AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1214350


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214350 MtrunA17_Chr4g0062781 95.815 669 25 2 1 669 1 666 0.0 1300
Msa1214350 MtrunA17_Chr6g0475401 58.824 119 49 0 1 119 1 119 8.41e-42 159
Msa1214350 MtrunA17_Chr6g0475401 28.772 285 138 9 412 664 282 533 1.74e-22 101
Msa1214350 MtrunA17_Chr4g0033751 55.000 120 54 0 1 120 1 120 1.61e-39 155
Msa1214350 MtrunA17_Chr4g0033751 25.934 482 222 18 293 658 245 707 5.45e-20 94.7
Msa1214350 MtrunA17_Chr2g0329581 56.198 121 52 1 1 120 1 121 8.40e-39 153
Msa1214350 MtrunA17_Chr5g0413621 48.760 121 61 1 1 120 1 121 4.94e-33 134
Msa1214350 MtrunA17_Chr2g0309091 45.082 122 61 2 1 120 1 118 1.94e-21 99.0
Msa1214350 MtrunA17_Chr6g0475421 32.787 122 66 5 556 664 8 126 2.02e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214350 AT4G13370.1 52.624 705 261 19 1 665 1 672 0.0 624
Msa1214350 AT3G14170.2 53.600 125 58 0 1 125 1 125 3.03e-39 152
Msa1214350 AT3G14170.2 33.058 242 145 8 422 658 270 499 6.87e-21 97.1
Msa1214350 AT3G14170.1 53.600 125 58 0 1 125 1 125 3.17e-39 152
Msa1214350 AT3G14170.1 33.058 242 145 8 422 658 269 498 7.47e-21 97.1
Msa1214350 AT1G08760.1 54.167 120 55 0 1 120 1 120 1.00e-37 150
Msa1214350 AT1G08760.1 26.781 351 172 13 382 656 379 720 1.86e-20 96.7
Msa1214350 AT1G23790.1 48.760 121 61 1 1 120 1 121 2.81e-31 129
Msa1214350 AT1G23790.1 25.088 283 183 5 332 606 215 476 7.58e-12 68.9
Msa1214350 AT1G70340.1 46.667 120 63 1 1 119 1 120 1.10e-28 120
Msa1214350 AT1G70340.1 27.320 194 115 5 418 592 266 452 5.63e-11 65.9
Msa1214350 AT3G19610.1 40.833 120 70 1 1 119 29 148 3.82e-23 104
Msa1214350 AT3G19610.1 26.389 288 170 8 405 659 331 609 8.69e-16 81.6
Msa1214350 AT2G31920.1 39.583 144 68 6 1 126 1 143 3.42e-18 89.0

Find 191 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTGCTTGGAGGAGTTTA+AGG 0.173480 8_1:+74903374 None:intergenic
TTTCTGATTTACTTTGACTA+TGG 0.254593 8_1:-74900694 Msa1214350:three_prime_UTR
GCTAGCTTATGAAGTTGATT+AGG 0.264854 8_1:-74900620 Msa1214350:three_prime_UTR
AATCAAAGTCCATCTCTCTT+TGG 0.278109 8_1:-74901193 Msa1214350:CDS
CTCAATAATCGTCTTCAATT+AGG 0.282819 8_1:-74903178 Msa1214350:CDS
CTCTTCTCCTCAAAGTTGTT+TGG 0.293151 8_1:-74902104 Msa1214350:CDS
CAAATGTGTGGTTCCGAGTT+TGG 0.301462 8_1:-74902723 Msa1214350:CDS
CAGCCAGTGCGATTGATCTT+AGG 0.304082 8_1:+74901258 None:intergenic
CTAGCTTATGAAGTTGATTA+GGG 0.311335 8_1:-74900619 Msa1214350:three_prime_UTR
TCTTTGGGTTGAAGCTGCTT+TGG 0.323248 8_1:-74901177 Msa1214350:CDS
CTTGGAGGAGTTTAAGGATT+AGG 0.325289 8_1:+74903380 None:intergenic
CGAAGACCGCGAGGAAGAAT+TGG 0.326678 8_1:-74902454 Msa1214350:CDS
TTTCACCATCCAACCGTTAT+CGG 0.326796 8_1:-74903017 Msa1214350:CDS
GGAGAAATGGAAGCTCTTCT+AGG 0.336586 8_1:+74902590 None:intergenic
ATCAAAGTCCATCTCTCTTT+GGG 0.337514 8_1:-74901192 Msa1214350:CDS
GAAGCAGGATTTAAAGTGTT+TGG 0.350982 8_1:-74900954 Msa1214350:CDS
AATGTATAATAAGAAATTTA+AGG 0.353960 8_1:-74901580 Msa1214350:intron
CAAACTCGGAACCACACATT+TGG 0.375036 8_1:+74902724 None:intergenic
AAATCCAAGTTTGCAGGTCT+TGG 0.376268 8_1:-74902073 Msa1214350:CDS
CTGTGTCTGGCAAACTTTCA+AGG 0.377282 8_1:-74901997 Msa1214350:CDS
CAATCTTCTCCCCGGAGAAA+TGG 0.380821 8_1:+74902577 None:intergenic
TCACAATCTGCAGGGAAGTT+TGG 0.388321 8_1:-74902815 Msa1214350:CDS
GCCACCAAGACCTGCAAACT+TGG 0.401930 8_1:+74902069 None:intergenic
ATACGAGCTACGAGTGGTTC+CGG 0.406699 8_1:+74903058 None:intergenic
TTCATCTTCCCCGCCGGAGA+TGG 0.407138 8_1:+74902770 None:intergenic
TTACAATTCATGAAAAGAAA+TGG 0.412348 8_1:-74902045 Msa1214350:CDS
TTCTGATATGTTGGCTGGAT+CGG 0.412742 8_1:-74902477 Msa1214350:CDS
GTTCCTCTTGATGCTGTGTC+TGG 0.415818 8_1:-74902010 Msa1214350:CDS
TCTGGCAAACTTTCAAGGCT+TGG 0.416539 8_1:-74901992 Msa1214350:CDS
ACACTTTAAATCCTGCTTCA+AGG 0.421734 8_1:+74900958 None:intergenic
TCTACCTCCAAACAACTTTG+AGG 0.422189 8_1:+74902097 None:intergenic
AAGATTTCTGATATGTTGGC+TGG 0.422950 8_1:-74902482 Msa1214350:CDS
TTCTAAGATTTCTGATATGT+TGG 0.426049 8_1:-74902486 Msa1214350:CDS
GTGGAGAGGTAGAGTGAAAG+AGG 0.431952 8_1:+74902983 None:intergenic
TAGAAGAGCTTCCATTTCTC+CGG 0.433087 8_1:-74902588 Msa1214350:CDS
AAGGGGTGGCGCGTGGGGAG+AGG 0.444224 8_1:+74903091 None:intergenic
AGCGATCAACGTAGAGGAAC+TGG 0.452421 8_1:+74903155 None:intergenic
CACTTTAAATCCTGCTTCAA+GGG 0.454714 8_1:+74900959 None:intergenic
TTGAGAATGAGATCGGTGTC+AGG 0.455000 8_1:+74903196 None:intergenic
GAGTGTTGGTTCTAAAACTA+GGG 0.457173 8_1:-74902396 Msa1214350:CDS
CGACGAAGGGGTGGCGCGTG+GGG 0.457884 8_1:+74903086 None:intergenic
AGAGTGTTGGTTCTAAAACT+AGG 0.458292 8_1:-74902397 Msa1214350:CDS
