AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0414950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414950 MtrunA17_Chr3g0108321 98.266 346 6 0 1 346 1 346 0.0 693
Msa0414950 MtrunA17_Chr7g0262801 50.416 361 172 3 41 395 67 426 1.19e-127 375
Msa0414950 MtrunA17_Chr1g0182711 50.693 361 171 3 41 395 68 427 3.98e-127 374
Msa0414950 MtrunA17_Chr4g0050561 46.866 335 174 2 73 403 70 404 6.15e-102 309
Msa0414950 MtrunA17_Chr1g0200081 56.809 257 107 2 140 393 156 411 1.93e-101 308
Msa0414950 MtrunA17_Chr8g0345461 54.074 270 121 1 127 393 133 402 2.14e-101 308
Msa0414950 MtrunA17_Chr1g0192151 38.386 409 228 4 27 411 14 422 2.05e-100 305
Msa0414950 MtrunA17_Chr4g0014731 37.701 435 235 6 1 411 1 423 9.58e-100 303
Msa0414950 MtrunA17_Chr3g0141901 43.305 351 191 3 55 398 29 378 6.80e-98 298
Msa0414950 MtrunA17_Chr3g0145011 43.429 350 190 4 60 403 41 388 1.32e-96 295
Msa0414950 MtrunA17_Chr2g0327121 40.210 286 154 5 115 395 442 715 7.16e-59 205
Msa0414950 MtrunA17_Chr2g0327121 43.590 234 126 2 158 388 206 436 1.58e-52 187
Msa0414950 MtrunA17_Chr7g0264521 40.559 286 153 5 115 395 441 714 1.63e-58 204
Msa0414950 MtrunA17_Chr7g0264521 44.017 234 125 2 158 388 205 435 1.15e-55 196
Msa0414950 MtrunA17_Chr1g0180791 39.446 289 158 5 115 398 440 716 1.05e-57 202
Msa0414950 MtrunA17_Chr1g0180791 44.017 234 125 2 158 388 204 434 7.77e-56 197
Msa0414950 MtrunA17_Chr4g0052411 42.678 239 133 2 159 394 229 466 1.21e-56 197
Msa0414950 MtrunA17_Chr7g0255651 37.248 298 171 4 95 383 219 509 2.76e-56 194
Msa0414950 MtrunA17_Chr7g0255651 27.602 221 139 4 196 410 50 255 3.71e-18 86.7
Msa0414950 MtrunA17_Chr2g0297281 42.259 239 134 2 159 394 286 523 3.85e-54 191
Msa0414950 MtrunA17_Chr7g0217421 41.004 239 137 2 159 394 39 276 3.24e-53 182
Msa0414950 MtrunA17_Chr5g0429571 39.871 311 159 9 96 393 257 552 3.61e-53 189
Msa0414950 MtrunA17_Chr8g0388371 42.400 250 130 5 159 396 404 651 5.96e-52 186
Msa0414950 MtrunA17_Chr3g0104211 44.444 243 124 6 159 393 304 543 6.52e-50 180
Msa0414950 MtrunA17_Chr4g0031821 38.132 257 152 4 144 394 305 560 1.13e-48 177
Msa0414950 MtrunA17_Chr3g0094871 39.834 241 139 3 159 394 11 250 3.50e-48 170
Msa0414950 MtrunA17_Chr7g0248361 37.879 264 157 4 137 394 170 432 1.46e-47 172
Msa0414950 MtrunA17_Chr6g0476861 40.496 242 137 4 159 394 197 437 3.73e-47 171
Msa0414950 MtrunA17_Chr7g0260601 40.486 247 136 5 156 394 237 480 4.15e-47 171
Msa0414950 MtrunA17_Chr4g0062081 93.671 79 4 1 162 239 10 88 4.34e-47 156
Msa0414950 MtrunA17_Chr7g0255691 39.056 233 139 1 155 384 282 514 1.09e-46 168
Msa0414950 MtrunA17_Chr7g0255691 31.140 228 148 4 164 384 22 247 1.04e-23 103
Msa0414950 MtrunA17_Chr7g0255641 38.627 233 139 2 155 384 654 885 1.80e-46 171
Msa0414950 MtrunA17_Chr7g0255641 39.674 184 100 5 198 376 432 609 6.16e-31 125
Msa0414950 MtrunA17_Chr7g0255721 39.056 233 138 2 155 384 681 912 3.32e-46 170
Msa0414950 MtrunA17_Chr7g0255721 33.929 224 139 3 164 383 391 609 5.92e-32 128
Msa0414950 MtrunA17_Chr3g0143721 39.738 229 134 2 159 384 249 476 3.34e-46 169
Msa0414950 MtrunA17_Chr2g0331161 40.260 231 134 2 158 385 414 643 1.13e-45 168
Msa0414950 MtrunA17_Chr7g0255901 37.008 254 152 6 136 383 616 867 6.05e-44 164
Msa0414950 MtrunA17_Chr8g0362771 37.083 240 145 3 158 394 236 472 1.57e-43 161
Msa0414950 MtrunA17_Chr6g0456351 38.075 239 139 4 159 392 317 551 2.64e-43 159
Msa0414950 MtrunA17_Chr1g0158881 38.961 231 129 4 155 380 325 548 2.95e-43 161
Msa0414950 MtrunA17_Chr2g0327231 41.463 205 111 3 115 319 311 506 6.37e-43 157
Msa0414950 MtrunA17_Chr2g0327231 48.352 91 43 1 158 248 152 238 2.68e-20 92.8
Msa0414950 MtrunA17_Chr3g0129971 39.777 269 140 9 128 384 271 529 1.37e-42 159
Msa0414950 MtrunA17_Chr3g0108311 100.000 67 0 0 346 412 1 67 2.64e-42 143
Msa0414950 MtrunA17_Chr2g0277831 38.462 234 134 5 154 381 528 757 5.22e-42 157
Msa0414950 MtrunA17_Chr2g0277831 37.004 227 138 3 161 383 245 470 3.50e-36 140
Msa0414950 MtrunA17_Chr2g0321241 38.075 239 132 7 155 385 128 358 1.38e-40 149
Msa0414950 MtrunA17_Chr4g0052271 34.766 256 152 6 139 383 92 343 2.61e-40 148
Msa0414950 MtrunA17_Chr4g0026631 36.555 238 137 6 155 385 123 353 5.67e-40 147
Msa0414950 MtrunA17_Chr3g0135721 37.395 238 140 4 161 394 226 458 1.69e-39 150
Msa0414950 MtrunA17_Chr3g0086401 43.503 177 97 1 157 333 383 556 1.23e-38 147
Msa0414950 MtrunA17_Chr3g0086401 35.808 229 120 9 161 372 94 312 1.87e-27 114
Msa0414950 MtrunA17_Chr7g0246111 37.768 233 133 6 157 383 210 436 1.81e-38 145
Msa0414950 MtrunA17_Chr8g0387641 36.797 231 137 5 158 383 520 746 2.88e-38 147
Msa0414950 MtrunA17_Chr6g0462581 36.681 229 137 4 159 383 500 724 5.42e-38 146
Msa0414950 MtrunA17_Chr4g0004121 35.294 238 138 5 157 383 240 472 9.40e-38 143
Msa0414950 MtrunA17_Chr3g0127431 34.483 261 151 7 158 410 83 331 4.10e-37 139
Msa0414950 MtrunA17_Chr3g0127401 36.910 233 134 6 158 383 80 306 5.15e-37 138
Msa0414950 MtrunA17_Chr3g0135761 35.685 241 146 4 158 394 221 456 6.09e-37 142
Msa0414950 MtrunA17_Chr2g0316851 35.955 267 150 7 129 384 569 825 7.91e-37 143
Msa0414950 MtrunA17_Chr1g0202371 36.522 230 136 5 159 383 397 621 1.03e-36 142
Msa0414950 MtrunA17_Chr4g0033451 36.325 234 137 4 159 383 380 610 1.03e-36 142
Msa0414950 MtrunA17_Chr4g0043381 36.000 225 138 3 161 382 839 1060 1.32e-36 142
Msa0414950 MtrunA17_Chr3g0086411 40.678 177 102 1 157 333 213 386 1.73e-36 139
Msa0414950 MtrunA17_Chr3g0086411 36.242 149 80 4 247 383 7 152 8.43e-14 73.2
Msa0414950 MtrunA17_Chr1g0195731 38.554 249 137 8 159 401 934 1172 1.78e-36 142
Msa0414950 MtrunA17_Chr5g0432631 35.223 247 153 3 151 394 221 463 2.30e-36 141
Msa0414950 MtrunA17_Chr5g0397121 36.087 230 138 4 159 383 513 738 2.49e-36 141
Msa0414950 MtrunA17_Chr1g0195741 38.528 231 132 6 159 383 938 1164 3.25e-36 141
Msa0414950 MtrunA17_Chr3g0116131 40.179 224 124 6 159 376 902 1121 7.00e-36 140
Msa0414950 MtrunA17_Chr1g0204031 36.797 231 137 5 158 383 556 782 2.17e-35 138
Msa0414950 MtrunA17_Chr1g0202381 37.611 226 128 6 159 377 468 687 4.20e-35 137
Msa0414950 MtrunA17_Chr3g0135781 41.463 164 92 2 158 321 54 213 3.34e-34 126
Msa0414950 MtrunA17_Chr4g0038101 35.498 231 139 6 159 383 721 947 4.20e-33 132
Msa0414950 MtrunA17_Chr6g0459561 38.298 188 106 6 157 341 380 560 5.96e-33 130
Msa0414950 MtrunA17_Chr6g0459541 39.560 182 101 6 155 333 38 213 7.96e-32 124
Msa0414950 MtrunA17_Chr4g0047411 29.965 287 182 7 114 383 131 415 1.87e-30 124
Msa0414950 MtrunA17_Chr2g0289231 34.061 229 135 5 158 376 296 518 1.74e-29 120
Msa0414950 MtrunA17_Chr5g0432641 32.773 238 149 4 162 394 194 425 1.91e-29 120
Msa0414950 MtrunA17_Chr6g0459551 32.692 260 142 8 81 333 35 268 1.10e-28 116
Msa0414950 MtrunA17_Chr8g0357301 34.615 208 119 4 197 392 507 709 1.11e-27 115
Msa0414950 MtrunA17_Chr1g0168321 29.368 269 146 5 132 394 137 367 1.99e-26 110
Msa0414950 MtrunA17_Chr1g0190401 31.140 228 146 7 151 374 669 889 2.29e-23 103
Msa0414950 MtrunA17_Chr5g0432391 32.298 161 103 2 237 394 81 238 1.94e-17 84.0
Msa0414950 MtrunA17_Chr5g0404651 31.053 190 110 6 171 351 226 403 3.73e-15 77.0
Msa0414950 MtrunA17_Chr6g0459531 27.350 234 130 8 157 383 65 265 4.80e-15 75.5
Msa0414950 MtrunA17_Chr5g0404291 35.664 143 78 6 195 333 387 519 1.55e-14 75.5
Msa0414950 MtrunA17_Chr8g0372701 32.530 166 95 6 171 329 234 389 4.42e-14 73.9
Msa0414950 MtrunA17_Chr2g0315911 28.485 165 105 4 171 330 216 372 1.46e-13 72.0
Msa0414950 MtrunA17_Chr2g0315971 26.840 231 137 10 124 330 141 363 3.07e-13 71.6
