Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0049650 | Msa0785740 | -0.816966 | 4.211388e-52 | -8.615850e-47 |
| Msa0074950 | Msa0785740 | -0.819032 | 1.436624e-52 | -8.615850e-47 |
| Msa0106370 | Msa0785740 | -0.819288 | 1.256458e-52 | -8.615850e-47 |
| Msa0625530 | Msa0785740 | -0.812486 | 4.138861e-51 | -8.615850e-47 |
| Msa0657670 | Msa0785740 | 0.810382 | 1.184916e-50 | -8.615850e-47 |
| Msa0785740 | Msa0867050 | -0.822762 | 1.991867e-53 | -8.615850e-47 |
| Msa0785740 | Msa1038050 | 0.803270 | 3.776234e-49 | -8.615850e-47 |
| Msa0785740 | Msa1040120 | 0.824459 | 7.978459e-54 | -8.615850e-47 |
| Msa0785740 | Msa1128160 | 0.833694 | 4.603918e-56 | -8.615850e-47 |
| Msa0785740 | Msa1129560 | 0.808324 | 3.276215e-50 | -8.615850e-47 |
| Msa0785740 | Msa1165360 | 0.833425 | 5.371457e-56 | -8.615850e-47 |
| Msa0785740 | Msa1200880 | -0.818238 | 2.175952e-52 | -8.615850e-47 |
| Msa0785740 | Msa1253930 | -0.825696 | 4.071519e-54 | -8.615850e-47 |
| Msa0785740 | Msa1271280 | 0.831333 | 1.771877e-55 | -8.615850e-47 |
| Msa0785740 | Msa1307660 | -0.827971 | 1.165116e-54 | -8.615850e-47 |
| Msa0785740 | Msa1395230 | -0.837007 | 6.698715e-57 | -8.615850e-47 |
| Msa0785740 | Msa1410430 | -0.822253 | 2.615285e-53 | -8.615850e-47 |
| Msa0215830 | Msa0785740 | 0.800065 | 1.716613e-48 | -8.615850e-47 |
| Msa0222920 | Msa0785740 | 0.812553 | 4.002112e-51 | -8.615850e-47 |
| Msa0414950 | Msa0785740 | -0.828165 | 1.046320e-54 | -8.615850e-47 |
| Msa0459770 | Msa0785740 | -0.826762 | 2.270913e-54 | -8.615850e-47 |
| Msa0264350 | Msa0785740 | 0.817003 | 4.129898e-52 | -8.615850e-47 |
| Msa0275670 | Msa0785740 | 0.807967 | 3.902505e-50 | -8.615850e-47 |
| Msa0312690 | Msa0785740 | -0.805799 | 1.121028e-49 | -8.615850e-47 |
| Msa0318250 | Msa0785740 | 0.814385 | 1.582933e-51 | -8.615850e-47 |
| Msa0577940 | Msa0785740 | -0.814652 | 1.381456e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 76 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCCAACATCTTATATTTA+TGG | 0.162666 | 5_2:+70891306 | None:intergenic |
| TTAAGATGGACACATAATTT+TGG | 0.181587 | 5_2:+70891357 | None:intergenic |
| CTTCTTCTTCTCCTCCTCTT+TGG | 0.221960 | 5_2:+70891526 | None:intergenic |
| CATAATTTGTTTGACCTTCA+TGG | 0.235938 | 5_2:+70892811 | None:intergenic |
| AAGAGTCTAACAAATGTTTA+TGG | 0.244028 | 5_2:+70891128 | Msa0785730:CDS |
| TGAAAGACAACGAGGTATTT+TGG | 0.250662 | 5_2:+70895797 | None:intergenic |
| AAACATTTGTTAGACTCTTT+AGG | 0.304968 | 5_2:-70891124 | Msa0785740:three_prime_UTR |
| CCCACAACATCCTTCATGTT+TGG | 0.337403 | 5_2:-70895946 | Msa0785740:CDS |
| GGAGATTCAGTTGATTTGTC+TGG | 0.347598 | 5_2:-70893331 | Msa0785740:three_prime_UTR |
| GAAGACTTCCCTGTTGTTGA+TGG | 0.352846 | 5_2:-70893247 | Msa0785740:intron |
| GCGCTACCATATGCATATTC+TGG | 0.357517 | 5_2:+70892692 | None:intergenic |
| ACTATATTCTCCTTTGAAGT+TGG | 0.358251 | 5_2:-70892875 | Msa0785740:three_prime_UTR |
| CACAACTTAATTAAATGCTT+AGG | 0.369941 | 5_2:-70891187 | Msa0785740:three_prime_UTR |
| CTGAAACAAATCGGGTTAAA+CGG | 0.378531 | 5_2:+70895764 | None:intergenic |
| ATCGGGTTAAACGGGTAAAC+GGG | 0.388497 | 5_2:+70895773 | None:intergenic |
| CCACGTAAGGGCTCCACTAC+TGG | 0.388590 | 5_2:-70892327 | Msa0785740:three_prime_UTR |
| AATCGGGTTAAACGGGTAAA+CGG | 0.401795 | 5_2:+70895772 | None:intergenic |
| ATACCAACAATTATTTAAGA+TGG | 0.419769 | 5_2:+70891343 | None:intergenic |
| ACAACATATATGCATGTCAT+AGG | 0.421300 | 5_2:+70891081 | Msa0785730:intron |
| ACAACTTAATTAAATGCTTA+GGG | 0.423685 | 5_2:-70891186 | Msa0785740:three_prime_UTR |
| AAGGTCATGGAAAGGGTAAA+GGG | 0.426828 | 5_2:-70891445 | Msa0785740:three_prime_UTR |
| AAGAAGCTTCTGAAACAAAT+CGG | 0.427967 | 5_2:+70895755 | None:intergenic |
| TTCCATAAATATAAGATGTT+GGG | 0.431330 | 5_2:-70891308 | Msa0785740:three_prime_UTR |
| TGAAACAAATCGGGTTAAAC+GGG | 0.433843 | 5_2:+70895765 | None:intergenic |
| TGTCCATCTTAAATAATTGT+TGG | 0.441765 | 5_2:-70891346 | Msa0785740:three_prime_UTR |
| AAGTTGTGGTGAGCCATACT+TGG | 0.448422 | 5_2:+70891202 | None:intergenic |
| TGGAAAAGGCAGTGTTATCA+AGG | 0.453828 | 5_2:-70892855 | Msa0785740:three_prime_UTR |
| ACAGGTTCATCGGACGCATA+TGG | 0.462902 | 5_2:-70895833 | Msa0785740:intron |
| CTTCCATAAATATAAGATGT+TGG | 0.473733 | 5_2:-70891309 | Msa0785740:three_prime_UTR |
| GAGATTCAGTTGATTTGTCT+GGG | 0.473742 | 5_2:-70893330 | Msa0785740:three_prime_UTR |
| TTCTCCTTTGAAGTTGGAAA+AGG | 0.475308 | 5_2:-70892869 | Msa0785740:three_prime_UTR |
| GAAAGCATACCATCAACAAC+AGG | 0.475518 | 5_2:+70893238 | None:intergenic |
| AAAGGTCATGGAAAGGGTAA+AGG | 0.480581 | 5_2:-70891446 | Msa0785740:three_prime_UTR |
| AGGCAGTGTTATCAAGGCTT+GGG | 0.482839 | 5_2:-70892849 | Msa0785740:three_prime_UTR |
| GTGTTTCTGAGGAGAGGGCT+AGG | 0.483992 | 5_2:-70892302 | Msa0785740:three_prime_UTR |
| AAGGCAGTGTTATCAAGGCT+TGG | 0.496931 | 5_2:-70892850 | Msa0785740:three_prime_UTR |
| GGGTAAAGGGAAAGCAAAGT+AGG | 0.504881 | 5_2:-70891432 | Msa0785740:three_prime_UTR |
| TGCAAGCCAGAATATGCATA+TGG | 0.510797 | 5_2:-70892698 | Msa0785740:three_prime_UTR |
