 5_1:+55610001 | None:intergenic |
| GACATAGTGCCCTTCCTAAT+AGG | 0.352007 | 5_1:+55613265 | None:intergenic |
| TTCATTGAAGCAGCGCTTCC+CGG | 0.357161 | 5_1:-55611164 | Msa0737990:CDS |
| AATAAATAAACAAATGGTTC+TGG | 0.376396 | 5_1:+55610051 | None:intergenic |
| TTATCATCAACTTGAGAAAC+AGG | 0.378270 | 5_1:+55613208 | None:intergenic |
| AGAAAAGTGGCAGAGAGAAA+TGG | 0.381993 | 5_1:-55612699 | Msa0737990:CDS |
| CTCTAATGCAACATGCTCAT+TGG | 0.407900 | 5_1:+55611360 | None:intergenic |
| TTTGTTACTCAAAACACAAA+AGG | 0.408543 | 5_1:+55613434 | None:intergenic |
| TCTTAATATTGTCCCATTGA+AGG | 0.412423 | 5_1:-55610014 | Msa0737990:three_prime_UTR |
| TGAGAACCATTTGTATTAGT+AGG | 0.412829 | 5_1:-55610121 | Msa0737990:three_prime_UTR |
| TTGTCCCATTGAAGGACAAT+TGG | 0.413993 | 5_1:-55610006 | Msa0737990:three_prime_UTR |
| CATCTGGTGCCACAATTCCT+TGG | 0.414903 | 5_1:+55611885 | None:intergenic |
| CTGATTTCTCTTGCGAAAAG+AGG | 0.416366 | 5_1:+55611850 | None:intergenic |
| GGACATTGTGAAGGACTTCA+TGG | 0.423504 | 5_1:-55611239 | Msa0737990:CDS |
| CATAAATTGCGGCTTCTAAA+CGG | 0.424426 | 5_1:+55611329 | None:intergenic |
| CCCTTTGAAGGACTAATTAG+TGG | 0.432878 | 5_1:+55610484 | None:intergenic |
| CACAACTGTTGCTATTTCTA+GGG | 0.437779 | 5_1:+55609975 | None:intergenic |
| GTGAAGGACTTCATGGTTGA+TGG | 0.439958 | 5_1:-55611232 | Msa0737990:CDS |
| TAGAAGCCGCAATTTATGTA+TGG | 0.441628 | 5_1:-55611324 | Msa0737990:CDS |
| TTTAGATAGTTGCACTGCTA+TGG | 0.442885 | 5_1:-55611924 | Msa0737990:CDS |
| TCAGAATGGAAGAACGTGCT+TGG | 0.444622 | 5_1:-55611455 | Msa0737990:intron |
| GGAGTTACCTCTCCCTTTGA+AGG | 0.445840 | 5_1:+55610472 | None:intergenic |
| CAGGAGGCACACGGGGTACT+GGG | 0.446468 | 5_1:+55611804 | None:intergenic |
| ATTTCCAATTGTCCTTCAAT+GGG | 0.449132 | 5_1:+55610002 | None:intergenic |
| TCAGGATATGTTTGCCAAGA+AGG | 0.453625 | 5_1:+55612635 | None:intergenic |
| TGAATAAATAAATAAACAAA+TGG | 0.455047 | 5_1:+55610045 | None:intergenic |
| TCAAAACACAAAAGGGTTAG+TGG | 0.457781 | 5_1:+55613442 | None:intergenic |
| CAGAATGGAAGAACGTGCTT+GGG | 0.465023 | 5_1:-55611454 | Msa0737990:CDS |
| GAGGCTGATCCATCTGCATC+TGG | 0.467719 | 5_1:+55611869 | None:intergenic |
| AGCATGAAACCTTGTTGCAT+TGG | 0.469347 | 5_1:+55611107 | None:intergenic |
| TCATTGAAGCAGCGCTTCCC+GGG | 0.475313 | 5_1:-55611163 | Msa0737990:CDS |
| CTGCTTGGTGAAGATATGTC+AGG | 0.475560 | 5_1:-55612971 | Msa0737990:CDS |
| GTAACAAAATCAAAGCTTGT+TGG | 0.477756 | 5_1:-55613419 | Msa0737990:five_prime_UTR |
| CAGCATTGCTTTAGATGACA+TGG | 0.484744 | 5_1:-55611696 | Msa0737990:CDS |
| TTCTTCATTTCCTATTAGGA+AGG | 0.485913 | 5_1:-55613275 | Msa0737990:CDS |
| AATGGGTCTTGTAGTTCCAC+TGG | 0.490578 | 5_1:-55613346 | Msa0737990:CDS |
| GTTCGACTACAAAGTCATCC+TGG | 0.490964 | 5_1:-55611261 | Msa0737990:CDS |
| GGTGAAGATATGTCAGGGTC+TGG | 0.491025 | 5_1:-55612965 | Msa0737990:CDS |
| GTACCCCGTGTGCCTCCTGC+CGG | 0.499229 | 5_1:-55611800 | Msa0737990:CDS |
| TTGTTACTCAAAACACAAAA+GGG | 0.500795 | 5_1:+55613435 | None:intergenic |
| CTGCTTTCATCTCTCCTCCA+AGG | 0.501298 | 5_1:+55610371 | None:intergenic |
| TTGTCGAGTTTACGTAGAGC+TGG | 0.504038 | 5_1:+55612054 | None:intergenic |
| TAGATTTCCATTGGCACCAA+TGG | 0.506196 | 5_1:-55610608 | Msa0737990:CDS |
| TGATATTGTTGTTATTGTTG+TGG | 0.506831 | 5_1:+55610443 | None:intergenic |
| GTATTTGGATACCCTTCCTA+AGG | 0.508742 | 5_1:-55611660 | Msa0737990:intron |
| ATGTTAACCATTGGTGCCAA+TGG | 0.513125 | 5_1:+55610601 | None:intergenic |
| GATATGTCAGGGTCTGGAAA+AGG | 0.513629 | 5_1:-55612959 | Msa0737990:CDS |
| ATTTAAGAGAGTGAGTTCAA+TGG | 0.515162 | 5_1:-55610084 | Msa0737990:three_prime_UTR |
| AATCTTCCTACTAATACAAA+TGG | 0.516262 | 5_1:+55610115 | None:intergenic |
| ACATTCAGATAGATTTCCAT+TGG | 0.519216 | 5_1:-55610617 | Msa0737990:CDS |