ATGGAAGCTCTTCTAGGATT+CGG 0.459733 8_1:+74902596 None:intergenic
GCGAAGAAGAAGATGGTAGC+TGG 0.461789 8_1:-74902512 Msa1214350:CDS
TCTTAGGACATCATCATAGA+TGG 0.462692 8_1:+74901274 None:intergenic
TTGGACCGCGTGGTTTCTAA+AGG 0.464455 8_1:-74900840 Msa1214350:CDS
ATTTAACCATTGAGTCATCA+TGG 0.467127 8_1:+74900548 None:intergenic
GTAGAGAAATCCAAGTTTGC+AGG 0.469399 8_1:-74902079 Msa1214350:CDS
AAAATAATTCAGGATGAAGC+AGG 0.470051 8_1:+74900720 None:intergenic
TCCGACGAAGGGGTGGCGCG+TGG 0.470364 8_1:+74903084 None:intergenic
CGGGTACAATTCCGATGAGT+TGG 0.471036 8_1:+74903308 None:intergenic
GTTGAAGAATCCCTTGAAGC+AGG 0.472477 8_1:-74900969 Msa1214350:CDS
AGGACAATCGGAAGGTTTCA+CGG 0.472653 8_1:-74902688 Msa1214350:CDS
TATTATACATTCAGTAGCAT+TGG 0.478800 8_1:+74901592 None:intergenic
GGCTGCTTCCTTGCCGTCGT+CGG 0.478828 8_1:+74902623 None:intergenic
CCATTGTTGTGAATTGAGTT+GGG 0.480354 8_1:+74903419 None:intergenic
ACATCTAAGAGTCAAGGAAA+TGG 0.484092 8_1:-74901059 Msa1214350:CDS
AGAAGAGCTTCCATTTCTCC+GGG 0.485310 8_1:-74902587 Msa1214350:CDS
GAAGACCGCGAGGAAGAATT+GGG 0.485667 8_1:-74902453 Msa1214350:CDS
TCCAAGTTTGCAGGTCTTGG+TGG 0.486001 8_1:-74902070 Msa1214350:CDS
CTCCATCAGAACTTCAGAAA+AGG 0.488000 8_1:-74901106 Msa1214350:CDS
TTCTCCTCAAAGTTGTTTGG+AGG 0.492108 8_1:-74902101 Msa1214350:CDS
CCGACGAAGGGGTGGCGCGT+GGG 0.494772 8_1:+74903085 None:intergenic
ACCACACATTTGGACGGTAC+TGG 0.494996 8_1:+74902734 None:intergenic
TTGTGCGGTGGTCGTGTTGG+TGG 0.495177 8_1:+74902964 None:intergenic
GCCATTGTTGTGAATTGAGT+TGG 0.498363 8_1:+74903418 None:intergenic
TGGACCGCGTGGTTTCTAAA+GGG 0.500717 8_1:-74900839 Msa1214350:CDS
TTAAATCAAACTCGAAGTTA+CGG 0.502752 8_1:+74900591 None:intergenic
TGCTGCTGCAGCATTAGAAG+AGG 0.503717 8_1:-74901615 Msa1214350:CDS
ATGGACTTTGATTGACATGT+TGG 0.503918 8_1:+74901203 None:intergenic
TAGACAGCCGTCTCCGACGA+CGG 0.506706 8_1:-74902636 Msa1214350:CDS
TGACAGAAGGAAGAGGGGTG+TGG 0.507074 8_1:+74903125 None:intergenic
TGGTTCCGGCGTTCCGACGA+AGG 0.509243 8_1:+74903072 None:intergenic
AACAAACCATGATGACTCAA+TGG 0.509923 8_1:-74900554 Msa1214350:three_prime_UTR
ATGAAAGAAACACTGGAGCT+TGG 0.510836 8_1:-74901035 Msa1214350:CDS
TTCCTTGCCGTCGTCGGAGA+CGG 0.511810 8_1:+74902629 None:intergenic
AACACCGACACACGTGTCAC+CGG 0.513735 8_1:-74903352 Msa1214350:CDS
AGATGAGCAATGTTCATTCA+CGG 0.514388 8_1:-74902907 Msa1214350:CDS
GGTTCCGGCGTTCCGACGAA+GGG 0.515235 8_1:+74903073 None:intergenic
GCTAAACGATCACAATCTGC+AGG 0.518004 8_1:-74902824 Msa1214350:CDS
TTTCTGCTCGAGAGGACAAT+CGG 0.518876 8_1:-74902700 Msa1214350:CDS
GTGTGTCGGTGTTCATTGCT+TGG 0.523224 8_1:+74903362 None:intergenic
GTTGAGAAAGAAGCCTTCGT+TGG 0.523258 8_1:+74903261 None:intergenic
AAGAGGAGAACGGTGGTCGC+CGG 0.524267 8_1:+74903333 None:intergenic
CCCACGCGCCACCCCTTCGT+CGG 0.526098 8_1:-74903085 Msa1214350:CDS
TGGGATGAACAAAATGTTGA+AGG 0.528068 8_1:-74902434 Msa1214350:CDS
GTAGAGTGAAAGAGGGTCAT+CGG 0.531370 8_1:+74902991 None:intergenic
CATGAAAAGAAATGGACTGA+TGG 0.533330 8_1:-74902037 Msa1214350:CDS
GATGAAAATCTCTTCGGAGT+TGG 0.540097 8_1:+74902857 None:intergenic
TCCGATCTCTTCTCCAACGA+AGG 0.541927 8_1:-74903274 Msa1214350:CDS
GGGTCATCGGAATCCGATAA+CGG 0.544450 8_1:+74903004 None:intergenic
GGACAATCGGAAGGTTTCAC+GGG 0.547990 8_1:-74902687 Msa1214350:CDS
GTTGGAGAAGAGATCGGAGC+TGG 0.548071 8_1:+74903279 None:intergenic
GCCGGAGATGAAAATCTCTT+CGG 0.550213 8_1:+74902851 None:intergenic
GAAGCGAGTAAATGCATGGT+TGG 0.550345 8_1:-74900859 Msa1214350:CDS
CATCGGAATCCGATAACGGT+TGG 0.551577 8_1:+74903008 None:intergenic
AACTTGTCTATGGTTGGCAA+AGG 0.553870 8_1:+74901302 None:intergenic
CAAAAGTTGATCCTACATGC+TGG 0.555614 8_1:+74900757 None:intergenic
TGGGAAGAAAGCATTGCCTC+TGG 0.557044 8_1:-74900916 Msa1214350:CDS
TGGAGAGGTAGAGTGAAAGA+GGG 0.559288 8_1:+74902984 None:intergenic
GGACGAATGTTGGTGACAGA+AGG 0.561250 8_1:+74903112 None:intergenic
TCTCCGGGGAGAAGATTGTC+CGG 0.562207 8_1:-74902572 Msa1214350:CDS
GAGTTTGGTTTCTGCTCGAG+AGG 0.563793 8_1:-74902708 Msa1214350:CDS
CAAACTTTCAAGGCTTGGAA+AGG 0.566906 8_1:-74901987 Msa1214350:intron
GAGATCGGAGCTGGATAAAG+CGG 0.567835 8_1:+74903288 None:intergenic
TGCTCGAGAGGACAATCGGA+AGG 0.568084 8_1:-74902696 Msa1214350:CDS
CCGGCGTTCCGACGAAGGGG+TGG 0.569095 8_1:+74903077 None:intergenic
TACTGTCAGAAATGCAAATG+TGG 0.570442 8_1:-74901004 Msa1214350:CDS
GAGAGAGATCCATCTCCGGC+GGG 0.572867 8_1:-74902779 Msa1214350:CDS
ACGATTATTGAGAATGAGAT+CGG 0.574044 8_1:+74903189 None:intergenic
CGAAGAAGAAGATGGTAGCT+GGG 0.578184 8_1:-74902511 Msa1214350:CDS
TCTCCTCTTCTCCAACTCAT+CGG 0.580371 8_1:-74903319 Msa1214350:CDS
AAATAATTCAGGATGAAGCA+GGG 0.580487 8_1:+74900721 None:intergenic