| TCAGTTGATTTGTCTGGGGA+TGG | 0.518904 | 5_2:-70893325 | Msa0785740:three_prime_UTR |
| CCAAACATGAAGGATGTTGT+GGG | 0.519253 | 5_2:+70895946 | None:intergenic |
| TCCAAACATGAAGGATGTTG+TGG | 0.520436 | 5_2:+70895945 | None:intergenic |
| CTCAGAAACACTTCCAGTAG+TGG | 0.521912 | 5_2:+70892314 | None:intergenic |
| TTCCAATCAGTACACTATGA+AGG | 0.522727 | 5_2:-70892947 | Msa0785740:intron |
| GAAGGCACACTCGCTGATAC+CGG | 0.525215 | 5_2:-70892929 | Msa0785740:three_prime_UTR |
| AGAAGCTTCTGAAACAAATC+GGG | 0.534395 | 5_2:+70895756 | None:intergenic |
| CTAAGCATTTAATTAAGTTG+TGG | 0.535703 | 5_2:+70891188 | None:intergenic |
| AGATGTTGGGTAGCTTGCTA+TGG | 0.536074 | 5_2:-70891295 | Msa0785740:three_prime_UTR |
| GTTGATTTGTCTGGGGATGG+TGG | 0.553043 | 5_2:-70893322 | Msa0785740:three_prime_UTR |
| GAATATGCATATGGTAGCGC+AGG | 0.553522 | 5_2:-70892689 | Msa0785740:three_prime_UTR |
| TGGAAGTGTTTCTGAGGAGA+GGG | 0.562027 | 5_2:-70892307 | Msa0785740:three_prime_UTR |
| AGTTGCGTGTAGGCCACGTA+AGG | 0.565059 | 5_2:-70892340 | Msa0785740:three_prime_UTR |
| AGTTGTGGTGAGCCATACTT+GGG | 0.569262 | 5_2:+70891203 | None:intergenic |
| TGCTGCTGCAGCCAAAGAGG+AGG | 0.570227 | 5_2:-70891537 | Msa0785740:three_prime_UTR |
| GATTGCTGCTGCAGCCAAAG+AGG | 0.571392 | 5_2:-70891540 | Msa0785740:three_prime_UTR |
| AAGTTGAGCTAGTTGCGTGT+AGG | 0.580977 | 5_2:-70892350 | Msa0785740:three_prime_UTR |
| ACAACAGGGAAGTCTTCTGT+TGG | 0.581288 | 5_2:+70893253 | None:intergenic |
| TTTCTGAGAAACAGGTTCAT+CGG | 0.581931 | 5_2:-70895843 | Msa0785740:intron |
| CTGGAAGTGTTTCTGAGGAG+AGG | 0.599142 | 5_2:-70892308 | Msa0785740:three_prime_UTR |
| CACTACTGGAAGTGTTTCTG+AGG | 0.602284 | 5_2:-70892313 | Msa0785740:three_prime_UTR |
| CGTAGTGTCAAAGACTTCAC+CGG | 0.604640 | 5_2:+70892910 | None:intergenic |
| GGTAAAGGGAAAGCAAAGTA+GGG | 0.606494 | 5_2:-70891431 | Msa0785740:three_prime_UTR |
| GAAGAGCAAGTCAGATGCTG+TGG | 0.610450 | 5_2:-70893278 | Msa0785740:three_prime_UTR |
| AAATGAGATAAGTACTCTGG+GGG | 0.613016 | 5_2:+70892650 | None:intergenic |
| CAAATCAACTGAATCTCCCA+TGG | 0.615745 | 5_2:+70893336 | None:intergenic |
| CCAGTAGTGGAGCCCTTACG+TGG | 0.617393 | 5_2:+70892327 | None:intergenic |
| TGACTTGCTCTTCCTCACAA+TGG | 0.623766 | 5_2:+70893288 | None:intergenic |
| AGATTCAGTTGATTTGTCTG+GGG | 0.625339 | 5_2:-70893329 | Msa0785740:three_prime_UTR |
| GCTATACGCTCCAAACATGA+AGG | 0.626634 | 5_2:+70895936 | None:intergenic |
| CATTGCAGTCAAAACCATGA+AGG | 0.637732 | 5_2:-70892825 | Msa0785740:intron |
| GTTGCGTGTAGGCCACGTAA+GGG | 0.658194 | 5_2:-70892339 | Msa0785740:three_prime_UTR |
| CAAACATGAAGGATGTTGTG+GGG | 0.683239 | 5_2:+70895947 | None:intergenic |
| GAGTCATCAAGACCATTGTG+AGG | 0.706792 | 5_2:-70893300 | Msa0785740:three_prime_UTR |
| AAAGCATACCATCAACAACA+GGG | 0.707413 | 5_2:+70893239 | None:intergenic |
| AATGAGATAAGTACTCTGGG+GGG | 0.751884 | 5_2:+70892651 | None:intergenic |
| TGGAGCGTATAGCACACGCG+TGG | 0.756111 | 5_2:-70895926 | Msa0785740:CDS |
| AAACGGGTTGAAAGACAACG+AGG | 0.824839 | 5_2:+70895789 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTATTA+AGG | - | chr5_2:70894816-70894835 | Msa0785740:intron | 0.0% |
| !!! | ATCTAAAACAATAAAATAAA+GGG | + | chr5_2:70891412-70891431 | None:intergenic | 10.0% |
| !!! | AATCTAAAACAATAAAATAA+AGG | + | chr5_2:70891413-70891432 | None:intergenic | 10.0% |
| !!! | TTTTTAAGTTTATGAATGTT+GGG | - | chr5_2:70891499-70891518 | Msa0785740:three_prime_UTR | 15.0% |
| !! | TAATTACAAAATCCTAAATA+TGG | + | chr5_2:70891899-70891918 | None:intergenic | 15.0% |
| !! | AGAAGATAAAAACATAAAAA+TGG | + | chr5_2:70891988-70892007 | None:intergenic | 15.0% |
| !! | ACATAAAAAACAATTTATTG+TGG | - | chr5_2:70892550-70892569 | Msa0785740:intron | 15.0% |
| !! | ATTACATTATATCAATCAAA+AGG | + | chr5_2:70892748-70892767 | None:intergenic | 15.0% |
| !! | ACATAGTATTAAAATATGTT+TGG | - | chr5_2:70893503-70893522 | Msa0785740:intron | 15.0% |
| !! | AACTTGAATCATTTAAATAA+TGG | - | chr5_2:70894280-70894299 | Msa0785740:intron | 15.0% |
| !! | AAAAAAAAAAAAAACGTGAT+TGG | + | chr5_2:70894810-70894829 | None:intergenic | 15.0% |
| !!! | TATTAAAAAGTTTTTCTGTT+TGG | - | chr5_2:70895423-70895442 | Msa0785740:intron | 15.0% |
| !!! | TTTCAGCTATATTTTAATTT+TGG | - | chr5_2:70895821-70895840 | Msa0785740:CDS | 15.0% |
| !!! | CTTTTTAAGTTTATGAATGT+TGG | - | chr5_2:70891498-70891517 | Msa0785740:three_prime_UTR | 20.0% |
| !! | TAAAAACATAAAAATGGATC+AGG | + | chr5_2:70891982-70892001 | None:intergenic | 20.0% |
| !!! | TAATGTTTTTGAGTAAAATG+TGG | - | chr5_2:70892143-70892162 | Msa0785740:intron | 20.0% |
| !!! | GTAATTTATTTGTCATGTTT+TGG | - | chr5_2:70892653-70892672 | Msa0785740:intron | 20.0% |
| !! | AAAAAACATAAAAATGGATC+AGG | + | chr5_2:70892695-70892714 | None:intergenic | 20.0% |
| !!! | TTTTAATTGCATGAACTTAA+AGG | - | chr5_2:70892715-70892734 | Msa0785740:three_prime_UTR | 20.0% |
| !! | TTTAATTGCATGAACTTAAA+GGG | - | chr5_2:70892716-70892735 | Msa0785740:three_prime_UTR | 20.0% |
| !!! | AAGTGTTTTTGAGTAAAATT+GGG | - | chr5_2:70892855-70892874 | Msa0785740:three_prime_UTR | 20.0% |
| !! | AATTACTAAAGATGGAAAAA+TGG | + | chr5_2:70893271-70893290 | None:intergenic | 20.0% |