Msa0414950 MtrunA17_Chr2g0315971 27.083 240 145 10 127 354 448 669 3.30e-13 71.6
Msa0414950 MtrunA17_Chr2g0315991 30.065 153 90 5 186 331 224 366 9.37e-13 69.7
Msa0414950 MtrunA17_Chr2g0316041 27.624 181 111 6 186 354 167 339 4.90e-12 67.4
Msa0414950 MtrunA17_Chr6g0452361 32.143 168 97 6 170 329 5 163 2.52e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414950 AT5G58290.1 91.525 413 20 3 4 412 7 408 0.0 763
Msa0414950 AT4G29040.1 49.479 384 183 5 18 395 46 424 7.13e-128 376
Msa0414950 AT2G20140.1 49.219 384 184 5 18 395 46 424 2.28e-127 375
Msa0414950 AT5G19990.2 46.903 339 175 3 73 407 14 351 1.89e-102 308
Msa0414950 AT5G19990.1 44.474 371 201 3 41 407 40 409 2.52e-102 310
Msa0414950 AT5G19990.3 44.474 371 201 3 41 407 40 409 2.52e-102 310
Msa0414950 AT5G20000.1 45.013 371 196 5 41 407 43 409 2.74e-102 310
Msa0414950 AT1G53750.1 54.074 270 121 1 127 393 133 402 3.68e-101 307
Msa0414950 AT1G09100.1 38.386 409 228 4 27 411 14 422 4.95e-100 304
Msa0414950 AT3G05530.1 38.386 409 228 4 27 411 15 423 8.86e-100 304
Msa0414950 AT1G45000.1 43.590 351 190 3 55 398 29 378 3.47e-98 299
Msa0414950 AT5G43010.1 43.590 351 190 3 55 398 29 378 4.91e-98 298
Msa0414950 AT1G53780.1 54.086 257 115 1 140 393 318 574 4.61e-93 292
Msa0414950 AT1G53780.4 54.086 257 115 1 140 393 318 574 4.61e-93 292
Msa0414950 AT1G53780.3 54.086 257 115 1 140 393 317 573 5.16e-93 292
Msa0414950 AT1G53780.2 54.086 257 115 1 140 393 339 595 7.14e-93 292
Msa0414950 AT1G45000.2 42.510 247 139 1 55 298 29 275 1.10e-66 216
Msa0414950 AT3G53230.1 42.213 244 134 2 155 395 474 713 1.65e-58 204
Msa0414950 AT3G53230.1 44.017 234 125 2 158 388 204 434 3.93e-55 195
Msa0414950 AT5G03340.1 39.446 289 158 5 115 398 439 715 2.35e-57 201
Msa0414950 AT5G03340.1 44.017 234 125 2 158 388 203 433 3.18e-55 195
Msa0414950 AT3G09840.1 44.872 234 123 3 158 388 203 433 7.72e-56 197
Msa0414950 AT3G09840.1 39.310 290 158 6 115 398 439 716 7.88e-56 197
Msa0414950 AT2G30950.1 41.841 239 135 2 159 394 224 461 2.86e-54 191
Msa0414950 AT2G30950.2 41.841 239 135 2 159 394 224 461 2.86e-54 191
Msa0414950 AT2G30950.3 41.841 239 135 2 159 394 224 461 2.86e-54 191
Msa0414950 AT2G30950.4 41.841 239 135 2 159 394 228 465 3.06e-54 191
Msa0414950 AT1G06430.1 41.423 239 136 2 159 394 217 454 8.79e-54 190
Msa0414950 AT1G06430.3 41.423 239 136 2 159 394 217 454 8.79e-54 190
Msa0414950 AT1G06430.2 41.423 239 136 2 159 394 217 454 8.79e-54 190
Msa0414950 AT3G47060.1 44.813 241 126 4 159 393 322 561 2.65e-53 190
Msa0414950 AT5G58870.1 44.033 243 125 5 159 393 326 565 1.54e-51 185
Msa0414950 AT4G23940.1 42.742 248 128 5 159 394 427 672 7.33e-51 184
Msa0414950 AT3G56690.1 39.914 233 136 2 155 384 717 948 1.59e-49 180
Msa0414950 AT3G56690.1 40.404 198 111 2 191 384 413 607 2.43e-41 156
Msa0414950 AT5G15250.1 40.435 230 133 2 159 385 221 449 4.33e-48 174
Msa0414950 AT2G03670.1 39.744 234 137 2 155 384 279 512 1.56e-47 171
Msa0414950 AT2G03670.1 32.780 241 152 4 163 394 23 262 2.59e-31 126
Msa0414950 AT1G07510.1 38.132 257 152 4 144 394 309 564 2.28e-47 173
Msa0414950 AT5G42270.1 40.351 228 132 2 159 383 247 473 7.10e-47 171
Msa0414950 AT2G29080.1 39.370 254 148 3 146 394 306 558 8.24e-47 172
Msa0414950 AT1G50250.1 39.474 228 134 2 159 383 259 485 1.56e-45 167
Msa0414950 AT5G15250.2 36.759 253 133 3 159 385 221 472 1.17e-44 162
Msa0414950 AT3G16290.1 38.961 231 137 2 158 385 406 635 4.00e-44 164
Msa0414950 AT5G53170.1 39.394 231 128 4 155 380 355 578 4.46e-44 164
Msa0414950 AT1G03000.1 37.759 241 142 6 149 383 645 883 5.22e-44 164
Msa0414950 AT3G02450.1 38.866 247 138 4 153 392 325 565 4.94e-43 159
Msa0414950 AT5G64580.1 39.600 250 137 6 146 384 300 546 5.23e-42 158
Msa0414950 AT2G45500.4 37.179 234 133 6 157 383 78 304 6.67e-42 151
Msa0414950 AT2G45500.3 37.179 234 133 6 157 383 78 304 6.67e-42 151
Msa0414950 AT2G45500.1 37.179 234 133 6 157 383 215 441 6.48e-41 152
Msa0414950 AT2G45500.2 37.179 234 133 6 157 383 211 437 6.61e-41 151
Msa0414950 AT2G45500.5 37.179 234 133 6 157 383 221 447 7.24e-41 151
Msa0414950 AT5G08470.3 38.298 235 139 3 152 383 825 1056 8.19e-41 155
Msa0414950 AT5G08470.1 38.298 235 139 3 152 383 834 1065 8.95e-41 155
Msa0414950 AT1G80350.1 36.134 238 136 5 157 383 234 466 6.95e-40 149
Msa0414950 AT2G26140.1 36.975 238 141 4 161 394 226 458 3.90e-39 149
Msa0414950 AT2G34560.1 35.593 236 145 5 157 388 98 330 8.10e-39 144
Msa0414950 AT2G34560.2 35.593 236 145 5 157 388 107 339 9.35e-39 144
Msa0414950 AT3G01610.2 38.865 229 132 5 157 381 523 747 1.38e-38 148
Msa0414950 AT3G01610.2 33.460 263 149 5 143 383 206 464 1.70e-33 133
Msa0414950 AT3G01610.1 38.865 229 132 5 157 381 523 747 1.50e-38 148
Msa0414950 AT3G01610.1 33.460 263 149 5 143 383 206 464 1.99e-33 133
Msa0414950 AT1G05910.1 35.391 243 129 5 158 383 377 608 4.72e-38 147
Msa0414950 AT4G28000.3 35.743 249 152 4 159 403 517 761 1.34e-37 145
Msa0414950 AT4G28000.1 35.743 249 152 4 159 403 515 759 1.36e-37 145
Msa0414950 AT4G28000.2 35.743 249 152 4 159 403 517 761 1.45e-37 145
Msa0414950 AT5G53540.1 36.502 263 147 8 158 412 83 333 1.45e-37 140
Msa0414950 AT2G27600.1 35.983 239 137 7 155 385 125 355 1.97e-37 141
Msa0414950 AT4G27680.1 37.447 235 130 7 158 383 80 306 1.30e-36 138
Msa0414950 AT1G02890.1 37.402 254 137 8 136 383 930 1167 7.88e-36 140
Msa0414950 AT1G64110.5 35.745 235 142 5 154 383 511 741 8.23e-36 140
Msa0414950 AT1G64110.3 35.745 235 142 5 154 383 511 741 8.23e-36 140
Msa0414950 AT1G64110.1 35.745 235 142 5 154 383 508 738 8.84e-36 140
Msa0414950 AT1G64110.2 35.745 235 142 5 154 383 513 743 8.90e-36 140
Msa0414950 AT1G64110.4 35.745 235 142 5 154 383 513 743 8.90e-36 140
Msa0414950 AT4G02480.1 37.402 254 137 8 136 383 949 1186 9.29e-36 140
Msa0414950 AT3G15120.1 35.391 243 143 5 152 384 709 947 9.48e-36 140
Msa0414950 AT3G15120.2 35.391 243 143 5 152 384 719 957 1.08e-35 140
Msa0414950 AT5G52882.1 36.245 229 138 4 159 383 514 738 3.55e-35 138
Msa0414950 AT4G24860.4 36.910 233 135 6 158 383 789 1016 9.68e-35 137
Msa0414950 AT4G24860.1 36.910 233 135 6 158 383 816 1043 9.87e-35 137
Msa0414950 AT4G24860.2 36.910 233 135 6 158 383 812 1039 1.05e-34 137
Msa0414950 AT4G24860.3 36.910 233 135 6 158 383 814 1041 1.11e-34 137
Msa0414950 AT3G27120.1 32.051 234 146 6 157 383 398 625 4.23e-32 129
Msa0414950 AT2G03670.2 32.780 241 152 4 163 394 23 262 4.30e-32 126
Msa0414950 AT2G03670.2 41.096 146 85 1 155 299 279 424 7.18e-29 117
Msa0414950 AT4G04180.2 36.404 228 131 5 158 376 310 532 8.76e-31 124
Msa0414950 AT4G04180.1 36.404 228 131 5 158 376 315 537 1.02e-30 124
Msa0414950 AT1G79560.2 37.619 210 110 5 197 392 527 729 2.66e-30 124
Msa0414950 AT1G79560.3 37.619 210 110 5 197 392 527 729 2.88e-30 124
Msa0414950 AT1G79560.1 37.619 210 110 5 197 392 527 729 3.58e-30 123
Msa0414950 AT1G50140.2 31.301 246 154 6 159 398 689 925 7.02e-30 122
Msa0414950 AT1G50140.5 31.301 246 154 6 159 398 689 925 7.02e-30 122
Msa0414950 AT1G50140.3 31.301 246 154 6 159 398 711 947 7.03e-30 122
Msa0414950 AT1G50140.1 31.301 246 154 6 159 398 711 947 7.03e-30 122
Msa0414950 AT1G50140.4 31.301 246 154 6 159 398 711 947 7.03e-30 122
Msa0414950 AT3G19740.1 32.035 231 147 5 159 383 701 927 4.01e-29 120
Msa0414950 AT4G04910.1 34.286 210 121 5 190 383 244 452 2.04e-28 118
Msa0414950 AT1G62130.1 29.630 351 211 12 40 376 629 957 1.29e-25 110
Msa0414950 AT1G62130.2 29.630 351 211 12 40 376 622 950 1.44e-25 110
Msa0414950 AT5G08470.2 36.943 157 96 1 152 308 834 987 8.79e-24 104
Msa0414950 AT3G04340.1 31.132 212 139 6 151 357 773 982 4.52e-21 96.7