TTTGGCAGGTTGCAATGACA+AGG 0.581622 8_1:-74902198 Msa1214350:intron
AAATGGAATGAAAGAAACAC+TGG 0.581658 8_1:-74901042 Msa1214350:CDS
TTCTACTGCGAAGAAGAAGA+TGG 0.582612 8_1:-74902519 Msa1214350:CDS
AGCCGTCTCCGACGACGGCA+AGG 0.583416 8_1:-74902631 Msa1214350:CDS
CTTAGCACATCTAAGAGTCA+AGG 0.583945 8_1:-74901065 Msa1214350:CDS
GCAGTAGAATCTCCAACAGC+CGG 0.584352 8_1:+74902533 None:intergenic
ATGTGACAAAACAATAGCAA+TGG 0.584972 8_1:+74900884 None:intergenic
GAACCTAAAGAAAAGAGTGT+TGG 0.585985 8_1:-74902410 Msa1214350:CDS
GTGAGAGAGAAGAACGTAGG+TGG 0.587901 8_1:+74903219 None:intergenic
CGTGGGGAGAGGACGAATGT+TGG 0.589608 8_1:+74903102 None:intergenic
AGGAGTTTAAGGATTAGGCC+TGG 0.590416 8_1:+74903385 None:intergenic
TGCTGAGAGAGATCCATCTC+CGG 0.591594 8_1:-74902783 Msa1214350:CDS
CCACCCCTTCGTCGGAACGC+CGG 0.591684 8_1:-74903077 Msa1214350:CDS
AGATTGTGCGGTGGTCGTGT+TGG 0.593195 8_1:+74902961 None:intergenic
CTCGGAACCACACATTTGGA+CGG 0.593446 8_1:+74902728 None:intergenic
TTAGAGCTTGTTTGTCAATG+TGG 0.593742 8_1:-74900525 Msa1214350:three_prime_UTR
TGTTGGTGACAGAAGGAAGA+GGG 0.595214 8_1:+74903119 None:intergenic
AGATCGGAGCTGGATAAAGC+GGG 0.597846 8_1:+74903289 None:intergenic
CGGTGGTCGTGTTGGTGGAG+AGG 0.598089 8_1:+74902969 None:intergenic
TGGCTTTACACACAGAGCAA+AGG 0.599456 8_1:+74901330 None:intergenic
AAAGCATTGCCTCTGGATGG+TGG 0.600362 8_1:-74900909 Msa1214350:CDS
CCACCGGACAATCTTCTCCC+CGG 0.602241 8_1:+74902569 None:intergenic
GCCTTCGTTGGAGAAGAGAT+CGG 0.602669 8_1:+74903273 None:intergenic
CGGCGAAAACTTGATTCCAC+CGG 0.606042 8_1:+74902553 None:intergenic
GGAATCCGATAACGGTTGGA+TGG 0.609247 8_1:+74903012 None:intergenic
AGCTTCAACCCAAAGAGAGA+TGG 0.609494 8_1:+74901184 None:intergenic
ATTCCGATGAGTTGGAGAAG+AGG 0.613210 8_1:+74903316 None:intergenic
TTGCCAGACACAGCATCAAG+AGG 0.613318 8_1:+74902007 None:intergenic
TGAGAATGAGATCGGTGTCA+GGG 0.613668 8_1:+74903197 None:intergenic
GATCTCTTCATCTTCCCCGC+CGG 0.614124 8_1:+74902764 None:intergenic
AAATTATCTCGTGGAGCAAG+TGG 0.614804 8_1:+74902881 None:intergenic
ACCAGTACCGTCCAAATGTG+TGG 0.616450 8_1:-74902735 Msa1214350:CDS
GAATCCAGGATGCAATGGAA+AGG 0.616518 8_1:-74901658 Msa1214350:intron
TTGGAGAGAGTGCTAGTGGT+GGG 0.617153 8_1:-74900935 Msa1214350:CDS
GAACTGAATCCAGGATGCAA+TGG 0.617581 8_1:-74901663 Msa1214350:intron
TGAGAGAGATCCATCTCCGG+CGG 0.617931 8_1:-74902780 Msa1214350:CDS
TTAGATGTGCTAAGAGAGTG+TGG 0.620341 8_1:+74901074 None:intergenic
TGGAGTTGAGAGAATCAGAG+AGG 0.621797 8_1:+74903239 None:intergenic
ATTTGAAGCGAGTAAATGCA+TGG 0.624105 8_1:-74900863 Msa1214350:CDS
TTCATCCCAATTCTTCCTCG+CGG 0.625235 8_1:+74902448 None:intergenic
GTGTTTGGAGAGAGTGCTAG+TGG 0.625689 8_1:-74900939 Msa1214350:CDS
GTTGGTGACAGAAGGAAGAG+GGG 0.626731 8_1:+74903120 None:intergenic
AATAATTCAGGATGAAGCAG+GGG 0.629849 8_1:+74900722 None:intergenic
GATGTTGATATTCTGATGAA+AGG 0.630397 8_1:-74900672 Msa1214350:three_prime_UTR
GGAGTTGGTAAATTATCTCG+TGG 0.631582 8_1:+74902872 None:intergenic
CCCAACTCAATTCACAACAA+TGG 0.633848 8_1:-74903419 Msa1214350:exon
TGTCCTAAGATCAATCGCAC+TGG 0.634675 8_1:-74901261 Msa1214350:CDS
GCTCTTCTAGGATTCGGCGA+AGG 0.635698 8_1:+74902602 None:intergenic
AAGAAAGCATTGCCTCTGGA+TGG 0.635733 8_1:-74900912 Msa1214350:CDS
AAATGCATGGTTGGACCGCG+TGG 0.636414 8_1:-74900850 Msa1214350:CDS
ATGTTGGTGACAGAAGGAAG+AGG 0.638385 8_1:+74903118 None:intergenic
ATGGTGAAATGACGAGTGGT+AGG 0.640964 8_1:+74903031 None:intergenic
ACAATGGCTTCACTAACACC+AGG 0.650124 8_1:-74903403 Msa1214350:CDS
GACGGCTGTCTATACCTCGA+CGG 0.652957 8_1:+74902647 None:intergenic
TGTCGGTGTTCATTGCTTGG+AGG 0.653806 8_1:+74903365 None:intergenic
TGAGTTGGAGAAGAGGAGAA+CGG 0.654800 8_1:+74903323 None:intergenic
GGATACTATCTGAAGATCAG+TGG 0.655304 8_1:+74901154 None:intergenic
TCTCGAGCAGAAACCAAACT+CGG 0.655575 8_1:+74902710 None:intergenic
GTCGCCGGTGACACGTGTGT+CGG 0.656725 8_1:+74903348 None:intergenic
TTTGGAGAGAGTGCTAGTGG+TGG 0.657547 8_1:-74900936 Msa1214350:CDS
GTTCCGGCGTTCCGACGAAG+GGG 0.658890 8_1:+74903074 None:intergenic
AGAGAGATCCATCTCCGGCG+GGG 0.662479 8_1:-74902778 Msa1214350:CDS
AGGGTGAGAGAGAAGAACGT+AGG 0.672472 8_1:+74903216 None:intergenic
AATGAAAGCGATCAACGTAG+AGG 0.674194 8_1:+74903149 None:intergenic
CCGCAATTATTGTTCCGTCG+AGG 0.674338 8_1:-74902661 Msa1214350:CDS
CTAAACGATCACAATCTGCA+GGG 0.675497 8_1:-74902823 Msa1214350:CDS
GCAATGGAGCCACCATCCAG+AGG 0.690113 8_1:+74900900 None:intergenic
CCGGGGAGAAGATTGTCCGG+TGG 0.691617 8_1:-74902569 Msa1214350:CDS
CTGGATCGGCGAAGACCGCG+AGG 0.692993 8_1:-74902463 Msa1214350:CDS
CCTCGACGGAACAATAATTG+CGG 0.694736 8_1:+74902661 None:intergenic