| !! | ATGTTCAAAATTACTAAAGA+TGG | + | chr5_2:70893279-70893298 | None:intergenic | 20.0% |
| !!! | TTAACTTGTTATTCTCTTTT+TGG | - | chr5_2:70893326-70893345 | Msa0785740:three_prime_UTR | 20.0% |
| !!! | TAACTTGTTATTCTCTTTTT+GGG | - | chr5_2:70893327-70893346 | Msa0785740:three_prime_UTR | 20.0% |
| !! | TTATTTATGAACCTAAAAAG+TGG | - | chr5_2:70893981-70894000 | Msa0785740:intron | 20.0% |
| !!! | TTGATAATTAATTGCCTTTT+TGG | + | chr5_2:70894477-70894496 | None:intergenic | 20.0% |
| !! | AATATGCTAATATAAGTTCA+GGG | - | chr5_2:70894535-70894554 | Msa0785740:intron | 20.0% |
| !! | TACTAAGAAAACCTTATATT+AGG | + | chr5_2:70894598-70894617 | None:intergenic | 20.0% |
| !!! | TTATTGTTTTTAGTCAATGA+AGG | - | chr5_2:70894847-70894866 | Msa0785740:intron | 20.0% |
| !!! | TGTTTAATTTGTGTTCTTTT+CGG | + | chr5_2:70895253-70895272 | None:intergenic | 20.0% |
| !! | ATACCAACAATTATTTAAGA+TGG | + | chr5_2:70895719-70895738 | None:intergenic | 20.0% |
| !! | TTCCATAAATATAAGATGTT+GGG | - | chr5_2:70895751-70895770 | Msa0785740:CDS | 20.0% |
| !! | ACAACTTAATTAAATGCTTA+GGG | - | chr5_2:70895873-70895892 | Msa0785740:intron | 20.0% |
| ! | TAAGAATAGAAGAATCCAAA+GGG | + | chr5_2:70891182-70891201 | None:intergenic | 25.0% |
| ! | TTAAGAATAGAAGAATCCAA+AGG | + | chr5_2:70891183-70891202 | None:intergenic | 25.0% |
| !!! | ATTTTGATTTTGTGTTGTGA+TGG | - | chr5_2:70891591-70891610 | Msa0785740:intron | 25.0% |
| !!! | TTTTGATTTTGTGTTGTGAT+GGG | - | chr5_2:70891592-70891611 | Msa0785740:intron | 25.0% |
| !!! | ATCATGATAATGATAATGGA+TGG | - | chr5_2:70891709-70891728 | Msa0785740:intron | 25.0% |
| ! | TGTTGTGATTCTTTATATTG+CGG | - | chr5_2:70891741-70891760 | Msa0785740:intron | 25.0% |
| ! | CAACTCAAATCAAAATCAAT+AGG | + | chr5_2:70892320-70892339 | None:intergenic | 25.0% |
| !!! | ATTGATTTTGATTTGAGTTG+TGG | - | chr5_2:70892320-70892339 | Msa0785740:three_prime_UTR | 25.0% |
| ! | GATACTAAGATTCATAAACT+TGG | + | chr5_2:70892813-70892832 | None:intergenic | 25.0% |
| !!! | CAAGTGTTTTTGAGTAAAAT+TGG | - | chr5_2:70892854-70892873 | Msa0785740:three_prime_UTR | 25.0% |
| ! | AATATGTTTGGATTCTACTA+TGG | - | chr5_2:70893515-70893534 | Msa0785740:intron | 25.0% |
| ! | TAGTAACGAACTATATTATC+CGG | - | chr5_2:70893875-70893894 | Msa0785740:intron | 25.0% |
| ! | CTTTAGATTATAATAGTGAC+CGG | + | chr5_2:70893897-70893916 | None:intergenic | 25.0% |
| ! | TATTCAATGGATCTAAAAAG+TGG | + | chr5_2:70893921-70893940 | None:intergenic | 25.0% |
| ! | TAGAAACGTCATTTATTCAA+TGG | + | chr5_2:70893934-70893953 | None:intergenic | 25.0% |
| ! | TCATAAATAATTGATGCATC+TGG | + | chr5_2:70893971-70893990 | None:intergenic | 25.0% |
| !!! | TCAACAAAAAACCACTTTTT+AGG | + | chr5_2:70893995-70894014 | None:intergenic | 25.0% |
| !!! | TTTTTGTTGATAAGAGTGAT+CGG | - | chr5_2:70894005-70894024 | Msa0785740:intron | 25.0% |
| ! | ATCTCTATTAAAAACTCCAT+AGG | - | chr5_2:70894043-70894062 | Msa0785740:intron | 25.0% |
| ! | AAAATGAAAGAATGCCAAAA+AGG | - | chr5_2:70894460-70894479 | Msa0785740:intron | 25.0% |
| ! | GAATATGCTAATATAAGTTC+AGG | - | chr5_2:70894534-70894553 | Msa0785740:intron | 25.0% |
| ! | ATATGCTAATATAAGTTCAG+GGG | - | chr5_2:70894536-70894555 | Msa0785740:intron | 25.0% |
| !! | ATCTCTAATTGTTACTTGTT+TGG | - | chr5_2:70894658-70894677 | Msa0785740:intron | 25.0% |
| !! | AAAAAGTTTTTCTGTTTGGT+TGG | - | chr5_2:70895427-70895446 | Msa0785740:intron | 25.0% |
| !! | AAAAGTTTTTCTGTTTGGTT+GGG | - | chr5_2:70895428-70895447 | Msa0785740:intron | 25.0% |
| ! | TCACAATTTAAACAACACAT+TGG | + | chr5_2:70895461-70895480 | None:intergenic | 25.0% |
| !! | TTAAGATGGACACATAATTT+TGG | + | chr5_2:70895705-70895724 | None:intergenic | 25.0% |
| ! | TGTCCATCTTAAATAATTGT+TGG | - | chr5_2:70895713-70895732 | Msa0785740:intron | 25.0% |
| ! | CTTCCATAAATATAAGATGT+TGG | - | chr5_2:70895750-70895769 | Msa0785740:CDS | 25.0% |
| ! | TACCCAACATCTTATATTTA+TGG | + | chr5_2:70895756-70895775 | None:intergenic | 25.0% |
| !! | CTAAGCATTTAATTAAGTTG+TGG | + | chr5_2:70895874-70895893 | None:intergenic | 25.0% |
| ! | CACAACTTAATTAAATGCTT+AGG | - | chr5_2:70895872-70895891 | Msa0785740:intron | 25.0% |
| ! | AAGAGTCTAACAAATGTTTA+TGG | + | chr5_2:70895934-70895953 | None:intergenic | 25.0% |
| !! | AAACATTTGTTAGACTCTTT+AGG | - | chr5_2:70895935-70895954 | Msa0785740:CDS | 25.0% |
| AAGAATAGAAGAATCCAAAG+GGG | + | chr5_2:70891181-70891200 | None:intergenic | 30.0% | |
| !! | AAGAAGCTTCTGAAACAAAT+CGG | + | chr5_2:70891307-70891326 | None:intergenic | 30.0% |
| !!! | AAAGTGATGAACCTTGTTTT+TGG | + | chr5_2:70891346-70891365 | None:intergenic | 30.0% |
| AATCAGTTATTCTCGCAAAA+GGG | + | chr5_2:70891450-70891469 | None:intergenic | 30.0% | |
| AAATCAGTTATTCTCGCAAA+AGG | + | chr5_2:70891451-70891470 | None:intergenic | 30.0% | |
| !! | TTTTTGATTGAGGGTGTAAT+GGG | - | chr5_2:70891561-70891580 | Msa0785740:three_prime_UTR | 30.0% |
| ! | AGCGATCATGATAATGATAA+TGG | - | chr5_2:70891705-70891724 | Msa0785740:intron | 30.0% |
| !!! | GTAATTTGTTTGCGATGTTT+TGG | - | chr5_2:70891931-70891950 | Msa0785740:intron | 30.0% |
