AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0272260


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0272260 MtrunA17_Chr2g0280421 95.426 787 11 1 1 762 1 787 0.0 1536
Msa0272260 MtrunA17_Chr4g0042061 57.874 762 276 6 37 761 39 792 0.0 839
Msa0272260 MtrunA17_Chr2g0319271 57.461 764 277 8 37 761 6 760 0.0 835
Msa0272260 MtrunA17_Chr4g0049011 58.533 709 196 9 56 748 3 629 0.0 773
Msa0272260 MtrunA17_Chr2g0312631 42.298 409 225 6 343 749 318 717 1.15e-91 309
Msa0272260 MtrunA17_Chr7g0271961 46.479 355 169 7 400 747 389 729 1.21e-90 305
Msa0272260 MtrunA17_Chr7g0272871 45.610 410 207 8 346 752 66 462 1.35e-90 300
Msa0272260 MtrunA17_Chr1g0191851 47.486 358 175 7 399 752 134 482 2.25e-89 297
Msa0272260 MtrunA17_Chr1g0195111 43.836 365 169 9 400 747 384 729 3.04e-87 296
Msa0272260 MtrunA17_Chr1g0192481 43.767 361 176 8 400 747 46 392 1.14e-84 280
Msa0272260 MtrunA17_Chr5g0411971 44.236 373 199 7 378 749 365 729 8.62e-84 288
Msa0272260 MtrunA17_Chr5g0421591 43.164 373 203 7 378 749 340 704 6.79e-82 280
Msa0272260 MtrunA17_Chr5g0421521 43.164 373 203 7 378 749 340 704 9.14e-82 281
Msa0272260 MtrunA17_Chr5g0407791 32.576 660 353 17 132 753 616 1221 4.99e-80 279
Msa0272260 MtrunA17_Chr3g0102921 36.876 461 228 12 329 744 339 781 7.65e-78 271
Msa0272260 MtrunA17_Chr5g0447041 37.924 472 201 14 339 744 361 806 3.45e-77 270
Msa0272260 MtrunA17_Chr8g0369881 31.579 646 362 17 116 753 634 1207 6.47e-77 270
Msa0272260 MtrunA17_Chr7g0257301 36.975 476 245 12 313 747 288 749 1.64e-75 264
Msa0272260 MtrunA17_Chr1g0191181 38.619 391 216 7 364 742 36 414 1.14e-68 238
Msa0272260 MtrunA17_Chr4g0045381 40.286 350 175 10 409 737 190 526 6.25e-60 221
Msa0272260 MtrunA17_Chr2g0322291 43.854 301 139 7 458 737 130 421 9.92e-59 216
Msa0272260 MtrunA17_Chr4g0069141 38.950 362 175 9 403 737 144 486 7.60e-58 214
Msa0272260 MtrunA17_Chr2g0327581 38.244 353 196 10 403 737 39 387 4.48e-57 211
Msa0272260 MtrunA17_Chr8g0367581 39.167 360 200 8 399 756 133 475 5.82e-57 211
Msa0272260 MtrunA17_Chr1g0178411 38.244 353 182 12 412 737 13 356 7.97e-56 207
Msa0272260 MtrunA17_Chr3g0122121 39.080 348 175 11 413 737 99 432 3.49e-55 206
Msa0272260 MtrunA17_Chr7g0266631 36.461 373 211 9 412 762 9 377 4.87e-55 204
Msa0272260 MtrunA17_Chr1g0193221 36.232 345 185 9 413 741 4 329 6.15e-54 202
Msa0272260 MtrunA17_Chr1g0182151 38.150 346 188 11 412 737 54 393 4.20e-53 199
Msa0272260 MtrunA17_Chr8g0377731 37.088 364 190 11 398 738 40 387 6.12e-53 199
Msa0272260 MtrunA17_Chr1g0152231 36.628 344 181 10 413 737 4 329 2.09e-50 189
Msa0272260 MtrunA17_Chr3g0134191 36.464 362 184 10 413 738 9 360 2.19e-49 187
Msa0272260 MtrunA17_Chr1g0153061 36.288 361 186 9 413 738 9 360 1.35e-48 185
Msa0272260 MtrunA17_Chr5g0427481 34.181 354 188 9 413 738 18 354 3.34e-48 184
Msa0272260 MtrunA17_Chr5g0398521 34.072 361 198 10 409 742 54 401 1.00e-47 182
Msa0272260 MtrunA17_Chr2g0307481 40.351 285 154 7 458 737 119 392 7.42e-47 177
Msa0272260 MtrunA17_Chr4g0053211 33.784 370 197 10 412 742 12 372 2.14e-46 179
Msa0272260 MtrunA17_Chr7g0269681 48.023 177 92 0 571 747 23 199 3.39e-46 172
Msa0272260 MtrunA17_Chr3g0132921 34.097 349 194 10 412 737 9 344 1.08e-45 171
Msa0272260 MtrunA17_Chr5g0445211 35.475 358 189 11 405 738 67 406 1.18e-45 176
Msa0272260 MtrunA17_Chr4g0035661 35.860 343 198 10 410 747 87 412 5.61e-45 174
Msa0272260 MtrunA17_Chr7g0245931 35.065 308 169 7 457 742 97 395 6.14e-44 171
Msa0272260 MtrunA17_Chr3g0145071 35.294 340 200 9 412 747 99 422 1.07e-43 170
Msa0272260 MtrunA17_Chr8g0386891 52.667 150 71 0 598 747 13 162 1.56e-43 162
Msa0272260 MtrunA17_Chr6g0484501 50.299 167 83 0 581 747 26 192 2.65e-43 157
Msa0272260 MtrunA17_Chr6g0483701 35.191 341 182 10 413 737 31 348 5.48e-43 168
Msa0272260 MtrunA17_Chr4g0062291 37.884 293 167 7 458 745 176 458 1.05e-42 165
Msa0272260 MtrunA17_Chr3g0101021 33.714 350 194 10 412 740 75 407 1.84e-42 166
Msa0272260 MtrunA17_Chr7g0258991 35.000 340 199 10 410 743 71 394 7.44e-42 164
Msa0272260 MtrunA17_Chr4g0070001 33.508 382 209 12 384 742 112 471 1.50e-40 160
Msa0272260 MtrunA17_Chr4g0036001 32.584 356 216 8 390 736 1 341 1.72e-39 157
Msa0272260 MtrunA17_Chr8g0390991 51.572 159 77 0 589 747 4 162 8.82e-39 152
Msa0272260 MtrunA17_Chr8g0372171 32.647 340 192 8 413 736 20 338 2.74e-38 153
Msa0272260 MtrunA17_Chr5g0405181 32.059 340 194 8 413 736 21 339 6.26e-38 152
Msa0272260 MtrunA17_Chr2g0331761 35.948 306 170 10 447 744 224 511 1.28e-37 150
Msa0272260 MtrunA17_Chr6g0485471 35.714 322 181 10 447 760 154 457 2.83e-37 149
Msa0272260 MtrunA17_Chr3g0142261 34.627 335 191 9 413 736 20 337 1.09e-36 149
Msa0272260 MtrunA17_Chr7g0238581 33.923 339 193 11 413 737 26 347 1.16e-36 146
Msa0272260 MtrunA17_Chr8g0390981 36.184 304 137 13 280 571 414 672 4.63e-35 142
Msa0272260 MtrunA17_Chr2g0295881 32.099 405 229 12 370 748 157 541 1.19e-34 142
Msa0272260 MtrunA17_Chr7g0269691 36.546 249 123 9 340 571 326 556 3.80e-34 138
Msa0272260 MtrunA17_Chr6g0484511 43.094 181 77 6 400 568 277 443 9.55e-34 135
Msa0272260 MtrunA17_Chr4g0067421 31.844 358 206 11 413 748 206 547 2.47e-33 137
Msa0272260 MtrunA17_Chr8g0386901 42.632 190 72 8 397 568 468 638 1.05e-31 131
Msa0272260 MtrunA17_Chr1g0187411 31.016 374 206 15 413 757 131 481 1.32e-27 119
Msa0272260 MtrunA17_Chr6g0470541 29.562 274 171 11 451 720 46 301 1.39e-17 87.8
Msa0272260 MtrunA17_Chr3g0142841 27.562 283 149 9 460 716 145 397 5.39e-17 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0272260 AT4G21270.1 62.172 801 256 8 1 762 1 793 0.0 964
Msa0272260 AT4G05190.1 62.095 802 252 10 1 762 1 790 0.0 961
Msa0272260 AT4G05190.2 63.103 767 239 7 34 762 17 777 0.0 947
Msa0272260 AT5G54670.1 56.037 762 289 5 35 762 5 754 0.0 811
Msa0272260 AT5G54670.2 56.037 762 289 5 35 762 5 754 0.0 811
Msa0272260 AT4G27180.1 55.571 736 280 6 62 762 22 745 0.0 779
Msa0272260 AT4G27180.2 55.571 736 280 6 62 762 22 745 0.0 779
Msa0272260 AT5G54670.3 57.730 705 252 5 92 762 2 694 0.0 777
Msa0272260 AT1G73860.2 47.139 367 176 6 400 758 414 770 1.61e-94 315
Msa0272260 AT1G73860.1 47.027 370 178 6 397 758 494 853 4.72e-93 313
Msa0272260 AT1G72250.2 46.277 376 186 7 379 749 470 834 1.16e-90 309
Msa0272260 AT1G72250.1 46.277 376 186 7 379 749 461 825 1.31e-90 309
Msa0272260 AT1G72250.4 46.277 376 186 7 379 749 481 845 1.31e-90 309
Msa0272260 AT1G72250.3 46.277 376 186 7 379 749 482 846 1.49e-90 309
Msa0272260 AT5G27550.2 46.438 379 194 6 376 752 96 467 1.55e-90 301
Msa0272260 AT5G27550.1 46.438 379 194 6 376 752 96 467 1.55e-90 301
Msa0272260 AT5G27000.1 42.518 421 221 11 333 747 322 727 7.62e-90 303
Msa0272260 AT1G09170.4 40.952 420 227 9 338 747 358 766 1.99e-89 300
Msa0272260 AT1G09170.3 40.952 420 227 9 338 747 358 766 2.58e-89 298
Msa0272260 AT1G09170.7 40.952 420 227 9 338 747 358 766 2.58e-89 298
Msa0272260 AT2G47500.2 40.047 422 238 7 333 747 317 730 2.68e-89 301
Msa0272260 AT2G47500.1 40.047 422 238 7 333 747 317 730 3.93e-89 301
Msa0272260 AT1G09170.2 40.952 420 227 9 338 747 358 766 7.75e-89 299
Msa0272260 AT1G18410.3 45.954 346 184 3 400 744 477 820 2.41e-88 300
Msa0272260 AT1G18410.2 45.954 346 184 3 400 744 477 820 2.41e-88 300
Msa0272260 AT1G09170.5 40.952 420 227 9 338 747 358 766 2.76e-88 300
Msa0272260 AT1G63640.5 35.325 569 339 15 194 744 236 793 8.45e-88 299
Msa0272260 AT1G63640.3 35.325 569 339 15 194 744 246 803 8.97e-88 299
Msa0272260 AT1G63640.1 35.325 569 339 15 194 744 246 803 9.79e-88 299
Msa0272260 AT1G63640.4 35.325 569 339 15 194 744 246 803 9.79e-88 299
Msa0272260 AT1G63640.2 35.325 569 332 15 194 744 246 796 5.62e-87 297
Msa0272260 AT1G18410.5 45.272 349 180 3 397 744 464 802 1.71e-86 294
Msa0272260 AT1G18410.4 45.845 349 186 3 397 744 617 963 1.72e-86 297
Msa0272260 AT2G22610.3 45.763 354 181 6 399 750 405 749 2.35e-86 295
Msa0272260 AT2G22610.1 45.763 354 181 6 399 750 404 748 2.54e-86 295
Msa0272260 AT2G22610.2 45.763 354 181 6 399 750 404 748 3.12e-86 295
Msa0272260 AT1G18410.1 45.272 349 180 3 397 744 617 955 8.22e-85 292
Msa0272260 AT5G41310.1 37.525 509 243 14 271 747 273 738 1.71e-84 288
Msa0272260 AT3G10310.2 42.655 354 188 6 400 747 351 695 3.04e-80 277
Msa0272260 AT3G10310.1 42.655 354 188 6 400 747 351 695 3.35e-80 276
Msa0272260 AT3G44730.1 40.997 361 182 6 402 747 367 711 7.33e-80 277
Msa0272260 AT3G44730.4 40.997 361 182 6 402 747 367 711 7.33e-80 277
Msa0272260 AT3G44730.2 40.997 361 182 6 402 747 412 756 9.93e-80 278
Msa0272260 AT3G44730.3 40.997 361 182 6 402 747 412 756 9.93e-80 278
Msa0272260 AT5G65930.3 39.946 373 209 7 384 753 866 1226 5.38e-78 274
Msa0272260 AT5G65930.2 39.946 373 209 7 384 753 860 1220 5.80e-78 273