| ACCTCTAGCTTACTACCATC+AGG | 0.519299 | 5_1:+55612617 | None:intergenic |
| TCTTGAGTTCTCACTGAGAC+CGG | 0.521027 | 5_1:+55611781 | None:intergenic |
| ATGTAGTTTGACTTAAACCC+GGG | 0.524605 | 5_1:+55611146 | None:intergenic |
| TGGAAAATCAAACCTTAGGA+AGG | 0.525020 | 5_1:+55611648 | None:intergenic |
| GTGTGTTTGTGAAAGGAGTA+AGG | 0.525181 | 5_1:-55609955 | Msa0737990:three_prime_UTR |
| ACACCAAAACCGCGACGTTG+AGG | 0.531446 | 5_1:+55610415 | None:intergenic |
| GAGTTCTCACTGAGACCGGC+AGG | 0.534877 | 5_1:+55611785 | None:intergenic |
| ATCAGCGGCAAGAGGAGAAG+TGG | 0.535708 | 5_1:-55611832 | Msa0737990:CDS |
| GTGTTGTCAAATTACCTTGG+AGG | 0.537277 | 5_1:-55610385 | Msa0737990:CDS |
| ATCAGGAGGGGATATAATGA+AGG | 0.538329 | 5_1:-55613011 | Msa0737990:CDS |
| GCCACTAATTAGTCCTTCAA+AGG | 0.542594 | 5_1:-55610485 | Msa0737990:CDS |
| ATGGATTGGCTTCTTTGTGT+TGG | 0.544302 | 5_1:-55612680 | Msa0737990:CDS |
| AGAGTGTTGTCAAATTACCT+TGG | 0.555330 | 5_1:-55610388 | Msa0737990:CDS |
| TCTTCATTTCCTATTAGGAA+GGG | 0.555428 | 5_1:-55613274 | Msa0737990:CDS |
| CCACTAATTAGTCCTTCAAA+GGG | 0.557284 | 5_1:-55610484 | Msa0737990:CDS |
| AATTAGTCCTTCAAAGGGAG+AGG | 0.557362 | 5_1:-55610479 | Msa0737990:CDS |
| GAAGTCCTTCACAATGTCCC+AGG | 0.565686 | 5_1:+55611243 | None:intergenic |
| AAAAGGAGTTAGCACTGCAT+TGG | 0.568507 | 5_1:-55612942 | Msa0737990:CDS |
| AGTGGCAGAGAGAAATGGAT+TGG | 0.572062 | 5_1:-55612694 | Msa0737990:CDS |
| GGGTTTAAGTCAAACTACAT+TGG | 0.572158 | 5_1:-55611143 | Msa0737990:CDS |
| TGACTTTGTAGGATCAGGAG+GGG | 0.572490 | 5_1:-55613023 | Msa0737990:intron |
| GAAGGACTAATTAGTGGCAC+AGG | 0.574721 | 5_1:+55610490 | None:intergenic |
| CCGCAATTTATGTATGGCGC+CGG | 0.576636 | 5_1:-55611318 | Msa0737990:CDS |
| TGAGACCGGCAGGAGGCACA+CGG | 0.577679 | 5_1:+55611795 | None:intergenic |
| AAATATTGTTGAAATCTGAA+AGG | 0.577938 | 5_1:-55610152 | Msa0737990:three_prime_UTR |
| CATGTGAAAAGAAAGAAAAG+TGG | 0.581474 | 5_1:-55612712 | Msa0737990:CDS |
| AGGTTTGCGAAGTTACTGCT+TGG | 0.585242 | 5_1:-55612986 | Msa0737990:CDS |
| TTCGACTACAAAGTCATCCT+GGG | 0.585548 | 5_1:-55611260 | Msa0737990:CDS |
| GTCGAACGGCTAGGATAAAG+TGG | 0.585873 | 5_1:+55611277 | None:intergenic |
| AACAGTTGTGTGTTTGTGAA+AGG | 0.586920 | 5_1:-55609962 | Msa0737990:three_prime_UTR |
| GAGGGGATATAATGAAGGAA+AGG | 0.591071 | 5_1:-55613006 | Msa0737990:CDS |
| TTTGACTTTGTAGGATCAGG+AGG | 0.593537 | 5_1:-55613025 | Msa0737990:intron |
| TGTGAAACCATGTTAACCAT+TGG | 0.593683 | 5_1:+55610592 | None:intergenic |
| ATTGGCACCAATGGTTAACA+TGG | 0.597219 | 5_1:-55610599 | Msa0737990:CDS |
| GAGACCGGCAGGAGGCACAC+GGG | 0.597490 | 5_1:+55611796 | None:intergenic |
| CAAGAGAAATCAGCGGCAAG+AGG | 0.598859 | 5_1:-55611840 | Msa0737990:CDS |
| AATGCTATTACTAATTTGTG+TGG | 0.601531 | 5_1:-55612911 | Msa0737990:intron |
| GTGGTTTAGAGTGAGATCTC+CGG | 0.603157 | 5_1:+55611299 | None:intergenic |
| GTATGTTGACCAAGGAATTG+TGG | 0.604214 | 5_1:-55611894 | Msa0737990:CDS |
| AGTGGCACAGGTGAATAACT+AGG | 0.609813 | 5_1:+55610502 | None:intergenic |
| TTGACTTTGTAGGATCAGGA+GGG | 0.610216 | 5_1:-55613024 | Msa0737990:intron |
| AATGTAGTTTGACTTAAACC+CGG | 0.610470 | 5_1:+55611145 | None:intergenic |
| GTCATCCTGGGACATTGTGA+AGG | 0.614434 | 5_1:-55611248 | Msa0737990:CDS |
| TGCTTGGTGAAGATATGTCA+GGG | 0.618748 | 5_1:-55612970 | Msa0737990:CDS |
| AGCAATGCTGTTGATAGACA+TGG | 0.626027 | 5_1:+55611709 | None:intergenic |
| TCCTGATGGTAGTAAGCTAG+AGG | 0.628089 | 5_1:-55612618 | Msa0737990:intron |
| ACAACTGTTGCTATTTCTAG+GGG | 0.628205 | 5_1:+55609976 | None:intergenic |
| TCTTGGCAAACATATCCTGA+TGG | 0.629177 | 5_1:-55612632 | Msa0737990:CDS |
| AGGATGACTTTGTAGTCGAA+CGG | 0.629366 | 5_1:+55611263 | None:intergenic |
| AAGGGTATCCAAATACGACT+CGG | 0.630421 | 5_1:+55611667 | None:intergenic |