| ! | AATCCACAACATTGCATTTT+GGG | + | chr5_2:70892285-70892304 | None:intergenic | 30.0% |
| ! | AAATCCACAACATTGCATTT+TGG | + | chr5_2:70892286-70892305 | None:intergenic | 30.0% |
| !!! | ATTTTGATTTGAGTTGTGGT+GGG | - | chr5_2:70892324-70892343 | Msa0785740:three_prime_UTR | 30.0% |
| TTTAAATAGTAGTCCGGTAA+TGG | - | chr5_2:70892435-70892454 | Msa0785740:intron | 30.0% | |
| !! | TATTTGTCATGTTTTGGATC+AGG | - | chr5_2:70892659-70892678 | Msa0785740:intron | 30.0% |
| TGAATGAGTCTACAACATAA+TGG | - | chr5_2:70892912-70892931 | Msa0785740:three_prime_UTR | 30.0% | |
| ! | CTCTCATTTTAGATATGTTC+AGG | + | chr5_2:70892947-70892966 | None:intergenic | 30.0% |
| ! | GAACATATCTAAAATGAGAG+TGG | - | chr5_2:70892947-70892966 | Msa0785740:intron | 30.0% |
| TTTAAAAACCCGAAATGCAA+TGG | - | chr5_2:70892981-70893000 | Msa0785740:intron | 30.0% | |
| ACTAAAGATGGAAAAATGGA+TGG | + | chr5_2:70893267-70893286 | None:intergenic | 30.0% | |
| !! | GTGTTGATGATTTGTGAATT+TGG | - | chr5_2:70893349-70893368 | Msa0785740:intron | 30.0% |
| ! | TGTTATGCTGTATTCTAGTT+TGG | - | chr5_2:70893387-70893406 | Msa0785740:intron | 30.0% |
| TTTACTTGATGCAGGAATTA+TGG | + | chr5_2:70893550-70893569 | None:intergenic | 30.0% | |
| ! | TTTTACAGTGTGTAAACCAT+GGG | - | chr5_2:70893707-70893726 | Msa0785740:intron | 30.0% |
| !! | ACTATATTCTCCTTTGAAGT+TGG | - | chr5_2:70894184-70894203 | Msa0785740:intron | 30.0% |
| !! | CATAATTTGTTTGACCTTCA+TGG | + | chr5_2:70894251-70894270 | None:intergenic | 30.0% |
| TGAAATGAGATAAGTACTCT+GGG | + | chr5_2:70894414-70894433 | None:intergenic | 30.0% | |
| ATGAAATGAGATAAGTACTC+TGG | + | chr5_2:70894415-70894434 | None:intergenic | 30.0% | |
| !! | TTGGTTTGTTGCCTAATATA+AGG | - | chr5_2:70894584-70894603 | Msa0785740:intron | 30.0% |
| TTGAATATTACCTACCAATG+AGG | + | chr5_2:70894953-70894972 | None:intergenic | 30.0% | |
| AAATTGAACCGAACTGTTAA+TGG | - | chr5_2:70895017-70895036 | Msa0785740:intron | 30.0% | |
| ! | GTATATTCAGTTTTCTCTAG+AGG | + | chr5_2:70895111-70895130 | None:intergenic | 30.0% |
| ! | AACTGAATATACCTTTTGCA+TGG | - | chr5_2:70895119-70895138 | Msa0785740:intron | 30.0% |
| ! | AATCAGTTCGGTTGAATTTT+TGG | + | chr5_2:70895201-70895220 | None:intergenic | 30.0% |
| ! | TTGAACAGTTCTAATCAGTT+CGG | + | chr5_2:70895213-70895232 | None:intergenic | 30.0% |
| ! | AATTTGTGTTCTTTTCGGTT+CGG | + | chr5_2:70895248-70895267 | None:intergenic | 30.0% |
| AGAATAGAAGAATCCAAAGG+GGG | + | chr5_2:70891180-70891199 | None:intergenic | 35.0% | |
| ! | ATGTTCCATTTCTGAGAAAC+AGG | - | chr5_2:70891208-70891227 | Msa0785740:three_prime_UTR | 35.0% |
| ! | ATGAACCTGTTTCTCAGAAA+TGG | + | chr5_2:70891216-70891235 | None:intergenic | 35.0% |
| ! | TTTCTGAGAAACAGGTTCAT+CGG | - | chr5_2:70891216-70891235 | Msa0785740:three_prime_UTR | 35.0% |
| !! | TGAAAGACAACGAGGTATTT+TGG | + | chr5_2:70891265-70891284 | None:intergenic | 35.0% |
| TGAAACAAATCGGGTTAAAC+GGG | + | chr5_2:70891297-70891316 | None:intergenic | 35.0% | |
| CTGAAACAAATCGGGTTAAA+CGG | + | chr5_2:70891298-70891317 | None:intergenic | 35.0% | |
| !! | AGAAGCTTCTGAAACAAATC+GGG | + | chr5_2:70891306-70891325 | None:intergenic | 35.0% |
| AGAAGAAAAAGAGTCAACGA+TGG | + | chr5_2:70891371-70891390 | None:intergenic | 35.0% | |
| !! | AGTTGCATGCTTTTTGATTG+AGG | - | chr5_2:70891551-70891570 | Msa0785740:three_prime_UTR | 35.0% |
| !! | GTTGCATGCTTTTTGATTGA+GGG | - | chr5_2:70891552-70891571 | Msa0785740:three_prime_UTR | 35.0% |
| !! | CTTTTTGATTGAGGGTGTAA+TGG | - | chr5_2:70891560-70891579 | Msa0785740:three_prime_UTR | 35.0% |
| !!! | ATTTTGTGTTGTGATGGGTT+TGG | - | chr5_2:70891597-70891616 | Msa0785740:intron | 35.0% |
| TGATACATGAGTCTGAATTG+TGG | - | chr5_2:70891630-70891649 | Msa0785740:intron | 35.0% | |
| GATACATGAGTCTGAATTGT+GGG | - | chr5_2:70891631-70891650 | Msa0785740:intron | 35.0% | |
| ATACATGAGTCTGAATTGTG+GGG | - | chr5_2:70891632-70891651 | Msa0785740:intron | 35.0% | |
| CTTTATATTGCGGAGAATTG+TGG | - | chr5_2:70891751-70891770 | Msa0785740:intron | 35.0% | |
| ACAGAAAAAACCATTTGTCG+TGG | - | chr5_2:70891824-70891843 | Msa0785740:intron | 35.0% | |
| !!! | TTGCGATGTTTTGGTTCTTT+TGG | - | chr5_2:70891940-70891959 | Msa0785740:intron | 35.0% |
| !!! | TGTTTTGGTTCTTTTGGACA+AGG | - | chr5_2:70891946-70891965 | Msa0785740:intron | 35.0% |
| TCTTTGCATGCATTGCTTAA+AGG | - | chr5_2:70892005-70892024 | Msa0785740:intron | 35.0% | |
| TGAACGAGTCTACAACATAA+TGG | - | chr5_2:70892201-70892220 | Msa0785740:intron | 35.0% | |
| AAACCCAAAATGCAATGTTG+TGG | - | chr5_2:70892279-70892298 | Msa0785740:intron | 35.0% | |
| !!! | GATTTTGATTTGAGTTGTGG+TGG | - | chr5_2:70892323-70892342 | Msa0785740:three_prime_UTR | 35.0% |
| !!! | CAGGGTTTTAAATAGTAGTC+CGG | - | chr5_2:70892429-70892448 | Msa0785740:intron | 35.0% |
| GGTATGACAATAACCATTAC+CGG | + | chr5_2:70892451-70892470 | None:intergenic | 35.0% | |
| ATGGATATCATGTGCTACAT+CGG | + | chr5_2:70893058-70893077 | None:intergenic | 35.0% | |
| AGATGGAAAAATGGATGGTA+GGG | + | chr5_2:70893262-70893281 | None:intergenic | 35.0% | |