Msa0272260 AT5G65930.1 39.946 373 209 7 384 753 859 1219 6.53e-78 273
Msa0272260 AT1G09170.1 38.902 419 201 9 338 747 358 730 1.22e-76 267
Msa0272260 AT1G55550.1 39.566 369 204 6 381 744 60 414 3.74e-75 261
Msa0272260 AT1G09170.6 40.263 380 206 9 338 707 358 726 1.18e-74 257
Msa0272260 AT1G09170.8 40.263 380 206 9 338 707 358 726 1.18e-74 257
Msa0272260 AT5G27950.1 38.118 425 225 11 335 742 2 405 2.17e-72 248
Msa0272260 AT3G19050.1 40.227 353 171 9 409 737 190 526 2.35e-59 219
Msa0272260 AT3G17360.1 39.595 346 177 8 412 737 168 501 4.81e-59 218
Msa0272260 AT3G17360.2 39.595 346 177 8 412 737 168 501 4.86e-59 218
Msa0272260 AT3G45850.2 39.535 344 185 10 412 737 55 393 4.87e-59 217
Msa0272260 AT3G45850.1 39.535 344 185 10 412 737 55 393 4.87e-59 217
Msa0272260 AT3G17360.3 39.595 346 177 8 412 737 168 501 5.14e-59 218
Msa0272260 AT5G65460.2 33.813 417 251 6 340 756 76 467 7.41e-59 217
Msa0272260 AT5G65460.6 33.813 417 251 6 340 756 76 467 1.16e-58 216
Msa0272260 AT5G65460.4 33.813 417 251 6 340 756 76 467 1.71e-58 216
Msa0272260 AT5G65460.1 33.813 417 251 6 340 756 76 467 1.72e-58 216
Msa0272260 AT5G65460.3 33.492 421 254 6 340 756 76 474 4.57e-58 215
Msa0272260 AT5G10470.1 33.716 436 250 8 346 758 58 477 4.31e-56 209
Msa0272260 AT5G10470.2 33.716 436 250 8 346 758 58 477 4.31e-56 209
Msa0272260 AT3G44050.1 39.826 344 179 9 412 737 93 426 4.55e-56 209
Msa0272260 AT2G28620.3 38.261 345 188 10 412 737 50 388 8.50e-55 204
Msa0272260 AT2G28620.2 38.261 345 188 10 412 737 50 388 8.50e-55 204
Msa0272260 AT2G28620.1 38.261 345 188 10 412 737 50 388 8.66e-55 204
Msa0272260 AT2G36200.1 37.666 377 201 12 412 762 12 380 1.30e-54 204
Msa0272260 AT2G36200.2 37.401 377 202 11 412 762 12 380 2.07e-54 203
Msa0272260 AT4G14150.1 38.218 348 177 12 413 738 92 423 5.70e-53 199
Msa0272260 AT2G37420.1 36.735 343 196 9 412 737 48 386 7.49e-52 196
Msa0272260 AT2G37420.2 36.735 343 196 9 412 737 48 386 7.49e-52 196
Msa0272260 AT3G10180.2 35.362 345 189 8 413 741 4 330 2.24e-51 194
Msa0272260 AT3G10180.1 35.362 345 189 8 413 741 4 330 2.55e-51 194
Msa0272260 AT1G59540.1 37.500 336 181 11 413 737 4 321 4.23e-51 192
Msa0272260 AT3G23670.2 37.356 348 180 10 413 738 97 428 7.13e-51 192
Msa0272260 AT3G23670.1 37.356 348 180 10 413 738 97 428 1.24e-50 192
Msa0272260 AT4G39050.1 36.034 358 209 9 396 749 82 423 2.36e-48 185
Msa0272260 AT3G63480.2 37.135 342 185 13 412 737 3 330 1.26e-47 176
Msa0272260 AT2G21380.2 36.390 349 198 10 405 747 97 427 1.31e-47 182
Msa0272260 AT2G21380.1 36.390 349 198 10 405 747 97 427 1.31e-47 182
Msa0272260 AT5G47820.2 35.246 366 187 12 412 737 11 366 1.47e-47 182
Msa0272260 AT5G47820.1 35.246 366 187 12 412 737 11 366 1.47e-47 182
Msa0272260 AT3G54870.2 36.577 298 163 7 457 737 149 437 1.70e-47 182
Msa0272260 AT3G54870.1 36.577 298 163 7 457 737 149 437 1.75e-47 182
Msa0272260 AT3G54870.3 36.577 298 163 7 457 737 149 437 1.81e-47 182
Msa0272260 AT3G63480.1 36.994 346 184 14 412 737 3 334 9.58e-47 173
Msa0272260 AT1G12430.1 33.989 356 196 10 413 742 71 413 9.68e-47 179
Msa0272260 AT1G12430.2 33.989 356 196 10 413 742 71 413 1.02e-46 179
Msa0272260 AT1G21730.1 36.232 345 198 9 409 747 72 400 1.71e-45 176
Msa0272260 AT3G50240.1 34.626 361 190 10 413 737 26 376 7.37e-45 174
Msa0272260 AT3G50240.4 34.626 361 190 10 413 737 26 376 8.52e-45 174
Msa0272260 AT5G06670.2 34.402 343 203 10 407 743 61 387 9.36e-45 174
Msa0272260 AT5G06670.3 34.402 343 203 10 407 743 61 387 9.36e-45 174
Msa0272260 AT1G18550.1 38.380 284 161 6 458 737 204 477 1.20e-44 172
Msa0272260 AT3G50240.2 34.626 361 190 10 413 737 26 376 1.26e-44 173
Msa0272260 AT1G01950.2 33.611 360 200 9 409 742 57 403 1.80e-44 172
Msa0272260 AT1G01950.1 33.611 360 200 9 409 742 57 403 2.22e-44 172
Msa0272260 AT1G01950.3 33.611 360 200 9 409 742 57 403 3.22e-44 172
Msa0272260 AT5G06670.5 34.402 343 203 10 407 743 61 387 3.71e-44 171
Msa0272260 AT5G06670.8 34.402 343 203 10 407 743 61 387 6.09e-44 170
Msa0272260 AT5G06670.4 34.402 343 203 10 407 743 61 387 6.09e-44 170
Msa0272260 AT5G06670.7 34.402 343 203 10 407 743 61 387 6.09e-44 170
Msa0272260 AT1G18370.1 36.070 341 179 11 413 737 32 349 1.03e-43 171
Msa0272260 AT5G60930.3 33.702 362 193 12 413 738 7 357 2.37e-43 170
Msa0272260 AT5G60930.2 33.702 362 193 12 413 738 7 357 2.95e-43 170
Msa0272260 AT5G06670.6 33.807 352 202 11 407 743 61 396 3.14e-43 169
Msa0272260 AT5G06670.1 33.807 352 202 11 407 743 61 396 3.14e-43 169
Msa0272260 AT5G60930.1 33.795 361 192 12 413 737 7 356 3.89e-43 169
Msa0272260 AT3G12020.4 33.824 340 203 9 410 743 67 390 8.51e-43 167
Msa0272260 AT3G12020.1 33.824 340 203 9 410 743 67 390 8.51e-43 167
Msa0272260 AT3G12020.3 33.824 340 203 9 410 743 67 390 3.12e-42 166
Msa0272260 AT3G12020.2 33.824 340 203 9 410 743 67 390 3.12e-42 166
Msa0272260 AT3G49650.1 35.505 307 183 6 458 760 66 361 2.86e-40 159
Msa0272260 AT3G51150.2 35.889 287 162 6 457 736 65 336 7.34e-40 159
Msa0272260 AT3G51150.4 35.889 287 162 6 457 736 65 336 7.34e-40 159
Msa0272260 AT3G51150.3 35.889 287 162 6 457 736 65 336 7.34e-40 159
Msa0272260 AT3G51150.1 35.889 287 162 6 457 736 65 336 9.06e-40 159
Msa0272260 AT3G43210.3 36.667 330 185 9 413 735 30 342 1.75e-39 157
Msa0272260 AT3G43210.5 36.667 330 185 9 413 735 30 342 1.75e-39 157
Msa0272260 AT3G43210.2 36.667 330 185 9 413 735 30 342 1.75e-39 157
Msa0272260 AT3G43210.4 36.667 330 185 9 413 735 30 342 1.75e-39 157
Msa0272260 AT3G43210.1 36.667 330 185 9 413 735 30 342 1.75e-39 157
Msa0272260 AT2G21300.2 31.944 360 211 10 390 735 1 340 1.09e-38 155
Msa0272260 AT2G21300.4 31.944 360 211 10 390 735 1 340 1.09e-38 155
Msa0272260 AT2G21300.3 31.944 360 211 10 390 735 1 340 1.09e-38 155
Msa0272260 AT2G21300.1 31.944 360 211 10 390 735 1 340 1.09e-38 155
Msa0272260 AT2G21300.5 31.944 360 211 10 390 735 1 340 1.09e-38 155
Msa0272260 AT5G66310.2 35.540 287 163 6 457 736 66 337 2.22e-38 154
Msa0272260 AT5G66310.3 35.540 287 163 6 457 736 66 337 2.22e-38 154
Msa0272260 AT5G66310.1 35.540 287 163 6 457 736 66 337 2.22e-38 154
Msa0272260 AT3G16060.1 35.948 306 170 9 447 744 208 495 1.12e-37 150
Msa0272260 AT4G24170.1 36.458 288 164 7 455 736 47 321 1.58e-37 151
Msa0272260 AT4G24170.2 36.458 288 164 7 455 736 47 321 1.58e-37 151
Msa0272260 AT5G27950.2 40.164 244 127 6 511 742 3 239 1.72e-37 146
Msa0272260 AT4G38950.3 33.832 334 194 9 413 736 14 330 1.86e-37 150
Msa0272260 AT4G38950.5 33.832 334 194 9 413 736 14 330 1.86e-37 150
Msa0272260 AT4G38950.4 33.832 334 194 9 413 736 14 330 1.86e-37 150
Msa0272260 AT4G38950.1 33.832 334 194 9 413 736 14 330 1.86e-37 150
Msa0272260 AT4G38950.2 33.832 334 194 9 413 736 14 330 1.86e-37 150
Msa0272260 AT3G20150.1 35.430 302 168 8 458 737 136 432 5.50e-37 150
Msa0272260 AT5G02370.1 32.440 336 198 10 412 737 20 336 6.09e-37 147
Msa0272260 AT3G20150.2 35.430 302 168 8 458 737 136 432 7.35e-37 149
Msa0272260 AT1G59540.2 39.496 238 129 7 506 737 1 229 4.15e-36 146
Msa0272260 AT1G01950.4 35.793 271 144 7 493 742 1 262 1.25e-35 145
Msa0272260 AT3G50240.3 36.201 279 143 7 497 742 3 279 1.01e-34 142
Msa0272260 AT4G14330.1 33.904 292 164 9 458 737 89 363 3.89e-31 131
Msa0272260 AT3G16630.2 32.372 312 175 8 447 740 232 525 7.93e-31 130
Msa0272260 AT3G16630.1 32.372 312 175 8 447 740 232 525 7.93e-31 130
Msa0272260 AT5G42490.2 34.764 233 132 5 457 684 55 272 2.68e-26 116
Msa0272260 AT5G42490.1 34.764 233 132 5 457 684 55 272 2.71e-26 116
Msa0272260 AT5G65460.5 33.945 218 135 2 539 756 13 221 5.70e-26 115
Msa0272260 AT3G51150.5 37.952 166 97 2 577 736 18 183 2.81e-20 96.7
Msa0272260 AT5G23910.1 27.483 302 195 11 438 738 37 315 4.30e-17 86.3
Msa0272260 AT5G23910.2 27.483 302 195 11 438 738 41 319 4.52e-17 86.3
Msa0272260 AT1G20060.2 27.368 285 181 7 448 718 153 425 1.00e-13 75.9
Msa0272260 AT1G20060.5 27.368 285 181 7 448 718 153 425 1.01e-13 75.9
Msa0272260 AT1G20060.6 27.368 285 181 7 448 718 153 425 1.02e-13 75.9
Msa0272260 AT1G20060.4 27.368 285 181 7 448 718 153 425 1.05e-13 75.5
Msa0272260 AT1G20060.8 27.368 285 181 7 448 718 153 425 1.07e-13 75.5
Msa0272260 AT1G20060.9 27.368 285 181 7 448 718 153 425 1.08e-13 75.5
Msa0272260 AT1G20060.10 27.368 285 181 7 448 718 153 425 1.15e-13 75.5
Msa0272260 AT1G20060.7 27.368 285 181 7 448 718 153 425 1.19e-13 75.5
Msa0272260 AT1G20060.3 27.368 285 181 7 448 718 153 425 1.25e-13 75.5

Find 195 sgRNAs with CRISPR-Local

Find 439 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTGCTCAGCTTCATTTC+TGG 0.062764 2_3:+3811122 None:intergenic
AAACTGTGTTAGATGGTTTA+AGG 0.187874 2_3:-3811993 Msa0272260:CDS
GAACTTAATGCATGCATTAT+TGG 0.191448 2_3:+3805748 None:intergenic
ATTATGTTAGGAATCGATTA+TGG 0.207331 2_3:+3812589 None:intergenic