| GGAAAATCAAACCTTAGGAA+GGG | 0.632917 | 5_1:+55611649 | None:intergenic |
| ATCTGAGCAACACGATCCAG+TGG | 0.638385 | 5_1:+55613330 | None:intergenic |
| AGGGTATCCAAATACGACTC+GGG | 0.638687 | 5_1:+55611668 | None:intergenic |
| ATCATTAAACCTCAACGTCG+CGG | 0.638867 | 5_1:-55610424 | Msa0737990:CDS |
| AGACCGGCAGGAGGCACACG+GGG | 0.642385 | 5_1:+55611797 | None:intergenic |
| GACTTTGTAGTCGAACGGCT+AGG | 0.643393 | 5_1:+55611268 | None:intergenic |
| GCAAGTCAAAATGATGTGTG+AGG | 0.643424 | 5_1:-55610246 | Msa0737990:exon |
| ATTGTGGCACCAGATGCAGA+TGG | 0.645033 | 5_1:-55611878 | Msa0737990:CDS |
| AGCGGCAAGAGGAGAAGTGG+TGG | 0.645482 | 5_1:-55611829 | Msa0737990:CDS |
| GCACTCTTGAGAGAACTGCT+CGG | 0.648617 | 5_1:+55611405 | None:intergenic |
| CCGGCGCCATACATAAATTG+CGG | 0.651302 | 5_1:+55611318 | None:intergenic |
| TAGCAAGATCCAATGCAACA+AGG | 0.662550 | 5_1:-55611116 | Msa0737990:intron |
| TTCTCACTGAGACCGGCAGG+AGG | 0.665518 | 5_1:+55611788 | None:intergenic |
| GAACGGCTAGGATAAAGTGG+TGG | 0.710185 | 5_1:+55611280 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTATCTTTCTATAAA+TGG | - | chr5_1:55612557-55612576 | Msa0737990:intron | 10.0% |
| !! | TTTAGATAAACAATTTAATT+AGG | + | chr5_1:55612656-55612675 | None:intergenic | 10.0% |
| !! | TGAATAAATAAATAAACAAA+TGG | + | chr5_1:55613406-55613425 | None:intergenic | 10.0% |
| !!! | AATTTTCAAAAGAGAAAAAA+TGG | - | chr5_1:55610084-55610103 | Msa0737990:three_prime_UTR | 15.0% |
| !!! | ATTTTCAAAAGAGAAAAAAT+GGG | - | chr5_1:55610085-55610104 | Msa0737990:three_prime_UTR | 15.0% |
| !! | TTCAACAAAGATTAATAAAT+AGG | - | chr5_1:55610901-55610920 | Msa0737990:intron | 15.0% |
| !!! | TTTTTTTCTCTTTTTTTCAT+TGG | + | chr5_1:55613279-55613298 | None:intergenic | 15.0% |
| !! | TACAAAGTCAAAACATAATA+AGG | + | chr5_1:55610415-55610434 | None:intergenic | 20.0% |
| !!! | TTATTATGTTTTGACTTTGT+AGG | - | chr5_1:55610414-55610433 | Msa0737990:CDS | 20.0% |
| !!! | TTTCTTACAATTTGTTCAAT+TGG | - | chr5_1:55610655-55610674 | Msa0737990:CDS | 20.0% |
| !!! | TTCTTACAATTTGTTCAATT+GGG | - | chr5_1:55610656-55610675 | Msa0737990:CDS | 20.0% |
| !! | ACATTAAACTCACATATATA+AGG | + | chr5_1:55610877-55610896 | None:intergenic | 20.0% |
| !!! | ATTTTTTATTCTTCCAATGT+AGG | - | chr5_1:55611438-55611457 | Msa0737990:CDS | 20.0% |
| !! | ATTGTTGATACTATATAATC+TGG | - | chr5_1:55611891-55611910 | Msa0737990:CDS | 20.0% |
| !!! | TGTTTCATTTTAAACATTTC+AGG | - | chr5_1:55612702-55612721 | Msa0737990:CDS | 20.0% |
| !! | AAATATTGTTGAAATCTGAA+AGG | - | chr5_1:55613296-55613315 | Msa0737990:CDS | 20.0% |
| !! | AATAAATAAACAAATGGTTC+TGG | + | chr5_1:55613400-55613419 | None:intergenic | 20.0% |
| ! | TTGTTACTCAAAACACAAAA+GGG | + | chr5_1:55610016-55610035 | None:intergenic | 25.0% |
| ! | TTTGTTACTCAAAACACAAA+AGG | + | chr5_1:55610017-55610036 | None:intergenic | 25.0% |
| ! | AACAAGCAAAAATAGCAAAA+GGG | - | chr5_1:55610148-55610167 | Msa0737990:three_prime_UTR | 25.0% |
| ! | TTATGTTCTGTTTAGTGTTT+AGG | - | chr5_1:55610318-55610337 | Msa0737990:CDS | 25.0% |
| !! | AATGCTATTACTAATTTGTG+TGG | - | chr5_1:55610537-55610556 | Msa0737990:CDS | 25.0% |
| !! | TATTACTAATTTGTGTGGTA+TGG | - | chr5_1:55610542-55610561 | Msa0737990:CDS | 25.0% |
| !! | TTGTAACACATATTGATAGT+AGG | - | chr5_1:55610571-55610590 | Msa0737990:CDS | 25.0% |
| !!! | GTTAACTTTTTCTTGTGTTA+TGG | - | chr5_1:55610616-55610635 | Msa0737990:CDS | 25.0% |
| ! | TTCGTTTGATTGAAATAGAA+CGG | - | chr5_1:55610986-55611005 | Msa0737990:intron | 25.0% |
| !!! | CAAATTTCGAGTTTTCAATT+TGG | + | chr5_1:55611199-55611218 | None:intergenic | 25.0% |
| ! | TTGATAAAAATGTCTGATCT+TGG | + | chr5_1:55611370-55611389 | None:intergenic | 25.0% |
| ! | CTAAAATTTCCTGTTACATA+GGG | + | chr5_1:55611509-55611528 | None:intergenic | 25.0% |