| AAGATGGAAAAATGGATGGT+AGG | + | chr5_2:70893263-70893282 | None:intergenic | 35.0% | |
| !! | TGCTGTATTCTAGTTTGGTT+TGG | - | chr5_2:70893392-70893411 | Msa0785740:intron | 35.0% |
| !! | GCTGTATTCTAGTTTGGTTT+GGG | - | chr5_2:70893393-70893412 | Msa0785740:intron | 35.0% |
| AACAAGAGTTTACTTGATGC+AGG | + | chr5_2:70893558-70893577 | None:intergenic | 35.0% | |
| TGTTTATGAGTCAAAGTCGA+CGG | - | chr5_2:70893574-70893593 | Msa0785740:intron | 35.0% | |
| TAAAACCTTGAATGCAACGT+TGG | - | chr5_2:70893635-70893654 | Msa0785740:intron | 35.0% | |
| ! | GTTTTACAGTGTGTAAACCA+TGG | - | chr5_2:70893706-70893725 | Msa0785740:intron | 35.0% |
| !! | GAGATTCAGTTGATTTGTCT+GGG | - | chr5_2:70893729-70893748 | Msa0785740:intron | 35.0% |
| !! | AGATTCAGTTGATTTGTCTG+GGG | - | chr5_2:70893730-70893749 | Msa0785740:intron | 35.0% |
| AAAGCATACCATCAACAACA+GGG | + | chr5_2:70893823-70893842 | None:intergenic | 35.0% | |
| TGAACTCATATTCGCATTAC+GGG | + | chr5_2:70893846-70893865 | None:intergenic | 35.0% | |
| CTGAACTCATATTCGCATTA+CGG | + | chr5_2:70893847-70893866 | None:intergenic | 35.0% | |
| TTAAAAACTCCATAGGCGAT+AGG | - | chr5_2:70894050-70894069 | Msa0785740:intron | 35.0% | |
| TTCCAATCAGTACACTATGA+AGG | - | chr5_2:70894112-70894131 | Msa0785740:intron | 35.0% | |
| !! | TTCTCCTTTGAAGTTGGAAA+AGG | - | chr5_2:70894190-70894209 | Msa0785740:intron | 35.0% |
| !!! | TTCGTCTCATTTTTTTCCTC+TGG | - | chr5_2:70894305-70894324 | Msa0785740:intron | 35.0% |
| !!! | TTTTTTCCTCTGGTTTCAAC+AGG | - | chr5_2:70894315-70894334 | Msa0785740:intron | 35.0% |
| AAATGAGATAAGTACTCTGG+GGG | + | chr5_2:70894412-70894431 | None:intergenic | 35.0% | |
| GAAATGAGATAAGTACTCTG+GGG | + | chr5_2:70894413-70894432 | None:intergenic | 35.0% | |
| AACCAAGCACCAAGAATTTA+CGG | + | chr5_2:70894570-70894589 | None:intergenic | 35.0% | |
| TCAATGAAGGTTGCTATAGT+TGG | - | chr5_2:70894860-70894879 | Msa0785740:intron | 35.0% | |
| TCTCTGAGCATTAATCTTCA+CGG | - | chr5_2:70894976-70894995 | Msa0785740:intron | 35.0% | |
| AGGAAGAACCATTAACAGTT+CGG | + | chr5_2:70895028-70895047 | None:intergenic | 35.0% | |
| !! | TTTGATTTGGAAAAGCACCA+CGG | + | chr5_2:70895085-70895104 | None:intergenic | 35.0% |
| ! | TCTCTAGAGGTAGTTTGATT+TGG | + | chr5_2:70895098-70895117 | None:intergenic | 35.0% |
| AAGAATCAGTTCCATGCAAA+AGG | + | chr5_2:70895133-70895152 | None:intergenic | 35.0% | |
| GAAAAGAACTGAATTGTGAC+GGG | + | chr5_2:70895282-70895301 | None:intergenic | 35.0% | |
| CGAAAAGAACTGAATTGTGA+CGG | + | chr5_2:70895283-70895302 | None:intergenic | 35.0% | |
| ! | CGTCACAATTCAGTTCTTTT+CGG | - | chr5_2:70895281-70895300 | Msa0785740:intron | 35.0% |
| ! | CAATTCAGTTCTTTTCGGTA+CGG | - | chr5_2:70895286-70895305 | Msa0785740:intron | 35.0% |
| ! | CGAAATTTGCATGAGTTGAA+CGG | + | chr5_2:70895399-70895418 | None:intergenic | 35.0% |
| GAAGAGAGAAGAACAAAAAG+CGG | - | chr5_2:70895552-70895571 | Msa0785740:intron | 35.0% | |
| ! | TTCTTTTATGTGCCCAAGTA+TGG | - | chr5_2:70895844-70895863 | Msa0785740:intron | 35.0% |
| CAAACATGAAGGATGTTGTG+GGG | + | chr5_2:70891115-70891134 | Msa0785730:CDS | 40.0% | |
| CCAAACATGAAGGATGTTGT+GGG | + | chr5_2:70891116-70891135 | Msa0785730:CDS | 40.0% | |
| TCCAAACATGAAGGATGTTG+TGG | + | chr5_2:70891117-70891136 | Msa0785730:CDS | 40.0% | |
| !! | GGTATTTTGGAGAACAAGAG+TGG | + | chr5_2:70891252-70891271 | None:intergenic | 40.0% |
| AATCGGGTTAAACGGGTAAA+CGG | + | chr5_2:70891290-70891309 | None:intergenic | 40.0% | |
| !!! | TGTTTTTGGTCTCAGCTGAA+AGG | + | chr5_2:70891332-70891351 | None:intergenic | 40.0% |
| TTCAGCTGAGACCAAAAACA+AGG | - | chr5_2:70891332-70891351 | Msa0785740:three_prime_UTR | 40.0% | |
| ! | GGTCTTGTGTTTGTAACACT+GGG | - | chr5_2:70891520-70891539 | Msa0785740:three_prime_UTR | 40.0% |
| GTCTTGTGTTTGTAACACTG+GGG | - | chr5_2:70891521-70891540 | Msa0785740:three_prime_UTR | 40.0% | |
| ! | CCTAAATATGGCACTGAGAA+GGG | + | chr5_2:70891887-70891906 | None:intergenic | 40.0% |
| ! | TCCTAAATATGGCACTGAGA+AGG | + | chr5_2:70891888-70891907 | None:intergenic | 40.0% |
| ATACACGACTCTGAATTGCA+TGG | - | chr5_2:70892364-70892383 | Msa0785740:three_prime_UTR | 40.0% | |
| !! | ATTGATTTGTACTCAGTGCC+AGG | - | chr5_2:70892410-70892429 | Msa0785740:intron | 40.0% |
| !! | TTGATTTGTACTCAGTGCCA+GGG | - | chr5_2:70892411-70892430 | Msa0785740:intron | 40.0% |
| ! | CGGACTACTATTTAAAACCC+TGG | + | chr5_2:70892431-70892450 | None:intergenic | 40.0% |
| TTGACGAAACCACAACACAA+CGG | + | chr5_2:70892531-70892550 | None:intergenic | 40.0% | |
| AAGATTCGCGACAGTAATCT+AGG | + | chr5_2:70892576-70892595 | None:intergenic | 40.0% | |
| TACAACACCCTTCCTCAATA+TGG | + | chr5_2:70892620-70892639 | None:intergenic | 40.0% | |
| CATCACAACCATTGCATTTC+GGG | + | chr5_2:70892992-70893011 | None:intergenic | 40.0% | |
| GCATCACAACCATTGCATTT+CGG | + | chr5_2:70892993-70893012 | None:intergenic | 40.0% | |
| TTGAGATGTTAGATGCGTCA+TGG | + | chr5_2:70893077-70893096 | None:intergenic | 40.0% | |
| ! | GGTTTGTTCATGCTTTCACA+GGG | + | chr5_2:70893133-70893152 | None:intergenic | 40.0% |
| TATTGCAAACTTGCAATGGG+GGG | + | chr5_2:70893154-70893173 | None:intergenic | 40.0% | |