ATTGACTGAGAAGATGAAAA+AGG 0.208674 2_3:-3812156 Msa0272260:CDS
CAGTACAAATAATAGTATTT+TGG 0.225304 2_3:+3806084 None:intergenic
TTGGTGCCCGATTCTGATTC+CGG 0.256816 2_3:+3812539 None:intergenic
ATGGCGGTTGGGAAAATGTT+AGG 0.278719 2_3:+3812615 None:intergenic
CACTTCCAGCAAGATCTATC+AGG 0.288224 2_3:+3806965 None:intergenic
GCTTATGGACAAACAGGTTC+TGG 0.290734 2_3:-3808256 Msa0272260:CDS
AAAGGAAGAATCAGATAAAT+TGG 0.295961 2_3:-3811273 Msa0272260:intron
TAAAGCTTCTACTTCCTCTT+TGG 0.301265 2_3:+3812178 None:intergenic
ATAATATTGTACTTCTTTCC+AGG 0.310435 2_3:+3807952 None:intergenic
AGGACACCTTAGTTTCATTC+AGG 0.324431 2_3:+3806908 None:intergenic
GTCTTTACTCTGCGAATTAG+TGG 0.328795 2_3:-3807108 Msa0272260:CDS
CTGTGTATATAGGAATTAAA+AGG 0.332956 2_3:-3809365 Msa0272260:intron
AAAATTGCACAACACTATTC+TGG 0.333020 2_3:-3809482 Msa0272260:intron
AGGAAGTGATGGAATGTTAT+AGG 0.339095 2_3:-3811158 Msa0272260:CDS
AGGGAAATCAAGTGAACAAT+TGG 0.342209 2_3:-3810198 Msa0272260:CDS
TGCAACTTCACAAGGTTGAT+TGG 0.344479 2_3:-3805837 Msa0272260:three_prime_UTR
ACGAGAATCAGAAGCCTTCA+TGG 0.347059 2_3:+3806161 None:intergenic
ATTCGTACGTTGGAGGGGCT+TGG 0.353658 2_3:+3812520 None:intergenic
CGAAGCACTTCATGTCTTCC+CGG 0.362319 2_3:-3812558 Msa0272260:exon
TTCGTAGAATGGATTATGTT+AGG 0.367569 2_3:+3812577 None:intergenic
ATTTGATAAAGTATTTAATC+AGG 0.371480 2_3:-3809071 Msa0272260:CDS
TTGTTAACAACAACATGGTT+TGG 0.375824 2_3:-3805799 Msa0272260:three_prime_UTR
GGACAAGTACAAGCTTTAAC+TGG 0.378100 2_3:-3810248 Msa0272260:CDS
AGCAAGGTCTGCTAGCAAAA+TGG 0.382662 2_3:-3806124 Msa0272260:three_prime_UTR
AAGAGGATCATGTCCCCTTC+AGG 0.390744 2_3:-3806740 Msa0272260:CDS
CAAATGTAAAAGAATACTTC+TGG 0.390932 2_3:+3809089 None:intergenic
CACCGTTTGTGTTTCCGAAA+AGG 0.391802 2_3:+3809594 None:intergenic
AGACGACCGTGATCGCCAAT+TGG 0.393122 2_3:-3810270 Msa0272260:CDS
TTCCTTTGGCAGCCATGTCT+TGG 0.398463 2_3:-3806315 Msa0272260:intron
TGGTGATAACAAATCCCTTA+TGG 0.398847 2_3:+3807984 None:intergenic
CTGTCGAAAAGTGGAGCAAC+TGG 0.402225 2_3:-3806937 Msa0272260:CDS
TTATGTTAGGAATCGATTAT+GGG 0.404543 2_3:+3812590 None:intergenic
TGCCGAAAAGGAGAAGTTAA+AGG 0.405884 2_3:-3810008 Msa0272260:intron
GCAAAATACAAAGAGTATAC+AGG 0.407369 2_3:-3810218 Msa0272260:CDS
TGGTGCCCGATTCTGATTCC+GGG 0.408148 2_3:+3812540 None:intergenic
GGTATCAAGCCTTTGAGCTC+CGG 0.414162 2_3:+3808199 None:intergenic
GTTGGGAAAATGTTAGGGTT+TGG 0.414279 2_3:+3812621 None:intergenic
GTGTTGTGTTGTTCTAAGTA+TGG 0.418879 2_3:-3806041 Msa0272260:three_prime_UTR
TTGGAGTGTTGTGTTGTGTT+GGG 0.419963 2_3:+3812640 None:intergenic
GCAGTACAATAGTAGCCTTC+AGG 0.425443 2_3:-3810860 Msa0272260:CDS
GATTTCCGCCCTTCTAAAAC+AGG 0.426509 2_3:-3807860 Msa0272260:CDS
ATGTCTCTCCTTCAATTACT+TGG 0.426819 2_3:+3809512 None:intergenic
CTGAAGAAAATAAGCGTAGA+AGG 0.427604 2_3:-3812334 Msa0272260:CDS
GGGGAATCCCCTTGATACTA+AGG 0.429097 2_3:-3812135 Msa0272260:intron
GTATCAAGCCTTTGAGCTCC+GGG 0.431755 2_3:+3808200 None:intergenic
TGGTTTAAGGTAGTTGAAGA+AGG 0.432648 2_3:-3811980 Msa0272260:CDS
TCTTGGTCGAGGTGTTGAAT+TGG 0.435479 2_3:-3809249 Msa0272260:CDS
ATATCACAGCTAAATGATAC+AGG 0.436257 2_3:+3805936 None:intergenic
CCTTCATCAACAGAAGCTCT+TGG 0.439950 2_3:-3809266 Msa0272260:CDS
AAGCTTGTACTTGTCCCAAT+TGG 0.441758 2_3:+3810255 None:intergenic
TGTTAACAACAACATGGTTT+GGG 0.442290 2_3:-3805798 Msa0272260:three_prime_UTR
AAATATACAACGAGACCATA+AGG 0.443809 2_3:-3807999 Msa0272260:CDS
GAAAATAAGCGTAGAAGGAT+TGG 0.450152 2_3:-3812329 Msa0272260:CDS
TGTTTCCGAAAAGGACAAAT+CGG 0.457287 2_3:+3809603 None:intergenic
CAGAAGCCTTCATGGATGTC+TGG 0.457701 2_3:+3806169 None:intergenic
TGTCTTCCCGGAATCAGAAT+CGG 0.460343 2_3:-3812546 Msa0272260:CDS
CTAGTACAAAGCGCGCTTGA+TGG 0.460432 2_3:-3809010 Msa0272260:CDS
TTTGGAGTGTTGTGTTGTGT+TGG 0.461040 2_3:+3812639 None:intergenic
CGATTATGGGAAATGGCGGT+TGG 0.462035 2_3:+3812603 None:intergenic
ACATGAAGTGCTTCGTAGAA+TGG 0.462754 2_3:+3812566 None:intergenic
TGGCGGTTGGGAAAATGTTA+GGG 0.463450 2_3:+3812616 None:intergenic
AGAGTAAATAGTTGTGAGAT+TGG 0.463792 2_3:-3806204 Msa0272260:CDS
CTAAACCTGATAGATCTTGC+TGG 0.466294 2_3:-3806970 Msa0272260:CDS
TCTGATTCTCGTTTAAGCTA+TGG 0.468570 2_3:-3806150 Msa0272260:CDS
TATACGATGATTGGCAGGCC+TGG 0.470233 2_3:-3808226 Msa0272260:CDS
AGAAAGATACCTTAGTATCA+AGG 0.474402 2_3:+3812126 None:intergenic
CTTTGGCAGCCATGTCTTGG+CGG 0.476725 2_3:-3806312 Msa0272260:intron
CCAAGAGCTTCTGTTGATGA+AGG 0.481684 2_3:+3809266 None:intergenic
CTCTCCAGTCGAAGATGGAT+CGG 0.481913 2_3:+3806254 None:intergenic
TAGGAATCGATTATGGGAAA+TGG 0.482171 2_3:+3812596 None:intergenic
GGTAGAGGTAGGGCTCCATT+AGG 0.483847 2_3:-3812284 Msa0272260:CDS
AGGCCTGCCAATCATCGTAT+AGG 0.484741 2_3:+3808228 None:intergenic
AAAGAGCTCCAAGTAATTGA+AGG 0.484829 2_3:-3809520 Msa0272260:CDS
AGTGTCTGATTTGTTGTTGA+GGG 0.484894 2_3:+3812259 None:intergenic
GACGACCGTGATCGCCAATT+GGG 0.489134 2_3:-3810269 Msa0272260:CDS
AAGGGGATTCGTACGTTGGA+GGG 0.490945 2_3:+3812514 None:intergenic
CTTGTCCCAATTGGCGATCA+CGG 0.491249 2_3:+3810264 None:intergenic
TAAACTGACAACCCTTCTCC+AGG 0.499188 2_3:-3806712 Msa0272260:intron
CAAGGCATTGCAAGAGCAGT+TGG 0.500827 2_3:-3810746 Msa0272260:CDS
ATGATCCTCTTTCTTTGCCA+AGG 0.501059 2_3:+3806752 None:intergenic
CGCAAACATCCACAATAGTC+AGG 0.502674 2_3:+3807893 None:intergenic
TAATCAGGAGGCTTCACAGC+AGG 0.503502 2_3:-3809056 Msa0272260:CDS
GAAGACCAGAAAAGAACTAT+AGG 0.503985 2_3:-3809568 Msa0272260:CDS
ATCTTAGGCTTCACAAGAAG+AGG 0.504465 2_3:-3810360 Msa0272260:intron
CTCAGATCCCTCGGTTGCAC+CGG 0.505367 2_3:+3812220 None:intergenic
TTATCACCAACAGAAAATCC+TGG 0.506217 2_3:-3807970 Msa0272260:CDS
CTGACTATTGTGGATGTTTG+CGG 0.506475 2_3:-3807892 Msa0272260:CDS
AAGGATTGGTGGTGAAAGAA+TGG 0.506993 2_3:-3812315 Msa0272260:CDS
AAGCTTAGCAAACCTGGAGA+AGG 0.509076 2_3:+3806700 None:intergenic
GAATTGAGCTTGTAGTGGCT+TGG 0.509237 2_3:-3805992 Msa0272260:three_prime_UTR
AACACTGAACAGCAGGTTCA+AGG 0.509784 2_3:-3806997 Msa0272260:CDS
CGATGGTCCTGCAGCAGACA+TGG 0.509803 2_3:-3809300 Msa0272260:CDS
GAAATCAGCTGCTGTGCGGC+AGG 0.510505 2_3:-3811058 Msa0272260:intron
GAAAGATACCTTAGTATCAA+GGG 0.511185 2_3:+3812127 None:intergenic
GCCGGTGCCGGTGCAACCGA+GGG 0.511321 2_3:-3812227 Msa0272260:CDS
AGTCAGTCTCTGAAAGATCA+AGG 0.511671 2_3:-3808148 Msa0272260:CDS
GTCTTCCCGGAATCAGAATC+GGG 0.512430 2_3:-3812545 Msa0272260:CDS
GCAGCAGTTGAATGCCGAAA+AGG 0.513553 2_3:-3810020 Msa0272260:CDS
GGTTTAAGGTAGTTGAAGAA+GGG 0.514193 2_3:-3811979 Msa0272260:CDS
TAAAACAGGCTGCACAAAGC+AGG 0.516505 2_3:-3807846 Msa0272260:intron
GATTATGGGAAATGGCGGTT+GGG 0.516978 2_3:+3812604 None:intergenic
TTGTACTAGCTGAGAAATCT+CGG 0.521444 2_3:+3809024 None:intergenic
TGCCGGTGCCGGTGCAACCG+AGG 0.521826 2_3:-3812228 Msa0272260:CDS
AGTGACTCTCCAGTCGAAGA+TGG 0.523019 2_3:+3806249 None:intergenic
TCTGCTGCAGGACCATCGTC+TGG 0.525629 2_3:+3809305 None:intergenic
ACTTCACAAGGTTGATTGGA+TGG 0.527446 2_3:-3805833 Msa0272260:three_prime_UTR
TTGGTGAATTCAATGATGCT+CGG 0.528027 2_3:+3812197 None:intergenic
TAGTACAAAGCGCGCTTGAT+GGG 0.529537 2_3:-3809009 Msa0272260:CDS
TGTGGCCTCTGACATTGCTA+AGG 0.529627 2_3:+3810770 None:intergenic
GATGCTCGGCTCAGATCCCT+CGG 0.531050 2_3:+3812211 None:intergenic
ACTAATGATGGTGCCGGTGC+CGG 0.531226 2_3:-3812239 Msa0272260:CDS
TCTCCAGTCGAAGATGGATC+GGG 0.533509 2_3:+3806255 None:intergenic
TTCTGGCTACTAGGAAGTGA+TGG 0.536458 2_3:-3811169 Msa0272260:intron
TCCCTCGGTTGCACCGGCAC+CGG 0.536812 2_3:+3812226 None:intergenic
AGTGAAAGGCTGTCGAAAAG+TGG 0.538792 2_3:-3806946 Msa0272260:CDS
ATCAAGCCTTTGAGCTCCGG+GGG 0.539773 2_3:+3808202 None:intergenic
GCGAATTAGTGGTGTTAATG+AGG 0.541828 2_3:-3807097 Msa0272260:intron
TGGTCGTACAAGGTAGAGGT+AGG 0.547218 2_3:-3812295 Msa0272260:CDS
AGAATGGTCGTACAAGGTAG+AGG 0.549823 2_3:-3812299 Msa0272260:CDS
AACAAATCAGACACTAATGA+TGG 0.550885 2_3:-3812251 Msa0272260:CDS
AGCTTAGCAAACCTGGAGAA+GGG 0.551332 2_3:+3806701 None:intergenic
GGGAAATCAAGTGAACAATT+GGG 0.552589 2_3:-3810197 Msa0272260:CDS
GTTGTGAGATTGGTATTCCT+CGG 0.552840 2_3:-3806194 Msa0272260:CDS
AAACCTATACGATGATTGGC+AGG 0.553852 2_3:-3808231 Msa0272260:CDS
TTGTTGTTGAGGGAACCTAA+TGG 0.555010 2_3:+3812269 None:intergenic
TCAACAGAAGCTCTTGGTCG+AGG 0.555040 2_3:-3809260 Msa0272260:CDS
ACATCCACAATAGTCAGGTC+CGG 0.563431 2_3:+3807898 None:intergenic
GAAACTACCATGTCTGCTGC+AGG 0.564380 2_3:+3809293 None:intergenic
TTTGTAGAACACTGAACAGC+AGG 0.565189 2_3:-3807004 Msa0272260:intron
AATATACAACGAGACCATAA+GGG 0.569199 2_3:-3807998 Msa0272260:CDS
GGACCGCCTGAATGAAACTA+AGG 0.569652 2_3:-3806914 Msa0272260:intron
GGTGAAAGAATGGTCGTACA+AGG 0.569997 2_3:-3812305 Msa0272260:CDS
GTCGAACGCGGCAGAACACA+CGG 0.575748 2_3:+3809336 None:intergenic
TTAATTCTTGCAACTTCACA+AGG 0.576531 2_3:-3805845 Msa0272260:three_prime_UTR