Msa0414950 AT1G02890.2 31.890 254 123 9 136 383 930 1139 5.08e-20 93.2
Msa0414950 AT2G18193.1 34.356 163 94 6 171 328 218 372 3.25e-15 77.8
Msa0414950 AT2G18330.1 33.793 145 88 5 195 338 384 521 3.12e-14 75.1
Msa0414950 AT4G36580.1 35.000 140 83 5 195 333 381 513 5.90e-14 74.3
Msa0414950 AT5G17740.1 29.268 205 126 6 160 353 209 405 6.61e-14 73.9
Msa0414950 AT3G28600.1 30.682 176 98 5 170 329 212 379 1.58e-13 72.4
Msa0414950 AT3G28600.2 30.682 176 98 5 170 329 173 340 1.68e-13 72.4
Msa0414950 AT2G18190.1 31.928 166 97 4 171 328 219 376 4.20e-13 71.2
Msa0414950 AT5G17760.1 28.571 203 121 5 160 350 217 407 9.34e-13 70.1
Msa0414950 AT1G43910.1 31.481 162 84 5 186 328 229 382 1.65e-12 69.3
Msa0414950 AT4G24710.4 30.769 143 79 4 187 309 200 342 3.20e-12 67.8
Msa0414950 AT4G24710.2 30.769 143 79 4 187 309 200 342 3.20e-12 67.8
Msa0414950 AT5G16930.1 31.361 169 100 7 195 362 397 550 4.26e-12 68.6
Msa0414950 AT5G17750.1 29.442 197 113 7 146 328 168 352 1.23e-11 66.2
Msa0414950 AT3G50940.1 26.042 192 125 6 187 370 238 420 1.25e-11 66.6
Msa0414950 AT5G17730.1 32.667 150 87 6 186 329 235 376 1.46e-11 66.2

Find 131 sgRNAs with CRISPR-Local

Find 411 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTTATCTCCAAATGTTTA+AGG 0.164113 3_2:+60911118 Msa0414950:three_prime_UTR
TTCATCACTCAAATTCATTT+TGG 0.169004 3_2:-60910143 None:intergenic
AAGACGGTGATTAGAGAATT+TGG 0.176439 3_2:-60905337 None:intergenic
GGTTTCGGTGTTGTGGGATT+TGG 0.199289 3_2:-60905307 None:intergenic
GATTAGAGAATTTGGGAATT+AGG 0.201424 3_2:-60905329 None:intergenic
GGTGGTTCGGTGAGGGGTTT+TGG 0.215133 3_2:-60905392 None:intergenic
GCTTGTGATCGGTCAGTTTA+TGG 0.222132 3_2:+60905613 Msa0414950:CDS
CCTCACGAATTTCCTGCTTT+TGG 0.258382 3_2:-60907085 None:intergenic
AGATCCAACAATCCCGTTAT+TGG 0.259411 3_2:-60905648 None:intergenic
AGAATAACATAGTTGTATTA+TGG 0.263437 3_2:+60911169 Msa0414950:three_prime_UTR
GTTTCGGTGTTGTGGGATTT+GGG 0.266518 3_2:-60905306 None:intergenic
TTGTTTGATTATTTCATATA+TGG 0.273312 3_2:+60911068 Msa0414950:three_prime_UTR
ATTAGAGAATTTGGGAATTA+GGG 0.282115 3_2:-60905328 None:intergenic
TTCTCTATCAGCTCCGGTTT+GGG 0.296427 3_2:-60908751 None:intergenic
CCTGAAATACAAGCCTCTTT+TGG 0.301281 3_2:-60909133 None:intergenic
ACAAGATTTCCTTAAACATT+TGG 0.319263 3_2:-60911127 None:intergenic
CACGAGCTATACAAACAAAT+TGG 0.338056 3_2:+60907131 Msa0414950:CDS
AAATAATTCCATTACATAAC+AGG 0.340543 3_2:-60911012 None:intergenic
AGACGGTGATTAGAGAATTT+GGG 0.345290 3_2:-60905336 None:intergenic
TGCTGCTTTCATCAGGGTTG+TGG 0.346438 3_2:+60907241 Msa0414950:CDS
AAACACATCACGAACCATTC+GGG 0.352078 3_2:-60908652 None:intergenic
GGAGGAGGAATCGGTGTCGG+TGG 0.352501 3_2:-60905438 None:intergenic
CTTCTCTATCAGCTCCGGTT+TGG 0.355197 3_2:-60908752 None:intergenic
ATACCACTGCTGCTTTCATC+AGG 0.361269 3_2:+60907234 Msa0414950:CDS
AGGACTTTGAGAAAGGTTAT+AGG 0.368020 3_2:+60910815 Msa0414950:CDS
GAAGGTGGTGGTTCGGTGAG+GGG 0.372022 3_2:-60905398 None:intergenic
AATTAGGGTTTCGGTGTTGT+GGG 0.381272 3_2:-60905313 None:intergenic
GGAGGAATCGGTGTCGGTGG+GGG 0.382146 3_2:-60905435 None:intergenic
TTGACTAAGAAGCGAGATAC+TGG 0.386344 3_2:-60905801 None:intergenic
GGTGTTGTGGGATTTGGGAT+TGG 0.388014 3_2:-60905301 None:intergenic
TCATCGATAAATATAATTGC+AGG 0.388188 3_2:-60908696 None:intergenic
GCTGCTTTCATCAGGGTTGT+GGG 0.388279 3_2:+60907242 Msa0414950:CDS
GGCGGGAAACATAATCTTCC+AGG 0.395124 3_2:-60910171 None:intergenic
GATCCTGCCCTCTTGCGTCC+TGG 0.401876 3_2:+60909068 Msa0414950:CDS
CATTATGACTTTAACATTCA+CGG 0.404355 3_2:-60909021 None:intergenic
CGTGAATGTTAAAGTCATAA+TGG 0.406502 3_2:+60909022 Msa0414950:CDS
GAATTTGGGAATTAGGGTTT+CGG 0.409468 3_2:-60905322 None:intergenic
GAAACACATCACGAACCATT+CGG 0.419127 3_2:-60908653 None:intergenic
TAACCTTTCTCAAAGTCCTT+TGG 0.419151 3_2:-60910811 None:intergenic
GAGGAGAAAGAAAGGGAAGG+TGG 0.419318 3_2:-60905413 None:intergenic
GAGTTTGTGCAGAAGTATCT+TGG 0.426306 3_2:+60907269 Msa0414950:CDS
TAATCAAACAAGCAGGTATT+CGG 0.427456 3_2:-60911056 None:intergenic
TGAATTCGAGTTGGCGTTGG+AGG 0.434349 3_2:-60905493 None:intergenic
GGGAAGGTGGTGGTTCGGTG+AGG 0.438745 3_2:-60905400 None:intergenic
TACATTTCTGGAGTAATTGT+GGG 0.439355 3_2:+60910944 Msa0414950:three_prime_UTR
GTCGGAGGTGGAGGAGGAAT+CGG 0.439640 3_2:-60905447 None:intergenic
GAATTAGGGTTTCGGTGTTG+TGG 0.440948 3_2:-60905314 None:intergenic
GTAAAATTCAAAGTCAGTAT+CGG 0.445770 3_2:-60910854 None:intergenic
TAAAATTCAAAGTCAGTATC+GGG 0.446190 3_2:-60910853 None:intergenic
AGTGTAGAGGTCGTCGGAGG+TGG 0.449340 3_2:-60905459 None:intergenic
GAGGAGGAATCGGTGTCGGT+GGG 0.454250 3_2:-60905437 None:intergenic
GTTGGCGTTGGAGGGATTTG+AGG 0.454459 3_2:-60905484 None:intergenic
GAGATACTGGAATCAGCTTC+CGG 0.455701 3_2:-60905788 None:intergenic
GATACCAATAACGGGATTGT+TGG 0.456797 3_2:+60905644 Msa0414950:CDS
TGACTTTAACATTCACGGTC+TGG 0.457053 3_2:-60909016 None:intergenic
AGGAGGAATCGGTGTCGGTG+GGG 0.459912 3_2:-60905436 None:intergenic
CTTATTTGTTTGTGTACGTA+CGG 0.461422 3_2:+60910897 Msa0414950:three_prime_UTR
GTAGAGGTCGTCGGAGGTGG+AGG 0.461719 3_2:-60905456 None:intergenic
GGAAGGTGGTGGTTCGGTGA+GGG 0.462453 3_2:-60905399 None:intergenic
CGATGAATTCGAGTTGGCGT+TGG 0.468102 3_2:-60905496 None:intergenic
CTACCAAAGGACTTTGAGAA+AGG 0.468426 3_2:+60910808 Msa0414950:CDS
ACGCGAGCTTCTTCGTGCTC+AGG 0.470975 3_2:+60905562 Msa0414950:CDS
CTAATCACCGTCTTCAACCA+TGG 0.472662 3_2:+60905346 Msa0414950:exon
AGAAAGGGAAGGTGGTGGTT+CGG 0.487115 3_2:-60905405 None:intergenic
TTACATTTCTGGAGTAATTG+TGG 0.492769 3_2:+60910943 Msa0414950:three_prime_UTR
GGTATGATTAGCAACAGCTT+TGG 0.495289 3_2:-60907216 None:intergenic
GCTAGATTTGATGCCCAAAC+CGG 0.497124 3_2:+60908738 Msa0414950:CDS
AACCATGGGTTCCTCCGCGA+TGG 0.502713 3_2:+60905361 Msa0414950:exon
CTTCCAGGACGCAAGAGGGC+AGG 0.504188 3_2:-60909071 None:intergenic
GAGGTCGTCGGAGGTGGAGG+AGG 0.504703 3_2:-60905453 None:intergenic
CGATCACAAGCGGAACAGAT+TGG 0.506443 3_2:-60905601 None:intergenic
TTTGGAGATAACAGTACCAT+TGG 0.508346 3_2:-60911109 None:intergenic
GGGATTGTTGGATCTACGAC+TGG 0.509839 3_2:+60905656 Msa0414950:CDS
CTGGGTCGAATTACTATGTC+AGG 0.510656 3_2:+60905675 Msa0414950:CDS
CTGTACTTCTCTATCAGCTC+CGG 0.516937 3_2:-60908757 None:intergenic
AACAAATCGTGCAGACACTT+TGG 0.518337 3_2:+60909046 Msa0414950:CDS
TTGATTATTTCATATATGGT+AGG 0.521075 3_2:+60911072 Msa0414950:three_prime_UTR
GCAGGAAATTCGTGAGGCTG+TGG 0.521953 3_2:+60907091 Msa0414950:CDS
GAATTCGAGTTGGCGTTGGA+GGG 0.523311 3_2:-60905492 None:intergenic
CAATCTGTTCCGCTTGTGAT+CGG 0.526522 3_2:+60905602 Msa0414950:CDS
GAGATGGTTGATACCAATAA+CGG 0.529111 3_2:+60905635 Msa0414950:CDS
AGATGGTTGATACCAATAAC+GGG 0.529335 3_2:+60905636 Msa0414950:CDS
TCTGCTATTTGTCAAGAAGC+AGG 0.531504 3_2:+60910751 Msa0414950:CDS
TGCCTGATAGACGCCAAAAG+AGG 0.531552 3_2:+60909120 Msa0414950:CDS
TCTTGTTGATGTTCTTCCAC+CGG 0.532236 3_2:+60905769 Msa0414950:CDS
AATGAATTTGAGTGATGAAG+TGG 0.534248 3_2:+60910147 Msa0414950:CDS
CATCGATAAATATAATTGCA+GGG 0.545604 3_2:-60908695 None:intergenic
GAGAAAGAAAGGGAAGGTGG+TGG 0.548682 3_2:-60905410 None:intergenic
TGCAATTATATTTATCGATG+AGG 0.551043 3_2:+60908698 Msa0414950:CDS
CTAACATTATAAGTAACATC+AGG 0.552119 3_2:-60905833 None:intergenic
AGAAGTACAGCGTATCCTCA+TGG 0.552905 3_2:+60908770 Msa0414950:CDS
AACCATCGCGGAGGAACCCA+TGG 0.553976 3_2:-60905363 None:intergenic
GGTGGAGGAGGAATCGGTGT+CGG 0.555347 3_2:-60905441 None:intergenic
TTTGGCGTCTATCAGGCAAA+GGG 0.557869 3_2:-60909115 None:intergenic
TATGAAATAATCAAACAAGC+AGG 0.566680 3_2:-60911063 None:intergenic