| GTATTGCAAACTTGCAATGG+GGG | + | chr5_2:70893155-70893174 | None:intergenic | 40.0% | |
| CGTATTGCAAACTTGCAATG+GGG | + | chr5_2:70893156-70893175 | None:intergenic | 40.0% | |
| GCGTATTGCAAACTTGCAAT+GGG | + | chr5_2:70893157-70893176 | None:intergenic | 40.0% | |
| GATTCAGCTAGGTAGAACTA+GGG | + | chr5_2:70893216-70893235 | None:intergenic | 40.0% | |
| AGATTCAGCTAGGTAGAACT+AGG | + | chr5_2:70893217-70893236 | None:intergenic | 40.0% | |
| CAATGAAGCTAGATTCAGCT+AGG | + | chr5_2:70893227-70893246 | None:intergenic | 40.0% | |
| ! | AGCTGAATCTAGCTTCATTG+AGG | - | chr5_2:70893227-70893246 | Msa0785740:intron | 40.0% |
| ! | GCTGAATCTAGCTTCATTGA+GGG | - | chr5_2:70893228-70893247 | Msa0785740:intron | 40.0% |
| CTAAGTAACAAAGCAGACCA+CGG | + | chr5_2:70893462-70893481 | None:intergenic | 40.0% | |
| CAAATCAACTGAATCTCCCA+TGG | + | chr5_2:70893726-70893745 | None:intergenic | 40.0% | |
| !! | GGAGATTCAGTTGATTTGTC+TGG | - | chr5_2:70893728-70893747 | Msa0785740:intron | 40.0% |
| ! | GAAAGCATACCATCAACAAC+AGG | + | chr5_2:70893824-70893843 | None:intergenic | 40.0% |
| ! | TTGTTGATAAGAGTGATCGG+AGG | - | chr5_2:70894008-70894027 | Msa0785740:intron | 40.0% |
| ! | TGTTGATAAGAGTGATCGGA+GGG | - | chr5_2:70894009-70894028 | Msa0785740:intron | 40.0% |
| ! | TGCCTTCATAGTGTACTGAT+TGG | + | chr5_2:70894117-70894136 | None:intergenic | 40.0% |
| ! | ACTGCCTTTTCCAACTTCAA+AGG | + | chr5_2:70894197-70894216 | None:intergenic | 40.0% |
| TGGAAAAGGCAGTGTTATCA+AGG | - | chr5_2:70894204-70894223 | Msa0785740:intron | 40.0% | |
| CATTGCAGTCAAAACCATGA+AGG | - | chr5_2:70894234-70894253 | Msa0785740:intron | 40.0% | |
| TGCAAGCCAGAATATGCATA+TGG | - | chr5_2:70894361-70894380 | Msa0785740:intron | 40.0% | |
| AATGAGATAAGTACTCTGGG+GGG | + | chr5_2:70894411-70894430 | None:intergenic | 40.0% | |
| GAAGCTATGCCGTAAATTCT+TGG | - | chr5_2:70894558-70894577 | Msa0785740:intron | 40.0% | |
| GATTCAGCTCATATCCTACA+AGG | - | chr5_2:70894887-70894906 | Msa0785740:intron | 40.0% | |
| GAGCATTAATCTTCACGGTT+CGG | - | chr5_2:70894981-70895000 | Msa0785740:intron | 40.0% | |
| CTTCCTAAACCAAACCAAAC+TGG | - | chr5_2:70895042-70895061 | Msa0785740:intron | 40.0% | |
| !!! | GTTCTTTTCGGTTCGGTTTT+AGG | + | chr5_2:70895241-70895260 | None:intergenic | 40.0% |
| TGTAAGTTCTGTTTGAGCCA+TGG | - | chr5_2:70895345-70895364 | Msa0785740:intron | 40.0% | |
| ! | AATTTGCATGAGTTGAACGG+CGG | + | chr5_2:70895396-70895415 | None:intergenic | 40.0% |
| GCGAAACTTGATGCCAAAAA+AGG | - | chr5_2:70895595-70895614 | Msa0785740:intron | 40.0% | |
| CTTGATGCCAAAAAAGGTCA+TGG | - | chr5_2:70895601-70895620 | Msa0785740:intron | 40.0% | |
| TGCCAAAAAAGGTCATGGAA+AGG | - | chr5_2:70895606-70895625 | Msa0785740:intron | 40.0% | |
| GCCAAAAAAGGTCATGGAAA+GGG | - | chr5_2:70895607-70895626 | Msa0785740:intron | 40.0% | |
| !!! | ACCCTTTCCATGACCTTTTT+TGG | + | chr5_2:70895611-70895630 | None:intergenic | 40.0% |
| AAAGGTCATGGAAAGGGTAA+AGG | - | chr5_2:70895613-70895632 | Msa0785740:intron | 40.0% | |
| AAGGTCATGGAAAGGGTAAA+GGG | - | chr5_2:70895614-70895633 | Msa0785740:intron | 40.0% | |
| GGTAAAGGGAAAGCAAAGTA+GGG | - | chr5_2:70895628-70895647 | Msa0785740:intron | 40.0% | |
| CCCACAACATCCTTCATGTT+TGG | - | chr5_2:70891113-70891132 | Msa0785740:three_prime_UTR | 45.0% | |
| GCTATACGCTCCAAACATGA+AGG | + | chr5_2:70891126-70891145 | Msa0785730:CDS | 45.0% | |
| !! | AAACGGGTTGAAAGACAACG+AGG | + | chr5_2:70891273-70891292 | None:intergenic | 45.0% |
| ATCGGGTTAAACGGGTAAAC+GGG | + | chr5_2:70891289-70891308 | None:intergenic | 45.0% | |
| ! | GGGTCTTGTGTTTGTAACAC+TGG | - | chr5_2:70891519-70891538 | Msa0785740:three_prime_UTR | 45.0% |
| CGGAGAATTGTGGTCAAATG+TGG | - | chr5_2:70891761-70891780 | Msa0785740:intron | 45.0% | |
| CAGTGGCTCAAAATTTGTCG+CGG | - | chr5_2:70891849-70891868 | Msa0785740:intron | 45.0% | |
| CCCTTCTCAGTGCCATATTT+AGG | - | chr5_2:70891884-70891903 | Msa0785740:intron | 45.0% | |
| ACTCGAGAGCTCAACAACAA+TGG | + | chr5_2:70892061-70892080 | None:intergenic | 45.0% | |
| !! | GATTTGAGTTGTGGTGGGTT+TGG | - | chr5_2:70892329-70892348 | Msa0785740:three_prime_UTR | 45.0% |
| TACCACAATGCTTGATACCG+TGG | - | chr5_2:70892467-70892486 | Msa0785740:intron | 45.0% | |
| ACCACAATGCTTGATACCGT+GGG | - | chr5_2:70892468-70892487 | Msa0785740:intron | 45.0% | |
| CATTTGACCATGATTCCCCA+CGG | + | chr5_2:70892487-70892506 | None:intergenic | 45.0% | |
| TGGGGAATCATGGTCAAATG+TGG | - | chr5_2:70892487-70892506 | Msa0785740:intron | 45.0% | |
| ATGGTCAAATGTGGTCGATG+CGG | - | chr5_2:70892496-70892515 | Msa0785740:intron | 45.0% | |
| ! | CCTCAATATGGCACTGAGTA+GGG | + | chr5_2:70892608-70892627 | None:intergenic | 45.0% |
| ! | TCCTCAATATGGCACTGAGT+AGG | + | chr5_2:70892609-70892628 | None:intergenic | 45.0% |
| ACTCAGTGCCATATTGAGGA+AGG | - | chr5_2:70892609-70892628 | Msa0785740:intron | 45.0% | |
| CTCAGTGCCATATTGAGGAA+GGG | - | chr5_2:70892610-70892629 | Msa0785740:intron | 45.0% | |
| !! | TGTCATGTTTTGGATCAGGC+TGG | - | chr5_2:70892663-70892682 | Msa0785740:intron | 45.0% |
| ! | GGGTTTGTTCATGCTTTCAC+AGG | + | chr5_2:70893134-70893153 | None:intergenic | 45.0% |
| GGCGTATTGCAAACTTGCAA+TGG | + | chr5_2:70893158-70893177 | None:intergenic | 45.0% | |
| TTGCTTATGAAGCTTCACCG+TGG | - | chr5_2:70893442-70893461 | Msa0785740:intron | 45.0% | |
| ! | CTTGAATGCAACGTTGGTGA+CGG | - | chr5_2:70893641-70893660 | Msa0785740:intron | 45.0% |
| !! | TCAGTTGATTTGTCTGGGGA+TGG | - | chr5_2:70893734-70893753 | Msa0785740:intron | 45.0% |
| GAGTCATCAAGACCATTGTG+AGG | - | chr5_2:70893759-70893778 | Msa0785740:intron | 45.0% | |
| !! | TGACTTGCTCTTCCTCACAA+TGG | + | chr5_2:70893774-70893793 | None:intergenic | 45.0% |
| ACAACAGGGAAGTCTTCTGT+TGG | + | chr5_2:70893809-70893828 | None:intergenic | 45.0% | |
| GAAGACTTCCCTGTTGTTGA+TGG | - | chr5_2:70893812-70893831 | Msa0785740:intron | 45.0% | |
| CGTAGTGTCAAAGACTTCAC+CGG | + | chr5_2:70894152-70894171 | None:intergenic | 45.0% | |
| AAGGCAGTGTTATCAAGGCT+TGG | - | chr5_2:70894209-70894228 | Msa0785740:intron | 45.0% | |
| AGGCAGTGTTATCAAGGCTT+GGG | - | chr5_2:70894210-70894229 | Msa0785740:intron | 45.0% | |
| ! | TTCCTCTGGTTTCAACAGGT+TGG | - | chr5_2:70894319-70894338 | Msa0785740:intron | 45.0% |
| GCGCTACCATATGCATATTC+TGG | + | chr5_2:70894370-70894389 | None:intergenic | 45.0% | |
| ! | GAATATGCATATGGTAGCGC+AGG | - | chr5_2:70894370-70894389 | Msa0785740:intron | 45.0% |
| !! | TGCCGTAAATTCTTGGTGCT+TGG | - | chr5_2:70894565-70894584 | Msa0785740:intron | 45.0% |
| ! | AAACAAGTGTTGCGCTGCAA+GGG | + | chr5_2:70894686-70894705 | None:intergenic | 45.0% |
| ! | AAAACAAGTGTTGCGCTGCA+AGG | + | chr5_2:70894687-70894706 | None:intergenic | 45.0% |
| AAGTTGAGCTAGTTGCGTGT+AGG | - | chr5_2:70894709-70894728 | Msa0785740:intron | 45.0% | |
| CTCAGAAACACTTCCAGTAG+TGG | + | chr5_2:70894748-70894767 | None:intergenic | 45.0% | |
| !! | CACTACTGGAAGTGTTTCTG+AGG | - | chr5_2:70894746-70894765 | Msa0785740:intron | 45.0% |
| !! | TGGAAGTGTTTCTGAGGAGA+GGG | - | chr5_2:70894752-70894771 | Msa0785740:intron | 45.0% |
| ! | GAAGGTTGCTATAGTTGGTG+AGG | - | chr5_2:70894865-70894884 | Msa0785740:intron | 45.0% |
| ATTCGAACTCACGTCCTTGT+AGG | + | chr5_2:70894904-70894923 | None:intergenic | 45.0% | |
| TACCAATGAGGTTCTCACTC+CGG | + | chr5_2:70894941-70894960 | None:intergenic | 45.0% | |
| !! | TAATCTTCACGGTTCGGTTC+AGG | - | chr5_2:70894987-70895006 | Msa0785740:intron | 45.0% |
| !! | GTGCCAGTTTGGTTTGGTTT+AGG | + | chr5_2:70895048-70895067 | None:intergenic | 45.0% |
| ! | ATTTGCATGAGTTGAACGGC+GGG | + | chr5_2:70895395-70895414 | None:intergenic | 45.0% |
| CTTCTTCTTCTCCTCCTCTT+TGG | + | chr5_2:70895536-70895555 | None:intergenic | 45.0% | |
| GGGTAAAGGGAAAGCAAAGT+AGG | - | chr5_2:70895627-70895646 | Msa0785740:intron | 45.0% | |
| !! | AGATGTTGGGTAGCTTGCTA+TGG | - | chr5_2:70895764-70895783 | Msa0785740:CDS | 45.0% |
| AGTTGTGGTGAGCCATACTT+GGG | + | chr5_2:70895859-70895878 | None:intergenic | 45.0% | |
| AAGTTGTGGTGAGCCATACT+TGG | + | chr5_2:70895860-70895879 | None:intergenic | 45.0% | |
| !! | TTAAAAAAAAAACATAAAAA+TGG | + | chr5_2:70892701-70892720 | None:intergenic | 5.0% |
| ACAGGTTCATCGGACGCATA+TGG | - | chr5_2:70891226-70891245 | Msa0785740:three_prime_UTR | 50.0% | |
| !!! | CAACGGCTTTTGAGGTCGAA+TGG | + | chr5_2:70891788-70891807 | None:intergenic | 50.0% |
| TCGCTGAAACCACAACGCAA+CGG | + | chr5_2:70891805-70891824 | None:intergenic | 50.0% | |
| AACCATTTGTCGTGGACCAG+TGG | - | chr5_2:70891832-70891851 | Msa0785740:intron | 50.0% | |
| ! | CGCGACAAATTTTGAGCCAC+TGG | + | chr5_2:70891851-70891870 | None:intergenic | 50.0% |
| CCACAATGCTTGATACCGTG+GGG | - | chr5_2:70892469-70892488 | Msa0785740:intron | 50.0% | |
| CTTGATACCGTGGGGAATCA+TGG | - | chr5_2:70892477-70892496 | Msa0785740:intron | 50.0% | |
| ! | CCACAACACAACGGCTTTTG+AGG | + | chr5_2:70892522-70892541 | None:intergenic | 50.0% |
| CCTCAAAAGCCGTTGTGTTG+TGG | - | chr5_2:70892519-70892538 | Msa0785740:intron | 50.0% | |
| CCCTACTCAGTGCCATATTG+AGG | - | chr5_2:70892605-70892624 | Msa0785740:intron | 50.0% | |
| TATCATGTGCTACATCGGCG+AGG | + | chr5_2:70893053-70893072 | None:intergenic | 50.0% | |
| AAGTTTGCAATACGCCAGCG+AGG | - | chr5_2:70893162-70893181 | Msa0785740:intron | 50.0% | |
| GGGTTCAGAACATCAGAGCT+GGG | + | chr5_2:70893196-70893215 | None:intergenic | 50.0% | |
| AGGGTTCAGAACATCAGAGC+TGG | + | chr5_2:70893197-70893216 | None:intergenic | 50.0% | |
| GGAAAAATGGATGGTAGGGC+TGG | + | chr5_2:70893258-70893277 | None:intergenic | 50.0% | |
| CGTCACCAACGTTGCATTCA+AGG | + | chr5_2:70893643-70893662 | None:intergenic | 50.0% | |
| !! | GTTGATTTGTCTGGGGATGG+TGG | - | chr5_2:70893737-70893756 | Msa0785740:intron | 50.0% |
| GAAGAGCAAGTCAGATGCTG+TGG | - | chr5_2:70893781-70893800 | Msa0785740:intron | 50.0% | |
| CATGCAAGTCCTATCGCCTA+TGG | + | chr5_2:70894062-70894081 | None:intergenic | 50.0% | |
| CATAGGCGATAGGACTTGCA+TGG | - | chr5_2:70894060-70894079 | Msa0785740:intron | 50.0% | |
| CTCCAACCTGTTGAAACCAG+AGG | + | chr5_2:70894324-70894343 | None:intergenic | 50.0% | |
| ! | AAGTACTCTGGGGGGATATC+TGG | + | chr5_2:70894403-70894422 | None:intergenic | 50.0% |
| !! | CTGGAAGTGTTTCTGAGGAG+AGG | - | chr5_2:70894751-70894770 | Msa0785740:intron | 50.0% |
| AATGAGGTTCTCACTCCGGT+AGG | + | chr5_2:70894937-70894956 | None:intergenic | 50.0% | |
| TACCGGAGTGAGAACCTCAT+TGG | - | chr5_2:70894936-70894955 | Msa0785740:intron | 50.0% | |
| GGAGTGAGAACCTCATTGGT+AGG | - | chr5_2:70894940-70894959 | Msa0785740:intron | 50.0% | |
| ACCAAACCAAACTGGCACGA+AGG | - | chr5_2:70895050-70895069 | Msa0785740:intron | 50.0% | |
| ACCTTCGTGCCAGTTTGGTT+TGG | + | chr5_2:70895054-70895073 | None:intergenic | 50.0% | |
| ACTGAACCTTCGTGCCAGTT+TGG | + | chr5_2:70895059-70895078 | None:intergenic | 50.0% | |
| CGTGTAGCACTTTCCCCCTT+TGG | - | chr5_2:70891164-70891183 | Msa0785740:three_prime_UTR | 55.0% | |
| ! | CCACAACGCAACGGCTTTTG+AGG | + | chr5_2:70891796-70891815 | None:intergenic | 55.0% |
| CCTCAAAAGCCGTTGCGTTG+TGG | - | chr5_2:70891793-70891812 | Msa0785740:intron | 55.0% | |
| AGCCACTGGTCCACGACAAA+TGG | + | chr5_2:70891837-70891856 | None:intergenic | 55.0% | |
| ! | CCCCACGGTATCAAGCATTG+TGG | + | chr5_2:70892472-70892491 | None:intergenic | 55.0% |
| ! | GAAGGCACACTCGCTGATAC+CGG | - | chr5_2:70894130-70894149 | Msa0785740:intron | 55.0% |
| ! | TACTCTGGGGGGATATCTGG+CGG | + | chr5_2:70894400-70894419 | None:intergenic | 55.0% |
| AGTTGCGTGTAGGCCACGTA+AGG | - | chr5_2:70894719-70894738 | Msa0785740:intron | 55.0% | |
| GTTGCGTGTAGGCCACGTAA+GGG | - | chr5_2:70894720-70894739 | Msa0785740:intron | 55.0% | |
| ! | GTGTTTCTGAGGAGAGGGCT+AGG | - | chr5_2:70894757-70894776 | Msa0785740:intron | 55.0% |
| GATTGCTGCTGCAGCCAAAG+AGG | - | chr5_2:70895519-70895538 | Msa0785740:intron | 55.0% | |
| TGGAGCGTATAGCACACGCG+TGG | - | chr5_2:70891133-70891152 | Msa0785740:three_prime_UTR | 60.0% | |
| ! | CCAGTAGTGGAGCCCTTACG+TGG | + | chr5_2:70894735-70894754 | None:intergenic | 60.0% |
| CCACGTAAGGGCTCCACTAC+TGG | - | chr5_2:70894732-70894751 | Msa0785740:intron | 60.0% | |
| GAGGGCTAGGCTCGAGTAAG+TGG | - | chr5_2:70894770-70894789 | Msa0785740:intron | 60.0% | |
| CGAATCCTGCTACCGCCTAC+CGG | - | chr5_2:70894919-70894938 | Msa0785740:intron | 60.0% | |
| GAGGTTCTCACTCCGGTAGG+CGG | + | chr5_2:70894934-70894953 | None:intergenic | 60.0% | |
| CACGAAGGTTCAGTGCACCG+TGG | - | chr5_2:70895065-70895084 | Msa0785740:intron | 60.0% | |
| ! | GAGGGCTAGGCAAAGCACCA+TGG | + | chr5_2:70895365-70895384 | None:intergenic | 60.0% |
| TGCTGCTGCAGCCAAAGAGG+AGG | - | chr5_2:70895522-70895541 | Msa0785740:intron | 60.0% | |
| GCTGGGTTCACTCACCTCGC+TGG | + | chr5_2:70893179-70893198 | None:intergenic | 65.0% | |
| TCACTCCGGTAGGCGGTAGC+AGG | + | chr5_2:70894927-70894946 | None:intergenic | 65.0% | |
| TGAACGGCGGGAGCTCACGA+GGG | + | chr5_2:70895383-70895402 | None:intergenic | 65.0% | |
| TTGAACGGCGGGAGCTCACG+AGG | + | chr5_2:70895384-70895403 | None:intergenic | 65.0% | |
| GGCGGGAGCTCACGAGGGCT+AGG | + | chr5_2:70895378-70895397 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 70891087 | 70895994 | 70891087 | ID=Msa0785740;Name=Msa0785740 |
| chr5_2 | mRNA | 70891087 | 70895994 | 70891087 | ID=Msa0785740-mRNA-1;Parent=Msa0785740;Name=Msa0785740-mRNA-1;_AED=0.07;_eAED=0.07;_QI=6|0.83|0.71|1|0.66|0.57|7|936|60 |
| chr5_2 | exon | 70891087 | 70891583 | 70891087 | ID=Msa0785740-mRNA-1:exon:21384;Parent=Msa0785740-mRNA-1 |
| chr5_2 | exon | 70892297 | 70892389 | 70892297 | ID=Msa0785740-mRNA-1:exon:21383;Parent=Msa0785740-mRNA-1 |
| chr5_2 | exon | 70892665 | 70892744 | 70892665 | ID=Msa0785740-mRNA-1:exon:21382;Parent=Msa0785740-mRNA-1 |
| chr5_2 | exon | 70892826 | 70892959 | 70892826 | ID=Msa0785740-mRNA-1:exon:21381;Parent=Msa0785740-mRNA-1 |
| chr5_2 | exon | 70893248 | 70893366 | 70893248 | ID=Msa0785740-mRNA-1:exon:21380;Parent=Msa0785740-mRNA-1 |
| chr5_2 | exon | 70895728 | 70895851 | 70895728 | ID=Msa0785740-mRNA-1:exon:21379;Parent=Msa0785740-mRNA-1 |
| chr5_2 | exon | 70895917 | 70895994 | 70895917 | ID=Msa0785740-mRNA-1:exon:21378;Parent=Msa0785740-mRNA-1 |
| chr5_2 | five_prime_UTR | 70895989 | 70895994 | 70895989 | ID=Msa0785740-mRNA-1:five_prime_utr;Parent=Msa0785740-mRNA-1 |
| chr5_2 | CDS | 70895917 | 70895988 | 70895917 | ID=Msa0785740-mRNA-1:cds;Parent=Msa0785740-mRNA-1 |
| chr5_2 | CDS | 70895741 | 70895851 | 70895741 | ID=Msa0785740-mRNA-1:cds;Parent=Msa0785740-mRNA-1 |
| chr5_2 | three_prime_UTR | 70895728 | 70895740 | 70895728 | ID=Msa0785740-mRNA-1:three_prime_utr;Parent=Msa0785740-mRNA-1 |
| chr5_2 | three_prime_UTR | 70893248 | 70893366 | 70893248 | ID=Msa0785740-mRNA-1:three_prime_utr;Parent=Msa0785740-mRNA-1 |
| chr5_2 | three_prime_UTR | 70892826 | 70892959 | 70892826 | ID=Msa0785740-mRNA-1:three_prime_utr;Parent=Msa0785740-mRNA-1 |
| chr5_2 | three_prime_UTR | 70892665 | 70892744 | 70892665 | ID=Msa0785740-mRNA-1:three_prime_utr;Parent=Msa0785740-mRNA-1 |
| chr5_2 | three_prime_UTR | 70892297 | 70892389 | 70892297 | ID=Msa0785740-mRNA-1:three_prime_utr;Parent=Msa0785740-mRNA-1 |
| chr5_2 | three_prime_UTR | 70891087 | 70891583 | 70891087 | ID=Msa0785740-mRNA-1:three_prime_utr;Parent=Msa0785740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