| !! | TCTAAAATTTCCTGTTACAT+AGG | + | chr5_1:55611510-55611529 | None:intergenic | 25.0% |
| ! | AAATAAGCTGAAATGGTTTA+TGG | + | chr5_1:55612475-55612494 | None:intergenic | 25.0% |
| ! | CTTATGAAAATAAGCTGAAA+TGG | + | chr5_1:55612482-55612501 | None:intergenic | 25.0% |
| !!! | GCTGTTTTTGTAAGTTATTT+GGG | + | chr5_1:55612509-55612528 | None:intergenic | 25.0% |
| !!! | AGCTGTTTTTGTAAGTTATT+TGG | + | chr5_1:55612510-55612529 | None:intergenic | 25.0% |
| ! | AGCAAAACTAATTTCACATT+AGG | + | chr5_1:55612537-55612556 | None:intergenic | 25.0% |
| !!! | ATGTTAATATGAAGTTGGTA+GGG | + | chr5_1:55612683-55612702 | None:intergenic | 25.0% |
| ! | GAAACATGTTAATATGAAGT+TGG | + | chr5_1:55612688-55612707 | None:intergenic | 25.0% |
| !! | TTTTAAACATTTCAGGATGT+TGG | - | chr5_1:55612709-55612728 | Msa0737990:CDS | 25.0% |
| !! | TTGTTATTGTTGTGGATAAA+TGG | + | chr5_1:55613000-55613019 | None:intergenic | 25.0% |
| !! | TGATATTGTTGTTATTGTTG+TGG | + | chr5_1:55613008-55613027 | None:intergenic | 25.0% |
| ! | AATCTTCCTACTAATACAAA+TGG | + | chr5_1:55613336-55613355 | None:intergenic | 25.0% |
| GTAACAAAATCAAAGCTTGT+TGG | - | chr5_1:55610029-55610048 | Msa0737990:three_prime_UTR | 30.0% | |
| !! | TCAAAGCTTGTTGGTAAAAA+TGG | - | chr5_1:55610038-55610057 | Msa0737990:three_prime_UTR | 30.0% |
| GAACAAGCAAAAATAGCAAA+AGG | - | chr5_1:55610147-55610166 | Msa0737990:three_prime_UTR | 30.0% | |
| TTCTTCATTTCCTATTAGGA+AGG | - | chr5_1:55610173-55610192 | Msa0737990:three_prime_UTR | 30.0% | |
| TCTTCATTTCCTATTAGGAA+GGG | - | chr5_1:55610174-55610193 | Msa0737990:three_prime_UTR | 30.0% | |
| TTATCATCAACTTGAGAAAC+AGG | + | chr5_1:55610243-55610262 | None:intergenic | 30.0% | |
| !! | AGAAATTTTTGAGCTGATAC+TGG | + | chr5_1:55610274-55610293 | None:intergenic | 30.0% |
| AGTATCAGCTCAAAAATTTC+TGG | - | chr5_1:55610273-55610292 | Msa0737990:CDS | 30.0% | |
| ACACTAAACAGAACATAACA+AGG | + | chr5_1:55610316-55610335 | None:intergenic | 30.0% | |
| GAACTGTATTTGGACAATTA+TGG | - | chr5_1:55610697-55610716 | Msa0737990:CDS | 30.0% | |
| ! | CACTTTTCTTTCTTTTCACA+TGG | + | chr5_1:55610738-55610757 | None:intergenic | 30.0% |
| CATGTGAAAAGAAAGAAAAG+TGG | - | chr5_1:55610736-55610755 | Msa0737990:intron | 30.0% | |
| ATCATACAAAGTAGAGAGTA+GGG | + | chr5_1:55610927-55610946 | None:intergenic | 30.0% | |
| AATCATACAAAGTAGAGAGT+AGG | + | chr5_1:55610928-55610947 | None:intergenic | 30.0% | |
| ACTCTCTACTTTGTATGATT+AGG | - | chr5_1:55610928-55610947 | Msa0737990:intron | 30.0% | |
| CTCTCTACTTTGTATGATTA+GGG | - | chr5_1:55610929-55610948 | Msa0737990:intron | 30.0% | |
| AACGGTCTATATTTCATGTT+TGG | - | chr5_1:55611004-55611023 | Msa0737990:intron | 30.0% | |
| TTGATCAAAATCAGATGACT+CGG | - | chr5_1:55611054-55611073 | Msa0737990:intron | 30.0% | |
| CTGAACAGCTAAATAGAAAT+TGG | - | chr5_1:55611152-55611171 | Msa0737990:CDS | 30.0% | |
| TATGTGGAAAATCAAACCTT+AGG | + | chr5_1:55611807-55611826 | None:intergenic | 30.0% | |
| ! | AAGATCTCAATCGATTTATG+TGG | + | chr5_1:55611823-55611842 | None:intergenic | 30.0% |
| AAGTTCAAACAACGTATCAT+GGG | + | chr5_1:55611973-55611992 | None:intergenic | 30.0% | |
| AAAGTTCAAACAACGTATCA+TGG | + | chr5_1:55611974-55611993 | None:intergenic | 30.0% | |
| ! | AATGTAGTTTGACTTAAACC+CGG | + | chr5_1:55612306-55612325 | None:intergenic | 30.0% |
| ATTGTATCATCAACAGATCT+TGG | - | chr5_1:55612420-55612439 | Msa0737990:intron | 30.0% | |
| ! | CATGTTAATATGAAGTTGGT+AGG | + | chr5_1:55612684-55612703 | None:intergenic | 30.0% |
| ! | TCTTGAATAGCTTTCTAGTA+TGG | + | chr5_1:55612740-55612759 | None:intergenic | 30.0% |
| ! | AGAAAGCTATTCAAGAGTTT+TGG | - | chr5_1:55612744-55612763 | Msa0737990:CDS | 30.0% |
| TGGAAATCTATCTGAATGTT+TGG | + | chr5_1:55612830-55612849 | None:intergenic | 30.0% | |