GGGATTTGAGGAGAGTGTAG+AGG 0.570748 3_2:-60905472 None:intergenic
GTGCTCAGGAAGAAGTCAAA+CGG 0.571701 3_2:+60905576 Msa0414950:CDS
AGGATGTGATATCCAAAAGC+AGG 0.572198 3_2:+60907073 Msa0414950:CDS
GATCGGTCAGTTTATGGAGA+TGG 0.573018 3_2:+60905619 Msa0414950:CDS
TAATCACCGTCTTCAACCAT+GGG 0.580633 3_2:+60905347 Msa0414950:exon
TGACAAAATTAGTGCTGCTG+AGG 0.584034 3_2:+60910195 Msa0414950:CDS
TACCACTGCTGCTTTCATCA+GGG 0.587666 3_2:+60907235 Msa0414950:CDS
GAGGAGAGTGTAGAGGTCGT+CGG 0.588851 3_2:-60905465 None:intergenic
AAGATACTTCTGCACAAACT+CGG 0.590374 3_2:-60907267 None:intergenic
GTATGTCGATGAATTCGAGT+TGG 0.591537 3_2:-60905502 None:intergenic
CAAGTCTTCCAGGACGCAAG+AGG 0.595014 3_2:-60909076 None:intergenic
TATATTTCAGGGTCCCCGAA+TGG 0.596230 3_2:+60908638 Msa0414950:intron
TATAGCTCGTGATGCGTGAG+AGG 0.600851 3_2:-60907119 None:intergenic
TAGATATGTCATACTACCAA+AGG 0.601083 3_2:+60910795 Msa0414950:CDS
AGTATCGGGCTTCTTCACAT+TGG 0.603811 3_2:-60910839 None:intergenic
ATCGATAAATATAATTGCAG+GGG 0.614874 3_2:-60908694 None:intergenic
GATGAAAAGTATGCAAGAGT+CGG 0.616686 3_2:-60910990 None:intergenic
TTTGAGTGATGAAGTGGACC+TGG 0.618848 3_2:+60910153 Msa0414950:CDS
ATAAACTGACCGATCACAAG+CGG 0.619421 3_2:-60905611 None:intergenic
GAAGTATATGGAATGAAGTG+AGG 0.621014 3_2:-60905264 None:intergenic
GGGGAGGAGAAAGAAAGGGA+AGG 0.627914 3_2:-60905416 None:intergenic
AACCCTGATGAAAGCAGCAG+TGG 0.632358 3_2:-60907237 None:intergenic
GAGGAACCCATGGTTGAAGA+CGG 0.635930 3_2:-60905353 None:intergenic
TGAAGCGCAACCGAAGCCGA+CGG 0.638323 3_2:-60905731 None:intergenic
AAGTCTTCCAGGACGCAAGA+GGG 0.648990 3_2:-60909075 None:intergenic
TGTGCAGAAGTATCTTGGAG+AGG 0.651686 3_2:+60907274 Msa0414950:CDS
GAGAGTGTAGAGGTCGTCGG+AGG 0.667816 3_2:-60905462 None:intergenic
AACACATCACGAACCATTCG+GGG 0.667959 3_2:-60908651 None:intergenic
TATAGTAAAACACCTCGAGG+TGG 0.670491 3_2:-60907161 None:intergenic
ATACTGGAATCAGCTTCCGG+TGG 0.671138 3_2:-60905785 None:intergenic
CCAAAAGCAGGAAATTCGTG+AGG 0.677845 3_2:+60907085 Msa0414950:CDS
GGATTGTTGGATCTACGACT+GGG 0.682041 3_2:+60905657 Msa0414950:CDS
CCATATAGTAAAACACCTCG+AGG 0.699181 3_2:-60907164 None:intergenic
CCTGATTCAAAAGTTCCATG+AGG 0.723398 3_2:-60908785 None:intergenic
TGGATCGAGAACCATCGCGG+AGG 0.728264 3_2:-60905372 None:intergenic
ATTGGTATTGATCCACCTCG+AGG 0.734273 3_2:+60907149 Msa0414950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTCGTAATTTTTTTTAT+TGG + chr3_2:60905866-60905885 Msa0414950:intron 10.0%
!!! TTTTCGTAATTTTTTTTATT+GGG + chr3_2:60905867-60905886 Msa0414950:intron 10.0%
!!! TTTTGTATATATTTCTAATT+TGG + chr3_2:60905996-60906015 Msa0414950:intron 10.0%
!!! TTTGTATATATTTCTAATTT+GGG + chr3_2:60905997-60906016 Msa0414950:intron 10.0%
!!! AATTATAGTATTTTTGATTT+TGG + chr3_2:60906254-60906273 Msa0414950:intron 10.0%
!! TTTATCATATATACTTTATT+GGG + chr3_2:60907432-60907451 Msa0414950:intron 10.0%
!!! TAAACTTTTTTTTTATTAGA+TGG + chr3_2:60908983-60909002 Msa0414950:intron 10.0%
!!! TCTTTTTTCATAATTTTTAT+GGG - chr3_2:60909493-60909512 None:intergenic 10.0%
!!! TTCTTTTTTCATAATTTTTA+TGG - chr3_2:60909494-60909513 None:intergenic 10.0%
!! TAAAATCATATTTAGATCTA+GGG - chr3_2:60906226-60906245 None:intergenic 15.0%
!! ATATTTAAACCATTAAAGAT+TGG + chr3_2:60906603-60906622 Msa0414950:intron 15.0%
!!! CATTTTAAACTATATTTTTG+TGG + chr3_2:60907002-60907021 Msa0414950:intron 15.0%
!! GTTTATCATATATACTTTAT+TGG + chr3_2:60907431-60907450 Msa0414950:intron 15.0%
!!! TTATCTACATTTCTAAAAAT+AGG + chr3_2:60907559-60907578 Msa0414950:intron 15.0%
!! TATAAAAATCAGTTAGTTAA+AGG - chr3_2:60907801-60907820 None:intergenic 15.0%
!!! TTTTATGACATTTTTGTAAT+AGG + chr3_2:60908061-60908080 Msa0414950:intron 15.0%
!! ATTTAAATTATCCAATATGT+CGG - chr3_2:60908220-60908239 None:intergenic 15.0%
!! ATAATTTAAATCAAGAAGAT+TGG + chr3_2:60908229-60908248 Msa0414950:intron 15.0%
!!! AGTATAAAATTTCACTTTTT+AGG - chr3_2:60908387-60908406 None:intergenic 15.0%
!!! TTTTCTTTCATTTATATTTC+AGG + chr3_2:60908626-60908645 Msa0414950:intron 15.0%
!! TTTCTTTCATTTATATTTCA+GGG + chr3_2:60908627-60908646 Msa0414950:intron 15.0%
!!! TTGTTTAATTTAATTACGTT+TGG + chr3_2:60909776-60909795 Msa0414950:intron 15.0%
!! GTAAAAAATATTCAAATTCA+TGG - chr3_2:60910271-60910290 None:intergenic 15.0%
!! TTGTTTGATTATTTCATATA+TGG + chr3_2:60911068-60911087 Msa0414950:three_prime_UTR 15.0%
!! TTTATTGAATTGCTAAATCT+AGG + chr3_2:60905897-60905916 Msa0414950:intron 20.0%
!! TTATTGAATTGCTAAATCTA+GGG + chr3_2:60905898-60905917 Msa0414950:intron 20.0%
!!! TAATTTGGGATTTGATTATT+AGG + chr3_2:60906011-60906030 Msa0414950:intron 20.0%
!! CTAAAATCATATTTAGATCT+AGG - chr3_2:60906227-60906246 None:intergenic 20.0%
!! ATCAAAAATACTATAATTGC+AGG - chr3_2:60906252-60906271 None:intergenic 20.0%
!!! AGCAATTATAGTGTTTTTTT+GGG - chr3_2:60906437-60906456 None:intergenic 20.0%
!!! AAGCAATTATAGTGTTTTTT+TGG - chr3_2:60906438-60906457 None:intergenic 20.0%
!! TGAAAAATGTTGAGTTTATT+TGG + chr3_2:60906707-60906726 Msa0414950:intron 20.0%
!! GAAAAATGTTGAGTTTATTT+GGG + chr3_2:60906708-60906727 Msa0414950:intron 20.0%
!!! TATGCTAAATTATTGATTCT+AGG + chr3_2:60906893-60906912 Msa0414950:intron 20.0%
!!! ATGCTAAATTATTGATTCTA+GGG + chr3_2:60906894-60906913 Msa0414950:intron 20.0%
!! GTATATATGATAAACCTTTA+CGG - chr3_2:60907426-60907445 None:intergenic 20.0%
!! AATAGCATAAATATCAATAC+TGG - chr3_2:60907608-60907627 None:intergenic 20.0%
!! ATATGTTAGGAAAAGATATA+GGG - chr3_2:60908100-60908119 None:intergenic 20.0%
!! TATATGTTAGGAAAAGATAT+AGG - chr3_2:60908101-60908120 None:intergenic 20.0%
!!! ATATCTTTTCCTAACATATA+AGG + chr3_2:60908101-60908120 Msa0414950:intron 20.0%
!!! TTTTTGTCAGTTAATACTAA+AGG - chr3_2:60908269-60908288 None:intergenic 20.0%
!!! AAATCTTGACTTTTTTTAAC+CGG + chr3_2:60908460-60908479 Msa0414950:intron 20.0%
!! TGAAAGAAAAGATTACAAAA+TGG - chr3_2:60908616-60908635 None:intergenic 20.0%
!! TGAATCAGGTATAAAAAAAA+AGG + chr3_2:60908799-60908818 Msa0414950:intron 20.0%
!! GAATCAGGTATAAAAAAAAA+GGG + chr3_2:60908800-60908819 Msa0414950:intron 20.0%
!! AATCAGGTATAAAAAAAAAG+GGG + chr3_2:60908801-60908820 Msa0414950:intron 20.0%
!!! CTTTTTTTTTATTAGATGGA+CGG + chr3_2:60908987-60909006 Msa0414950:intron 20.0%
!!! TTTTAACTGTTCTATCAATT+TGG - chr3_2:60909289-60909308 None:intergenic 20.0%
!! TAAAAAAAACTGAACTGAAT+TGG + chr3_2:60909304-60909323 Msa0414950:intron 20.0%
!! TTGTAAAAAACCAAATGTAA+TGG + chr3_2:60909540-60909559 Msa0414950:intron 20.0%
!! ATAAAATGACCTATTATTAG+GGG - chr3_2:60909993-60910012 None:intergenic 20.0%
!! CATAAAATGACCTATTATTA+GGG - chr3_2:60909994-60910013 None:intergenic 20.0%
!! ACATAAAATGACCTATTATT+AGG - chr3_2:60909995-60910014 None:intergenic 20.0%
!!! TTTTTTTTGCAAACTTTTAG+TGG + chr3_2:60910036-60910055 Msa0414950:intron 20.0%
!!! ATGATTTATTTGATGATTGT+TGG + chr3_2:60910717-60910736 Msa0414950:intron 20.0%
!! AAATAATTCCATTACATAAC+AGG - chr3_2:60911015-60911034 None:intergenic 20.0%
!! TTGATTATTTCATATATGGT+AGG + chr3_2:60911072-60911091 Msa0414950:three_prime_UTR 20.0%
!! AGAATAACATAGTTGTATTA+TGG + chr3_2:60911169-60911188 Msa0414950:three_prime_UTR 20.0%
! ATTAGAGAATTTGGGAATTA+GGG - chr3_2:60905331-60905350 None:intergenic 25.0%
! CTAACATTATAAGTAACATC+AGG - chr3_2:60905836-60905855 None:intergenic 25.0%
! TAGTTTACAACTGTAATTGA+AGG - chr3_2:60905941-60905960 None:intergenic 25.0%
!! GTTGTAAACTATTGATTGTT+AGG + chr3_2:60905950-60905969 Msa0414950:intron 25.0%
! GGATTTGATTATTAGGTTTA+GGG + chr3_2:60906018-60906037 Msa0414950:intron 25.0%
! CATAAGTTGTTTATCCAAAT+AGG + chr3_2:60906155-60906174 Msa0414950:intron 25.0%