AATATTATACACGATGCCAA+TGG 0.576558 2_3:-3807937 Msa0272260:CDS
GAAGGGGATTCGTACGTTGG+AGG 0.576763 2_3:+3812513 None:intergenic
TTAGAGAATTGAGCTTGTAG+TGG 0.577572 2_3:-3805997 Msa0272260:three_prime_UTR
AGGTCAACTACGAGAGAGAC+TGG 0.580028 2_3:-3809548 Msa0272260:CDS
TCAGACACTAATGATGGTGC+CGG 0.580091 2_3:-3812245 Msa0272260:CDS
AGCTAAAACAAATGCTCTCG+AGG 0.580303 2_3:-3810165 Msa0272260:intron
TGTCGAAAAGTGGAGCAACT+GGG 0.581699 2_3:-3806936 Msa0272260:CDS
GTCAGTTTAGAATTCCTGAA+GGG 0.584164 2_3:+3806726 None:intergenic
TTAGAATCTCCGCCAAGACA+TGG 0.584572 2_3:+3806303 None:intergenic
TCACCCGATCCATCTTCGAC+TGG 0.584762 2_3:-3806258 Msa0272260:CDS
CTGCGTCAAGATTTGCCTGA+AGG 0.585255 2_3:+3810845 None:intergenic
TGATAAAGTATTTAATCAGG+AGG 0.586161 2_3:-3809068 Msa0272260:CDS
TTTAGAAGAGAAAATTGCAA+AGG 0.586691 2_3:-3811291 Msa0272260:intron
TTCACAAGAAGAGGCTACAA+AGG 0.587878 2_3:-3810351 Msa0272260:CDS
CAAAATACAAAGAGTATACA+GGG 0.590113 2_3:-3810217 Msa0272260:CDS
CTCACAACTATTTACTCTCG+CGG 0.590699 2_3:+3806209 None:intergenic
AATAAGCGTAGAAGGATTGG+TGG 0.592815 2_3:-3812326 Msa0272260:CDS
AAGCGCGCTTGATGGGTACA+AGG 0.593192 2_3:-3809002 Msa0272260:intron
TAGTGTCTGATTTGTTGTTG+AGG 0.594810 2_3:+3812258 None:intergenic
GGCTATCACTATAGCCTCAG+TGG 0.594865 2_3:-3805971 Msa0272260:three_prime_UTR
GCTCTTGCAATGCCTTGTTG+TGG 0.599091 2_3:+3810752 None:intergenic
CAAGAGCTTCTGTTGATGAA+GGG 0.602107 2_3:+3809267 None:intergenic
AGGGGATTCGTACGTTGGAG+GGG 0.603372 2_3:+3812515 None:intergenic
TAGATCTTGCTGGAAGTGAA+AGG 0.608964 2_3:-3806960 Msa0272260:CDS
GGACCATCGTCTGGTAGCAA+AGG 0.611454 2_3:+3809314 None:intergenic
CATCATTGAATTCACCAAAG+AGG 0.617313 2_3:-3812192 Msa0272260:CDS
TATCAAGCCTTTGAGCTCCG+GGG 0.618912 2_3:+3808201 None:intergenic
AGGGTGGAAGTACACAATGC+AGG 0.619320 2_3:-3808128 Msa0272260:intron
TGTCAGTTTAGAATTCCTGA+AGG 0.621418 2_3:+3806725 None:intergenic
CGACCTTTGCTACCAGACGA+TGG 0.622803 2_3:-3809317 Msa0272260:CDS
GTCAGTCTCTGAAAGATCAA+GGG 0.624613 2_3:-3808147 Msa0272260:CDS
TGTTCCGGACCTGACTATTG+TGG 0.626473 2_3:-3807902 Msa0272260:CDS
TCGGCGCCAGACATCCATGA+AGG 0.629291 2_3:-3806175 Msa0272260:CDS
TCAGTTTAGAATTCCTGAAG+GGG 0.630756 2_3:+3806727 None:intergenic
GTCGAAAAGTGGAGCAACTG+GGG 0.634783 2_3:-3806935 Msa0272260:CDS
GAATCGATTATGGGAAATGG+CGG 0.636934 2_3:+3812599 None:intergenic
ACACCTTAGTTTCATTCAGG+CGG 0.642954 2_3:+3806911 None:intergenic
TTCATGGATGTCTGGCGCCG+AGG 0.644854 2_3:+3806177 None:intergenic
AAAGATACCTTAGTATCAAG+GGG 0.645442 2_3:+3812128 None:intergenic
AGTCTCTGAAAGATCAAGGG+TGG 0.647555 2_3:-3808144 Msa0272260:CDS
CTGGTAGCAAAGGTCGAACG+CGG 0.648482 2_3:+3809324 None:intergenic
AGTACAAGCTTTAACTGGAG+AGG 0.648667 2_3:-3810243 Msa0272260:CDS
AACAGTTGTTAACAACAACA+TGG 0.649567 2_3:-3805804 Msa0272260:three_prime_UTR
GGTCGTACAAGGTAGAGGTA+GGG 0.649766 2_3:-3812294 Msa0272260:CDS
AAATCTTGACGCAGCCAGTG+CGG 0.651267 2_3:-3810836 Msa0272260:CDS
CAATGTCAGAGGCCACAACA+AGG 0.656086 2_3:-3810764 Msa0272260:CDS
GTGTTGTGTTGGGAAGAAGA+AGG 0.660426 2_3:+3812650 None:intergenic
GAGAACCTTAGCAATGTCAG+AGG 0.671074 2_3:-3810775 Msa0272260:CDS
CTTTCAGAGACTGACTAACG+AGG 0.676043 2_3:+3808155 None:intergenic
GTTTAAGCTATGGCTAAGCA+AGG 0.676128 2_3:-3806140 Msa0272260:exon
AGGAGGTATGTACTTCACAA+AGG 0.685991 2_3:-3810063 Msa0272260:CDS
TATCACAGCTAAATGATACA+GGG 0.688032 2_3:+3805937 None:intergenic
AATATCTGTTCAAGTGAACG+TGG 0.707805 2_3:+3808178 None:intergenic
GGTGTTGAATTGGCACAGAG+CGG 0.715490 2_3:-3809239 Msa0272260:intron
ATGAGAAATCAGCTGCTGTG+CGG 0.726142 2_3:-3811062 Msa0272260:CDS
TCAAGCCTTTGAGCTCCGGG+GGG 0.726851 2_3:+3808203 None:intergenic
GGGCATCAATAACACCACTG+AGG 0.797794 2_3:+3805957 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTTTCTTATATTAAAATT+TGG - chr2_3:3808528-3808547 Msa0272260:intron 10.0%
!! AGTAATGAAAATAAAATAAA+AGG + chr2_3:3811789-3811808 None:intergenic 10.0%
!!! AAACTATTTACTAAGTATTT+TGG + chr2_3:3806855-3806874 None:intergenic 15.0%
!! TAAAGTAAGTTATTTAATGT+TGG - chr2_3:3807725-3807744 Msa0272260:intron 15.0%
!! ATAATACTTAATCAGTAAAA+TGG + chr2_3:3808321-3808340 None:intergenic 15.0%
!! TTCTTATATTAAAATTTGGA+TGG - chr2_3:3808532-3808551 Msa0272260:intron 15.0%
!!! CATAAAATAGAATATGATTT+TGG - chr2_3:3808572-3808591 Msa0272260:intron 15.0%
!!! TTTTTTTCAAGTTTAACTAT+TGG - chr2_3:3808602-3808621 Msa0272260:intron 15.0%
!!! TAAATCCAAATATTTTTAAC+AGG - chr2_3:3808713-3808732 Msa0272260:intron 15.0%
!!! AAATCCAAATATTTTTAACA+GGG - chr2_3:3808714-3808733 Msa0272260:intron 15.0%
!!! AACTTTATTTTTTTGTTAGA+TGG - chr2_3:3808815-3808834 Msa0272260:intron 15.0%
!!! ATTTGATAAAGTATTTAATC+AGG - chr2_3:3809370-3809389 Msa0272260:intron 15.0%
!!! TTCTGATTTTTTCTTTAAAA+AGG - chr2_3:3809800-3809819 Msa0272260:intron 15.0%
!! ATTTATTACTAGTTGATTAA+TGG + chr2_3:3811604-3811623 None:intergenic 15.0%
!!! AAATAATAGTATTTTGGTTA+TGG + chr2_3:3812354-3812373 None:intergenic 15.0%
!!! AATTTTTAGATGCAGAAAAA+AGG - chr2_3:3806076-3806095 Msa0272260:three_prime_UTR 20.0%
!!! ATTTTTAGATGCAGAAAAAA+GGG - chr2_3:3806077-3806096 Msa0272260:three_prime_UTR 20.0%
!!! TTTTGATTTGCAGAAAAAAA+TGG - chr2_3:3806394-3806413 Msa0272260:intron 20.0%
!! ATAAGTAGATTACTTATGAT+TGG - chr2_3:3806638-3806657 Msa0272260:intron 20.0%
!! AGGTTTATTATAGAACAATA+TGG - chr2_3:3806935-3806954 Msa0272260:CDS 20.0%
!!! TAATTTGTTTTAGTTCATCT+CGG + chr2_3:3808150-3808169 None:intergenic 20.0%
!!! AATCCAAATATTTTTAACAG+GGG - chr2_3:3808715-3808734 Msa0272260:intron 20.0%
!! TGAAATTCTTATAATCGTAA+AGG + chr2_3:3809302-3809321 None:intergenic 20.0%
!! AGGTAAAACAGAATATAAAT+TGG - chr2_3:3809521-3809540 Msa0272260:CDS 20.0%
!! GAATATAAATTGGAAACTAT+AGG - chr2_3:3809531-3809550 Msa0272260:CDS 20.0%
!! TAAGAAACAACTAAATTCTT+AGG + chr2_3:3809976-3809995 None:intergenic 20.0%
!!! TAGTTGTTTCTTAAAAAAAG+TGG - chr2_3:3809983-3810002 Msa0272260:intron 20.0%
!!! ATTTTGGTAAAATCTTTCTA+GGG - chr2_3:3810046-3810065 Msa0272260:CDS 20.0%
!!! TCATTATTTTGATTTGCATT+AGG - chr2_3:3810357-3810376 Msa0272260:intron 20.0%
!! TAGTTGAAAATGAATGATAT+TGG + chr2_3:3810746-3810765 None:intergenic 20.0%
!!! GTTAATTTTACTTGTTAACA+AGG + chr2_3:3811125-3811144 None:intergenic 20.0%
!!! ATGTTTTCATATAGTAAACA+TGG - chr2_3:3811172-3811191 Msa0272260:intron 20.0%
!! CATTAACGTTTAAAAATCAA+AGG + chr2_3:3811246-3811265 None:intergenic 20.0%
!! AGTAATAACAATGAAAATCA+AGG + chr2_3:3811556-3811575 None:intergenic 20.0%
!! CACATGATGTTAAAATTTAA+AGG + chr2_3:3811815-3811834 None:intergenic 20.0%
!!! CAGTACAAATAATAGTATTT+TGG + chr2_3:3812360-3812379 None:intergenic 20.0%
! TTATGTTAGGAATCGATTAT+GGG + chr2_3:3805854-3805873 None:intergenic 25.0%
! ATTATGTTAGGAATCGATTA+TGG + chr2_3:3805855-3805874 None:intergenic 25.0%
!! TTTCTAGATTTTACTCAAGT+AGG - chr2_3:3805979-3805998 Msa0272260:three_prime_UTR 25.0%
!! TTTTTAGATGCAGAAAAAAG+GGG - chr2_3:3806078-3806097 Msa0272260:three_prime_UTR 25.0%
!! CCTTTACTTATTTGTGTTTT+GGG - chr2_3:3806557-3806576 Msa0272260:intron 25.0%
!! CTGATTTTTATAGTTGCAAA+AGG - chr2_3:3806689-3806708 Msa0272260:intron 25.0%
! TCAATATATGACCAAATGAA+CGG - chr2_3:3806714-3806733 Msa0272260:CDS 25.0%
! TTTCGACTCAAATATAATCA+GGG - chr2_3:3806789-3806808 Msa0272260:CDS 25.0%
! TATTCCATCACTTAAACTTT+AGG - chr2_3:3806888-3806907 Msa0272260:intron 25.0%
! TTATCCTAAAGTTTAAGTGA+TGG + chr2_3:3806895-3806914 None:intergenic 25.0%
!! TTAGGATAATTGATAGTCTT+TGG - chr2_3:3806906-3806925 Msa0272260:intron 25.0%
!!! TTGATAGTCTTTGGTTTTTT+AGG - chr2_3:3806915-3806934 Msa0272260:CDS 25.0%
! TTTAGAAGAGAAAATTGCAA+AGG - chr2_3:3807150-3807169 Msa0272260:CDS 25.0%
! AAAGGAAGAATCAGATAAAT+TGG - chr2_3:3807168-3807187 Msa0272260:intron 25.0%
! AAGAATCAGATAAATTGGTA+TGG - chr2_3:3807173-3807192 Msa0272260:intron 25.0%
! CAAAAATCAACAATTACGAA+AGG + chr2_3:3807502-3807521 None:intergenic 25.0%
!! GTACAAATTTTCATTTTCAG+TGG + chr2_3:3807529-3807548 None:intergenic 25.0%
! TGATGTGTATTGTCAATATA+TGG - chr2_3:3807774-3807793 Msa0272260:intron 25.0%
! TTCTTCTTTGAATGATTTCT+TGG - chr2_3:3807880-3807899 Msa0272260:CDS 25.0%
! GAGTACATTGGATAATAATA+TGG - chr2_3:3807919-3807938 Msa0272260:CDS 25.0%
!! CTTAACAATGTTTTTCTCAT+TGG - chr2_3:3808040-3808059 Msa0272260:intron 25.0%
! CTAAGATAATAAGAAAGCAA+TGG + chr2_3:3808068-3808087 None:intergenic 25.0%
! CATTGCTTTCTTATTATCTT+AGG - chr2_3:3808066-3808085 Msa0272260:intron 25.0%
!! CAAAATACAAAGAGTATACA+GGG - chr2_3:3808224-3808243 Msa0272260:CDS 25.0%
! AGTCAGAAATATAATGAACA+CGG + chr2_3:3808350-3808369 None:intergenic 25.0%
!! ATATTTCTGACTTTACTTGT+AGG - chr2_3:3808358-3808377 Msa0272260:intron 25.0%
! TCCTATATTATCAGTTTCTT+TGG - chr2_3:3808499-3808518 Msa0272260:intron 25.0%
! TCCAAAGAAACTGATAATAT+AGG + chr2_3:3808503-3808522 None:intergenic 25.0%