| ACATTCAGATAGATTTCCAT+TGG | - | chr5_1:55612831-55612850 | Msa0737990:intron | 30.0% | |
| TAACATGGTTTCACAGAAAA+AGG | - | chr5_1:55612864-55612883 | Msa0737990:intron | 30.0% | |
| ACTCAACACAAAGCAAAATT+TGG | - | chr5_1:55612919-55612938 | Msa0737990:CDS | 30.0% | |
| !!! | TCATTTTGACTTGCTTTTCA+TGG | + | chr5_1:55613196-55613215 | None:intergenic | 30.0% |
| TGAGAACCATTTGTATTAGT+AGG | - | chr5_1:55613327-55613346 | Msa0737990:CDS | 30.0% | |
| ATTTAAGAGAGTGAGTTCAA+TGG | - | chr5_1:55613364-55613383 | Msa0737990:CDS | 30.0% | |
| TCTTAATATTGTCCCATTGA+AGG | - | chr5_1:55613434-55613453 | Msa0737990:five_prime_UTR | 30.0% | |
| ATTTCCAATTGTCCTTCAAT+GGG | + | chr5_1:55613449-55613468 | None:intergenic | 30.0% | |
| TATTTCCAATTGTCCTTCAA+TGG | + | chr5_1:55613450-55613469 | None:intergenic | 30.0% | |
| TCAAAACACAAAAGGGTTAG+TGG | + | chr5_1:55610009-55610028 | None:intergenic | 35.0% | |
| !! | AAGCTTGTTGGTAAAAATGG+AGG | - | chr5_1:55610041-55610060 | Msa0737990:three_prime_UTR | 35.0% |
| GGTCTTCTTCATTTCCTATT+AGG | - | chr5_1:55610169-55610188 | Msa0737990:three_prime_UTR | 35.0% | |
| !! | TTCATCTGATTTGCTGCATT+TGG | + | chr5_1:55610208-55610227 | None:intergenic | 35.0% |
| TACACAATTGCAGCAAAGTA+TGG | + | chr5_1:55610354-55610373 | None:intergenic | 35.0% | |
| !!! | TGTTTTGACTTTGTAGGATC+AGG | - | chr5_1:55610420-55610439 | Msa0737990:CDS | 35.0% |
| CAACATGTAGGAACTGTATT+TGG | - | chr5_1:55610687-55610706 | Msa0737990:CDS | 35.0% | |
| ! | TCTTTCTTTTCACATGGTAC+AGG | + | chr5_1:55610732-55610751 | None:intergenic | 35.0% |
| TTGTTGAGTTAATGCCTTCT+TGG | - | chr5_1:55610799-55610818 | Msa0737990:intron | 35.0% | |
| TAAATTGAGTCCCTGGTTAT+AGG | + | chr5_1:55611085-55611104 | None:intergenic | 35.0% | |
| ! | ACCTGCTGTCAAATTTTCAT+TGG | - | chr5_1:55611104-55611123 | Msa0737990:intron | 35.0% |
| ACCAATGAAAATTTGACAGC+AGG | + | chr5_1:55611108-55611127 | None:intergenic | 35.0% | |
| ATTTAGCTGTTCAGATAGAC+TGG | + | chr5_1:55611146-55611165 | None:intergenic | 35.0% | |
| GGTAGTAGTAGTACTAGTAA+GGG | + | chr5_1:55611252-55611271 | None:intergenic | 35.0% | |
| AGGTAGTAGTAGTACTAGTA+AGG | + | chr5_1:55611253-55611272 | None:intergenic | 35.0% | |
| TCCGTGTGCATATATTTAGT+AGG | - | chr5_1:55611287-55611306 | Msa0737990:CDS | 35.0% | |
| CCCTACTAAATATATGCACA+CGG | + | chr5_1:55611291-55611310 | None:intergenic | 35.0% | |
| CCGTGTGCATATATTTAGTA+GGG | - | chr5_1:55611288-55611307 | Msa0737990:CDS | 35.0% | |
| ! | TACACTTTTCCCTATGTAAC+AGG | - | chr5_1:55611497-55611516 | Msa0737990:intron | 35.0% |
| TTTAGATAGTTGCACTGCTA+TGG | - | chr5_1:55611524-55611543 | Msa0737990:intron | 35.0% | |
| GGAAAATCAAACCTTAGGAA+GGG | + | chr5_1:55611802-55611821 | None:intergenic | 35.0% | |
| TGGAAAATCAAACCTTAGGA+AGG | + | chr5_1:55611803-55611822 | None:intergenic | 35.0% | |
| TGATACATGATAGAACGCTA+TGG | - | chr5_1:55611923-55611942 | Msa0737990:CDS | 35.0% | |
| CGTTGTTTGAACTTTCAGAA+TGG | - | chr5_1:55611979-55611998 | Msa0737990:intron | 35.0% | |
| CATAAATTGCGGCTTCTAAA+CGG | + | chr5_1:55612122-55612141 | None:intergenic | 35.0% | |
| TAGAAGCCGCAATTTATGTA+TGG | - | chr5_1:55612124-55612143 | Msa0737990:intron | 35.0% | |
| ! | ATGTAGTTTGACTTAAACCC+GGG | + | chr5_1:55612305-55612324 | None:intergenic | 35.0% |
| GGGTTTAAGTCAAACTACAT+TGG | - | chr5_1:55612305-55612324 | Msa0737990:intron | 35.0% | |
| TGTGAAACCATGTTAACCAT+TGG | + | chr5_1:55612859-55612878 | None:intergenic | 35.0% | |
| CCACTAATTAGTCCTTCAAA+GGG | - | chr5_1:55612964-55612983 | Msa0737990:CDS | 35.0% | |
| !! | AGAGTGTTGTCAAATTACCT+TGG | - | chr5_1:55613060-55613079 | Msa0737990:intron | 35.0% |
| ! | TGTTCTGTTCTTTTGCAACT+TGG | + | chr5_1:55613147-55613166 | None:intergenic | 35.0% |