! TACTCTGAATTTATCCAAAT+AGG + chr3_2:60906200-60906219 Msa0414950:intron 25.0%
!!! TGCTAAATTATTGATTCTAG+GGG + chr3_2:60906895-60906914 Msa0414950:intron 25.0%
!!! ATATGGTTTTGATCTCTTTT+AGG + chr3_2:60907043-60907062 Msa0414950:intron 25.0%
!!! TTTGATCTCTTTTAGGATAT+TGG + chr3_2:60907050-60907069 Msa0414950:intron 25.0%
!! ATTTTGTATCGCTTCTATAA+GGG - chr3_2:60907518-60907537 None:intergenic 25.0%
!! TATTTTGTATCGCTTCTATA+AGG - chr3_2:60907519-60907538 None:intergenic 25.0%
! ATTCTATGTACTAGAGAATA+GGG - chr3_2:60907635-60907654 None:intergenic 25.0%
! AATTCTATGTACTAGAGAAT+AGG - chr3_2:60907636-60907655 None:intergenic 25.0%
! ATTCTCTAGTACATAGAATT+TGG + chr3_2:60907636-60907655 Msa0414950:intron 25.0%
!!! TTTTTTTAACCGGATTTCAT+TGG + chr3_2:60908470-60908489 Msa0414950:intron 25.0%
! ATCGATAAATATAATTGCAG+GGG - chr3_2:60908697-60908716 None:intergenic 25.0%
! CATCGATAAATATAATTGCA+GGG - chr3_2:60908698-60908717 None:intergenic 25.0%
! TCATCGATAAATATAATTGC+AGG - chr3_2:60908699-60908718 None:intergenic 25.0%
! TGCAATTATATTTATCGATG+AGG + chr3_2:60908698-60908717 Msa0414950:CDS 25.0%
! TATAGGACATTAAATCAATG+TGG - chr3_2:60908907-60908926 None:intergenic 25.0%
! CATTATGACTTTAACATTCA+CGG - chr3_2:60909024-60909043 None:intergenic 25.0%
!! CCTATTATTGACTATAAACA+TGG - chr3_2:60909219-60909238 None:intergenic 25.0%
! CCATGTTTATAGTCAATAAT+AGG + chr3_2:60909216-60909235 Msa0414950:intron 25.0%
!!! TTTTCAAATCTATGTTGGTT+CGG - chr3_2:60909393-60909412 None:intergenic 25.0%
!!! TCAGTTCTAATTTGGATTTT+AGG + chr3_2:60909712-60909731 Msa0414950:intron 25.0%
!!! CAGTTCTAATTTGGATTTTA+GGG + chr3_2:60909713-60909732 Msa0414950:intron 25.0%
!!! CTCTTTGATTAGTGATTTTT+TGG + chr3_2:60909736-60909755 Msa0414950:intron 25.0%
!!! TTTTTTGGTTCTCTAATGTT+AGG + chr3_2:60909751-60909770 Msa0414950:intron 25.0%
!!! TTGGTTTTAAGAATTTGTGA+TGG + chr3_2:60909811-60909830 Msa0414950:intron 25.0%
! TTTAAGAATTTGTGATGGTT+TGG + chr3_2:60909816-60909835 Msa0414950:intron 25.0%
!! CGGTTTTCAATATTATAAAC+CGG + chr3_2:60909908-60909927 Msa0414950:intron 25.0%
! AAAAAACCATAAAACCAAAC+TGG - chr3_2:60909964-60909983 None:intergenic 25.0%
!! TTTTTAACACCCCTAATAAT+AGG + chr3_2:60909981-60910000 Msa0414950:intron 25.0%
! CAAGTGAACTATCAAATAAT+AGG - chr3_2:60910107-60910126 None:intergenic 25.0%
!! TTCATCACTCAAATTCATTT+TGG - chr3_2:60910146-60910165 None:intergenic 25.0%
! AAGACTATTAATAACTTACC+CGG + chr3_2:60910340-60910359 Msa0414950:intron 25.0%
! TAAGGAAATATTAGATTGCT+TGG + chr3_2:60910581-60910600 Msa0414950:intron 25.0%
!! AGACAAATTTCTAAAAGGTT+TGG - chr3_2:60910691-60910710 None:intergenic 25.0%
! AATGCAGACAAATTTCTAAA+AGG - chr3_2:60910696-60910715 None:intergenic 25.0%
! TAAAATTCAAAGTCAGTATC+GGG - chr3_2:60910856-60910875 None:intergenic 25.0%
! GTAAAATTCAAAGTCAGTAT+CGG - chr3_2:60910857-60910876 None:intergenic 25.0%
!!! TGCAGAATACATAGTTTTAA+TGG + chr3_2:60910920-60910939 Msa0414950:three_prime_UTR 25.0%
!!! AGTTTTAATGGTTACATTTC+TGG + chr3_2:60910932-60910951 Msa0414950:three_prime_UTR 25.0%
! TATGAAATAATCAAACAAGC+AGG - chr3_2:60911066-60911085 None:intergenic 25.0%
! GGAAAACTTATAAAAACCAA+TGG + chr3_2:60911093-60911112 Msa0414950:three_prime_UTR 25.0%
! ACAAGATTTCCTTAAACATT+TGG - chr3_2:60911130-60911149 None:intergenic 25.0%
!! TTGCTTTTAGGTGAAGTATA+TGG - chr3_2:60905279-60905298 None:intergenic 30.0%
GATTAGAGAATTTGGGAATT+AGG - chr3_2:60905332-60905351 None:intergenic 30.0%
!! GGATTTTGAGTACGATTAAT+CGG + chr3_2:60905696-60905715 Msa0414950:CDS 30.0%
!! GATTTTGAGTACGATTAATC+GGG + chr3_2:60905697-60905716 Msa0414950:CDS 30.0%
! ATTGATTGTTAGGTTAGTTG+CGG + chr3_2:60905960-60905979 Msa0414950:intron 30.0%
GGGATTTGATTATTAGGTTT+AGG + chr3_2:60906017-60906036 Msa0414950:intron 30.0%
!!! ATTGCTTTTAGTCTTGATGT+TGG + chr3_2:60906324-60906343 Msa0414950:intron 30.0%
! GCCACATAGTATGATTTTAT+CGG + chr3_2:60906355-60906374 Msa0414950:intron 30.0%
! CCACATAGTATGATTTTATC+GGG + chr3_2:60906356-60906375 Msa0414950:intron 30.0%
GTCATTGTCTCAAAATTTAG+CGG - chr3_2:60906492-60906511 None:intergenic 30.0%
TAAACCATTAAAGATTGGAG+TGG + chr3_2:60906608-60906627 Msa0414950:intron 30.0%
TGAACTATATTTGTAACCTC+AGG - chr3_2:60906868-60906887 None:intergenic 30.0%
! TACGTTGAAACTGAAAGTAT+AGG + chr3_2:60906931-60906950 Msa0414950:intron 30.0%
! TGAAAGTATAGGTCATTATG+AGG + chr3_2:60906942-60906961 Msa0414950:intron 30.0%
AGAGATCAAAACCATATCAA+GGG - chr3_2:60907040-60907059 None:intergenic 30.0%
AAGAGATCAAAACCATATCA+AGG - chr3_2:60907041-60907060 None:intergenic 30.0%
GCACAGTAATATTGAAAGTT+AGG - chr3_2:60907388-60907407 None:intergenic 30.0%
CTTTCCATGAAATAAGAAGA+CGG - chr3_2:60907879-60907898 None:intergenic 30.0%
GGCAATTTCAATTGGAAAAA+GGG - chr3_2:60907946-60907965 None:intergenic 30.0%
AGGCAATTTCAATTGGAAAA+AGG - chr3_2:60907947-60907966 None:intergenic 30.0%
CTGTATAGATATTTGAGTGA+CGG + chr3_2:60907996-60908015 Msa0414950:intron 30.0%
! AGTGCTATTCCTTATATGTT+AGG - chr3_2:60908113-60908132 None:intergenic 30.0%
ATCTGATTATCATAATGTGG+CGG - chr3_2:60908342-60908361 None:intergenic 30.0%
TGCATCTGATTATCATAATG+TGG - chr3_2:60908345-60908364 None:intergenic 30.0%
!! ATTTTTCAAATTCGAAGTCC+AGG - chr3_2:60908444-60908463 None:intergenic 30.0%
!!! TAATGAGTTTTGAAACTCTG+AGG - chr3_2:60908548-60908567 None:intergenic 30.0%
AAAAAAAGGGGCAGTTTATT+AGG + chr3_2:60908813-60908832 Msa0414950:intron 30.0%
!! GAGAGTATTTAAAACAAGAG+CGG - chr3_2:60908951-60908970 None:intergenic 30.0%
TTAAATACTCTCTGATGTTC+TGG + chr3_2:60908959-60908978 Msa0414950:intron 30.0%
CGTGAATGTTAAAGTCATAA+TGG + chr3_2:60909022-60909041 Msa0414950:CDS 30.0%
ACTGTTCTATCAATTTGGTT+TGG - chr3_2:60909284-60909303 None:intergenic 30.0%
GAACCAACATAGATTTGAAA+AGG + chr3_2:60909392-60909411 Msa0414950:intron 30.0%
! TCTCCTTTTCAAATCTATGT+TGG - chr3_2:60909398-60909417 None:intergenic 30.0%
!! TTATCTGCTTTTGCTTTGAT+GGG - chr3_2:60909468-60909487 None:intergenic 30.0%
!! TTTATCTGCTTTTGCTTTGA+TGG - chr3_2:60909469-60909488 None:intergenic 30.0%
! ACAATGCTTCAGTTCTAATT+TGG + chr3_2:60909704-60909723 Msa0414950:intron 30.0%
! TATTTGAAACTGGAACCAAA+CGG - chr3_2:60909850-60909869 None:intergenic 30.0%
TGGTTCCAGTTTCAAATAAA+TGG + chr3_2:60909852-60909871 Msa0414950:intron 30.0%
! TTTGATAGTTCACTTGTAAC+AGG + chr3_2:60910111-60910130 Msa0414950:intron 30.0%
AATGAATTTGAGTGATGAAG+TGG + chr3_2:60910147-60910166 Msa0414950:CDS 30.0%
TTATAAACCTCACAAGATGA+TGG - chr3_2:60910319-60910338 None:intergenic 30.0%
AGACTATTAATAACTTACCC+GGG + chr3_2:60910341-60910360 Msa0414950:intron 30.0%
AATCTGTCACAGTAATGAAA+AGG + chr3_2:60910386-60910405 Msa0414950:intron 30.0%
GTTTCTCATGAACTGAAAAT+TGG + chr3_2:60910425-60910444 Msa0414950:intron 30.0%
TAGATATGTCATACTACCAA+AGG + chr3_2:60910795-60910814 Msa0414950:CDS 30.0%
!! AATTTTACAAGTGATGACGA+GGG + chr3_2:60910869-60910888 Msa0414950:exon 30.0%
CTTATTTGTTTGTGTACGTA+CGG + chr3_2:60910897-60910916 Msa0414950:three_prime_UTR 30.0%
!! TTACATTTCTGGAGTAATTG+TGG + chr3_2:60910943-60910962 Msa0414950:three_prime_UTR 30.0%
!! TACATTTCTGGAGTAATTGT+GGG + chr3_2:60910944-60910963 Msa0414950:three_prime_UTR 30.0%
! CTTTTCATCCTGTTATGTAA+TGG + chr3_2:60911004-60911023 Msa0414950:three_prime_UTR 30.0%
TAATCAAACAAGCAGGTATT+CGG - chr3_2:60911059-60911078 None:intergenic 30.0%
CTGTTATCTCCAAATGTTTA+AGG + chr3_2:60911118-60911137 Msa0414950:three_prime_UTR 30.0%
GAAGTATATGGAATGAAGTG+AGG - chr3_2:60905267-60905286 None:intergenic 35.0%
!! TTGGGATTGGAATTGCTTTT+AGG - chr3_2:60905291-60905310 None:intergenic 35.0%