! TTATCTTATTGATGAATAGC+TGG + chr2_3:3808696-3808715 None:intergenic 25.0%
! TTTACTTCTTCTTAACTGTT+TGG - chr2_3:3809008-3809027 Msa0272260:CDS 25.0%
! ATACGTATATCTGTGTATAT+AGG - chr2_3:3809066-3809085 Msa0272260:CDS 25.0%
! CTGTGTATATAGGAATTAAA+AGG - chr2_3:3809076-3809095 Msa0272260:CDS 25.0%
! TACATGAAACTTATTCAAGA+TGG + chr2_3:3809270-3809289 None:intergenic 25.0%
! CAAATCACTTAAAAATATGC+AGG - chr2_3:3809329-3809348 Msa0272260:CDS 25.0%
! CAAATGTAAAAGAATACTTC+TGG + chr2_3:3809355-3809374 None:intergenic 25.0%
!! TGATAAAGTATTTAATCAGG+AGG - chr2_3:3809373-3809392 Msa0272260:intron 25.0%
!!! TTTTTTGATGTGCAATGTTT+TGG - chr2_3:3809692-3809711 Msa0272260:intron 25.0%
!!! TGAAATGGATTATGTCATTT+TGG - chr2_3:3810030-3810049 Msa0272260:CDS 25.0%
!!! CATTTTGGTAAAATCTTTCT+AGG - chr2_3:3810045-3810064 Msa0272260:CDS 25.0%
! ACGAGAAAATATAACAGAAA+AGG + chr2_3:3810072-3810091 None:intergenic 25.0%
!!! CGTTATTATTTGTGTTGTTT+TGG - chr2_3:3810089-3810108 Msa0272260:intron 25.0%
! TGCAAATCAAAATAATGAGA+AGG + chr2_3:3810355-3810374 None:intergenic 25.0%
! ATAATATTGTACTTCTTTCC+AGG + chr2_3:3810492-3810511 None:intergenic 25.0%
!!! AACATATGTGTTTTTTCCAT+TGG + chr2_3:3810523-3810542 None:intergenic 25.0%
!!! AATTTTACTTGTTAACAAGG+AGG + chr2_3:3811122-3811141 None:intergenic 25.0%
! TCTTGTACATTGAAGAATTA+AGG + chr2_3:3811198-3811217 None:intergenic 25.0%
!!! CCATTTGACTCTATTTTTTT+AGG + chr2_3:3811859-3811878 None:intergenic 25.0%
! CCTAAAAAAATAGAGTCAAA+TGG - chr2_3:3811856-3811875 Msa0272260:intron 25.0%
! AGATACATGTTAGTTAAATG+GGG + chr2_3:3811949-3811968 None:intergenic 25.0%
! CAGATACATGTTAGTTAAAT+GGG + chr2_3:3811950-3811969 None:intergenic 25.0%
! TCAGATACATGTTAGTTAAA+TGG + chr2_3:3811951-3811970 None:intergenic 25.0%
!!! TAACTTTCTGTTTTTTCCTT+TGG - chr2_3:3811990-3812009 Msa0272260:CDS 25.0%
! ACAAAAGCCAATAATAAGTT+TGG + chr2_3:3812048-3812067 None:intergenic 25.0%
!! GAGTATATTTTCTTTTCCTT+TGG - chr2_3:3812072-3812091 Msa0272260:intron 25.0%
! AATGAGTAACTATTAACCAA+AGG + chr2_3:3812091-3812110 None:intergenic 25.0%
!!! AACTTTCTGTTTTTTTCCTT+TGG - chr2_3:3812112-3812131 Msa0272260:intron 25.0%
!! TTCGTAGAATGGATTATGTT+AGG + chr2_3:3805867-3805886 None:intergenic 30.0%
! TTTTAGATGCAGAAAAAAGG+GGG - chr2_3:3806079-3806098 Msa0272260:three_prime_UTR 30.0%
AACAAATCAGACACTAATGA+TGG - chr2_3:3806190-3806209 Msa0272260:CDS 30.0%
ATTGACTGAGAAGATGAAAA+AGG - chr2_3:3806285-3806304 Msa0272260:CDS 30.0%
TTGACTGAGAAGATGAAAAA+GGG - chr2_3:3806286-3806305 Msa0272260:CDS 30.0%
AAAGATACCTTAGTATCAAG+GGG + chr2_3:3806316-3806335 None:intergenic 30.0%
GAAAGATACCTTAGTATCAA+GGG + chr2_3:3806317-3806336 None:intergenic 30.0%
AGAAAGATACCTTAGTATCA+AGG + chr2_3:3806318-3806337 None:intergenic 30.0%
TTTACAAACACCAAAACTCA+GGG + chr2_3:3806357-3806376 None:intergenic 30.0%
TGGTGTTTGTAAAGCTTATA+TGG - chr2_3:3806364-3806383 Msa0272260:intron 30.0%
GGTGTTTGTAAAGCTTATAT+GGG - chr2_3:3806365-3806384 Msa0272260:intron 30.0%
GTGTTTGTAAAGCTTATATG+GGG - chr2_3:3806366-3806385 Msa0272260:intron 30.0%
GACTTAAAAACTGTGTTAGA+TGG - chr2_3:3806441-3806460 Msa0272260:intron 30.0%
AAACTGTGTTAGATGGTTTA+AGG - chr2_3:3806448-3806467 Msa0272260:intron 30.0%
!!! AGTATCAACGCATTTTTTCT+CGG + chr2_3:3806531-3806550 None:intergenic 30.0%
! GCCTTTACTTATTTGTGTTT+TGG - chr2_3:3806556-3806575 Msa0272260:intron 30.0%
CCCAAAACACAAATAAGTAA+AGG + chr2_3:3806560-3806579 None:intergenic 30.0%
!!! TGGTTTTAAGCATTGTTGTA+TGG - chr2_3:3806586-3806605 Msa0272260:intron 30.0%
! TTTTTAACCGTTGTATGCAT+AGG + chr2_3:3806763-3806782 None:intergenic 30.0%
CTTTCGACTCAAATATAATC+AGG - chr2_3:3806788-3806807 Msa0272260:CDS 30.0%
ACTCAAATATAATCAGGGAA+TGG - chr2_3:3806794-3806813 Msa0272260:CDS 30.0%
CTCAAATATAATCAGGGAAT+GGG - chr2_3:3806795-3806814 Msa0272260:CDS 30.0%
!! TGTTTGTTGTTGTTAGTCTT+CGG - chr2_3:3806998-3807017 Msa0272260:CDS 30.0%
!! TGCAATTTTCTCTTCTAAAG+AGG + chr2_3:3807149-3807168 None:intergenic 30.0%
ATGTTGTGATTGGATATTTC+TGG - chr2_3:3807211-3807230 Msa0272260:intron 30.0%
! TGATGCTTTCTTTTGCTTTA+CGG - chr2_3:3807234-3807253 Msa0272260:intron 30.0%
ATTATACAAGTCCACAATGT+TGG - chr2_3:3807435-3807454 Msa0272260:intron 30.0%
ATCAACAATTACGAAAGGAA+GGG + chr2_3:3807497-3807516 None:intergenic 30.0%
AATCAACAATTACGAAAGGA+AGG + chr2_3:3807498-3807517 None:intergenic 30.0%
!!! TCGTAATTGTTGATTTTTGC+AGG - chr2_3:3807503-3807522 Msa0272260:intron 30.0%
!!! TAAACATTTTGAGTATCGAC+AGG + chr2_3:3807818-3807837 None:intergenic 30.0%
GAAATCGAAAATGAGTACAT+TGG - chr2_3:3807907-3807926 Msa0272260:CDS 30.0%
AAATATCAGCAAAATGCACA+AGG + chr2_3:3807990-3808009 None:intergenic 30.0%
! GCAAAATACAAAGAGTATAC+AGG - chr2_3:3808223-3808242 Msa0272260:CDS 30.0%
GTCAGAAATATAATGAACAC+GGG + chr2_3:3808349-3808368 None:intergenic 30.0%
!! TACCTTTAACTTCTCCTTTT+CGG + chr2_3:3808438-3808457 None:intergenic 30.0%
! AACAACCACAATTGGTAATA+AGG + chr2_3:3808629-3808648 None:intergenic 30.0%
TCTCCCCTGTTAAAAATATT+TGG + chr2_3:3808721-3808740 None:intergenic 30.0%
AAAATTGCACAACACTATTC+TGG - chr2_3:3808959-3808978 Msa0272260:intron 30.0%
ATGAAACTTATTCAAGATGG+TGG + chr2_3:3809267-3809286 None:intergenic 30.0%
! ATTTTTATGCATAACCAGTC+TGG + chr2_3:3809501-3809520 None:intergenic 30.0%
! GACTGGTTATGCATAAAAAT+AGG - chr2_3:3809501-3809520 Msa0272260:CDS 30.0%
TTAAAGTTGTGTAGCCATTT+CGG - chr2_3:3809644-3809663 Msa0272260:intron 30.0%
AAAACTGTAAATAGCCGAAA+TGG + chr2_3:3809661-3809680 None:intergenic 30.0%
! TCGGCTATTTACAGTTTTTA+AGG - chr2_3:3809663-3809682 Msa0272260:intron 30.0%
! CGGCTATTTACAGTTTTTAA+GGG - chr2_3:3809664-3809683 Msa0272260:intron 30.0%
AGGCATAGTTTATCTAGTAA+AGG + chr2_3:3810115-3810134 None:intergenic 30.0%
TTACTAGATAAACTATGCCT+TGG - chr2_3:3810115-3810134 Msa0272260:intron 30.0%
ACAAAGGTTTCATGGTTTAT+TGG - chr2_3:3810145-3810164 Msa0272260:intron 30.0%
CAAAGGTTTCATGGTTTATT+GGG - chr2_3:3810146-3810165 Msa0272260:intron 30.0%
AAAGGTTTCATGGTTTATTG+GGG - chr2_3:3810147-3810166 Msa0272260:intron 30.0%
! TAGGTTTGCATTTTTGCTTA+TGG - chr2_3:3810170-3810189 Msa0272260:CDS 30.0%
! ATTTTTGCTTATGGACAAAC+AGG - chr2_3:3810179-3810198 Msa0272260:CDS 30.0%
TTTGCATTAGGTACAAATGT+TGG - chr2_3:3810369-3810388 Msa0272260:intron 30.0%
TCGTGTGAATATTTATTTGC+AGG - chr2_3:3810407-3810426 Msa0272260:intron 30.0%
AAATATACAACGAGACCATA+AGG - chr2_3:3810442-3810461 Msa0272260:intron 30.0%
AATATACAACGAGACCATAA+GGG - chr2_3:3810443-3810462 Msa0272260:intron 30.0%
AATATTATACACGATGCCAA+TGG - chr2_3:3810504-3810523 Msa0272260:intron 30.0%
TGGAAAAAACACATATGTTC+CGG - chr2_3:3810524-3810543 Msa0272260:intron 30.0%
ATTGTGTTGTGAAGTTATGT+TGG - chr2_3:3810656-3810675 Msa0272260:intron 30.0%
TTGTGTTGTGAAGTTATGTT+GGG - chr2_3:3810657-3810676 Msa0272260:intron 30.0%
! AATGCGTCTGCTAATATTTT+TGG - chr2_3:3810716-3810735 Msa0272260:intron 30.0%
TGAAACAATTATACAGTACC+AGG + chr2_3:3810794-3810813 None:intergenic 30.0%
! GTGAACAATTGTGTGTTTTT+CGG + chr2_3:3810949-3810968 None:intergenic 30.0%
CTTGCATCTTCTTATTAACA+AGG + chr2_3:3810990-3811009 None:intergenic 30.0%
! GTGAACAATTGTGTGTTTTT+CGG + chr2_3:3810949-3810968 None:intergenic 30.0%
! AATGCTCTTTACATTTTTCC+AGG - chr2_3:3811262-3811281 Msa0272260:intron 30.0%
AAACCAGACAAAAGTAAATC+AGG + chr2_3:3811420-3811439 None:intergenic 30.0%
AAAAATGACATCACTCAAAC+AGG + chr2_3:3811668-3811687 None:intergenic 30.0%
ATATTAAAGCTTAGCAAACC+TGG + chr2_3:3811750-3811769 None:intergenic 30.0%
TATAATCACTCAAATGCCAA+AGG + chr2_3:3812009-3812028 None:intergenic 30.0%
GAGTGAACCAAACTTATTAT+TGG - chr2_3:3812038-3812057 Msa0272260:intron 30.0%
AGAGTAAATAGTTGTGAGAT+TGG - chr2_3:3812237-3812256 Msa0272260:CDS 30.0%
TATCACAGCTAAATGATACA+GGG + chr2_3:3812507-3812526 None:intergenic 30.0%
ATATCACAGCTAAATGATAC+AGG + chr2_3:3812508-3812527 None:intergenic 30.0%
TTAATTCTTGCAACTTCACA+AGG - chr2_3:3812596-3812615 Msa0272260:five_prime_UTR 30.0%
AACAGTTGTTAACAACAACA+TGG - chr2_3:3812637-3812656 Msa0272260:five_prime_UTR 30.0%
TTGTTAACAACAACATGGTT+TGG - chr2_3:3812642-3812661 Msa0272260:five_prime_UTR 30.0%
TGTTAACAACAACATGGTTT+GGG - chr2_3:3812643-3812662 Msa0272260:five_prime_UTR 30.0%
GAACTTAATGCATGCATTAT+TGG + chr2_3:3812696-3812715 None:intergenic 30.0%
TAGGAATCGATTATGGGAAA+TGG + chr2_3:3805848-3805867 None:intergenic 35.0%
TGTGAAAGAGAGAGAATGAA+GGG + chr2_3:3805948-3805967 None:intergenic 35.0%
ATGTGAAAGAGAGAGAATGA+AGG + chr2_3:3805949-3805968 None:intergenic 35.0%
CTGAAGAAAATAAGCGTAGA+AGG - chr2_3:3806107-3806126 Msa0272260:three_prime_UTR 35.0%
GAAAATAAGCGTAGAAGGAT+TGG - chr2_3:3806112-3806131 Msa0272260:three_prime_UTR 35.0%
!! AGTGTCTGATTTGTTGTTGA+GGG + chr2_3:3806185-3806204 None:intergenic 35.0%
!! TAGTGTCTGATTTGTTGTTG+AGG + chr2_3:3806186-3806205 None:intergenic 35.0%