| !! | ACAACTGTTGCTATTTCTAG+GGG | + | chr5_1:55613475-55613494 | None:intergenic | 35.0% |
| !! | CACAACTGTTGCTATTTCTA+GGG | + | chr5_1:55613476-55613495 | None:intergenic | 35.0% |
| !! | ACACAACTGTTGCTATTTCT+AGG | + | chr5_1:55613477-55613496 | None:intergenic | 35.0% |
| AACAGTTGTGTGTTTGTGAA+AGG | - | chr5_1:55613486-55613505 | Msa0737990:five_prime_UTR | 35.0% | |
| ! | TTTGACTTTGTAGGATCAGG+AGG | - | chr5_1:55610423-55610442 | Msa0737990:CDS | 40.0% |
| TTGACTTTGTAGGATCAGGA+GGG | - | chr5_1:55610424-55610443 | Msa0737990:CDS | 40.0% | |
| ATCAGGAGGGGATATAATGA+AGG | - | chr5_1:55610437-55610456 | Msa0737990:CDS | 40.0% | |
| GAGGGGATATAATGAAGGAA+AGG | - | chr5_1:55610442-55610461 | Msa0737990:CDS | 40.0% | |
| ! | TGCTTGGTGAAGATATGTCA+GGG | - | chr5_1:55610478-55610497 | Msa0737990:CDS | 40.0% |
| AAAAGGAGTTAGCACTGCAT+TGG | - | chr5_1:55610506-55610525 | Msa0737990:CDS | 40.0% | |
| !! | TGGGATTTGTTGCAACATGT+AGG | - | chr5_1:55610675-55610694 | Msa0737990:CDS | 40.0% |
| AGAAAAGTGGCAGAGAGAAA+TGG | - | chr5_1:55610749-55610768 | Msa0737990:intron | 40.0% | |
| !! | ATGGATTGGCTTCTTTGTGT+TGG | - | chr5_1:55610768-55610787 | Msa0737990:intron | 40.0% |
| TCAGGATATGTTTGCCAAGA+AGG | + | chr5_1:55610816-55610835 | None:intergenic | 40.0% | |
| TCTTGGCAAACATATCCTGA+TGG | - | chr5_1:55610816-55610835 | Msa0737990:intron | 40.0% | |
| TTGTAGTCATGTCAACGCAT+TGG | - | chr5_1:55610956-55610975 | Msa0737990:intron | 40.0% | |
| ! | ACTCGGATTTTCCTATAACC+AGG | - | chr5_1:55611071-55611090 | Msa0737990:intron | 40.0% |
| ! | CTCGGATTTTCCTATAACCA+GGG | - | chr5_1:55611072-55611091 | Msa0737990:intron | 40.0% |
| GTAGTACTAGTAAGGGATCT+CGG | + | chr5_1:55611245-55611264 | None:intergenic | 40.0% | |
| CTACTACTACCTTTGACTGT+AGG | - | chr5_1:55611261-55611280 | Msa0737990:CDS | 40.0% | |
| TCTAACATGTTCTGTTCTGC+AGG | - | chr5_1:55611330-55611349 | Msa0737990:CDS | 40.0% | |
| ! | TTCCAATGTAGGCTAGTTCT+TGG | - | chr5_1:55611449-55611468 | Msa0737990:CDS | 40.0% |
| ! | TACCAAGAACTAGCCTACAT+TGG | + | chr5_1:55611454-55611473 | None:intergenic | 40.0% |
| !! | GAGTTTTGGTATGTTGACCA+AGG | - | chr5_1:55611546-55611565 | Msa0737990:intron | 40.0% |
| GTATGTTGACCAAGGAATTG+TGG | - | chr5_1:55611554-55611573 | Msa0737990:intron | 40.0% | |
| CTGATTTCTCTTGCGAAAAG+AGG | + | chr5_1:55611601-55611620 | None:intergenic | 40.0% | |
| ! | CTTTTCGCAAGAGAAATCAG+CGG | - | chr5_1:55611601-55611620 | Msa0737990:intron | 40.0% |
| ! | ACATGGCTGCTTTCAGTATT+TGG | + | chr5_1:55611725-55611744 | None:intergenic | 40.0% |
| ! | AGCAATGCTGTTGATAGACA+TGG | + | chr5_1:55611742-55611761 | None:intergenic | 40.0% |
| ! | CAGCATTGCTTTAGATGACA+TGG | - | chr5_1:55611752-55611771 | Msa0737990:CDS | 40.0% |
| !! | AAGGGTATCCAAATACGACT+CGG | + | chr5_1:55611784-55611803 | None:intergenic | 40.0% |
| GTATTTGGATACCCTTCCTA+AGG | - | chr5_1:55611788-55611807 | Msa0737990:CDS | 40.0% | |
| CTCTAATGCAACATGCTCAT+TGG | + | chr5_1:55612091-55612110 | None:intergenic | 40.0% | |
| AGGATGACTTTGTAGTCGAA+CGG | + | chr5_1:55612188-55612207 | None:intergenic | 40.0% | |
| TTCGACTACAAAGTCATCCT+GGG | - | chr5_1:55612188-55612207 | Msa0737990:intron | 40.0% | |
| TAGCAAGATCCAATGCAACA+AGG | - | chr5_1:55612332-55612351 | Msa0737990:intron | 40.0% | |
| AGCATGAAACCTTGTTGCAT+TGG | + | chr5_1:55612344-55612363 | None:intergenic | 40.0% | |
| !!! | TTCAAGAGTTTTGGAGAGCA+TGG | - | chr5_1:55612753-55612772 | Msa0737990:CDS | 40.0% |
| TAGATTTCCATTGGCACCAA+TGG | - | chr5_1:55612840-55612859 | Msa0737990:intron | 40.0% | |
| !! | ATGTTAACCATTGGTGCCAA+TGG | + | chr5_1:55612850-55612869 | None:intergenic | 40.0% |
| ATTGGCACCAATGGTTAACA+TGG | - | chr5_1:55612849-55612868 | Msa0737990:intron | 40.0% | |
| GCCACTAATTAGTCCTTCAA+AGG | - | chr5_1:55612963-55612982 | Msa0737990:CDS | 40.0% | |