AATCAAACTCGAAGTTACGG+CGG 0.702084 8_1:+74900594 None:intergenic
GGTGAAATACGAGCTACGAG+TGG 0.708456 8_1:+74903052 None:intergenic
GAAGAGCTTCCATTTCTCCG+GGG 0.716426 8_1:-74902586 Msa1214350:CDS
TTGAATCGGAGATTGTGCGG+TGG 0.720884 8_1:+74902952 None:intergenic
GTTGGAGAAGAGGAGAACGG+TGG 0.749997 8_1:+74903326 None:intergenic
TTGGATGGTGAAATGACGAG+TGG 0.760115 8_1:+74903027 None:intergenic
AGAGATATAATAATACAGAG+CGG 0.775514 8_1:+74903459 None:intergenic
GATTCCCTTTAGAAACCACG+CGG 0.796785 8_1:+74900835 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTATAT+AGG - chr8_1:74901667-74901686 Msa1214350:intron 0.0%
!!! TTTTTTTTTTTTTTTATATA+GGG - chr8_1:74901668-74901687 Msa1214350:intron 0.0%
!! AATGTATAATAAGAAATTTA+AGG - chr8_1:74902401-74902420 Msa1214350:CDS 10.0%
!! AAATTAAAGAGAAAAATCTA+TGG - chr8_1:74903192-74903211 Msa1214350:CDS 15.0%
!! TTACAATTCATGAAAAGAAA+TGG - chr8_1:74901936-74901955 Msa1214350:intron 20.0%
!!! TTTCTAGTGATCTTATAATA+TGG - chr8_1:74902043-74902062 Msa1214350:CDS 20.0%
!! TTTATTTACTTCCTCTTTAA+TGG - chr8_1:74902568-74902587 Msa1214350:CDS 20.0%
!! TCAGAAAACAAAAATAATTC+AGG + chr8_1:74903274-74903293 None:intergenic 20.0%
! AGAGATATAATAATACAGAG+CGG + chr8_1:74900525-74900544 None:intergenic 25.0%
!!! TGTTGTTGATTGTTTTGAAT+CGG + chr8_1:74901046-74901065 None:intergenic 25.0%
!!! TTCTAAGATTTCTGATATGT+TGG - chr8_1:74901495-74901514 Msa1214350:intron 25.0%
! AATTTAGATTGAGCTAAGAA+TGG - chr8_1:74901711-74901730 Msa1214350:intron 25.0%
!!! TGAAATGATGCAGATTTTTT+TGG - chr8_1:74901765-74901784 Msa1214350:intron 25.0%
!! AATCATTGTCATCTGATTTT+CGG + chr8_1:74901829-74901848 None:intergenic 25.0%
! GTTTATGCATTAGAAATGAT+AGG - chr8_1:74902167-74902186 Msa1214350:CDS 25.0%
! TTGAAGGCAAAATTGATTAA+AGG - chr8_1:74902265-74902284 Msa1214350:intron 25.0%
! TATTATACATTCAGTAGCAT+TGG + chr8_1:74902392-74902411 None:intergenic 25.0%
! AATGATCCATTTACTATTCA+AGG - chr8_1:74902526-74902545 Msa1214350:CDS 25.0%
! ATGATCCATTTACTATTCAA+GGG - chr8_1:74902527-74902546 Msa1214350:CDS 25.0%
! TTAAACCCTTGAATAGTAAA+TGG + chr8_1:74902535-74902554 None:intergenic 25.0%
!!! TATGTCATTTTCAGTAAGAA+GGG + chr8_1:74902851-74902870 None:intergenic 25.0%
! TTTCTGATTTACTTTGACTA+TGG - chr8_1:74903287-74903306 Msa1214350:CDS 25.0%
! TTAAATCAAACTCGAAGTTA+CGG + chr8_1:74903393-74903412 None:intergenic 25.0%
ACGATTATTGAGAATGAGAT+CGG + chr8_1:74900795-74900814 None:intergenic 30.0%
CTCAATAATCGTCTTCAATT+AGG - chr8_1:74900803-74900822 Msa1214350:CDS 30.0%
!! TCAATCAATTTTGAGAACTC+AGG - chr8_1:74901615-74901634 Msa1214350:CDS 30.0%
!!! GCTTGGAAAGGTATTAATTT+TGG - chr8_1:74902006-74902025 Msa1214350:CDS 30.0%
GCAAAATAATGGTCAATTCA+AGG + chr8_1:74902226-74902245 None:intergenic 30.0%
GAGCAAAAACAGCAAAATAA+TGG + chr8_1:74902237-74902256 None:intergenic 30.0%
!! TTTTGCTCTATTCGATTTGA+AGG - chr8_1:74902249-74902268 Msa1214350:intron 30.0%
! TTTTATTGTGAACTGAATCC+AGG - chr8_1:74902309-74902328 Msa1214350:intron 30.0%
!! TTTGACCTGGTTTTTAACAT+TGG - chr8_1:74902435-74902454 Msa1214350:CDS 30.0%
TATACCAAAGTTAAGTCCAT+TGG - chr8_1:74902472-74902491 Msa1214350:CDS 30.0%
TAAAATGAAGACAATGCCAA+TGG + chr8_1:74902491-74902510 None:intergenic 30.0%
GTAAAAAACTTGTCTATGGT+TGG + chr8_1:74902688-74902707 None:intergenic 30.0%
GATGGTAAAAAACTTGTCTA+TGG + chr8_1:74902692-74902711 None:intergenic 30.0%
!!! CTATGTCATTTTCAGTAAGA+AGG + chr8_1:74902852-74902871 None:intergenic 30.0%
AAATGGAATGAAAGAAACAC+TGG - chr8_1:74902939-74902958 Msa1214350:CDS 30.0%
ATGTGACAAAACAATAGCAA+TGG + chr8_1:74903100-74903119 None:intergenic 30.0%
AAATAATTCAGGATGAAGCA+GGG + chr8_1:74903263-74903282 None:intergenic 30.0%
AAAATAATTCAGGATGAAGC+AGG + chr8_1:74903264-74903283 None:intergenic 30.0%
GATGTTGATATTCTGATGAA+AGG - chr8_1:74903309-74903328 Msa1214350:CDS 30.0%
! CTAGCTTATGAAGTTGATTA+GGG - chr8_1:74903362-74903381 Msa1214350:CDS 30.0%
ATTTAACCATTGAGTCATCA+TGG + chr8_1:74903436-74903455 None:intergenic 30.0%
CCATTGTTGTGAATTGAGTT+GGG + chr8_1:74900565-74900584 None:intergenic 35.0%
AGATGAGCAATGTTCATTCA+CGG - chr8_1:74901074-74901093 Msa1214350:CDS 35.0%
AAGATTTCTGATATGTTGGC+TGG - chr8_1:74901499-74901518 Msa1214350:intron 35.0%
TGGGATGAACAAAATGTTGA+AGG - chr8_1:74901547-74901566 Msa1214350:intron 35.0%
! GAACCTAAAGAAAAGAGTGT+TGG - chr8_1:74901571-74901590 Msa1214350:intron 35.0%
! GAACCAACACTCTTTTCTTT+AGG + chr8_1:74901577-74901596 None:intergenic 35.0%
!! AGAGTGTTGGTTCTAAAACT+AGG - chr8_1:74901584-74901603 Msa1214350:CDS 35.0%
!! GAGTGTTGGTTCTAAAACTA+GGG - chr8_1:74901585-74901604 Msa1214350:CDS 35.0%
!!! ATGATGCAGATTTTTTTGGC+AGG - chr8_1:74901769-74901788 Msa1214350:intron 35.0%