TTGGTGAATTCAATGATGCT+CGG + chr2_3:3806247-3806266 None:intergenic 35.0%
CATCATTGAATTCACCAAAG+AGG - chr2_3:3806249-3806268 Msa0272260:CDS 35.0%
TAAAGCTTCTACTTCCTCTT+TGG + chr2_3:3806266-3806285 None:intergenic 35.0%
TGACTGAGAAGATGAAAAAG+GGG - chr2_3:3806287-3806306 Msa0272260:CDS 35.0%
CTTTACAAACACCAAAACTC+AGG + chr2_3:3806358-3806377 None:intergenic 35.0%
! TGGTTTAAGGTAGTTGAAGA+AGG - chr2_3:3806461-3806480 Msa0272260:intron 35.0%
! GGTTTAAGGTAGTTGAAGAA+GGG - chr2_3:3806462-3806481 Msa0272260:intron 35.0%
! GAGAAAAAATGCGTTGATAC+TGG - chr2_3:3806530-3806549 Msa0272260:intron 35.0%
!!! ATTTGTGTTTTGGGCATTGA+TGG - chr2_3:3806566-3806585 Msa0272260:intron 35.0%
! AAGCATTGTTGTATGGCATT+TGG - chr2_3:3806593-3806612 Msa0272260:intron 35.0%
! TTTGGTAGTAACAGTGAAGA+AGG - chr2_3:3806611-3806630 Msa0272260:intron 35.0%
AATCAAGCATTCCGTTCATT+TGG + chr2_3:3806728-3806747 None:intergenic 35.0%
ATTCGAACCTATGCATACAA+CGG - chr2_3:3806753-3806772 Msa0272260:CDS 35.0%
TCATGTTCATCTCATTCTCT+GGG + chr2_3:3807078-3807097 None:intergenic 35.0%
TTCATGTTCATCTCATTCTC+TGG + chr2_3:3807079-3807098 None:intergenic 35.0%
GAAGATAGCAGAATTGAATG+AGG - chr2_3:3807096-3807115 Msa0272260:intron 35.0%
ATGAGGCTATATCGAATTTG+AGG - chr2_3:3807113-3807132 Msa0272260:CDS 35.0%
ATCCAATCACAACATTGTTG+TGG + chr2_3:3807206-3807225 None:intergenic 35.0%
! AGGAAGTGATGGAATGTTAT+AGG - chr2_3:3807283-3807302 Msa0272260:intron 35.0%
GGTATCAAAAACCAACATTG+TGG + chr2_3:3807449-3807468 None:intergenic 35.0%
!!! TGTTGGTTTTTGATACCAGT+AGG - chr2_3:3807452-3807471 Msa0272260:intron 35.0%
AAATAATTGAGGCAACCTAC+TGG + chr2_3:3807470-3807489 None:intergenic 35.0%
TCAACAATTACGAAAGGAAG+GGG + chr2_3:3807496-3807515 None:intergenic 35.0%
!!! TTTGTTTTAGTTCATCTCGG+AGG + chr2_3:3808147-3808166 None:intergenic 35.0%
AGGGAAATCAAGTGAACAAT+TGG - chr2_3:3808243-3808262 Msa0272260:CDS 35.0%
GGGAAATCAAGTGAACAATT+GGG - chr2_3:3808244-3808263 Msa0272260:CDS 35.0%
TTTCTGACTTTACTTGTAGG+AGG - chr2_3:3808361-3808380 Msa0272260:intron 35.0%
TTGGACCTTATTACCAATTG+TGG - chr2_3:3808621-3808640 Msa0272260:intron 35.0%
AAGCAAAGAACAACCACAAT+TGG + chr2_3:3808637-3808656 None:intergenic 35.0%
GGGGAGATGATTAATATGAA+TGG - chr2_3:3808734-3808753 Msa0272260:intron 35.0%
TGTTTCCGAAAAGGACAAAT+CGG + chr2_3:3808841-3808860 None:intergenic 35.0%
GAAGACCAGAAAAGAACTAT+AGG - chr2_3:3808873-3808892 Msa0272260:intron 35.0%
! GTTGACCTATAGTTCTTTTC+TGG + chr2_3:3808881-3808900 None:intergenic 35.0%
AAAGAGCTCCAAGTAATTGA+AGG - chr2_3:3808921-3808940 Msa0272260:intron 35.0%
ATGTCTCTCCTTCAATTACT+TGG + chr2_3:3808932-3808951 None:intergenic 35.0%
CACAACACTATTCTGGTAAA+TGG - chr2_3:3808966-3808985 Msa0272260:intron 35.0%
TTGTACTAGCTGAGAAATCT+CGG + chr2_3:3809420-3809439 None:intergenic 35.0%
GAATGTTACAACTTGCAAGA+TGG - chr2_3:3809553-3809572 Msa0272260:CDS 35.0%
GATGGAAAAACACTTACTCT+TGG - chr2_3:3809571-3809590 Msa0272260:CDS 35.0%
AAAACACTTACTCTTGGCTT+TGG - chr2_3:3809577-3809596 Msa0272260:CDS 35.0%
! CTGGTAGATTCTGATTGTTT+TGG - chr2_3:3809742-3809761 Msa0272260:intron 35.0%
!! GTTCTCTAAAATGCATAGTC+TGG - chr2_3:3809858-3809877 Msa0272260:intron 35.0%
! CATAGTCTGGCACATTATTT+TGG - chr2_3:3809871-3809890 Msa0272260:intron 35.0%
!!! GGCACATTATTTTGGTCAAA+TGG - chr2_3:3809879-3809898 Msa0272260:intron 35.0%
! TGGTCAAATGGAATTTTGTC+TGG - chr2_3:3809891-3809910 Msa0272260:intron 35.0%
TAGATAAACTATGCCTTGGT+TGG - chr2_3:3810119-3810138 Msa0272260:intron 35.0%
GGAAAAACCTATACGATGAT+TGG - chr2_3:3810206-3810225 Msa0272260:CDS 35.0%
AATATCTGTTCAAGTGAACG+TGG + chr2_3:3810266-3810285 None:intergenic 35.0%
TGGTGATAACAAATCCCTTA+TGG + chr2_3:3810460-3810479 None:intergenic 35.0%
TTATCACCAACAGAAAATCC+TGG - chr2_3:3810471-3810490 Msa0272260:intron 35.0%
! TTCTTTCCAGGATTTTCTGT+TGG + chr2_3:3810480-3810499 None:intergenic 35.0%
TGTGTTGTGAAGTTATGTTG+GGG - chr2_3:3810658-3810677 Msa0272260:intron 35.0%
ATTGTAGCTATCAAGTTTCC+TGG - chr2_3:3810773-3810792 Msa0272260:CDS 35.0%
GCATCTTCTTATTAACAAGG+AGG + chr2_3:3810987-3811006 None:intergenic 35.0%
CAATGTGATTGTGTTCTTTC+TGG - chr2_3:3811220-3811239 Msa0272260:intron 35.0%
! TTACATTTTTCCAGGTCAGT+AGG - chr2_3:3811270-3811289 Msa0272260:intron 35.0%
!! TCTCCTGATTTACTTTTGTC+TGG - chr2_3:3811414-3811433 Msa0272260:intron 35.0%
! TCAGTTTAGAATTCCTGAAG+GGG + chr2_3:3811717-3811736 None:intergenic 35.0%
! GTCAGTTTAGAATTCCTGAA+GGG + chr2_3:3811718-3811737 None:intergenic 35.0%
! TGTCAGTTTAGAATTCCTGA+AGG + chr2_3:3811719-3811738 None:intergenic 35.0%
TTTACACATGAGAGAACATG+AGG - chr2_3:3811918-3811937 Msa0272260:CDS 35.0%
TTACACATGAGAGAACATGA+GGG - chr2_3:3811919-3811938 Msa0272260:CDS 35.0%
TCTGATTCTCGTTTAAGCTA+TGG - chr2_3:3812291-3812310 Msa0272260:CDS 35.0%
! GTGTTGTGTTGTTCTAAGTA+TGG - chr2_3:3812400-3812419 Msa0272260:intron 35.0%
TTAGAGAATTGAGCTTGTAG+TGG - chr2_3:3812444-3812463 Msa0272260:intron 35.0%
!! TTGGAGTGTTGTGTTGTGTT+GGG + chr2_3:3805804-3805823 None:intergenic 40.0%
!! TTTGGAGTGTTGTGTTGTGT+TGG + chr2_3:3805805-3805824 None:intergenic 40.0%
GTTGGGAAAATGTTAGGGTT+TGG + chr2_3:3805823-3805842 None:intergenic 40.0%
GAATCGATTATGGGAAATGG+CGG + chr2_3:3805845-3805864 None:intergenic 40.0%
! ACATGAAGTGCTTCGTAGAA+TGG + chr2_3:3805878-3805897 None:intergenic 40.0%
GTGAAAGAGAGAGAATGAAG+GGG + chr2_3:3805947-3805966 None:intergenic 40.0%
AATAAGCGTAGAAGGATTGG+TGG - chr2_3:3806115-3806134 Msa0272260:three_prime_UTR 40.0%
!! AAGGATTGGTGGTGAAAGAA+TGG - chr2_3:3806126-3806145 Msa0272260:three_prime_UTR 40.0%
! TTGTTGTTGAGGGAACCTAA+TGG + chr2_3:3806175-3806194 None:intergenic 40.0%
! TTTACTGTCTCCCTGAGTTT+TGG - chr2_3:3806344-3806363 Msa0272260:intron 40.0%
GCAGAAAAAAATGGAGCAGA+TGG - chr2_3:3806403-3806422 Msa0272260:intron 40.0%
GAAAAAAATGGAGCAGATGG+TGG - chr2_3:3806406-3806425 Msa0272260:intron 40.0%
TGCCACAACAATGTTGTGAT+TGG - chr2_3:3807201-3807220 Msa0272260:intron 40.0%
AGCCAGAAACACGATAAATG+AGG + chr2_3:3807260-3807279 None:intergenic 40.0%
!! TTATCGTGTTTCTGGCTACT+AGG - chr2_3:3807263-3807282 Msa0272260:intron 40.0%
AACAATTACGAAAGGAAGGG+GGG + chr2_3:3807494-3807513 None:intergenic 40.0%
CAACAATTACGAAAGGAAGG+GGG + chr2_3:3807495-3807514 None:intergenic 40.0%
!!! CTCTGTTTCCAGTCGTTTTT+GGG + chr2_3:3807631-3807650 None:intergenic 40.0%
!! TCTCTGTTTCCAGTCGTTTT+TGG + chr2_3:3807632-3807651 None:intergenic 40.0%
ATTACGTGAAGTTCCTGTTG+TGG - chr2_3:3807840-3807859 Msa0272260:intron 40.0%
AATTCCAACTTGTCCACAAC+AGG + chr2_3:3807856-3807875 None:intergenic 40.0%
ATCTTAGGCTTCACAAGAAG+AGG - chr2_3:3808081-3808100 Msa0272260:intron 40.0%
TTCACAAGAAGAGGCTACAA+AGG - chr2_3:3808090-3808109 Msa0272260:intron 40.0%
AAGCTTGTACTTGTCCCAAT+TGG + chr2_3:3808189-3808208 None:intergenic 40.0%
! GGACAAGTACAAGCTTTAAC+TGG - chr2_3:3808193-3808212 Msa0272260:CDS 40.0%
! AGTACAAGCTTTAACTGGAG+AGG - chr2_3:3808198-3808217 Msa0272260:CDS 40.0%
AGCTAAAACAAATGCTCTCG+AGG - chr2_3:3808276-3808295 Msa0272260:intron 40.0%
! AGGAGGTATGTACTTCACAA+AGG - chr2_3:3808378-3808397 Msa0272260:intron 40.0%
TGCCGAAAAGGAGAAGTTAA+AGG - chr2_3:3808433-3808452 Msa0272260:intron 40.0%
! GTCCTTTTCGGAAACACAAA+CGG - chr2_3:3808845-3808864 Msa0272260:intron 40.0%
! CAAGAGCTTCTGTTGATGAA+GGG + chr2_3:3809177-3809196 None:intergenic 40.0%
ATTCACTATAAGCACCAGAC+TGG - chr2_3:3809484-3809503 Msa0272260:CDS 40.0%
! ACCATTACTCTGTTGTTTGC+TGG - chr2_3:3809773-3809792 Msa0272260:intron 40.0%
ACCAGCAAACAACAGAGTAA+TGG + chr2_3:3809777-3809796 None:intergenic 40.0%
TCCATTAACAACAGACGACA+AGG + chr2_3:3809947-3809966 None:intergenic 40.0%
GTTTCATGGTTTATTGGGGT+AGG - chr2_3:3810151-3810170 Msa0272260:intron 40.0%
AAACCTATACGATGATTGGC+AGG - chr2_3:3810210-3810229 Msa0272260:CDS 40.0%
! AGTCAGTCTCTGAAAGATCA+AGG - chr2_3:3810293-3810312 Msa0272260:CDS 40.0%
! GTCAGTCTCTGAAAGATCAA+GGG - chr2_3:3810294-3810313 Msa0272260:CDS 40.0%
GCATTAGGTACAAATGTTGG+TGG - chr2_3:3810372-3810391 Msa0272260:intron 40.0%
CTGACTATTGTGGATGTTTG+CGG - chr2_3:3810549-3810568 Msa0272260:intron 40.0%
!!! TTGTGCAGCCTGTTTTAGAA+GGG + chr2_3:3810592-3810611 None:intergenic 40.0%
!! TTTGTGCAGCCTGTTTTAGA+AGG + chr2_3:3810593-3810612 None:intergenic 40.0%
GTCTTTACTCTGCGAATTAG+TGG - chr2_3:3811333-3811352 Msa0272260:intron 40.0%
! GCGAATTAGTGGTGTTAATG+AGG - chr2_3:3811344-3811363 Msa0272260:intron 40.0%
TTTGTAGAACACTGAACAGC+AGG - chr2_3:3811437-3811456 Msa0272260:intron 40.0%
CTAAACCTGATAGATCTTGC+TGG - chr2_3:3811471-3811490 Msa0272260:intron 40.0%
TAGATCTTGCTGGAAGTGAA+AGG - chr2_3:3811481-3811500 Msa0272260:intron 40.0%
ACACCTTAGTTTCATTCAGG+CGG + chr2_3:3811533-3811552 None:intergenic 40.0%
AGGACACCTTAGTTTCATTC+AGG + chr2_3:3811536-3811555 None:intergenic 40.0%
GTTTGCCATATATGTCTGTC+AGG - chr2_3:3811624-3811643 Msa0272260:intron 40.0%