GAATTTGGGAATTAGGGTTT+CGG - chr3_2:60905325-60905344 None:intergenic 35.0%
AGACGGTGATTAGAGAATTT+GGG - chr3_2:60905339-60905358 None:intergenic 35.0%
AAGACGGTGATTAGAGAATT+TGG - chr3_2:60905340-60905359 None:intergenic 35.0%
! GAGATGGTTGATACCAATAA+CGG + chr3_2:60905635-60905654 Msa0414950:CDS 35.0%
! AGATGGTTGATACCAATAAC+GGG + chr3_2:60905636-60905655 Msa0414950:CDS 35.0%
!!! CCTGTTTTGATTGGCTATTT+GGG + chr3_2:60906041-60906060 Msa0414950:intron 35.0%
TGTTTATCCAAATAGGCTCT+AGG + chr3_2:60906162-60906181 Msa0414950:intron 35.0%
AACTAAACCTAGAGCCTATT+TGG - chr3_2:60906172-60906191 None:intergenic 35.0%
! ATTTAGATCTAGGGCCTATT+TGG - chr3_2:60906217-60906236 None:intergenic 35.0%
!! TAGTCTTGATGTTGGCTTAT+TGG + chr3_2:60906332-60906351 Msa0414950:intron 35.0%
!! AGTCTTGATGTTGGCTTATT+GGG + chr3_2:60906333-60906352 Msa0414950:intron 35.0%
CCCGATAAAATCATACTATG+TGG - chr3_2:60906359-60906378 None:intergenic 35.0%
AGTTCAATGTAATCACGTGT+CGG + chr3_2:60906514-60906533 Msa0414950:intron 35.0%
AGAATTCAAGTGTCTTTGGT+CGG + chr3_2:60906731-60906750 Msa0414950:intron 35.0%
ATATGCCCGTACTTTAATAG+TGG + chr3_2:60906777-60906796 Msa0414950:intron 35.0%
TGCTCTCCACTATTAAAGTA+CGG - chr3_2:60906786-60906805 None:intergenic 35.0%
!! TTATTGATTCTAGGGGATTG+TGG + chr3_2:60906902-60906921 Msa0414950:intron 35.0%
!! TATTGATTCTAGGGGATTGT+GGG + chr3_2:60906903-60906922 Msa0414950:intron 35.0%
AAAACCATATCAAGGGAGAA+TGG - chr3_2:60907033-60907052 None:intergenic 35.0%
!!! GATCTCTTTTAGGATATTGG+AGG + chr3_2:60907053-60907072 Msa0414950:intron 35.0%
CACGAGCTATACAAACAAAT+TGG + chr3_2:60907131-60907150 Msa0414950:CDS 35.0%
AAGATACTTCTGCACAAACT+CGG - chr3_2:60907270-60907289 None:intergenic 35.0%
! CTTTGTATTTTGCTCCGTAA+AGG + chr3_2:60907409-60907428 Msa0414950:intron 35.0%
CTCTGGATAATGAATTCCAA+AGG + chr3_2:60907764-60907783 Msa0414950:intron 35.0%
! AAAGGTTTTACGCAAACCTT+TGG - chr3_2:60907783-60907802 None:intergenic 35.0%
TAGGTAACAAAAGGGATGTT+TGG - chr3_2:60907856-60907875 None:intergenic 35.0%
AATTGGAAAAAGGGCAATGA+TGG - chr3_2:60907937-60907956 None:intergenic 35.0%
!! AAGCTCTAGGCAATTTCAAT+TGG - chr3_2:60907954-60907973 None:intergenic 35.0%
AGCACTATGAGAAACAGAAT+TGG + chr3_2:60908127-60908146 Msa0414950:intron 35.0%
!! CAGTACTTTCTAGAGTTGAT+TGG + chr3_2:60908182-60908201 Msa0414950:intron 35.0%
ACAAAAATCTTCCACAGAGT+TGG + chr3_2:60908282-60908301 Msa0414950:intron 35.0%
CGGAAACTGAAAGAAAACTA+AGG - chr3_2:60908322-60908341 None:intergenic 35.0%
AATTCGAAGTCCAGGAAATA+GGG - chr3_2:60908436-60908455 None:intergenic 35.0%
AAATTCGAAGTCCAGGAAAT+AGG - chr3_2:60908437-60908456 None:intergenic 35.0%
GCATACATACCAATGAAATC+CGG - chr3_2:60908482-60908501 None:intergenic 35.0%
!! AAGAGTACTGGTTATACACA+TGG - chr3_2:60908515-60908534 None:intergenic 35.0%
AATACCTCTATTGTTCTCTC+AGG + chr3_2:60908849-60908868 Msa0414950:intron 35.0%
! GTAGTCAAATCGAAGAGTAT+AGG - chr3_2:60908924-60908943 None:intergenic 35.0%
! ATTTTACGATCAAGTCTTCC+AGG - chr3_2:60909089-60909108 None:intergenic 35.0%
AATAATAGGTAGCCTGTTCA+TGG + chr3_2:60909230-60909249 Msa0414950:intron 35.0%
ACTGAACTGTTATGGAAGTT+CGG - chr3_2:60909344-60909363 None:intergenic 35.0%
!! AAATCTATGTTGGTTCGGTT+CGG - chr3_2:60909388-60909407 None:intergenic 35.0%
ACTCAAACAGAAGAAAACGA+AGG + chr3_2:60909577-60909596 Msa0414950:intron 35.0%
CTCAAACAGAAGAAAACGAA+GGG + chr3_2:60909578-60909597 Msa0414950:intron 35.0%
TCCATTCATAACGGTGAAAT+TGG + chr3_2:60909649-60909668 Msa0414950:intron 35.0%
! CTGAGCCATTTATTTGAAAC+TGG - chr3_2:60909860-60909879 None:intergenic 35.0%
! GCTCAGTAAACTAACTGTTT+TGG + chr3_2:60909874-60909893 Msa0414950:intron 35.0%
!!! CTGTTTTGGTAAACGTAGTT+CGG + chr3_2:60909888-60909907 Msa0414950:intron 35.0%
!!! GAAACATTTTTAGCACGAAC+CGG - chr3_2:60909930-60909949 None:intergenic 35.0%
TTCATTTCAGTTCTCCAGTT+TGG + chr3_2:60909947-60909966 Msa0414950:intron 35.0%
!!! AGTTCTCCAGTTTGGTTTTA+TGG + chr3_2:60909955-60909974 Msa0414950:intron 35.0%
GACTATTAATAACTTACCCG+GGG + chr3_2:60910342-60910361 Msa0414950:intron 35.0%
!! TGAAAATTGGTGTTATGCTG+TGG + chr3_2:60910438-60910457 Msa0414950:intron 35.0%
! GTCAGTGCTGCTATAAAATA+AGG + chr3_2:60910563-60910582 Msa0414950:intron 35.0%
TCTCACAGCAATCTGTTAAA+TGG - chr3_2:60910655-60910674 None:intergenic 35.0%
TAACCTTTCTCAAAGTCCTT+TGG - chr3_2:60910814-60910833 None:intergenic 35.0%
! AGGACTTTGAGAAAGGTTAT+AGG + chr3_2:60910815-60910834 Msa0414950:CDS 35.0%
!! GAATTTTACAAGTGATGACG+AGG + chr3_2:60910868-60910887 Msa0414950:exon 35.0%
! GATGAAAAGTATGCAAGAGT+CGG - chr3_2:60910993-60911012 None:intergenic 35.0%
TTTGGAGATAACAGTACCAT+TGG - chr3_2:60911112-60911131 None:intergenic 35.0%
!! AATTAGGGTTTCGGTGTTGT+GGG - chr3_2:60905316-60905335 None:intergenic 40.0%
TAATCACCGTCTTCAACCAT+GGG + chr3_2:60905347-60905366 Msa0414950:exon 40.0%
GTATGTCGATGAATTCGAGT+TGG - chr3_2:60905505-60905524 None:intergenic 40.0%
ATAAACTGACCGATCACAAG+CGG - chr3_2:60905614-60905633 None:intergenic 40.0%
! GATACCAATAACGGGATTGT+TGG + chr3_2:60905644-60905663 Msa0414950:CDS 40.0%
AGATCCAACAATCCCGTTAT+TGG - chr3_2:60905651-60905670 None:intergenic 40.0%
TCTTGTTGATGTTCTTCCAC+CGG + chr3_2:60905769-60905788 Msa0414950:CDS 40.0%
TTGACTAAGAAGCGAGATAC+TGG - chr3_2:60905804-60905823 None:intergenic 40.0%
!!! GCCTGTTTTGATTGGCTATT+TGG + chr3_2:60906040-60906059 Msa0414950:intron 40.0%
CCCAAATAGCCAATCAAAAC+AGG - chr3_2:60906044-60906063 None:intergenic 40.0%
!! TAATTGCTTGCTGTGATGCA+TGG + chr3_2:60906449-60906468 Msa0414950:intron 40.0%
TTTAGTCCTTGCAATTGCTG+TGG - chr3_2:60906580-60906599 None:intergenic 40.0%
GTGTCCACTCCAATCTTTAA+TGG - chr3_2:60906615-60906634 None:intergenic 40.0%
TGGGAGAATTCAAGTGTCTT+TGG + chr3_2:60906727-60906746 Msa0414950:intron 40.0%
TCGGTAGTTGCAATATAAGC+TGG + chr3_2:60906750-60906769 Msa0414950:intron 40.0%
GCTCTCCACTATTAAAGTAC+GGG - chr3_2:60906785-60906804 None:intergenic 40.0%
GCAATACTTGTAGATGAGCT+CGG + chr3_2:60906803-60906822 Msa0414950:intron 40.0%
CAATACTTGTAGATGAGCTC+GGG + chr3_2:60906804-60906823 Msa0414950:intron 40.0%
AATACTTGTAGATGAGCTCG+GGG + chr3_2:60906805-60906824 Msa0414950:intron 40.0%
! ATTGATTCTAGGGGATTGTG+GGG + chr3_2:60906904-60906923 Msa0414950:intron 40.0%
AGGATGTGATATCCAAAAGC+AGG + chr3_2:60907073-60907092 Msa0414950:CDS 40.0%
TATAGTAAAACACCTCGAGG+TGG - chr3_2:60907164-60907183 None:intergenic 40.0%
CCATATAGTAAAACACCTCG+AGG - chr3_2:60907167-60907186 None:intergenic 40.0%
!! CCTCGAGGTGTTTTACTATA+TGG + chr3_2:60907164-60907183 Msa0414950:CDS 40.0%
GGTATGATTAGCAACAGCTT+TGG - chr3_2:60907219-60907238 None:intergenic 40.0%
!! GAGTTTGTGCAGAAGTATCT+TGG + chr3_2:60907269-60907288 Msa0414950:CDS 40.0%
! GACATTATCAAGCTAGCTTG+AGG - chr3_2:60907687-60907706 None:intergenic 40.0%
! AAGCTTTCAGTTTTCCCGTT+TGG + chr3_2:60907733-60907752 Msa0414950:intron 40.0%
TCCAGAGACATTTAGCCAAA+CGG - chr3_2:60907751-60907770 None:intergenic 40.0%
GAAGACGGTAGGTAACAAAA+GGG - chr3_2:60907864-60907883 None:intergenic 40.0%
AGAAGACGGTAGGTAACAAA+AGG - chr3_2:60907865-60907884 None:intergenic 40.0%
CCATGAAATAAGAAGACGGT+AGG - chr3_2:60907875-60907894 None:intergenic 40.0%
! CCTACCGTCTTCTTATTTCA+TGG + chr3_2:60907872-60907891 Msa0414950:intron 40.0%
AGAAACATCGCAAAAGCTCT+AGG - chr3_2:60907967-60907986 None:intergenic 40.0%
! TTGAGTGACGGAAAACTTCT+TGG + chr3_2:60908008-60908027 Msa0414950:intron 40.0%
!! GAGTTGATTGGTCTTGTTCT+TGG + chr3_2:60908194-60908213 Msa0414950:intron 40.0%
! AAATCTTCCACAGAGTTGGT+TGG + chr3_2:60908286-60908305 Msa0414950:intron 40.0%