| ! | CCCTTTGAAGGACTAATTAG+TGG | + | chr5_1:55612967-55612986 | None:intergenic | 40.0% |
| AATTAGTCCTTCAAAGGGAG+AGG | - | chr5_1:55612969-55612988 | Msa0737990:CDS | 40.0% | |
| ATCATTAAACCTCAACGTCG+CGG | - | chr5_1:55613024-55613043 | Msa0737990:intron | 40.0% | |
| GTGTTGTCAAATTACCTTGG+AGG | - | chr5_1:55613063-55613082 | Msa0737990:intron | 40.0% | |
| GCAAGTCAAAATGATGTGTG+AGG | - | chr5_1:55613202-55613221 | Msa0737990:CDS | 40.0% | |
| TTGTCCCATTGAAGGACAAT+TGG | - | chr5_1:55613442-55613461 | Msa0737990:five_prime_UTR | 40.0% | |
| ! | AATGGGTCTTGTAGTTCCAC+TGG | - | chr5_1:55610102-55610121 | Msa0737990:three_prime_UTR | 45.0% |
| GACATAGTGCCCTTCCTAAT+AGG | + | chr5_1:55610186-55610205 | None:intergenic | 45.0% | |
| TGACTTTGTAGGATCAGGAG+GGG | - | chr5_1:55610425-55610444 | Msa0737990:CDS | 45.0% | |
| AGGTTTGCGAAGTTACTGCT+TGG | - | chr5_1:55610462-55610481 | Msa0737990:CDS | 45.0% | |
| ! | CTGCTTGGTGAAGATATGTC+AGG | - | chr5_1:55610477-55610496 | Msa0737990:CDS | 45.0% |
| GATATGTCAGGGTCTGGAAA+AGG | - | chr5_1:55610489-55610508 | Msa0737990:CDS | 45.0% | |
| AGTGGCAGAGAGAAATGGAT+TGG | - | chr5_1:55610754-55610773 | Msa0737990:intron | 45.0% | |
| TCCTGATGGTAGTAAGCTAG+AGG | - | chr5_1:55610830-55610849 | Msa0737990:intron | 45.0% | |
| ! | ACCTCTAGCTTACTACCATC+AGG | + | chr5_1:55610834-55610853 | None:intergenic | 45.0% |
| TTGTCGAGTTTACGTAGAGC+TGG | + | chr5_1:55611397-55611416 | None:intergenic | 45.0% | |
| ! | GTTGCACTGCTATGGAGTTT+TGG | - | chr5_1:55611532-55611551 | Msa0737990:intron | 45.0% |
| TCTTGAGTTCTCACTGAGAC+CGG | + | chr5_1:55611670-55611689 | None:intergenic | 45.0% | |
| ! | AGGGTATCCAAATACGACTC+GGG | + | chr5_1:55611783-55611802 | None:intergenic | 45.0% |
| TCAGAATGGAAGAACGTGCT+TGG | - | chr5_1:55611993-55612012 | Msa0737990:intron | 45.0% | |
| CAGAATGGAAGAACGTGCTT+GGG | - | chr5_1:55611994-55612013 | Msa0737990:intron | 45.0% | |
| ! | GTGGTTTAGAGTGAGATCTC+CGG | + | chr5_1:55612152-55612171 | None:intergenic | 45.0% |
| GTTCGACTACAAAGTCATCC+TGG | - | chr5_1:55612187-55612206 | Msa0737990:intron | 45.0% | |
| GGACATTGTGAAGGACTTCA+TGG | - | chr5_1:55612209-55612228 | Msa0737990:intron | 45.0% | |
| GTGAAGGACTTCATGGTTGA+TGG | - | chr5_1:55612216-55612235 | Msa0737990:intron | 45.0% | |
| AGTGGCACAGGTGAATAACT+AGG | + | chr5_1:55612949-55612968 | None:intergenic | 45.0% | |
| GAAGGACTAATTAGTGGCAC+AGG | + | chr5_1:55612961-55612980 | None:intergenic | 45.0% | |
| ATCTGAGCAACACGATCCAG+TGG | + | chr5_1:55610121-55610140 | None:intergenic | 50.0% | |
| GGTGAAGATATGTCAGGGTC+TGG | - | chr5_1:55610483-55610502 | Msa0737990:CDS | 50.0% | |
| CAGCAGGTAAATTGAGTCCC+TGG | + | chr5_1:55611092-55611111 | None:intergenic | 50.0% | |
| ! | CACGGATTGCCTACAGTCAA+AGG | + | chr5_1:55611273-55611292 | None:intergenic | 50.0% |
| !! | CATCTGGTGCCACAATTCCT+TGG | + | chr5_1:55611566-55611585 | None:intergenic | 50.0% |
| ATTGTGGCACCAGATGCAGA+TGG | - | chr5_1:55611570-55611589 | Msa0737990:intron | 50.0% | |
| CAAGAGAAATCAGCGGCAAG+AGG | - | chr5_1:55611608-55611627 | Msa0737990:intron | 50.0% | |
| GGAAGTTCCCGAGTCGTATT+TGG | - | chr5_1:55611773-55611792 | Msa0737990:CDS | 50.0% | |
| GCACTCTTGAGAGAACTGCT+CGG | + | chr5_1:55612046-55612065 | None:intergenic | 50.0% | |
| CCGGCGCCATACATAAATTG+CGG | + | chr5_1:55612133-55612152 | None:intergenic | 50.0% | |
| CCGCAATTTATGTATGGCGC+CGG | - | chr5_1:55612130-55612149 | Msa0737990:intron | 50.0% | |
| GAACGGCTAGGATAAAGTGG+TGG | + | chr5_1:55612171-55612190 | None:intergenic | 50.0% | |
| GTCGAACGGCTAGGATAAAG+TGG | + | chr5_1:55612174-55612193 | None:intergenic | 50.0% | |
| GACTTTGTAGTCGAACGGCT+AGG | + | chr5_1:55612183-55612202 | None:intergenic | 50.0% | |