!! CATGAAAAGAAATGGACTGA+TGG - chr8_1:74901944-74901963 Msa1214350:intron 35.0%
TAGGTTTATAGATGATAGCC+TGG - chr8_1:74902186-74902205 Msa1214350:CDS 35.0%
TTTATAGATGATAGCCTGGT+TGG - chr8_1:74902190-74902209 Msa1214350:CDS 35.0%
TTATAGATGATAGCCTGGTT+GGG - chr8_1:74902191-74902210 Msa1214350:CDS 35.0%
CAGTTCCAATGTTAAAAACC+AGG + chr8_1:74902443-74902462 None:intergenic 35.0%
! AATGCCAATGGACTTAACTT+TGG + chr8_1:74902479-74902498 None:intergenic 35.0%
ATACATGTCAGCCATTAAAG+AGG + chr8_1:74902582-74902601 None:intergenic 35.0%
! TATGGTTGGCAAAGGATTTT+TGG + chr8_1:74902674-74902693 None:intergenic 35.0%
TCTTAGGACATCATCATAGA+TGG + chr8_1:74902710-74902729 None:intergenic 35.0%
ATGGACTTTGATTGACATGT+TGG + chr8_1:74902781-74902800 None:intergenic 35.0%
AATCAAAGTCCATCTCTCTT+TGG - chr8_1:74902788-74902807 Msa1214350:CDS 35.0%
ATCAAAGTCCATCTCTCTTT+GGG - chr8_1:74902789-74902808 Msa1214350:CDS 35.0%
ACATCTAAGAGTCAAGGAAA+TGG - chr8_1:74902922-74902941 Msa1214350:CDS 35.0%
TACTGTCAGAAATGCAAATG+TGG - chr8_1:74902977-74902996 Msa1214350:CDS 35.0%
CACTTTAAATCCTGCTTCAA+GGG + chr8_1:74903025-74903044 None:intergenic 35.0%
ACACTTTAAATCCTGCTTCA+AGG + chr8_1:74903026-74903045 None:intergenic 35.0%
! GAAGCAGGATTTAAAGTGTT+TGG - chr8_1:74903027-74903046 Msa1214350:CDS 35.0%
! ATTTGAAGCGAGTAAATGCA+TGG - chr8_1:74903118-74903137 Msa1214350:CDS 35.0%
AATAATTCAGGATGAAGCAG+GGG + chr8_1:74903262-74903281 None:intergenic 35.0%
! GCTAGCTTATGAAGTTGATT+AGG - chr8_1:74903361-74903380 Msa1214350:CDS 35.0%
AACAAACCATGATGACTCAA+TGG - chr8_1:74903427-74903446 Msa1214350:five_prime_UTR 35.0%
! TTAGAGCTTGTTTGTCAATG+TGG - chr8_1:74903456-74903475 Msa1214350:five_prime_UTR 35.0%
CCCAACTCAATTCACAACAA+TGG - chr8_1:74900562-74900581 Msa1214350:three_prime_UTR 40.0%
GCCATTGTTGTGAATTGAGT+TGG + chr8_1:74900566-74900585 None:intergenic 40.0%
CTTGGAGGAGTTTAAGGATT+AGG + chr8_1:74900604-74900623 None:intergenic 40.0%
TCATTGCTTGGAGGAGTTTA+AGG + chr8_1:74900610-74900629 None:intergenic 40.0%
AATGAAAGCGATCAACGTAG+AGG + chr8_1:74900835-74900854 None:intergenic 40.0%
TTTCACCATCCAACCGTTAT+CGG - chr8_1:74900964-74900983 Msa1214350:CDS 40.0%
!! GTTTTGAATCGGAGATTGTG+CGG + chr8_1:74901035-74901054 None:intergenic 40.0%
AAATTATCTCGTGGAGCAAG+TGG + chr8_1:74901103-74901122 None:intergenic 40.0%
!! GGAGTTGGTAAATTATCTCG+TGG + chr8_1:74901112-74901131 None:intergenic 40.0%
GATGAAAATCTCTTCGGAGT+TGG + chr8_1:74901127-74901146 None:intergenic 40.0%
! TCCGAAGAGATTTTCATCTC+CGG - chr8_1:74901129-74901148 Msa1214350:CDS 40.0%
CTAAACGATCACAATCTGCA+GGG - chr8_1:74901158-74901177 Msa1214350:CDS 40.0%
!! ATGGAAGCTCTTCTAGGATT+CGG + chr8_1:74901388-74901407 None:intergenic 40.0%
TAGAAGAGCTTCCATTTCTC+CGG - chr8_1:74901393-74901412 Msa1214350:intron 40.0%
TTCTACTGCGAAGAAGAAGA+TGG - chr8_1:74901462-74901481 Msa1214350:intron 40.0%
! TTCTGATATGTTGGCTGGAT+CGG - chr8_1:74901504-74901523 Msa1214350:intron 40.0%
CTCTTCTCCTCAAAGTTGTT+TGG - chr8_1:74901877-74901896 Msa1214350:intron 40.0%
TTCTCCTCAAAGTTGTTTGG+AGG - chr8_1:74901880-74901899 Msa1214350:intron 40.0%
TCTACCTCCAAACAACTTTG+AGG + chr8_1:74901887-74901906 None:intergenic 40.0%
GTAGAGAAATCCAAGTTTGC+AGG - chr8_1:74901902-74901921 Msa1214350:intron 40.0%
AAATCCAAGTTTGCAGGTCT+TGG - chr8_1:74901908-74901927 Msa1214350:intron 40.0%
CAAACTTTCAAGGCTTGGAA+AGG - chr8_1:74901994-74902013 Msa1214350:CDS 40.0%
!! TGTCACGCTGCAATTTTTAG+TGG + chr8_1:74902106-74902125 None:intergenic 40.0%
!!! AAGGTTTTAAGAACCCAACC+AGG + chr8_1:74902207-74902226 None:intergenic 40.0%
GGTAACGATTTCATTTGACC+TGG - chr8_1:74902422-74902441 Msa1214350:CDS 40.0%
AACTTGTCTATGGTTGGCAA+AGG + chr8_1:74902682-74902701 None:intergenic 40.0%
GGATACTATCTGAAGATCAG+TGG + chr8_1:74902830-74902849 None:intergenic 40.0%
CTCCATCAGAACTTCAGAAA+AGG - chr8_1:74902875-74902894 Msa1214350:CDS 40.0%
!!! AGCCTTTTCTGAAGTTCTGA+TGG + chr8_1:74902880-74902899 None:intergenic 40.0%
TTAGATGTGCTAAGAGAGTG+TGG + chr8_1:74902910-74902929 None:intergenic 40.0%
CTTAGCACATCTAAGAGTCA+AGG - chr8_1:74902916-74902935 Msa1214350:CDS 40.0%
ATGAAAGAAACACTGGAGCT+TGG - chr8_1:74902946-74902965 Msa1214350:CDS 40.0%
!!! GGTTTTGTTATCCAGCATGT+AGG - chr8_1:74903213-74903232 Msa1214350:CDS 40.0%
! CAAAAGTTGATCCTACATGC+TGG + chr8_1:74903227-74903246 None:intergenic 40.0%
AATCAAACTCGAAGTTACGG+CGG + chr8_1:74903390-74903409 None:intergenic 40.0%
ACAATGGCTTCACTAACACC+AGG - chr8_1:74900578-74900597 Msa1214350:three_prime_UTR 45.0%
AGGAGTTTAAGGATTAGGCC+TGG + chr8_1:74900599-74900618 None:intergenic 45.0%
! TGAGTTGGAGAAGAGGAGAA+CGG + chr8_1:74900661-74900680 None:intergenic 45.0%