TATCGCCTGACAGACATATA+TGG + chr2_3:3811632-3811651 None:intergenic 40.0%
!!! GAGTGATGTCATTTTTGCCT+TGG - chr2_3:3811672-3811691 Msa0272260:intron 40.0%
! TTTTGCCTTGGCAAAGAAAG+AGG - chr2_3:3811684-3811703 Msa0272260:intron 40.0%
ATGATCCTCTTTCTTTGCCA+AGG + chr2_3:3811692-3811711 None:intergenic 40.0%
TACACATGAGAGAACATGAG+GGG - chr2_3:3811920-3811939 Msa0272260:CDS 40.0%
CTCACAACTATTTACTCTCG+CGG + chr2_3:3812235-3812254 None:intergenic 40.0%
GTTGTGAGATTGGTATTCCT+CGG - chr2_3:3812247-3812266 Msa0272260:CDS 40.0%
GTTTAAGCTATGGCTAAGCA+AGG - chr2_3:3812301-3812320 Msa0272260:CDS 40.0%
! TGCAACTTCACAAGGTTGAT+TGG - chr2_3:3812604-3812623 Msa0272260:five_prime_UTR 40.0%
! ACTTCACAAGGTTGATTGGA+TGG - chr2_3:3812608-3812627 Msa0272260:five_prime_UTR 40.0%
GTGTTGTGTTGGGAAGAAGA+AGG + chr2_3:3805794-3805813 None:intergenic 45.0%
TGGCGGTTGGGAAAATGTTA+GGG + chr2_3:3805828-3805847 None:intergenic 45.0%
ATGGCGGTTGGGAAAATGTT+AGG + chr2_3:3805829-3805848 None:intergenic 45.0%
GATTATGGGAAATGGCGGTT+GGG + chr2_3:3805840-3805859 None:intergenic 45.0%
TGTCTTCCCGGAATCAGAAT+CGG - chr2_3:3805895-3805914 Msa0272260:three_prime_UTR 45.0%
AATGAAGGGGATTCGTACGT+TGG + chr2_3:3805934-3805953 None:intergenic 45.0%
TAGATGCAGAAAAAAGGGGG+TGG - chr2_3:3806082-3806101 Msa0272260:three_prime_UTR 45.0%
GGTGAAAGAATGGTCGTACA+AGG - chr2_3:3806136-3806155 Msa0272260:exon 45.0%
AGAATGGTCGTACAAGGTAG+AGG - chr2_3:3806142-3806161 Msa0272260:exon 45.0%
! TCAGACACTAATGATGGTGC+CGG - chr2_3:3806196-3806215 Msa0272260:CDS 45.0%
ATCCATCTAGCCAACCTAGT+GGG - chr2_3:3806967-3806986 Msa0272260:CDS 45.0%
GGCCTCATTTATCGTGTTTC+TGG - chr2_3:3807255-3807274 Msa0272260:intron 45.0%
! TTCTGGCTACTAGGAAGTGA+TGG - chr2_3:3807272-3807291 Msa0272260:intron 45.0%
CATCTGCTCAGCTTCATTTC+TGG + chr2_3:3807322-3807341 None:intergenic 45.0%
ATGAGAAATCAGCTGCTGTG+CGG - chr2_3:3807379-3807398 Msa0272260:intron 45.0%
GGAAGGGGGGAAAATAATTG+AGG + chr2_3:3807481-3807500 None:intergenic 45.0%
GCAGTACAATAGTAGCCTTC+AGG - chr2_3:3807581-3807600 Msa0272260:intron 45.0%
GAGAACCTTAGCAATGTCAG+AGG - chr2_3:3807666-3807685 Msa0272260:intron 45.0%
AGTTCCTGTTGTGGACAAGT+TGG - chr2_3:3807849-3807868 Msa0272260:CDS 45.0%
!!! GATGGCCGATTTGTCCTTTT+CGG - chr2_3:3808833-3808852 Msa0272260:intron 45.0%
CACCGTTTGTGTTTCCGAAA+AGG + chr2_3:3808850-3808869 None:intergenic 45.0%
! CCAAGAGCTTCTGTTGATGA+AGG + chr2_3:3809178-3809197 None:intergenic 45.0%
CCTTCATCAACAGAAGCTCT+TGG - chr2_3:3809175-3809194 Msa0272260:intron 45.0%
!! TCTTGGTCGAGGTGTTGAAT+TGG - chr2_3:3809192-3809211 Msa0272260:intron 45.0%
TAGTACAAAGCGCGCTTGAT+GGG - chr2_3:3809432-3809451 Msa0272260:intron 45.0%
GGAGACTTGCACAATTCTGT+TGG - chr2_3:3809598-3809617 Msa0272260:CDS 45.0%
GCCTTGTCGTCTGTTGTTAA+TGG - chr2_3:3809943-3809962 Msa0272260:intron 45.0%
!! ATTTCAGTGCTGCTTCGTGA+AGG + chr2_3:3810016-3810035 None:intergenic 45.0%
! TTCACGAAGCAGCACTGAAA+TGG - chr2_3:3810015-3810034 Msa0272260:CDS 45.0%
AAACCTTTGTCAGCCAACCA+AGG + chr2_3:3810135-3810154 None:intergenic 45.0%
GTTGGCTGACAAAGGTTTCA+TGG - chr2_3:3810137-3810156 Msa0272260:intron 45.0%
GCTTATGGACAAACAGGTTC+TGG - chr2_3:3810185-3810204 Msa0272260:CDS 45.0%
CTTTCAGAGACTGACTAACG+AGG + chr2_3:3810289-3810308 None:intergenic 45.0%
! AGTCTCTGAAAGATCAAGGG+TGG - chr2_3:3810297-3810316 Msa0272260:CDS 45.0%
ACATCCACAATAGTCAGGTC+CGG + chr2_3:3810546-3810565 None:intergenic 45.0%
CGCAAACATCCACAATAGTC+AGG + chr2_3:3810551-3810570 None:intergenic 45.0%
!! GATTTCCGCCCTTCTAAAAC+AGG - chr2_3:3810581-3810600 Msa0272260:intron 45.0%
TAAAACAGGCTGCACAAAGC+AGG - chr2_3:3810595-3810614 Msa0272260:intron 45.0%
CACTGTGGCACATATTTGTC+TGG + chr2_3:3810692-3810711 None:intergenic 45.0%
AACACTGAACAGCAGGTTCA+AGG - chr2_3:3811444-3811463 Msa0272260:intron 45.0%
CACTTCCAGCAAGATCTATC+AGG + chr2_3:3811479-3811498 None:intergenic 45.0%
AGTGAAAGGCTGTCGAAAAG+TGG - chr2_3:3811495-3811514 Msa0272260:intron 45.0%
TGTCGAAAAGTGGAGCAACT+GGG - chr2_3:3811505-3811524 Msa0272260:intron 45.0%
TAAACTGACAACCCTTCTCC+AGG - chr2_3:3811729-3811748 Msa0272260:intron 45.0%
AGCTTAGCAAACCTGGAGAA+GGG + chr2_3:3811743-3811762 None:intergenic 45.0%
AAGCTTAGCAAACCTGGAGA+AGG + chr2_3:3811744-3811763 None:intergenic 45.0%
ATGTGAGTGCAGAGAACTTG+AGG - chr2_3:3811830-3811849 Msa0272260:intron 45.0%
TTAGAATCTCCGCCAAGACA+TGG + chr2_3:3812141-3812160 None:intergenic 45.0%
ACGAGAATCAGAAGCCTTCA+TGG + chr2_3:3812283-3812302 None:intergenic 45.0%
AGCAAGGTCTGCTAGCAAAA+TGG - chr2_3:3812317-3812336 Msa0272260:CDS 45.0%
GAATTGAGCTTGTAGTGGCT+TGG - chr2_3:3812449-3812468 Msa0272260:intron 45.0%
CGATTATGGGAAATGGCGGT+TGG + chr2_3:3805841-3805860 None:intergenic 50.0%
! CGAAGCACTTCATGTCTTCC+CGG - chr2_3:3805883-3805902 Msa0272260:three_prime_UTR 50.0%
GTCTTCCCGGAATCAGAATC+GGG - chr2_3:3805896-3805915 Msa0272260:three_prime_UTR 50.0%
! TTGGTGCCCGATTCTGATTC+CGG + chr2_3:3805905-3805924 None:intergenic 50.0%
AAGGGGATTCGTACGTTGGA+GGG + chr2_3:3805930-3805949 None:intergenic 50.0%
TGGTCGTACAAGGTAGAGGT+AGG - chr2_3:3806146-3806165 Msa0272260:CDS 50.0%
GGTCGTACAAGGTAGAGGTA+GGG - chr2_3:3806147-3806166 Msa0272260:CDS 50.0%
GGGGAATCCCCTTGATACTA+AGG - chr2_3:3806306-3806325 Msa0272260:CDS 50.0%
GATCCATCTAGCCAACCTAG+TGG - chr2_3:3806966-3806985 Msa0272260:CDS 50.0%
CAAACAAGCCTTCTCCCACT+AGG + chr2_3:3806984-3807003 None:intergenic 50.0%
CTGCGTCAAGATTTGCCTGA+AGG + chr2_3:3807599-3807618 None:intergenic 50.0%
AAATCTTGACGCAGCCAGTG+CGG - chr2_3:3807605-3807624 Msa0272260:intron 50.0%
TGTGGCCTCTGACATTGCTA+AGG + chr2_3:3807674-3807693 None:intergenic 50.0%
CAATGTCAGAGGCCACAACA+AGG - chr2_3:3807677-3807696 Msa0272260:intron 50.0%
! GCTCTTGCAATGCCTTGTTG+TGG + chr2_3:3807692-3807711 None:intergenic 50.0%
!! CAAGGCATTGCAAGAGCAGT+TGG - chr2_3:3807695-3807714 Msa0272260:intron 50.0%
CTTGTCCCAATTGGCGATCA+CGG + chr2_3:3808180-3808199 None:intergenic 50.0%
GCAGCAGTTGAATGCCGAAA+AGG - chr2_3:3808421-3808440 Msa0272260:intron 50.0%
AGGTCAACTACGAGAGAGAC+TGG - chr2_3:3808893-3808912 Msa0272260:intron 50.0%
GAAACTACCATGTCTGCTGC+AGG + chr2_3:3809151-3809170 None:intergenic 50.0%
TCAACAGAAGCTCTTGGTCG+AGG - chr2_3:3809181-3809200 Msa0272260:intron 50.0%
! GGTGTTGAATTGGCACAGAG+CGG - chr2_3:3809202-3809221 Msa0272260:intron 50.0%
TAATCAGGAGGCTTCACAGC+AGG - chr2_3:3809385-3809404 Msa0272260:intron 50.0%
CTAGTACAAAGCGCGCTTGA+TGG - chr2_3:3809431-3809450 Msa0272260:intron 50.0%
! ACGACAAGGCATCAAGCACA+AGG + chr2_3:3809933-3809952 None:intergenic 50.0%
! ATGCCTTGGTTGGCTGACAA+AGG - chr2_3:3810129-3810148 Msa0272260:intron 50.0%
AGGCCTGCCAATCATCGTAT+AGG + chr2_3:3810216-3810235 None:intergenic 50.0%
TATACGATGATTGGCAGGCC+TGG - chr2_3:3810215-3810234 Msa0272260:CDS 50.0%
TATCAAGCCTTTGAGCTCCG+GGG + chr2_3:3810243-3810262 None:intergenic 50.0%
GTATCAAGCCTTTGAGCTCC+GGG + chr2_3:3810244-3810263 None:intergenic 50.0%
GGTATCAAGCCTTTGAGCTC+CGG + chr2_3:3810245-3810264 None:intergenic 50.0%
! AGGGTGGAAGTACACAATGC+AGG - chr2_3:3810313-3810332 Msa0272260:CDS 50.0%
TGTTCCGGACCTGACTATTG+TGG - chr2_3:3810539-3810558 Msa0272260:intron 50.0%
!!! TGCAGCCTGTTTTAGAAGGG+CGG + chr2_3:3810589-3810608 None:intergenic 50.0%
GCAGACGCATTATTGCACTG+TGG + chr2_3:3810707-3810726 None:intergenic 50.0%
CTGTGTTCTTCCTACTGACC+TGG + chr2_3:3811283-3811302 None:intergenic 50.0%
CTGTCGAAAAGTGGAGCAAC+TGG - chr2_3:3811504-3811523 Msa0272260:intron 50.0%
GTCGAAAAGTGGAGCAACTG+GGG - chr2_3:3811506-3811525 Msa0272260:intron 50.0%
GGACCGCCTGAATGAAACTA+AGG - chr2_3:3811527-3811546 Msa0272260:intron 50.0%
AAGAGGATCATGTCCCCTTC+AGG - chr2_3:3811701-3811720 Msa0272260:intron 50.0%
TTCCTTTGGCAGCCATGTCT+TGG - chr2_3:3812126-3812145 Msa0272260:intron 50.0%
TCTCCAGTCGAAGATGGATC+GGG + chr2_3:3812189-3812208 None:intergenic 50.0%
CTCTCCAGTCGAAGATGGAT+CGG + chr2_3:3812190-3812209 None:intergenic 50.0%
AGTGACTCTCCAGTCGAAGA+TGG + chr2_3:3812195-3812214 None:intergenic 50.0%
CAGAAGCCTTCATGGATGTC+TGG + chr2_3:3812275-3812294 None:intergenic 50.0%
GGCTATCACTATAGCCTCAG+TGG - chr2_3:3812470-3812489 Msa0272260:intron 50.0%
GGGCATCAATAACACCACTG+AGG + chr2_3:3812487-3812506 None:intergenic 50.0%
TGGTGCCCGATTCTGATTCC+GGG + chr2_3:3805904-3805923 None:intergenic 55.0%
ATTCGTACGTTGGAGGGGCT+TGG + chr2_3:3805924-3805943 None:intergenic 55.0%
AGGGGATTCGTACGTTGGAG+GGG + chr2_3:3805929-3805948 None:intergenic 55.0%
GAAGGGGATTCGTACGTTGG+AGG + chr2_3:3805931-3805950 None:intergenic 55.0%
GGTAGAGGTAGGGCTCCATT+AGG - chr2_3:3806157-3806176 Msa0272260:CDS 55.0%
!! ACTAATGATGGTGCCGGTGC+CGG - chr2_3:3806202-3806221 Msa0272260:CDS 55.0%
! CTCCCACTAGGTTGGCTAGA+TGG + chr2_3:3806972-3806991 None:intergenic 55.0%
CTAGCCAACCTAGTGGGAGA+AGG - chr2_3:3806973-3806992 Msa0272260:CDS 55.0%
CAAGCCTTCTCCCACTAGGT+TGG + chr2_3:3806980-3806999 None:intergenic 55.0%
AGACGACCGTGATCGCCAAT+TGG - chr2_3:3808171-3808190 Msa0272260:CDS 55.0%
GACGACCGTGATCGCCAATT+GGG - chr2_3:3808172-3808191 Msa0272260:CDS 55.0%
CTGGTAGCAAAGGTCGAACG+CGG + chr2_3:3809120-3809139 None:intergenic 55.0%
CGACCTTTGCTACCAGACGA+TGG - chr2_3:3809124-3809143 Msa0272260:intron 55.0%
GGACCATCGTCTGGTAGCAA+AGG + chr2_3:3809130-3809149 None:intergenic 55.0%
! AAGCGCGCTTGATGGGTACA+AGG - chr2_3:3809439-3809458 Msa0272260:intron 55.0%
ATCAAGCCTTTGAGCTCCGG+GGG + chr2_3:3810242-3810261 None:intergenic 55.0%
CTTTGGCAGCCATGTCTTGG+CGG - chr2_3:3812129-3812148 Msa0272260:intron 55.0%
TCACCCGATCCATCTTCGAC+TGG - chr2_3:3812183-3812202 Msa0272260:CDS 55.0%
CTCAGATCCCTCGGTTGCAC+CGG + chr2_3:3806224-3806243 None:intergenic 60.0%
GATGCTCGGCTCAGATCCCT+CGG + chr2_3:3806233-3806252 None:intergenic 60.0%
GAAATCAGCTGCTGTGCGGC+AGG - chr2_3:3807383-3807402 Msa0272260:intron 60.0%
!!! CAGTCGTTTTTGGGCCGCAC+TGG + chr2_3:3807622-3807641 None:intergenic 60.0%
CAGTGCGGCCCAAAAACGAC+TGG - chr2_3:3807620-3807639 Msa0272260:intron 60.0%
GTCGAACGCGGCAGAACACA+CGG + chr2_3:3809108-3809127 None:intergenic 60.0%
TCTGCTGCAGGACCATCGTC+TGG + chr2_3:3809139-3809158 None:intergenic 60.0%
CGATGGTCCTGCAGCAGACA+TGG - chr2_3:3809141-3809160 Msa0272260:intron 60.0%
TCAAGCCTTTGAGCTCCGGG+GGG + chr2_3:3810241-3810260 None:intergenic 60.0%
CGCCAAGACATGGCTGCCAA+AGG + chr2_3:3812131-3812150 None:intergenic 60.0%
TTCATGGATGTCTGGCGCCG+AGG + chr2_3:3812267-3812286 None:intergenic 60.0%
TCGGCGCCAGACATCCATGA+AGG - chr2_3:3812266-3812285 Msa0272260:CDS 60.0%
! TCCCTCGGTTGCACCGGCAC+CGG + chr2_3:3806218-3806237 None:intergenic 70.0%
!! TGCCGGTGCCGGTGCAACCG+AGG - chr2_3:3806213-3806232 Msa0272260:CDS 75.0%
!! GCCGGTGCCGGTGCAACCGA+GGG - chr2_3:3806214-3806233 Msa0272260:CDS 75.0%
GATTGGCAGGCCTGGCCCCC+CGG - chr2_3:3810223-3810242 Msa0272260:CDS 75.0%
CCTTTGAGCTCCGGGGGGCC+AGG + chr2_3:3810236-3810255 None:intergenic 75.0%
CCTGGCCCCCCGGAGCTCAA+AGG - chr2_3:3810233-3810252 Msa0272260:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 3805738 3812725 3805738 ID=Msa0272260;Name=Msa0272260
chr2_3 mRNA 3805738 3812725 3805738 ID=Msa0272260-mRNA-1;Parent=Msa0272260;Name=Msa0272260-mRNA-1;_AED=0.10;_eAED=0.10;_QI=156|0.93|0.94|1|0.87|0.88|17|408|762
chr2_3 exon 3805738 3806325 3805738 ID=Msa0272260-mRNA-1:exon:1902;Parent=Msa0272260-mRNA-1
chr2_3 exon 3806713 3806817 3806713 ID=Msa0272260-mRNA-1:exon:1901;Parent=Msa0272260-mRNA-1
chr2_3 exon 3806915 3807019 3806915 ID=Msa0272260-mRNA-1:exon:1900;Parent=Msa0272260-mRNA-1
chr2_3 exon 3807098 3807179 3807098 ID=Msa0272260-mRNA-1:exon:1899;Parent=Msa0272260-mRNA-1
chr2_3 exon 3807847 3808034 3807847 ID=Msa0272260-mRNA-1:exon:1898;Parent=Msa0272260-mRNA-1
chr2_3 exon 3808129 3808290 3808129 ID=Msa0272260-mRNA-1:exon:1897;Parent=Msa0272260-mRNA-1
chr2_3 exon 3809003 3809112 3809003 ID=Msa0272260-mRNA-1:exon:1896;Parent=Msa0272260-mRNA-1
chr2_3 exon 3809240 3809375 3809240 ID=Msa0272260-mRNA-1:exon:1895;Parent=Msa0272260-mRNA-1
chr2_3 exon 3809483 3809629 3809483 ID=Msa0272260-mRNA-1:exon:1894;Parent=Msa0272260-mRNA-1
chr2_3 exon 3810009 3810083 3810009 ID=Msa0272260-mRNA-1:exon:1893;Parent=Msa0272260-mRNA-1
chr2_3 exon 3810166 3810375 3810166 ID=Msa0272260-mRNA-1:exon:1892;Parent=Msa0272260-mRNA-1
chr2_3 exon 3810735 3810938 3810735 ID=Msa0272260-mRNA-1:exon:1891;Parent=Msa0272260-mRNA-1
chr2_3 exon 3811059 3811178 3811059 ID=Msa0272260-mRNA-1:exon:1890;Parent=Msa0272260-mRNA-1
chr2_3 exon 3811274 3811308 3811274 ID=Msa0272260-mRNA-1:exon:1889;Parent=Msa0272260-mRNA-1
chr2_3 exon 3811912 3812056 3811912 ID=Msa0272260-mRNA-1:exon:1888;Parent=Msa0272260-mRNA-1
chr2_3 exon 3812136 3812378 3812136 ID=Msa0272260-mRNA-1:exon:1887;Parent=Msa0272260-mRNA-1
chr2_3 exon 3812528 3812725 3812528 ID=Msa0272260-mRNA-1:exon:1886;Parent=Msa0272260-mRNA-1
chr2_3 five_prime_UTR 3812570 3812725 3812570 ID=Msa0272260-mRNA-1:five_prime_utr;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3812528 3812569 3812528 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3812136 3812378 3812136 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3811912 3812056 3811912 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3811274 3811308 3811274 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3811059 3811178 3811059 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3810735 3810938 3810735 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3810166 3810375 3810166 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3810009 3810083 3810009 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3809483 3809629 3809483 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3809240 3809375 3809240 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3809003 3809112 3809003 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3808129 3808290 3808129 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3807847 3808034 3807847 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3807098 3807179 3807098 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3806915 3807019 3806915 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3806713 3806817 3806713 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 CDS 3806146 3806325 3806146 ID=Msa0272260-mRNA-1:cds;Parent=Msa0272260-mRNA-1
chr2_3 three_prime_UTR 3805738 3806145 3805738 ID=Msa0272260-mRNA-1:three_prime_utr;Parent=Msa0272260-mRNA-1
Gene Sequence

>Msa0272260

ATGTCTTCCCGGAATCAGAATCGGGCACCAAGCCCCTCCAACATGCAGAAAAAAGGGGGTGGTGCTGAAGAAAATAAGCGTAGAAGGATTGGTGGTGAAAGAATGGTCGTACAAGGTAGAGGTAGGGCTCCATTAGGTTCCCTCAACAACAAATCAGACACTAATGATGGTGCCGGTGCCGGTGCAACCGAGGGATCTGAGCCGAGCATCATTGAATTCACCAAAGAGGAAGTAGAAGCTTTATTGACTGAGAAGATGAAAAAGGGGAATCCCCTTGATACTAAGAAAAAAATGGAGCAGATGGTGGATCTTATCAAGCGACTTAAAAACTGTGTTAGATGGTTTAAGGTAGTTGAAGAAGGGTATATTAAAGAAAAAGAAAAGCTTCAGACAGATCTAGAATCTGCCGAGAAAAAATGCGTTGATACTGAAGAGAAAATTGCAAAGGAAGAATCAGATAAATTGGAAGTGATGGAATGTTATAGGAAAGAAAAAGAAGCCAGAAATGAAGCTGAGCAGATGCAAGTTTCTCTTTCAACTGAACTTGAGAGAGTTTGCAATGAGAAATCAGCTGCTGTGCGGCAGGCCACTGAAAATGAAAATTTGTACAATAGATCAAAAGAGTATAATATCAGTTTGCAGCAGTACAATAGTAGCCTTCAGGCAAATCTTGACGCAGCCAGTGCGGCCCAAAAACGACTGGAAACAGAGAAATCAAGTATTGTTGAGAACCTTAGCAATGTCAGAGGCCACAACAAGGCATTGCAAGAGCAGTTGGCATCTCATAAAGCTTCACAAGAAGAGGCTACAAAGGCAAAAGACATGTTAGCTAATGAACTCAAATGCCTCCGAGATGAACTAAAACAAATTAGAGACGACCGTGATCGCCAATTGGGACAAGTACAAGCTTTAACTGGAGAGGTAGCAAAATACAAAGAGTATACAGGGAAATCAAGTGAACAATTGGGTACATTGACAGCTAAAACAAATGCTCTCGAGGAGGTATGTACTTCACAAAGGCAACAAATAGATATGTTGCAGCAGCAGTTGAATGCCGAAAAGGAGAAGTTAAAGATGGCCGATTTGTCCTTTTCGGAAACACAAACGGTGTTTGAAGACCAGAAAAGAACTATAGGTCAACTACGAGAGAGACTGGCTGAAAAAGAGCTCCAAGTAATTGAAGGAGAGACATTACGTAAAAAATTGCACAACACTATTCTGGAATTAAAAGGAAATATCCGTGTGTTCTGCCGCGTTCGACCTTTGCTACCAGACGATGGTCCTGCAGCAGACATGGTAGTTTCTTTCCCTTCATCAACAGAAGCTCTTGGTCGAGGTGTTGAATTGGCACAGAGCGGCCAGAAGTATTCTTTTACATTTGATAAAGTATTTAATCAGGAGGCTTCACAGCAGGATGTTTTCACCGAGATTTCTCAGCTAGTACAAAGCGCGCTTGATGGGTACAAGGTTTGCATTTTTGCTTATGGACAAACAGGTTCTGGAAAAACCTATACGATGATTGGCAGGCCTGGCCCCCCGGAGCTCAAAGGCTTGATACCACGTTCACTTGAACAGATATTCCTCGTTAGTCAGTCTCTGAAAGATCAAGGGTGGAAGTACACAATGCAGGCTTCAGTACTTGAAATATACAACGAGACCATAAGGGATTTGTTATCACCAACAGAAAATCCTGGAAAGAAGTACAATATTATACACGATGCCAATGGAAAAAACACATATGTTCCGGACCTGACTATTGTGGATGTTTGCGGTGCAGATGAGATTTCCGCCCTTCTAAAACAGGCTGCACAAAGCAGGTCAGTAGGAAGAACACAGATGAATGAACAATCGTCGCGAAGTCACTTTGTCTTTACTCTGCGAATTAGTGGTGTTAATGAGAACACTGAACAGCAGGTTCAAGGTGTGCTAAACCTGATAGATCTTGCTGGAAGTGAAAGGCTGTCGAAAAGTGGAGCAACTGGGGACCGCCTGAATGAAACTAAGGCGATAAACAAAAGTCTCTCCTGTTTGAGTGATGTCATTTTTGCCTTGGCAAAGAAAGAGGATCATGTCCCCTTCAGGAATTCTAAACTGACAACCCTTCTCCAGCCATGTCTTGGCGGAGATTCTAAGACTTTGATGTTTGTAAATATTTCACCCGATCCATCTTCGACTGGAGAGTCACTTTGCTCTCTTCGTTTTGCCGCGAGAGTAAATAGTTGTGAGATTGGTATTCCTCGGCGCCAGACATCCATGAAGGCTTCTGATTCTCGTTTAAGCTATGGCTAA

Protein sequence

>Msa0272260

MSSRNQNRAPSPSNMQKKGGGAEENKRRRIGGERMVVQGRGRAPLGSLNNKSDTNDGAGAGATEGSEPSIIEFTKEEVEALLTEKMKKGNPLDTKKKMEQMVDLIKRLKNCVRWFKVVEEGYIKEKEKLQTDLESAEKKCVDTEEKIAKEESDKLEVMECYRKEKEARNEAEQMQVSLSTELERVCNEKSAAVRQATENENLYNRSKEYNISLQQYNSSLQANLDAASAAQKRLETEKSSIVENLSNVRGHNKALQEQLASHKASQEEATKAKDMLANELKCLRDELKQIRDDRDRQLGQVQALTGEVAKYKEYTGKSSEQLGTLTAKTNALEEVCTSQRQQIDMLQQQLNAEKEKLKMADLSFSETQTVFEDQKRTIGQLRERLAEKELQVIEGETLRKKLHNTILELKGNIRVFCRVRPLLPDDGPAADMVVSFPSSTEALGRGVELAQSGQKYSFTFDKVFNQEASQQDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMIGRPGPPELKGLIPRSLEQIFLVSQSLKDQGWKYTMQASVLEIYNETIRDLLSPTENPGKKYNIIHDANGKNTYVPDLTIVDVCGADEISALLKQAAQSRSVGRTQMNEQSSRSHFVFTLRISGVNENTEQQVQGVLNLIDLAGSERLSKSGATGDRLNETKAINKSLSCLSDVIFALAKKEDHVPFRNSKLTTLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNSCEIGIPRRQTSMKASDSRLSYG*