TTTATGACCAACCAACTCTG+TGG - chr3_2:60908296-60908315 None:intergenic 40.0%
ATTCGAAGTCCAGGAAATAG+GGG - chr3_2:60908435-60908454 None:intergenic 40.0%
!!! TGAGTTTTGAAACTCTGAGG+AGG - chr3_2:60908545-60908564 None:intergenic 40.0%
AAACACATCACGAACCATTC+GGG - chr3_2:60908655-60908674 None:intergenic 40.0%
GAAACACATCACGAACCATT+CGG - chr3_2:60908656-60908675 None:intergenic 40.0%
CCTGATTCAAAAGTTCCATG+AGG - chr3_2:60908788-60908807 None:intergenic 40.0%
! CCTCATGGAACTTTTGAATC+AGG + chr3_2:60908785-60908804 Msa0414950:CDS 40.0%
AACACCTGAGAGAACAATAG+AGG - chr3_2:60908856-60908875 None:intergenic 40.0%
GTTGTGAGTTGCAGTGTATT+AGG + chr3_2:60908873-60908892 Msa0414950:intron 40.0%
TGACTTTAACATTCACGGTC+TGG - chr3_2:60909019-60909038 None:intergenic 40.0%
AACAAATCGTGCAGACACTT+TGG + chr3_2:60909046-60909065 Msa0414950:CDS 40.0%
! CCTGAAATACAAGCCTCTTT+TGG - chr3_2:60909136-60909155 None:intergenic 40.0%
CCAAAAGAGGCTTGTATTTC+AGG + chr3_2:60909133-60909152 Msa0414950:intron 40.0%
TCCATAACAGTTCAGTGAAC+TGG + chr3_2:60909348-60909367 Msa0414950:intron 40.0%
ACCAGTTCACTGAACTGTTA+TGG - chr3_2:60909352-60909371 None:intergenic 40.0%
TGAAAAGGAGAAAGAGAGAG+AGG + chr3_2:60909407-60909426 Msa0414950:intron 40.0%
CAGTTACGCTCCATTACATT+TGG - chr3_2:60909553-60909572 None:intergenic 40.0%
GGCAGAGATTCCATTCATAA+CGG + chr3_2:60909640-60909659 Msa0414950:intron 40.0%
GCCAATTTCACCGTTATGAA+TGG - chr3_2:60909653-60909672 None:intergenic 40.0%
!!! CGTTTGGCTGATTTGAGTTT+TGG + chr3_2:60909792-60909811 Msa0414950:intron 40.0%
! GGTTTGGTTATCTTACCGTT+TGG + chr3_2:60909832-60909851 Msa0414950:intron 40.0%
! CAGCAGCACTAATTTTGTCA+GGG - chr3_2:60910195-60910214 None:intergenic 40.0%
! TCAGCAGCACTAATTTTGTC+AGG - chr3_2:60910196-60910215 None:intergenic 40.0%
! TGACAAAATTAGTGCTGCTG+AGG + chr3_2:60910195-60910214 Msa0414950:CDS 40.0%
TTCACTTCCATCATCTTGTG+AGG + chr3_2:60910309-60910328 Msa0414950:intron 40.0%
!! AAATTGGTGTTATGCTGTGG+AGG + chr3_2:60910441-60910460 Msa0414950:intron 40.0%
! TCTGCTATTTGTCAAGAAGC+AGG + chr3_2:60910751-60910770 Msa0414950:CDS 40.0%
! CTACCAAAGGACTTTGAGAA+AGG + chr3_2:60910808-60910827 Msa0414950:CDS 40.0%
!! GTTTCGGTGTTGTGGGATTT+GGG - chr3_2:60905309-60905328 None:intergenic 45.0%
!! GAATTAGGGTTTCGGTGTTG+TGG - chr3_2:60905317-60905336 None:intergenic 45.0%
CTAATCACCGTCTTCAACCA+TGG + chr3_2:60905346-60905365 Msa0414950:exon 45.0%
! TTTTGGATCGAGAACCATCG+CGG - chr3_2:60905378-60905397 None:intergenic 45.0%
GTGCTCAGGAAGAAGTCAAA+CGG + chr3_2:60905576-60905595 Msa0414950:CDS 45.0%
CAATCTGTTCCGCTTGTGAT+CGG + chr3_2:60905602-60905621 Msa0414950:CDS 45.0%
GCTTGTGATCGGTCAGTTTA+TGG + chr3_2:60905613-60905632 Msa0414950:CDS 45.0%
GATCGGTCAGTTTATGGAGA+TGG + chr3_2:60905619-60905638 Msa0414950:CDS 45.0%
GGATTGTTGGATCTACGACT+GGG + chr3_2:60905657-60905676 Msa0414950:CDS 45.0%
CTGGGTCGAATTACTATGTC+AGG + chr3_2:60905675-60905694 Msa0414950:CDS 45.0%
GAGATACTGGAATCAGCTTC+CGG - chr3_2:60905791-60905810 None:intergenic 45.0%
GTTAGTTGCGGCGATAACTA+GGG + chr3_2:60905972-60905991 Msa0414950:intron 45.0%
!!! GGTTTAGGGCCTGTTTTGAT+TGG + chr3_2:60906032-60906051 Msa0414950:intron 45.0%
!! TAGGCTCTAGGTTTAGTTGC+TGG + chr3_2:60906174-60906193 Msa0414950:intron 45.0%
!! AGGCTCTAGGTTTAGTTGCT+GGG + chr3_2:60906175-60906194 Msa0414950:intron 45.0%
GCAAAGACACTGTTGATCGA+AGG - chr3_2:60906558-60906577 None:intergenic 45.0%
TCTTTGCCACAGCAATTGCA+AGG + chr3_2:60906571-60906590 Msa0414950:intron 45.0%
ATACTTGTAGATGAGCTCGG+GGG + chr3_2:60906806-60906825 Msa0414950:intron 45.0%
! CTATTGGTAGCTTGTGATCC+TGG + chr3_2:60906834-60906853 Msa0414950:intron 45.0%
CATATCAAGGGAGAATGGTC+AGG - chr3_2:60907028-60907047 None:intergenic 45.0%
CTGACCATTCTCCCTTGATA+TGG + chr3_2:60907026-60907045 Msa0414950:intron 45.0%
! CCTCACGAATTTCCTGCTTT+TGG - chr3_2:60907088-60907107 None:intergenic 45.0%
CCAAAAGCAGGAAATTCGTG+AGG + chr3_2:60907085-60907104 Msa0414950:CDS 45.0%
!! ATTGGTATTGATCCACCTCG+AGG + chr3_2:60907149-60907168 Msa0414950:CDS 45.0%
!! ATTGTTTTGCCAGTTCCAGG+GGG - chr3_2:60907191-60907210 None:intergenic 45.0%
!! CATTGTTTTGCCAGTTCCAG+GGG - chr3_2:60907192-60907211 None:intergenic 45.0%
!! GCATTGTTTTGCCAGTTCCA+GGG - chr3_2:60907193-60907212 None:intergenic 45.0%
!! AGCATTGTTTTGCCAGTTCC+AGG - chr3_2:60907194-60907213 None:intergenic 45.0%
!! ATACCACTGCTGCTTTCATC+AGG + chr3_2:60907234-60907253 Msa0414950:CDS 45.0%
!! TACCACTGCTGCTTTCATCA+GGG + chr3_2:60907235-60907254 Msa0414950:CDS 45.0%
!! TGTGCAGAAGTATCTTGGAG+AGG + chr3_2:60907274-60907293 Msa0414950:CDS 45.0%
CCAGAGACATTTAGCCAAAC+GGG - chr3_2:60907750-60907769 None:intergenic 45.0%
TGGAAAAAGGGCAATGATGG+AGG - chr3_2:60907934-60907953 None:intergenic 45.0%
CTTGTTCTTGGCCGACATAT+TGG + chr3_2:60908206-60908225 Msa0414950:intron 45.0%
ATTTATCGCCCCCTATTTCC+TGG + chr3_2:60908423-60908442 Msa0414950:intron 45.0%
TTCGAAGTCCAGGAAATAGG+GGG - chr3_2:60908434-60908453 None:intergenic 45.0%
! TTGAAACTCTGAGGAGGCTT+CGG - chr3_2:60908539-60908558 None:intergenic 45.0%
TATATTTCAGGGTCCCCGAA+TGG + chr3_2:60908638-60908657 Msa0414950:intron 45.0%
AACACATCACGAACCATTCG+GGG - chr3_2:60908654-60908673 None:intergenic 45.0%
GCTAGATTTGATGCCCAAAC+CGG + chr3_2:60908738-60908757 Msa0414950:CDS 45.0%
TTCTCTATCAGCTCCGGTTT+GGG - chr3_2:60908754-60908773 None:intergenic 45.0%
CTGTACTTCTCTATCAGCTC+CGG - chr3_2:60908760-60908779 None:intergenic 45.0%
! AGAAGTACAGCGTATCCTCA+TGG + chr3_2:60908770-60908789 Msa0414950:CDS 45.0%
TTTGGCGTCTATCAGGCAAA+GGG - chr3_2:60909118-60909137 None:intergenic 45.0%
! TTTTGGCGTCTATCAGGCAA+AGG - chr3_2:60909119-60909138 None:intergenic 45.0%
TAGGTAGCCTGTTCATGGTT+TGG + chr3_2:60909235-60909254 Msa0414950:intron 45.0%
!! AGCCTGTTCATGGTTTGGTT+CGG + chr3_2:60909240-60909259 Msa0414950:intron 45.0%
CAGAAGAAAACGAAGGGACT+AGG + chr3_2:60909584-60909603 Msa0414950:intron 45.0%
GGGACTAGGATTGTGATTCA+CGG + chr3_2:60909598-60909617 Msa0414950:intron 45.0%
TTTGAGTGATGAAGTGGACC+TGG + chr3_2:60910153-60910172 Msa0414950:CDS 45.0%
! AGCACTAATTTTGTCAGGGC+GGG - chr3_2:60910191-60910210 None:intergenic 45.0%
! CAGCACTAATTTTGTCAGGG+CGG - chr3_2:60910192-60910211 None:intergenic 45.0%
! AGTATCGGGCTTCTTCACAT+TGG - chr3_2:60910842-60910861 None:intergenic 45.0%
! GGTGTTGTGGGATTTGGGAT+TGG - chr3_2:60905304-60905323 None:intergenic 50.0%
!! GGTTTCGGTGTTGTGGGATT+TGG - chr3_2:60905310-60905329 None:intergenic 50.0%
GAGGAACCCATGGTTGAAGA+CGG - chr3_2:60905356-60905375 None:intergenic 50.0%
! AGAAAGGGAAGGTGGTGGTT+CGG - chr3_2:60905408-60905427 None:intergenic 50.0%
GAGAAAGAAAGGGAAGGTGG+TGG - chr3_2:60905413-60905432 None:intergenic 50.0%
GAGGAGAAAGAAAGGGAAGG+TGG - chr3_2:60905416-60905435 None:intergenic 50.0%
! GGGATTTGAGGAGAGTGTAG+AGG - chr3_2:60905475-60905494 None:intergenic 50.0%
!! GAATTCGAGTTGGCGTTGGA+GGG - chr3_2:60905495-60905514 None:intergenic 50.0%
!! TGAATTCGAGTTGGCGTTGG+AGG - chr3_2:60905496-60905515 None:intergenic 50.0%
!! CGATGAATTCGAGTTGGCGT+TGG - chr3_2:60905499-60905518 None:intergenic 50.0%
CGATCACAAGCGGAACAGAT+TGG - chr3_2:60905604-60905623 None:intergenic 50.0%
GGGATTGTTGGATCTACGAC+TGG + chr3_2:60905656-60905675 Msa0414950:CDS 50.0%
ATACTGGAATCAGCTTCCGG+TGG - chr3_2:60905788-60905807 None:intergenic 50.0%
! GGTTAGTTGCGGCGATAACT+AGG + chr3_2:60905971-60905990 Msa0414950:intron 50.0%
TAACCTCAGGCATGAGAACC+AGG - chr3_2:60906855-60906874 None:intergenic 50.0%
TATAGCTCGTGATGCGTGAG+AGG - chr3_2:60907122-60907141 None:intergenic 50.0%
! GTTTTACTATATGGCCCCCC+TGG + chr3_2:60907173-60907192 Msa0414950:CDS 50.0%