| GTCATCCTGGGACATTGTGA+AGG | - | chr5_1:55612200-55612219 | Msa0737990:intron | 50.0% | |
| GAAGTCCTTCACAATGTCCC+AGG | + | chr5_1:55612208-55612227 | None:intergenic | 50.0% | |
| TTCATTGAAGCAGCGCTTCC+CGG | - | chr5_1:55612284-55612303 | Msa0737990:intron | 50.0% | |
| GGAGTTACCTCTCCCTTTGA+AGG | + | chr5_1:55612979-55612998 | None:intergenic | 50.0% | |
| ! | AAACCTCAACGTCGCGGTTT+TGG | - | chr5_1:55613030-55613049 | Msa0737990:intron | 50.0% |
| CTGCTTTCATCTCTCCTCCA+AGG | + | chr5_1:55613080-55613099 | None:intergenic | 50.0% | |
| GAGGCTGATCCATCTGCATC+TGG | + | chr5_1:55611582-55611601 | None:intergenic | 55.0% | |
| ATCAGCGGCAAGAGGAGAAG+TGG | - | chr5_1:55611616-55611635 | Msa0737990:intron | 55.0% | |
| TCATTGAAGCAGCGCTTCCC+GGG | - | chr5_1:55612285-55612304 | Msa0737990:intron | 55.0% | |
| ACACCAAAACCGCGACGTTG+AGG | + | chr5_1:55613036-55613055 | None:intergenic | 55.0% | |
| AGCGGCAAGAGGAGAAGTGG+TGG | - | chr5_1:55611619-55611638 | Msa0737990:intron | 60.0% | |
| TTCTCACTGAGACCGGCAGG+AGG | + | chr5_1:55611663-55611682 | None:intergenic | 60.0% | |
| GAGTTCTCACTGAGACCGGC+AGG | + | chr5_1:55611666-55611685 | None:intergenic | 60.0% | |
| ! | CAGGAGGCACACGGGGTACT+GGG | + | chr5_1:55611647-55611666 | None:intergenic | 65.0% |
| ! | TGAGACCGGCAGGAGGCACA+CGG | + | chr5_1:55611656-55611675 | None:intergenic | 65.0% |
| ! | GCAGGAGGCACACGGGGTAC+TGG | + | chr5_1:55611648-55611667 | None:intergenic | 70.0% |
| GTACCCCGTGTGCCTCCTGC+CGG | - | chr5_1:55611648-55611667 | Msa0737990:intron | 70.0% | |
| ! | AGACCGGCAGGAGGCACACG+GGG | + | chr5_1:55611654-55611673 | None:intergenic | 70.0% |
| ! | GAGACCGGCAGGAGGCACAC+GGG | + | chr5_1:55611655-55611674 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 55609955 | 55613515 | 55609955 | ID=Msa0737990;Name=Msa0737990 |
| chr5_1 | mRNA | 55609955 | 55613515 | 55609955 | ID=Msa0737990-mRNA-1;Parent=Msa0737990;Name=Msa0737990-mRNA-1;_AED=0.05;_eAED=0.05;_QI=102|1|1|1|1|1|7|300|576 |
| chr5_1 | exon | 55609955 | 55610746 | 55609955 | ID=Msa0737990-mRNA-1:exon:15713;Parent=Msa0737990-mRNA-1 |
| chr5_1 | exon | 55611117 | 55611473 | 55611117 | ID=Msa0737990-mRNA-1:exon:15712;Parent=Msa0737990-mRNA-1 |
| chr5_1 | exon | 55611661 | 55611951 | 55611661 | ID=Msa0737990-mRNA-1:exon:15711;Parent=Msa0737990-mRNA-1 |
| chr5_1 | exon | 55612044 | 55612118 | 55612044 | ID=Msa0737990-mRNA-1:exon:15710;Parent=Msa0737990-mRNA-1 |
| chr5_1 | exon | 55612619 | 55612773 | 55612619 | ID=Msa0737990-mRNA-1:exon:15709;Parent=Msa0737990-mRNA-1 |
| chr5_1 | exon | 55612912 | 55613034 | 55612912 | ID=Msa0737990-mRNA-1:exon:15708;Parent=Msa0737990-mRNA-1 |
| chr5_1 | exon | 55613176 | 55613515 | 55613176 | ID=Msa0737990-mRNA-1:exon:15707;Parent=Msa0737990-mRNA-1 |
| chr5_1 | five_prime_UTR | 55613414 | 55613515 | 55613414 | ID=Msa0737990-mRNA-1:five_prime_utr;Parent=Msa0737990-mRNA-1 |
| chr5_1 | CDS | 55613176 | 55613413 | 55613176 | ID=Msa0737990-mRNA-1:cds;Parent=Msa0737990-mRNA-1 |
| chr5_1 | CDS | 55612912 | 55613034 | 55612912 | ID=Msa0737990-mRNA-1:cds;Parent=Msa0737990-mRNA-1 |
| chr5_1 | CDS | 55612619 | 55612773 | 55612619 | ID=Msa0737990-mRNA-1:cds;Parent=Msa0737990-mRNA-1 |
| chr5_1 | CDS | 55612044 | 55612118 | 55612044 | ID=Msa0737990-mRNA-1:cds;Parent=Msa0737990-mRNA-1 |
| chr5_1 | CDS | 55611661 | 55611951 | 55611661 | ID=Msa0737990-mRNA-1:cds;Parent=Msa0737990-mRNA-1 |
| chr5_1 | CDS | 55611117 | 55611473 | 55611117 | ID=Msa0737990-mRNA-1:cds;Parent=Msa0737990-mRNA-1 |
| chr5_1 | CDS | 55610255 | 55610746 | 55610255 | ID=Msa0737990-mRNA-1:cds;Parent=Msa0737990-mRNA-1 |
| chr5_1 | three_prime_UTR | 55609955 | 55610254 | 55609955 | ID=Msa0737990-mRNA-1:three_prime_utr;Parent=Msa0737990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