TCTCCTCTTCTCCAACTCAT+CGG - chr8_1:74900662-74900681 Msa1214350:three_prime_UTR 45.0%
! ATTCCGATGAGTTGGAGAAG+AGG + chr8_1:74900668-74900687 None:intergenic 45.0%
GTTGAGAAAGAAGCCTTCGT+TGG + chr8_1:74900723-74900742 None:intergenic 45.0%
TGGAGTTGAGAGAATCAGAG+AGG + chr8_1:74900745-74900764 None:intergenic 45.0%
!! TGAGAATGAGATCGGTGTCA+GGG + chr8_1:74900787-74900806 None:intergenic 45.0%
! TTGAGAATGAGATCGGTGTC+AGG + chr8_1:74900788-74900807 None:intergenic 45.0%
!! TGTTGGTGACAGAAGGAAGA+GGG + chr8_1:74900865-74900884 None:intergenic 45.0%
!! ATGTTGGTGACAGAAGGAAG+AGG + chr8_1:74900866-74900885 None:intergenic 45.0%
ATGGTGAAATGACGAGTGGT+AGG + chr8_1:74900953-74900972 None:intergenic 45.0%
TTGGATGGTGAAATGACGAG+TGG + chr8_1:74900957-74900976 None:intergenic 45.0%
GTAGAGTGAAAGAGGGTCAT+CGG + chr8_1:74900993-74901012 None:intergenic 45.0%
TGGAGAGGTAGAGTGAAAGA+GGG + chr8_1:74901000-74901019 None:intergenic 45.0%
GCCGGAGATGAAAATCTCTT+CGG + chr8_1:74901133-74901152 None:intergenic 45.0%
GCTAAACGATCACAATCTGC+AGG - chr8_1:74901157-74901176 Msa1214350:CDS 45.0%
TCACAATCTGCAGGGAAGTT+TGG - chr8_1:74901166-74901185 Msa1214350:CDS 45.0%
CAAACTCGGAACCACACATT+TGG + chr8_1:74901260-74901279 None:intergenic 45.0%
CAAATGTGTGGTTCCGAGTT+TGG - chr8_1:74901258-74901277 Msa1214350:CDS 45.0%
TCTCGAGCAGAAACCAAACT+CGG + chr8_1:74901274-74901293 None:intergenic 45.0%
TTTCTGCTCGAGAGGACAAT+CGG - chr8_1:74901281-74901300 Msa1214350:CDS 45.0%
AGGACAATCGGAAGGTTTCA+CGG - chr8_1:74901293-74901312 Msa1214350:CDS 45.0%
CCTCGACGGAACAATAATTG+CGG + chr8_1:74901323-74901342 None:intergenic 45.0%
GGAGAAATGGAAGCTCTTCT+AGG + chr8_1:74901394-74901413 None:intergenic 45.0%
AGAAGAGCTTCCATTTCTCC+GGG - chr8_1:74901394-74901413 Msa1214350:intron 45.0%
CGAAGAAGAAGATGGTAGCT+GGG - chr8_1:74901470-74901489 Msa1214350:intron 45.0%
TTCATCCCAATTCTTCCTCG+CGG + chr8_1:74901536-74901555 None:intergenic 45.0%
TTTGGCAGGTTGCAATGACA+AGG - chr8_1:74901783-74901802 Msa1214350:intron 45.0%
CTGTGTCTGGCAAACTTTCA+AGG - chr8_1:74901984-74902003 Msa1214350:intron 45.0%
TCTGGCAAACTTTCAAGGCT+TGG - chr8_1:74901989-74902008 Msa1214350:CDS 45.0%
!!! CACGCTGCAATTTTTAGTGG+TGG + chr8_1:74902103-74902122 None:intergenic 45.0%
GAACTGAATCCAGGATGCAA+TGG - chr8_1:74902318-74902337 Msa1214350:intron 45.0%
GAATCCAGGATGCAATGGAA+AGG - chr8_1:74902323-74902342 Msa1214350:intron 45.0%
CTTTCCTTTCCATTGCATCC+TGG + chr8_1:74902330-74902349 None:intergenic 45.0%
GTCTGAAAACATGCTGAAGC+AGG + chr8_1:74902632-74902651 None:intergenic 45.0%
! TGGCTTTACACACAGAGCAA+AGG + chr8_1:74902654-74902673 None:intergenic 45.0%
TGTCCTAAGATCAATCGCAC+TGG - chr8_1:74902720-74902739 Msa1214350:CDS 45.0%
AGCTTCAACCCAAAGAGAGA+TGG + chr8_1:74902800-74902819 None:intergenic 45.0%
!! TCTTTGGGTTGAAGCTGCTT+TGG - chr8_1:74902804-74902823 Msa1214350:CDS 45.0%
GTTGAAGAATCCCTTGAAGC+AGG - chr8_1:74903012-74903031 Msa1214350:CDS 45.0%
!! AAGAAAGCATTGCCTCTGGA+TGG - chr8_1:74903069-74903088 Msa1214350:CDS 45.0%
GAAGCGAGTAAATGCATGGT+TGG - chr8_1:74903122-74903141 Msa1214350:CDS 45.0%
! GATTCCCTTTAGAAACCACG+CGG + chr8_1:74903149-74903168 None:intergenic 45.0%
! TGTCGGTGTTCATTGCTTGG+AGG + chr8_1:74900619-74900638 None:intergenic 50.0%
! GTGTGTCGGTGTTCATTGCT+TGG + chr8_1:74900622-74900641 None:intergenic 50.0%
CGGGTACAATTCCGATGAGT+TGG + chr8_1:74900676-74900695 None:intergenic 50.0%
AGATCGGAGCTGGATAAAGC+GGG + chr8_1:74900695-74900714 None:intergenic 50.0%
GAGATCGGAGCTGGATAAAG+CGG + chr8_1:74900696-74900715 None:intergenic 50.0%
TCCGATCTCTTCTCCAACGA+AGG - chr8_1:74900707-74900726 Msa1214350:three_prime_UTR 50.0%
GCCTTCGTTGGAGAAGAGAT+CGG + chr8_1:74900711-74900730 None:intergenic 50.0%
GTGAGAGAGAAGAACGTAGG+TGG + chr8_1:74900765-74900784 None:intergenic 50.0%
AGGGTGAGAGAGAAGAACGT+AGG + chr8_1:74900768-74900787 None:intergenic 50.0%
AGCGATCAACGTAGAGGAAC+TGG + chr8_1:74900829-74900848 None:intergenic 50.0%
!! GTTGGTGACAGAAGGAAGAG+GGG + chr8_1:74900864-74900883 None:intergenic 50.0%
!! GGACGAATGTTGGTGACAGA+AGG + chr8_1:74900872-74900891 None:intergenic 50.0%
ATACGAGCTACGAGTGGTTC+CGG + chr8_1:74900926-74900945 None:intergenic 50.0%
GGTGAAATACGAGCTACGAG+TGG + chr8_1:74900932-74900951 None:intergenic 50.0%
! GGAATCCGATAACGGTTGGA+TGG + chr8_1:74900972-74900991 None:intergenic 50.0%
! CATCGGAATCCGATAACGGT+TGG + chr8_1:74900976-74900995 None:intergenic 50.0%
GGGTCATCGGAATCCGATAA+CGG + chr8_1:74900980-74900999 None:intergenic 50.0%
GTGGAGAGGTAGAGTGAAAG+AGG + chr8_1:74901001-74901020 None:intergenic 50.0%
TTGAATCGGAGATTGTGCGG+TGG + chr8_1:74901032-74901051 None:intergenic 50.0%
TGTGATCGTTTAGCAGTCGC+CGG + chr8_1:74901151-74901170 None:intergenic 50.0%
TGCTGAGAGAGATCCATCTC+CGG - chr8_1:74901198-74901217 Msa1214350:CDS 50.0%
ACCAGTACCGTCCAAATGTG+TGG - chr8_1:74901246-74901265 Msa1214350:CDS 50.0%
ACCACACATTTGGACGGTAC+TGG + chr8_1:74901250-74901269 None:intergenic 50.0%
CTCGGAACCACACATTTGGA+CGG + chr8_1:74901256-74901275 None:intergenic 50.0%
! GAGTTTGGTTTCTGCTCGAG+AGG - chr8_1:74901273-74901292 Msa1214350:CDS 50.0%
GGACAATCGGAAGGTTTCAC+GGG - chr8_1:74901294-74901313 Msa1214350:CDS 50.0%
CCGCAATTATTGTTCCGTCG+AGG - chr8_1:74901320-74901339 Msa1214350:CDS 50.0%
GAAGAGCTTCCATTTCTCCG+GGG - chr8_1:74901395-74901414 Msa1214350:intron 50.0%
CAATCTTCTCCCCGGAGAAA+TGG + chr8_1:74901407-74901426 None:intergenic 50.0%
CGGCGAAAACTTGATTCCAC+CGG + chr8_1:74901431-74901450 None:intergenic 50.0%
! CGGTGGAATCAAGTTTTCGC+CGG - chr8_1:74901429-74901448 Msa1214350:intron 50.0%
!! ATCAAGTTTTCGCCGGCTGT+TGG - chr8_1:74901436-74901455 Msa1214350:intron 50.0%
GCAGTAGAATCTCCAACAGC+CGG + chr8_1:74901451-74901470 None:intergenic 50.0%
GCGAAGAAGAAGATGGTAGC+TGG - chr8_1:74901469-74901488 Msa1214350:intron 50.0%
GAAGACCGCGAGGAAGAATT+GGG - chr8_1:74901528-74901547 Msa1214350:intron 50.0%
TCCAAGTTTGCAGGTCTTGG+TGG - chr8_1:74901911-74901930 Msa1214350:intron 50.0%
GTTCCTCTTGATGCTGTGTC+TGG - chr8_1:74901971-74901990 Msa1214350:intron 50.0%
TTGCCAGACACAGCATCAAG+AGG + chr8_1:74901977-74901996 None:intergenic 50.0%
TGCTGCTGCAGCATTAGAAG+AGG - chr8_1:74902366-74902385 Msa1214350:intron 50.0%
CAGCCAGTGCGATTGATCTT+AGG + chr8_1:74902726-74902745 None:intergenic 50.0%
!! GTGTTTGGAGAGAGTGCTAG+TGG - chr8_1:74903042-74903061 Msa1214350:CDS 50.0%
!! TTTGGAGAGAGTGCTAGTGG+TGG - chr8_1:74903045-74903064 Msa1214350:CDS 50.0%
!! TTGGAGAGAGTGCTAGTGGT+GGG - chr8_1:74903046-74903065 Msa1214350:CDS 50.0%
!! TGGGAAGAAAGCATTGCCTC+TGG - chr8_1:74903065-74903084 Msa1214350:CDS 50.0%
!! AAAGCATTGCCTCTGGATGG+TGG - chr8_1:74903072-74903091 Msa1214350:CDS 50.0%
TTGGACCGCGTGGTTTCTAA+AGG - chr8_1:74903141-74903160 Msa1214350:CDS 50.0%
TGGACCGCGTGGTTTCTAAA+GGG - chr8_1:74903142-74903161 Msa1214350:CDS 50.0%
AACACCGACACACGTGTCAC+CGG - chr8_1:74900629-74900648 Msa1214350:three_prime_UTR 55.0%
GTTGGAGAAGAGGAGAACGG+TGG + chr8_1:74900658-74900677 None:intergenic 55.0%
GTTGGAGAAGAGATCGGAGC+TGG + chr8_1:74900705-74900724 None:intergenic 55.0%
TGACAGAAGGAAGAGGGGTG+TGG + chr8_1:74900859-74900878 None:intergenic 55.0%
AGATTGTGCGGTGGTCGTGT+TGG + chr8_1:74901023-74901042 None:intergenic 55.0%
TGAGAGAGATCCATCTCCGG+CGG - chr8_1:74901201-74901220 Msa1214350:CDS 55.0%
GATCTCTTCATCTTCCCCGC+CGG + chr8_1:74901220-74901239 None:intergenic 55.0%
TGCTCGAGAGGACAATCGGA+AGG - chr8_1:74901285-74901304 Msa1214350:CDS 55.0%
GACGGCTGTCTATACCTCGA+CGG + chr8_1:74901337-74901356 None:intergenic 55.0%
!! GCTCTTCTAGGATTCGGCGA+AGG + chr8_1:74901382-74901401 None:intergenic 55.0%
TCTCCGGGGAGAAGATTGTC+CGG - chr8_1:74901409-74901428 Msa1214350:intron 55.0%
CGAAGACCGCGAGGAAGAAT+TGG - chr8_1:74901527-74901546 Msa1214350:intron 55.0%
GCCACCAAGACCTGCAAACT+TGG + chr8_1:74901915-74901934 None:intergenic 55.0%
AAATGCATGGTTGGACCGCG+TGG - chr8_1:74903131-74903150 Msa1214350:CDS 55.0%
AAGAGGAGAACGGTGGTCGC+CGG + chr8_1:74900651-74900670 None:intergenic 60.0%
CGTGGGGAGAGGACGAATGT+TGG + chr8_1:74900882-74900901 None:intergenic 60.0%
TTGTGCGGTGGTCGTGTTGG+TGG + chr8_1:74901020-74901039 None:intergenic 60.0%
GAGAGAGATCCATCTCCGGC+GGG - chr8_1:74901202-74901221 Msa1214350:CDS 60.0%
AGAGAGATCCATCTCCGGCG+GGG - chr8_1:74901203-74901222 Msa1214350:CDS 60.0%
TTCATCTTCCCCGCCGGAGA+TGG + chr8_1:74901214-74901233 None:intergenic 60.0%
TAGACAGCCGTCTCCGACGA+CGG - chr8_1:74901345-74901364 Msa1214350:CDS 60.0%
TTCCTTGCCGTCGTCGGAGA+CGG + chr8_1:74901355-74901374 None:intergenic 60.0%
CCACCGGACAATCTTCTCCC+CGG + chr8_1:74901415-74901434 None:intergenic 60.0%
GCAATGGAGCCACCATCCAG+AGG + chr8_1:74903084-74903103 None:intergenic 60.0%
GTCGCCGGTGACACGTGTGT+CGG + chr8_1:74900636-74900655 None:intergenic 65.0%
GTTCCGGCGTTCCGACGAAG+GGG + chr8_1:74900910-74900929 None:intergenic 65.0%
GGTTCCGGCGTTCCGACGAA+GGG + chr8_1:74900911-74900930 None:intergenic 65.0%
TGGTTCCGGCGTTCCGACGA+AGG + chr8_1:74900912-74900931 None:intergenic 65.0%
! CGGTGGTCGTGTTGGTGGAG+AGG + chr8_1:74901015-74901034 None:intergenic 65.0%
GGCTGCTTCCTTGCCGTCGT+CGG + chr8_1:74901361-74901380 None:intergenic 65.0%
CCGGGGAGAAGATTGTCCGG+TGG - chr8_1:74901412-74901431 Msa1214350:intron 65.0%
CCACCCCTTCGTCGGAACGC+CGG - chr8_1:74900904-74900923 Msa1214350:CDS 70.0%
AGCCGTCTCCGACGACGGCA+AGG - chr8_1:74901350-74901369 Msa1214350:intron 70.0%
CTGGATCGGCGAAGACCGCG+AGG - chr8_1:74901518-74901537 Msa1214350:intron 70.0%
AAGGGGTGGCGCGTGGGGAG+AGG + chr8_1:74900893-74900912 None:intergenic 75.0%
CGACGAAGGGGTGGCGCGTG+GGG + chr8_1:74900898-74900917 None:intergenic 75.0%
CCGACGAAGGGGTGGCGCGT+GGG + chr8_1:74900899-74900918 None:intergenic 75.0%
CCCACGCGCCACCCCTTCGT+CGG - chr8_1:74900896-74900915 Msa1214350:CDS 75.0%
TCCGACGAAGGGGTGGCGCG+TGG + chr8_1:74900900-74900919 None:intergenic 75.0%
CCGGCGTTCCGACGAAGGGG+TGG + chr8_1:74900907-74900926 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 74900505 74903498 74900505 ID=Msa1214350;Name=Msa1214350
chr8_1 mRNA 74900505 74903498 74900505 ID=Msa1214350-mRNA-1;Parent=Msa1214350;Name=Msa1214350-mRNA-1;_AED=0.00;_eAED=0.00;_QI=76|1|1|1|1|1|4|223|669
chr8_1 exon 74900505 74901364 74900505 ID=Msa1214350-mRNA-1:exon:25729;Parent=Msa1214350-mRNA-1
chr8_1 exon 74901581 74901672 74901581 ID=Msa1214350-mRNA-1:exon:25728;Parent=Msa1214350-mRNA-1
chr8_1 exon 74901988 74902212 74901988 ID=Msa1214350-mRNA-1:exon:25727;Parent=Msa1214350-mRNA-1
chr8_1 exon 74902367 74903498 74902367 ID=Msa1214350-mRNA-1:exon:25726;Parent=Msa1214350-mRNA-1
chr8_1 five_prime_UTR 74903423 74903498 74903423 ID=Msa1214350-mRNA-1:five_prime_utr;Parent=Msa1214350-mRNA-1
chr8_1 CDS 74902367 74903422 74902367 ID=Msa1214350-mRNA-1:cds;Parent=Msa1214350-mRNA-1
chr8_1 CDS 74901988 74902212 74901988 ID=Msa1214350-mRNA-1:cds;Parent=Msa1214350-mRNA-1
chr8_1 CDS 74901581 74901672 74901581 ID=Msa1214350-mRNA-1:cds;Parent=Msa1214350-mRNA-1
chr8_1 CDS 74900728 74901364 74900728 ID=Msa1214350-mRNA-1:cds;Parent=Msa1214350-mRNA-1
chr8_1 three_prime_UTR 74900505 74900727 74900505 ID=Msa1214350-mRNA-1:three_prime_utr;Parent=Msa1214350-mRNA-1
Gene Sequence

>Msa1214350

ATGGCTTCACTAACACCAGGCCTAATCCTTAAACTCCTCCAAGCAATGAACACCGACACACGTGTCACCGGCGACCACCGTTCTCCTCTTCTCCAACTCATCGGAATTGTACCCGCTTTATCCAGCTCCGATCTCTTCTCCAACGAAGGCTTCTTTCTCAACCTCTCTGATTCTCTCAACTCCACCTACGTTCTTCTCTCTCACCCTGACACCGATCTCATTCTCAATAATCGTCTTCAATTAGGCCAGTTCCTCTACGTTGATCGCTTTCATTTCCACACCCCTCTTCCTTCTGTCACCAACATTCGTCCTCTCCCCACGCGCCACCCCTTCGTCGGAACGCCGGAACCACTCGTAGCTCGTATTTCACCTACCACTCGTCATTTCACCATCCAACCGTTATCGGATTCCGATGACCCTCTTTCACTCTACCTCTCCACCAACACGACCACCGCACAATCTCCGATTCAAAACAATCAACAACAGCAACAGAAGATGAGCAATGTTCATTCACGGCAACCACTTGCTCCACGAGATAATTTACCAACTCCGAAGAGATTTTCATCTCCGGCGACTGCTAAACGATCACAATCTGCAGGGAAGTTTGGTAAAGTTTCTGCTGAGAGAGATCCATCTCCGGCGGGGAAGATGAAGAGATCTTCTTCACCAGTACCGTCCAAATGTGTGGTTCCGAGTTTGGTTTCTGCTCGAGAGGACAATCGGAAGGTTTCACGGGAAGCCGCAATTATTGTTCCGTCGAGGTATAGACAGCCGTCTCCGACGACGGCAAGGAAGCAGCCTTCGCCGAATCCTAGAAGAGCTTCCATTTCTCCGGGGAGAAGATTGTCCGGTGGAATCAAGTTTTCGCCGGCTGTTGGAGATTCTACTGCGAAGAAGAAGATGGTAGCTGGGATTTCTAAGATTTCTGATATGTTGGCTGGATCGGCGAAGACCGCGAGGAAGAATTGGGATGAACAAAATGTTGAAGGTGAACCTAAAGAAAAGAGTGTTGGTTCTAAAACTAGGGTTGATTCTCAATCAATTTTGAGAACTCAGGTTGCAATGACAAGGAGATTGAGTGATGTGAAAAGCCGAAAATCAGATGACAATGATTCTTCTTCTGTAGATGAGAATACTATAGACTCTTCTCCTCAAAGTTGTTTGGAGGTAGAGAAATCCAAGTTTGCAGGTCTTGGTGGCATTACAATTCATGAAAAGAAATGGACTGATGGAAGTGTTCCTCTTGATGCTGTGTCTGGCAAACTTTCAAGGCTTGGAAAGGATGCAATGGAAAGGAAAGCTCTTGCTTCTGCAGCTGCTGCTGCAGCATTAGAAGAGGCCAATGCTACTGAATGTATAATAAGAAATTTAAGCATGTTTTCAGACCTTTGCTCTGTGTGTAAAGCCAAAAATCCTTTGCCAACCATAGACAAGTTTTTTACCATCTATGATGATGTCCTAAGATCAATCGCACTGGCTGAATCTGTTGCTAATAGTCACGATAACAGTATTCCAACATGTCAATCAAAGTCCATCTCTCTTTGGGTTGAAGCTGCTTTGGCCACTGATCTTCAGATAGTATCCCTTCTTACTGAAAATGACATAGATACTCCATCAGAACTTCAGAAAAGGCTGTCAAGACCACACTCTCTTAGCACATCTAAGAGTCAAGGAAATGGAATGAAAGAAACACTGGAGCTTGGAACAAGTTTACTGTCAGAAATGCAAATGTGGTTTCTACGCTTTGTTGAAGAATCCCTTGAAGCAGGATTTAAAGTGTTTGGAGAGAGTGCTAGTGGTGGGAAGAAAGCATTGCCTCTGGATGGTGGCTCCATTGCTATTGTTTTGTCACATTTGAAGCGAGTAAATGCATGGTTGGACCGCGTGGTTTCTAAAGGGAATCACTCATTGACAGATAAGATTGAGAAATTAAAGAGAAAAATCTATGGTTTTGTTATCCAGCATGTAGGATCAACTTTTGATAACAAAGCTTCCCCTGCTTCATCCTGA

Protein sequence

>Msa1214350

MASLTPGLILKLLQAMNTDTRVTGDHRSPLLQLIGIVPALSSSDLFSNEGFFLNLSDSLNSTYVLLSHPDTDLILNNRLQLGQFLYVDRFHFHTPLPSVTNIRPLPTRHPFVGTPEPLVARISPTTRHFTIQPLSDSDDPLSLYLSTNTTTAQSPIQNNQQQQQKMSNVHSRQPLAPRDNLPTPKRFSSPATAKRSQSAGKFGKVSAERDPSPAGKMKRSSSPVPSKCVVPSLVSAREDNRKVSREAAIIVPSRYRQPSPTTARKQPSPNPRRASISPGRRLSGGIKFSPAVGDSTAKKKMVAGISKISDMLAGSAKTARKNWDEQNVEGEPKEKSVGSKTRVDSQSILRTQVAMTRRLSDVKSRKSDDNDSSSVDENTIDSSPQSCLEVEKSKFAGLGGITIHEKKWTDGSVPLDAVSGKLSRLGKDAMERKALASAAAAAALEEANATECIIRNLSMFSDLCSVCKAKNPLPTIDKFFTIYDDVLRSIALAESVANSHDNSIPTCQSKSISLWVEAALATDLQIVSLLTENDIDTPSELQKRLSRPHSLSTSKSQGNGMKETLELGTSLLSEMQMWFLRFVEESLEAGFKVFGESASGGKKALPLDGGSIAIVLSHLKRVNAWLDRVVSKGNHSLTDKIEKLKRKIYGFVIQHVGSTFDNKASPASS*