!! TTGTTTTGCCAGTTCCAGGG+GGG - chr3_2:60907190-60907209 None:intergenic 50.0%
AACCCTGATGAAAGCAGCAG+TGG - chr3_2:60907240-60907259 None:intergenic 50.0%
!! TGCTGCTTTCATCAGGGTTG+TGG + chr3_2:60907241-60907260 Msa0414950:CDS 50.0%
! GCTGCTTTCATCAGGGTTGT+GGG + chr3_2:60907242-60907261 Msa0414950:CDS 50.0%
CCCGTTTGGCTAAATGTCTC+TGG + chr3_2:60907747-60907766 Msa0414950:intron 50.0%
! TGAAACTCTGAGGAGGCTTC+GGG - chr3_2:60908538-60908557 None:intergenic 50.0%
CTTCTCTATCAGCTCCGGTT+TGG - chr3_2:60908755-60908774 None:intergenic 50.0%
AAGTCTTCCAGGACGCAAGA+GGG - chr3_2:60909078-60909097 None:intergenic 50.0%
TGCCTGATAGACGCCAAAAG+AGG + chr3_2:60909120-60909139 Msa0414950:CDS 50.0%
! AGCCTCTTTTGGCGTCTATC+AGG - chr3_2:60909125-60909144 None:intergenic 50.0%
CTCCGAACCAAACCATGAAC+AGG - chr3_2:60909245-60909264 None:intergenic 50.0%
AGGATTGTGATTCACGGCGT+TGG + chr3_2:60909604-60909623 Msa0414950:intron 50.0%
GGATTGTGATTCACGGCGTT+GGG + chr3_2:60909605-60909624 Msa0414950:intron 50.0%
!! GGCGTTGGGAATGGTTTTCA+CGG + chr3_2:60909619-60909638 Msa0414950:intron 50.0%
! ACTGCATTTGAGACAGCGAG+TGG + chr3_2:60909679-60909698 Msa0414950:intron 50.0%
GGCGGGAAACATAATCTTCC+AGG - chr3_2:60910174-60910193 None:intergenic 50.0%
TAACTTACCCGGGGAGTAGT+TGG + chr3_2:60910351-60910370 Msa0414950:intron 50.0%
AGAAGCTACCAACTACTCCC+CGG - chr3_2:60910362-60910381 None:intergenic 50.0%
GGGGAGGAGAAAGAAAGGGA+AGG - chr3_2:60905419-60905438 None:intergenic 55.0%
GGTGGGGGAGGAGAAAGAAA+GGG - chr3_2:60905423-60905442 None:intergenic 55.0%
! GAGGAGAGTGTAGAGGTCGT+CGG - chr3_2:60905468-60905487 None:intergenic 55.0%
! GTTGGCGTTGGAGGGATTTG+AGG - chr3_2:60905487-60905506 None:intergenic 55.0%
!!! TCGGGAGCTTTTGAAGCCGT+CGG + chr3_2:60905715-60905734 Msa0414950:CDS 55.0%
!!! GCTTTTGAAGCCGTCGGCTT+CGG + chr3_2:60905721-60905740 Msa0414950:CDS 55.0%
!! TCACGTGTCGGTGTCAGACA+CGG + chr3_2:60906526-60906545 Msa0414950:intron 55.0%
GAGCTCGGGGGAGTTTCTAT+TGG + chr3_2:60906818-60906837 Msa0414950:intron 55.0%
! GATCCTGGTTCTCATGCCTG+AGG + chr3_2:60906849-60906868 Msa0414950:intron 55.0%
GCAGGAAATTCGTGAGGCTG+TGG + chr3_2:60907091-60907110 Msa0414950:CDS 55.0%
CAAGTCTTCCAGGACGCAAG+AGG - chr3_2:60909079-60909098 None:intergenic 55.0%
! GTGATTCACGGCGTTGGGAA+TGG + chr3_2:60909610-60909629 Msa0414950:intron 55.0%
GAAGCTACCAACTACTCCCC+GGG - chr3_2:60910361-60910380 None:intergenic 55.0%
AACCATGGGTTCCTCCGCGA+TGG + chr3_2:60905361-60905380 Msa0414950:exon 60.0%
AACCATCGCGGAGGAACCCA+TGG - chr3_2:60905366-60905385 None:intergenic 60.0%
TGGATCGAGAACCATCGCGG+AGG - chr3_2:60905375-60905394 None:intergenic 60.0%
!!! GGTGGTTCGGTGAGGGGTTT+TGG - chr3_2:60905395-60905414 None:intergenic 60.0%
!! GAAGGTGGTGGTTCGGTGAG+GGG - chr3_2:60905401-60905420 None:intergenic 60.0%
!! GGAAGGTGGTGGTTCGGTGA+GGG - chr3_2:60905402-60905421 None:intergenic 60.0%
CGGTGGGGGAGGAGAAAGAA+AGG - chr3_2:60905424-60905443 None:intergenic 60.0%
!! AGGAGGAATCGGTGTCGGTG+GGG - chr3_2:60905439-60905458 None:intergenic 60.0%
!! GAGGAGGAATCGGTGTCGGT+GGG - chr3_2:60905440-60905459 None:intergenic 60.0%
GGTGGAGGAGGAATCGGTGT+CGG - chr3_2:60905444-60905463 None:intergenic 60.0%
GTCGGAGGTGGAGGAGGAAT+CGG - chr3_2:60905450-60905469 None:intergenic 60.0%
AGTGTAGAGGTCGTCGGAGG+TGG - chr3_2:60905462-60905481 None:intergenic 60.0%
! GAGAGTGTAGAGGTCGTCGG+AGG - chr3_2:60905465-60905484 None:intergenic 60.0%
ACGCGAGCTTCTTCGTGCTC+AGG + chr3_2:60905562-60905581 Msa0414950:CDS 60.0%
TGAAGCGCAACCGAAGCCGA+CGG - chr3_2:60905734-60905753 None:intergenic 60.0%
!! CACGTGTCGGTGTCAGACAC+GGG + chr3_2:60906527-60906546 Msa0414950:intron 60.0%
CTATATGGCCCCCCTGGAAC+TGG + chr3_2:60907179-60907198 Msa0414950:CDS 60.0%
! GGAGGCTTCGGGAAGAGTAC+TGG - chr3_2:60908527-60908546 None:intergenic 60.0%
!! GGGAAGGTGGTGGTTCGGTG+AGG - chr3_2:60905403-60905422 None:intergenic 65.0%
!! GGAGGAATCGGTGTCGGTGG+GGG - chr3_2:60905438-60905457 None:intergenic 65.0%
!! GGAGGAGGAATCGGTGTCGG+TGG - chr3_2:60905441-60905460 None:intergenic 65.0%
GTAGAGGTCGTCGGAGGTGG+AGG - chr3_2:60905459-60905478 None:intergenic 65.0%
GATCCTGCCCTCTTGCGTCC+TGG + chr3_2:60909068-60909087 Msa0414950:CDS 65.0%
CTTCCAGGACGCAAGAGGGC+AGG - chr3_2:60909074-60909093 None:intergenic 65.0%
!! GGAATCGGTGTCGGTGGGGG+AGG - chr3_2:60905435-60905454 None:intergenic 70.0%
GAGGTCGTCGGAGGTGGAGG+AGG - chr3_2:60905456-60905475 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 60905258 60911204 60905258 ID=Msa0414950;Name=Msa0414950
chr3_2 mRNA 60905258 60911204 60905258 ID=Msa0414950-mRNA-1;Parent=Msa0414950;Name=Msa0414950-mRNA-1;_AED=0.30;_eAED=0.30;_QI=107|0.8|0.83|1|1|1|6|322|412
chr3_2 exon 60905258 60905850 60905258 ID=Msa0414950-mRNA-1:exon:12800;Parent=Msa0414950-mRNA-1
chr3_2 exon 60907065 60907295 60907065 ID=Msa0414950-mRNA-1:exon:12801;Parent=Msa0414950-mRNA-1
chr3_2 exon 60908648 60908806 60908648 ID=Msa0414950-mRNA-1:exon:12802;Parent=Msa0414950-mRNA-1
chr3_2 exon 60909002 60909145 60909002 ID=Msa0414950-mRNA-1:exon:12803;Parent=Msa0414950-mRNA-1
chr3_2 exon 60910133 60910216 60910133 ID=Msa0414950-mRNA-1:exon:12804;Parent=Msa0414950-mRNA-1
chr3_2 exon 60910748 60911204 60910748 ID=Msa0414950-mRNA-1:exon:12805;Parent=Msa0414950-mRNA-1
chr3_2 five_prime_UTR 60905258 60905364 60905258 ID=Msa0414950-mRNA-1:five_prime_utr;Parent=Msa0414950-mRNA-1
chr3_2 CDS 60905365 60905850 60905365 ID=Msa0414950-mRNA-1:cds;Parent=Msa0414950-mRNA-1
chr3_2 CDS 60907065 60907295 60907065 ID=Msa0414950-mRNA-1:cds;Parent=Msa0414950-mRNA-1
chr3_2 CDS 60908648 60908806 60908648 ID=Msa0414950-mRNA-1:cds;Parent=Msa0414950-mRNA-1
chr3_2 CDS 60909002 60909145 60909002 ID=Msa0414950-mRNA-1:cds;Parent=Msa0414950-mRNA-1
chr3_2 CDS 60910133 60910216 60910133 ID=Msa0414950-mRNA-1:cds;Parent=Msa0414950-mRNA-1
chr3_2 CDS 60910748 60910882 60910748 ID=Msa0414950-mRNA-1:cds;Parent=Msa0414950-mRNA-1
chr3_2 three_prime_UTR 60910883 60911204 60910883 ID=Msa0414950-mRNA-1:three_prime_utr;Parent=Msa0414950-mRNA-1
Gene Sequence

>Msa0414950

ATGGGTTCCTCCGCGATGGTTCTCGATCCAAAACCCCTCACCGAACCACCACCTTCCCTTTCTTTCTCCTCCCCCACCGACACCGATTCCTCCTCCACCTCCGACGACCTCTACACTCTCCTCAAATCCCTCCAACGCCAACTCGAATTCATCGACATACAAGAAGAGTATGTCAAAGACGAACAAAAGAATCTCAAACGCGAGCTTCTTCGTGCTCAGGAAGAAGTCAAACGGATCCAATCTGTTCCGCTTGTGATCGGTCAGTTTATGGAGATGGTTGATACCAATAACGGGATTGTTGGATCTACGACTGGGTCGAATTACTATGTCAGGATTTTGAGTACGATTAATCGGGAGCTTTTGAAGCCGTCGGCTTCGGTTGCGCTTCATCGTCATTCGAATGCTCTTGTTGATGTTCTTCCACCGGAAGCTGATTCCAGTATCTCGCTTCTTAGTCAATCTGAGAAGCCTGATGTTACTTATAATGATATTGGAGGATGTGATATCCAAAAGCAGGAAATTCGTGAGGCTGTGGAGTTACCTCTCACGCATCACGAGCTATACAAACAAATTGGTATTGATCCACCTCGAGGTGTTTTACTATATGGCCCCCCTGGAACTGGCAAAACAATGCTTGCCAAAGCTGTTGCTAATCATACCACTGCTGCTTTCATCAGGGTTGTGGGATCCGAGTTTGTGCAGAAGTATCTTGGAGAGGGTCCCCGAATGGTTCGTGATGTGTTTCGTCTTGCAAAAGAAAACGCCCCTGCAATTATATTTATCGATGAGGTAGATGCGATAGCTACTGCTAGATTTGATGCCCAAACCGGAGCTGATAGAGAAGTACAGCGTATCCTCATGGAACTTTTGAATCAGATGGACGGTTTTGACCAGACCGTGAATGTTAAAGTCATAATGGCAACAAATCGTGCAGACACTTTGGATCCTGCCCTCTTGCGTCCTGGAAGACTTGATCGTAAAATTGAGTTCCCTTTGCCTGATAGACGCCAAAAGAGGCTTGTTTGCACAGCCAAAATGAATTTGAGTGATGAAGTGGACCTGGAAGATTATGTTTCCCGCCCTGACAAAATTAGTGCTGCTGAGATATCTGCTATTTGTCAAGAAGCAGGAATGCATGCTGTTCGTAAGAATAGATATGTCATACTACCAAAGGACTTTGAGAAAGGTTATAGGACCAATGTGAAGAAGCCCGATACTGACTTTGAATTTTACAAGTGA
Protein sequence

>Msa0414950

MGSSAMVLDPKPLTEPPPSLSFSSPTDTDSSSTSDDLYTLLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDTNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVCTAKMNLSDEVDLEDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK*