AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0657670


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0657670 MtrunA17_Chr8g0380691 96.682 422 14 0 1 422 1 422 0.0 845
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0657670 AT1G60990.3 67.892 408 120 2 24 422 27 432 0.0 574
Msa0657670 AT1G60990.2 67.892 408 120 2 24 422 27 432 0.0 574
Msa0657670 AT1G60990.1 67.892 408 120 2 24 422 27 432 0.0 574
Msa0657670 AT1G11860.2 25.444 338 231 11 93 413 70 403 3.58e-12 68.2
Msa0657670 AT1G11860.1 25.444 338 231 11 93 413 70 403 3.58e-12 68.2
Msa0657670 AT1G11860.3 25.444 338 231 11 93 413 85 418 3.67e-12 68.2

Find 117 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATCTTACTTGGCTACTTT+TGG 0.165355 4_3:+67492518 None:intergenic
ACTGCAGGTGCCGAGGTTTC+TGG 0.175027 4_3:-67493987 Msa0657670:CDS
TTTCCAACTCCTATAGTTAT+AGG 0.205103 4_3:+67491852 None:intergenic
TGTCATTTCGATTAGGTTAT+TGG 0.218981 4_3:+67495224 None:intergenic
ACCCATCGACCACGACTTCT+TGG 0.283454 4_3:-67495019 Msa0657670:intron
TGTTGACATCATCATTATTA+TGG 0.291745 4_3:-67489286 Msa0657670:three_prime_UTR
TACTTACTTGTTCAGCATTT+CGG 0.314008 4_3:+67492748 None:intergenic
GCAAACGAGCTTATTTGTTT+TGG 0.315922 4_3:-67492547 Msa0657670:CDS
CCATCGGAACACTTCGGATT+AGG 0.320328 4_3:-67489451 Msa0657670:CDS
ACGTCCTGGAGGCCTGTCTA+TGG 0.323499 4_3:-67490144 Msa0657670:CDS
CACTGGATGCCGCAGACAAT+GGG 0.348039 4_3:-67493926 Msa0657670:CDS
TTGAACGTAGGTGATCTTAT+TGG 0.350341 4_3:-67492418 Msa0657670:CDS
CTGCAGGTGCCGAGGTTTCT+GGG 0.353745 4_3:-67493986 Msa0657670:CDS
ATGGAGTCAAACAGAGGTTA+TGG 0.353861 4_3:-67489970 Msa0657670:CDS
TGCTCAAGGGGCTGTTGCAA+TGG 0.369762 4_3:-67491757 Msa0657670:CDS
CTTGTTCAGCATTTCGGTAA+TGG 0.379644 4_3:+67492754 None:intergenic
GCTCAAGGGGCTGTTGCAAT+GGG 0.395855 4_3:-67491756 Msa0657670:CDS
TGGTTTCAGCAGAGACTTGT+AGG 0.401443 4_3:-67492778 Msa0657670:CDS
ACATCAAATTTAGAACAATA+AGG 0.403007 4_3:+67495265 None:intergenic
TCGTTTGTGAGCTCCATTCC+AGG 0.405499 4_3:+67490172 None:intergenic
CGGCAGCTGCTCCATCTGTC+TGG 0.407182 4_3:-67491791 Msa0657670:CDS
CCAGAGTACTGCAAACTTTG+AGG 0.413393 4_3:-67493146 Msa0657670:CDS
ACAGTGTTGTCATTTCGATT+AGG 0.418788 4_3:+67495217 None:intergenic
AACTTTGAGGGTCTACAGGC+AGG 0.423954 4_3:-67493133 Msa0657670:CDS
ATTGTTGGAGACAACATCAT+TGG 0.427946 4_3:-67489388 Msa0657670:CDS
TCACACTTCGGCCGGATAAG+AGG 0.440438 4_3:-67493405 Msa0657670:intron
GATAAGCAGCCTATAACTAT+AGG 0.445173 4_3:-67491861 Msa0657670:CDS
GGTGCCGAGGTTTCTGGGGA+AGG 0.446680 4_3:-67493981 Msa0657670:CDS
CTCAGGTTGTTACAAAGGAC+AGG 0.451833 4_3:-67490020 Msa0657670:intron
TCTCAACAGCGTCTGCCATC+TGG 0.453158 4_3:-67489340 Msa0657670:CDS
TGCAAACTTTGAGGGTCTAC+AGG 0.456706 4_3:-67493137 Msa0657670:CDS
TTCTCAGGAAGGCCTGCTCC+TGG 0.456760 4_3:-67490190 Msa0657670:intron
TGGAGTCAAACAGAGGTTAT+GGG 0.459832 4_3:-67489969 Msa0657670:CDS
GTGAGCTCCATTCCAGGAGC+AGG 0.460015 4_3:+67490178 None:intergenic
CTGAGGTTTGGGAGTAAACA+AGG 0.460947 4_3:+67495132 None:intergenic
CAGAGTACTGCAAACTTTGA+GGG 0.462222 4_3:-67493145 Msa0657670:CDS
GCACTGGATGCCGCAGACAA+TGG 0.467510 4_3:-67493927 Msa0657670:CDS
GAAGGAGACAGTGTAATTGT+TGG 0.468448 4_3:-67489403 Msa0657670:CDS
AAGTCGTGGTCGATGGGTGG+AGG 0.470425 4_3:+67495024 None:intergenic
TGTGAGCAGAATCTGAGGTT+TGG 0.470983 4_3:+67495120 None:intergenic
AAATGAAAGTACCTCTTATC+CGG 0.476064 4_3:+67493394 None:intergenic
GGTCGATGGGTGGAGGGGAA+AGG 0.476226 4_3:+67495031 None:intergenic
GTGAGCAGAATCTGAGGTTT+GGG 0.480461 4_3:+67495121 None:intergenic
TTGCAATGGGTTCTAATGCT+TGG 0.480918 4_3:-67491743 Msa0657670:CDS
TACATGGCACATAAGTTTAA+CGG 0.481205 4_3:+67489148 None:intergenic
CTTTCTGCAGCCGCAGAACC+TGG 0.482443 4_3:-67489938 Msa0657670:CDS
GATCTTATTGGAAAACCATA+TGG 0.483670 4_3:-67492406 Msa0657670:CDS
TCTTGTTCTTCTTGTTGCGT+TGG 0.487003 4_3:+67495097 None:intergenic
AGAAATTGAGTTCCATAGAC+AGG 0.487933 4_3:+67490132 None:intergenic
GGTTTGAGGAATAGTGAAGA+TGG 0.488115 4_3:+67495153 None:intergenic
CCTCAAAGTTTGCAGTACTC+TGG 0.489181 4_3:+67493146 None:intergenic
CTTCGAAGGTTGAAGTAAGA+TGG 0.490320 4_3:+67495189 None:intergenic
GCCAGGCTCATAACATATGA+TGG 0.495682 4_3:-67489989 Msa0657670:CDS
AGGAAGGCCTGCTCCTGGAA+TGG 0.496441 4_3:-67490185 Msa0657670:CDS
ATTATTATGGTCAAGTATGA+TGG 0.501347 4_3:-67489273 Msa0657670:three_prime_UTR
CAGCCTATAACTATAGGAGT+TGG 0.503689 4_3:-67491855 Msa0657670:CDS
GGAAATATCATTTCTGAAGG+TGG 0.508021 4_3:-67491834 Msa0657670:CDS
GTGCCGAGGTTTCTGGGGAA+GGG 0.511609 4_3:-67493980 Msa0657670:CDS
TACCAAGAAGTCGTGGTCGA+TGG 0.513887 4_3:+67495017 None:intergenic
AAATGTTGATGAGTGCCATA+TGG 0.514065 4_3:+67492391 None:intergenic
AGTTCCATAGACAGGCCTCC+AGG 0.514728 4_3:+67490140 None:intergenic
TCCATCATATGTTATGAGCC+TGG 0.520694 4_3:+67489988 None:intergenic
TATTGCACATGCGTGGATCA+TGG 0.521802 4_3:-67492929 Msa0657670:intron
AGTCGTGGTCGATGGGTGGA+GGG 0.521890 4_3:+67495025 None:intergenic
CACAAACGAATTCAACGTCC+TGG 0.523539 4_3:-67490158 Msa0657670:CDS
TGGATCTTTCACACTTCGGC+CGG 0.524782 4_3:-67493413 Msa0657670:CDS
ACCAAGAAGTCGTGGTCGAT+GGG 0.525840 4_3:+67495018 None:intergenic
TTGGGAGTAAACAAGGTTTG+AGG 0.530532 4_3:+67495139 None:intergenic
GAGACCATGGTTGGCTTCGA+AGG 0.530681 4_3:+67495175 None:intergenic
GGTAGTATTATCACTGTGGA+TGG 0.539084 4_3:-67489917 Msa0657670:CDS
CAGACAGATGGAGCAGCTGC+CGG 0.543197 4_3:+67491792 None:intergenic
AGAATAGCTTTCCAGACAGA+TGG 0.545861 4_3:+67491780 None:intergenic
GTCGTGGTCGATGGGTGGAG+GGG 0.550885 4_3:+67495026 None:intergenic
ATATCTATAGTTCGAGCTGT+TGG 0.554752 4_3:+67492949 None:intergenic
CAGGACACTGTCAAAACTGC+AGG 0.559001 4_3:-67494002 Msa0657670:CDS
TGGAAAGCTATTCTTGCTCA+AGG 0.559551 4_3:-67491771 Msa0657670:CDS
TCGGATTAGGTTACATCAAG+AGG 0.561096 4_3:-67489438 Msa0657670:CDS
TCATAACGATGAAGAAGCAC+TGG 0.561241 4_3:-67493943 Msa0657670:CDS
GTTGGAAATATCATTTCTGA+AGG 0.563837 4_3:-67491837 Msa0657670:CDS
GAACTCAATTTCTCTAAACA+AGG 0.564868 4_3:-67490122 Msa0657670:CDS
GAAAGCTATTCTTGCTCAAG+GGG 0.565925 4_3:-67491769 Msa0657670:CDS
GTTGTGGATCTTTCACACTT+CGG 0.568328 4_3:-67493417 Msa0657670:CDS
AAATTGACTAGTTACACCTC+TGG 0.573087 4_3:-67489481 Msa0657670:CDS
TTCCGATGGCTTCCTTCCAG+AGG 0.575249 4_3:+67489465 None:intergenic
AAGAGGCAAGCTGCTTCAGA+AGG 0.575817 4_3:-67489421 Msa0657670:CDS
GGAAAGCTATTCTTGCTCAA+GGG 0.577897 4_3:-67491770 Msa0657670:CDS
AGACGCTGTTGAGAAAGAAA+AGG 0.578518 4_3:+67489349 None:intergenic
TTGCAGTACTCTGGTTGTGA+AGG 0.585064 4_3:+67493155 None:intergenic
TGCAGGTGCCGAGGTTTCTG+GGG 0.597176 4_3:-67493985 Msa0657670:CDS
GTGATGGAAAGCTTGAACGT+AGG 0.598517 4_3:-67492430 Msa0657670:CDS
TATTGGCTTATTGCTAACAG+TGG 0.600228 4_3:+67495241 None:intergenic
GGAGTCAAACAGAGGTTATG+GGG 0.600336 4_3:-67489968 Msa0657670:CDS
GATAATACTACCAGGTTCTG+CGG 0.603697 4_3:+67489928 None:intergenic
GATCCCTTCCCCAGAAACCT+CGG 0.605258 4_3:+67493977 None:intergenic
CCTAATCCGAAGTGTTCCGA+TGG 0.607681 4_3:+67489451 None:intergenic
AATAAGTTGCGAGTTATCCA+AGG 0.609619 4_3:-67491720 Msa0657670:intron
AAGAAGTCGTGGTCGATGGG+TGG 0.610174 4_3:+67495021 None:intergenic
ACTTTGAGGGTCTACAGGCA+GGG 0.610437 4_3:-67493132 Msa0657670:CDS
TGACTAGTTACACCTCTGGA+AGG 0.612902 4_3:-67489477 Msa0657670:CDS
AGGAAGCCATCGGAACACTT+CGG 0.620483 4_3:-67489457 Msa0657670:CDS
CTATAGATATTGCACATGCG+TGG 0.626627 4_3:-67492936 Msa0657670:CDS
TGTCAAAACTGCAGGTGCCG+AGG 0.627788 4_3:-67493994 Msa0657670:CDS
TACAACAACCCCATTGTCTG+CGG 0.628493 4_3:+67493917 None:intergenic
AAGAACAACATGATACTACA+TGG 0.631653 4_3:+67489132 None:intergenic
AATAGTGAAGATGGAGACCA+TGG 0.638511 4_3:+67495162 None:intergenic
GTGAAGATGGAGACCATGGT+TGG 0.640860 4_3:+67495166 None:intergenic
AAGGACAGGAGACTATAGCC+AGG 0.644196 4_3:-67490006 Msa0657670:CDS
TCAACCTTCGAAGCCAACCA+TGG 0.648406 4_3:-67495179 Msa0657670:CDS
AACTCAATTTCTCTAAACAA+GGG 0.653020 4_3:-67490121 Msa0657670:intron
CACCTCTGGAAGGAAGCCAT+CGG 0.660284 4_3:-67489467 Msa0657670:CDS
GTTGGTGTGAGCAGAATCTG+AGG 0.669720 4_3:+67495115 None:intergenic
TCCACAGTGATAATACTACC+AGG 0.673931 4_3:+67489920 None:intergenic
TGGAAATTACCAAGAAGTCG+TGG 0.686676 4_3:+67495010 None:intergenic
ACCTGGTAGTATTATCACTG+TGG 0.707528 4_3:-67489921 Msa0657670:CDS
CATATGATGGAGTCAAACAG+AGG 0.709677 4_3:-67489976 Msa0657670:CDS
ACTGGATGCCGCAGACAATG+GGG 0.712791 4_3:-67493925 Msa0657670:CDS
AAACGAATTCAACGTCCTGG+AGG 0.732724 4_3:-67490155 Msa0657670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTTCATATTATAATAC+AGG - chr4_3:67491350-67491369 Msa0657670:intron 10.0%
!!! TTTTTTGTTAAAAATAAGAA+AGG + chr4_3:67492158-67492177 None:intergenic 10.0%
!!! ATTCTCAAATATATATATTT+TGG - chr4_3:67492484-67492503 Msa0657670:intron 10.0%
!!! CTTATTTTATATGAATTTTC+AGG + chr4_3:67489465-67489484 None:intergenic 15.0%
!! TCCTTAAATTGATTAATTTA+TGG - chr4_3:67490623-67490642 Msa0657670:intron 15.0%
!! ACCATAAATTAATCAATTTA+AGG + chr4_3:67490627-67490646 None:intergenic 15.0%
!!! TAATTTTAACACGAATATTT+TGG - chr4_3:67491161-67491180 Msa0657670:intron 15.0%
!!! TAAAAATGATTTTTGAAAGA+GGG + chr4_3:67491492-67491511 None:intergenic 15.0%
!!! TTGTTCTTTTATCTTATTTT+CGG + chr4_3:67491700-67491719 None:intergenic 15.0%
!! CATTAACTAAATGATTTATA+TGG - chr4_3:67491753-67491772 Msa0657670:CDS 15.0%
!! TTTAATATAATTACATGAAC+AGG - chr4_3:67491928-67491947 Msa0657670:intron 15.0%
!!! ATATTTAAGTTATGTAAAAG+AGG + chr4_3:67492336-67492355 None:intergenic 15.0%
!!! ATATATATTTTGGAATTTGT+AGG - chr4_3:67492494-67492513 Msa0657670:intron 15.0%
!! TAAATAATAACAACGTAAAA+CGG + chr4_3:67493745-67493764 None:intergenic 15.0%
!!! GATTCTAAATTTTTCTATTA+AGG - chr4_3:67494647-67494666 Msa0657670:intron 15.0%
!!! ATATAGATAGAATTTAGAAT+TGG + chr4_3:67494716-67494735 None:intergenic 15.0%
!!! ACATCAAATTTAGAACAATA+AGG + chr4_3:67489118-67489137 None:intergenic 20.0%
!! TAAAATAAGTAGATTGTACT+TGG - chr4_3:67489476-67489495 Msa0657670:CDS 20.0%
!! TAATGTTGAATTCATTTGTT+TGG - chr4_3:67489526-67489545 Msa0657670:intron 20.0%
!! ATGAAAGAAAATGATATATC+CGG + chr4_3:67489739-67489758 None:intergenic 20.0%
!!! TATATCATTTTCTTTCATCA+AGG - chr4_3:67489741-67489760 Msa0657670:intron 20.0%
!!! ATGATAGTCATTTTCAATTT+AGG - chr4_3:67490012-67490031 Msa0657670:CDS 20.0%
!!! TGATAGTCATTTTCAATTTA+GGG - chr4_3:67490013-67490032 Msa0657670:CDS 20.0%
!! AATAGACAATTGTGTAAAAT+TGG + chr4_3:67490202-67490221 None:intergenic 20.0%
!! TATTGTAATAAGAGGAAATA+GGG + chr4_3:67490232-67490251 None:intergenic 20.0%
!! ATATTGTAATAAGAGGAAAT+AGG + chr4_3:67490233-67490252 None:intergenic 20.0%
!! AGAAGTAATATTGTAATAAG+AGG + chr4_3:67490240-67490259 None:intergenic 20.0%
!!! TCATTTGGGTATTTTAAAAA+AGG + chr4_3:67490284-67490303 None:intergenic 20.0%
!! GGTAATAATTAAACAAACAA+AGG + chr4_3:67490348-67490367 None:intergenic 20.0%
!!! TAAATTTAAAAGTTTTGGGA+GGG + chr4_3:67491060-67491079 None:intergenic 20.0%
!!! TTAAATTTAAAAGTTTTGGG+AGG + chr4_3:67491061-67491080 None:intergenic 20.0%
!! ATAATACAGGATTAAGTAAT+AGG - chr4_3:67491363-67491382 Msa0657670:intron 20.0%
!!! GTAAAAATGATTTTTGAAAG+AGG + chr4_3:67491493-67491512 None:intergenic 20.0%
!!! AACTTGTATATTTTACTGTT+AGG - chr4_3:67491654-67491673 Msa0657670:intron 20.0%
!!! TGTTTTTGATAATATTCATC+AGG + chr4_3:67491735-67491754 None:intergenic 20.0%
!! ATTTATATGGAATGATTTCA+AGG - chr4_3:67491766-67491785 Msa0657670:CDS 20.0%
!! TTTACAAAAAATAACCAGTA+AGG + chr4_3:67492029-67492048 None:intergenic 20.0%
!!! TTTGTAATTACTAGTTTTCT+TGG - chr4_3:67492050-67492069 Msa0657670:intron 20.0%
!!! TTGTAATTACTAGTTTTCTT+GGG - chr4_3:67492051-67492070 Msa0657670:intron 20.0%
!! GTTAAAAATAAGAAAGGTTA+AGG + chr4_3:67492152-67492171 None:intergenic 20.0%
!! AGAATATTAACAGATAATGT+AGG + chr4_3:67492456-67492475 None:intergenic 20.0%
!!! ATTTCCTTTCATTTTTCTTA+AGG - chr4_3:67492733-67492752 Msa0657670:intron 20.0%
!! TTGAATACATCTTAAAGTTA+TGG + chr4_3:67492885-67492904 None:intergenic 20.0%
!!! ACTTTAAGATGTATTCAAAA+TGG - chr4_3:67492887-67492906 Msa0657670:intron 20.0%
!! AAAAAAATACAGGAAAATAG+AGG - chr4_3:67493181-67493200 Msa0657670:CDS 20.0%
!!! TTTACGTTGTTATTATTTAC+CGG - chr4_3:67493746-67493765 Msa0657670:intron 20.0%
!! ACTCATAAATGTATAGATAT+AGG + chr4_3:67493854-67493873 None:intergenic 20.0%
!!! GCATATAATATTTGTTTTTG+AGG - chr4_3:67494037-67494056 Msa0657670:intron 20.0%
!!! TAGTTCAAAATCTTGATTTT+TGG - chr4_3:67495063-67495082 Msa0657670:CDS 20.0%
!!! AGTTCAAAATCTTGATTTTT+GGG - chr4_3:67495064-67495083 Msa0657670:CDS 20.0%
!! AATTGATAATTGAGAAACGT+TGG + chr4_3:67489393-67489412 None:intergenic 25.0%
!! TCAAACTACAAACTTTGAAA+AGG + chr4_3:67489669-67489688 None:intergenic 25.0%
!!! GATAGTCATTTTCAATTTAG+GGG - chr4_3:67490014-67490033 Msa0657670:CDS 25.0%
!!! ATAGTCATTTTCAATTTAGG+GGG - chr4_3:67490015-67490034 Msa0657670:CDS 25.0%
!! CTTTTCTTGAAGAAATGAAA+AGG + chr4_3:67490110-67490129 None:intergenic 25.0%
! TCTTGAGAGCAAAAAAATTA+AGG - chr4_3:67490308-67490327 Msa0657670:intron 25.0%
! ATTACCACTTTCTTAGATAA+TGG - chr4_3:67490892-67490911 Msa0657670:intron 25.0%
! ACAGAAAAATGCAATAATGT+TGG - chr4_3:67491579-67491598 Msa0657670:intron 25.0%
!!! GTACATATTTTTTGCTGATA+AGG - chr4_3:67491788-67491807 Msa0657670:CDS 25.0%
!!! ATATTACTGACTTTTGCTTT+TGG - chr4_3:67492271-67492290 Msa0657670:intron 25.0%
!! AACATTTTCCTATTATCCTA+TGG - chr4_3:67492307-67492326 Msa0657670:intron 25.0%
! AAAGGAAAGATGAAAATACT+TGG + chr4_3:67492415-67492434 None:intergenic 25.0%
!! AGTATTTTCATCTTTCCTTT+TGG - chr4_3:67492415-67492434 Msa0657670:CDS 25.0%
!! TCTTTAAGCTTTTTACCAAA+AGG + chr4_3:67492433-67492452 None:intergenic 25.0%
! ACATCCTTAAGAAAAATGAA+AGG + chr4_3:67492740-67492759 None:intergenic 25.0%
! GGATGTATATTTGTTTCAAA+TGG - chr4_3:67492754-67492773 Msa0657670:intron 25.0%
! GTTATCTATTTGATAGAAAC+TGG - chr4_3:67492790-67492809 Msa0657670:CDS 25.0%
! TGTAATGGTATATAAAGAGA+GGG + chr4_3:67493004-67493023 None:intergenic 25.0%
! TTGTAATGGTATATAAAGAG+AGG + chr4_3:67493005-67493024 None:intergenic 25.0%
!!! AATTTTGTTATGGCTTGTAA+TGG + chr4_3:67493019-67493038 None:intergenic 25.0%
! AGAGTTGAGAAAAAAAATAC+AGG - chr4_3:67493171-67493190 Msa0657670:CDS 25.0%
! CTATCTAATAACGAGTAATT+AGG - chr4_3:67493536-67493555 Msa0657670:intron 25.0%
! GAACTTTCTATATCCAATTA+GGG - chr4_3:67493558-67493577 Msa0657670:intron 25.0%
!! GTATATGTATGTGTTTTCAA+AGG - chr4_3:67493625-67493644 Msa0657670:intron 25.0%
! AAATAAAGCCTAGAAAAATG+AGG + chr4_3:67493802-67493821 None:intergenic 25.0%
! ATATGCTTAGTAATCTTGTA+GGG + chr4_3:67494023-67494042 None:intergenic 25.0%
! TATATGCTTAGTAATCTTGT+AGG + chr4_3:67494024-67494043 None:intergenic 25.0%
! AACTCAATTTCTCTAAACAA+GGG - chr4_3:67494259-67494278 Msa0657670:intron 25.0%
!! GCTTAATATTTTATGCAGAT+TGG + chr4_3:67494310-67494329 None:intergenic 25.0%
! TTCAAATCTAATGTCTTCTT+TGG - chr4_3:67494534-67494553 Msa0657670:intron 25.0%
! TGTTGACATCATCATTATTA+TGG - chr4_3:67495094-67495113 Msa0657670:CDS 25.0%
! ATTATTATGGTCAAGTATGA+TGG - chr4_3:67495107-67495126 Msa0657670:CDS 25.0%
! TAGCAATCAAAAAAAGAAAC+TGG - chr4_3:67495176-67495195 Msa0657670:CDS 25.0%
! AGCAATCAAAAAAAGAAACT+GGG - chr4_3:67495177-67495196 Msa0657670:CDS 25.0%
! TGTCATTTCGATTAGGTTAT+TGG + chr4_3:67489159-67489178 None:intergenic 30.0%
GATCAACTAGCATAAGAAAA+TGG + chr4_3:67489440-67489459 None:intergenic 30.0%
ATAAGTAGATTGTACTTGGA+TGG - chr4_3:67489480-67489499 Msa0657670:CDS 30.0%
TAATCCCTGTCAATGAAAAT+AGG + chr4_3:67489776-67489795 None:intergenic 30.0%
AGGCATCATAATCATATACA+AGG - chr4_3:67489959-67489978 Msa0657670:CDS 30.0%
CTATCATGTATAAGAACCAT+AGG + chr4_3:67489999-67490018 None:intergenic 30.0%
ACTCATACTATAAGCACATA+CGG + chr4_3:67490074-67490093 None:intergenic 30.0%
TCAAATTAATCCTTGTACTG+GGG + chr4_3:67490144-67490163 None:intergenic 30.0%
CTCAAATTAATCCTTGTACT+GGG + chr4_3:67490145-67490164 None:intergenic 30.0%
ACTCAAATTAATCCTTGTAC+TGG + chr4_3:67490146-67490165 None:intergenic 30.0%
GCTCTCAAGAAATATCATTT+GGG + chr4_3:67490298-67490317 None:intergenic 30.0%
TGCTCTCAAGAAATATCATT+TGG + chr4_3:67490299-67490318 None:intergenic 30.0%
ATTATTACCTTTACTGTTGC+AGG - chr4_3:67490359-67490378 Msa0657670:intron 30.0%
! ACTAGCTTACATGACTTTAA+TGG - chr4_3:67490720-67490739 Msa0657670:intron 30.0%
CTAGCTTACATGACTTTAAT+GGG - chr4_3:67490721-67490740 Msa0657670:intron 30.0%
TAGAACTTCAACACTGTATT+AGG + chr4_3:67490837-67490856 None:intergenic 30.0%
GCATGTTTAGATACTTATCT+AGG - chr4_3:67490866-67490885 Msa0657670:intron 30.0%
GAATCCATTATCTAAGAAAG+TGG + chr4_3:67490899-67490918 None:intergenic 30.0%
TCTGTGCAATCTAATAACAT+AGG - chr4_3:67490941-67490960 Msa0657670:intron 30.0%
CAATCTAATAACATAGGTTG+TGG - chr4_3:67490947-67490966 Msa0657670:intron 30.0%
!! AAATGAAAGTACCTCTTATC+CGG + chr4_3:67490989-67491008 None:intergenic 30.0%
ATAACTTGAAATACAGTCAG+TGG - chr4_3:67491184-67491203 Msa0657670:intron 30.0%
GAAAAATGCAATAATGTTGG+TGG - chr4_3:67491582-67491601 Msa0657670:intron 30.0%
TACTTACTTGTTCAGCATTT+CGG + chr4_3:67491635-67491654 None:intergenic 30.0%
!!! TATCTTACTTGGCTACTTTT+GGG + chr4_3:67491864-67491883 None:intergenic 30.0%
! CTGTGATAATGTATCTTACT+TGG + chr4_3:67491875-67491894 None:intergenic 30.0%
ATAATTACATGAACAGGTGA+TGG - chr4_3:67491934-67491953 Msa0657670:intron 30.0%
GATCTTATTGGAAAACCATA+TGG - chr4_3:67491974-67491993 Msa0657670:intron 30.0%
ACTTAAATATACACAGCTTC+TGG - chr4_3:67492365-67492384 Msa0657670:intron 30.0%
TTTCCAACTCCTATAGTTAT+AGG + chr4_3:67492531-67492550 None:intergenic 30.0%
GTTGGAAATATCATTTCTGA+AGG - chr4_3:67492543-67492562 Msa0657670:CDS 30.0%
!!! TTTTTCATTGATGATGTCTC+CGG - chr4_3:67492569-67492588 Msa0657670:CDS 30.0%
GTCTAAACAATTTAGTACCT+TGG + chr4_3:67492680-67492699 None:intergenic 30.0%
GGTACTAAATTGTTTAGACT+AGG - chr4_3:67492681-67492700 Msa0657670:intron 30.0%
AGGAAATGACTACAAGATAT+AGG + chr4_3:67492720-67492739 None:intergenic 30.0%
! ACATACACTATTGTCAGTTT+TGG + chr4_3:67492862-67492881 None:intergenic 30.0%
!!! ACTTTCTCTGTTATTTTGCT+TGG + chr4_3:67493209-67493228 None:intergenic 30.0%
CAAAATAACAGAGAAAGTAG+AGG - chr4_3:67493211-67493230 Msa0657670:intron 30.0%
AGGAAACAAACAAAAAACAG+AGG - chr4_3:67493242-67493261 Msa0657670:intron 30.0%
TAATAAACTCCCTGATATGA+AGG + chr4_3:67493512-67493531 None:intergenic 30.0%
GGAACTTTCTATATCCAATT+AGG - chr4_3:67493557-67493576 Msa0657670:intron 30.0%
TTCTAAATTACAGCCCTAAT+TGG + chr4_3:67493574-67493593 None:intergenic 30.0%
!! ACAGTTTTCCTCATTTTTCT+AGG - chr4_3:67493791-67493810 Msa0657670:intron 30.0%
AAATGTATAGATATAGGCAC+TGG + chr4_3:67493848-67493867 None:intergenic 30.0%
! ACTTCTGAAAAAGTCAATTC+TGG - chr4_3:67493950-67493969 Msa0657670:CDS 30.0%
TATGCTTAGTAATCTTGTAG+GGG + chr4_3:67494022-67494041 None:intergenic 30.0%
AAAGCCTTACATAATGAAAC+TGG - chr4_3:67494063-67494082 Msa0657670:intron 30.0%
AAGCCTTACATAATGAAACT+GGG - chr4_3:67494064-67494083 Msa0657670:intron 30.0%
TTACCCAGTTTCATTATGTA+AGG + chr4_3:67494070-67494089 None:intergenic 30.0%
GAACTCAATTTCTCTAAACA+AGG - chr4_3:67494258-67494277 Msa0657670:intron 30.0%
! TATTTTATGCAGATTGGTAG+AGG + chr4_3:67494304-67494323 None:intergenic 30.0%
!! ATTTTCTCAGGTTGTTACAA+AGG - chr4_3:67494355-67494374 Msa0657670:intron 30.0%
GTCTTCTTTGGTTGAAAATA+TGG - chr4_3:67494546-67494565 Msa0657670:intron 30.0%
! ATGGTTTTTGCAAATTTTGC+AGG - chr4_3:67494871-67494890 Msa0657670:intron 30.0%
! TTTTTGCAAATTTTGCAGGT+TGG - chr4_3:67494875-67494894 Msa0657670:intron 30.0%
! TTTTGCAAATTTTGCAGGTT+GGG - chr4_3:67494876-67494895 Msa0657670:intron 30.0%
TACATGGCACATAAGTTTAA+CGG + chr4_3:67495235-67495254 None:intergenic 30.0%
AAGAACAACATGATACTACA+TGG + chr4_3:67495251-67495270 None:intergenic 30.0%
!! TATTGGCTTATTGCTAACAG+TGG + chr4_3:67489142-67489161 None:intergenic 35.0%
! ACAGTGTTGTCATTTCGATT+AGG + chr4_3:67489166-67489185 None:intergenic 35.0%
AACACTTGAGGTCAATTACT+TGG + chr4_3:67489709-67489728 None:intergenic 35.0%
ACCTCAAGTGTTAATGAATC+CGG - chr4_3:67489717-67489736 Msa0657670:intron 35.0%
!! AAGTTCTGAATCCTATCTCA+CGG + chr4_3:67489885-67489904 None:intergenic 35.0%
TGTATAAGAACCATAGGTGT+AGG + chr4_3:67489993-67490012 None:intergenic 35.0%
GAAAAAATTACCCCAGTACA+AGG - chr4_3:67490131-67490150 Msa0657670:CDS 35.0%
TTTGCACGAACATCTTCATT+TGG - chr4_3:67490542-67490561 Msa0657670:intron 35.0%
!! TTACATGACTTTAATGGGCT+TGG - chr4_3:67490726-67490745 Msa0657670:intron 35.0%
!! TACATGACTTTAATGGGCTT+GGG - chr4_3:67490727-67490746 Msa0657670:intron 35.0%
ATAAGAGCAATGCATTCACA+AGG - chr4_3:67491030-67491049 Msa0657670:intron 35.0%
TCCATACAGTGTAAGCAATT+GGG - chr4_3:67491105-67491124 Msa0657670:intron 35.0%
ATCTCTAACTGAAATCCCTA+GGG - chr4_3:67491386-67491405 Msa0657670:intron 35.0%
ATATCTATAGTTCGAGCTGT+TGG + chr4_3:67491434-67491453 None:intergenic 35.0%
! GCAAACGAGCTTATTTGTTT+TGG - chr4_3:67491833-67491852 Msa0657670:CDS 35.0%
!! GTATCTTACTTGGCTACTTT+TGG + chr4_3:67491865-67491884 None:intergenic 35.0%
TTGAACGTAGGTGATCTTAT+TGG - chr4_3:67491962-67491981 Msa0657670:intron 35.0%
! AAATGTTGATGAGTGCCATA+TGG + chr4_3:67491992-67492011 None:intergenic 35.0%
TTATGTAAGCTTCACCTTAC+TGG - chr4_3:67492012-67492031 Msa0657670:intron 35.0%
TCTCTCGTACAAGATATATC+TGG - chr4_3:67492085-67492104 Msa0657670:intron 35.0%
GATACTTCCCTAAGTAAGAA+AGG - chr4_3:67492238-67492257 Msa0657670:intron 35.0%
ATCCATGCCTTTCTTACTTA+GGG + chr4_3:67492248-67492267 None:intergenic 35.0%
TATCCATGCCTTTCTTACTT+AGG + chr4_3:67492249-67492268 None:intergenic 35.0%
TATGTAAAAGAGGTAGCCAT+AGG + chr4_3:67492326-67492345 None:intergenic 35.0%
GATAAGCAGCCTATAACTAT+AGG - chr4_3:67492519-67492538 Msa0657670:intron 35.0%
! GGAAATATCATTTCTGAAGG+TGG - chr4_3:67492546-67492565 Msa0657670:CDS 35.0%
AATAAGTTGCGAGTTATCCA+AGG - chr4_3:67492660-67492679 Msa0657670:intron 35.0%
AGAGTGGTTAAAAAGATCGT+GGG + chr4_3:67492960-67492979 None:intergenic 35.0%
AAGAGTGGTTAAAAAGATCG+TGG + chr4_3:67492961-67492980 None:intergenic 35.0%
AAAGAGAGGGAATGAGAAAT+GGG + chr4_3:67492991-67493010 None:intergenic 35.0%
TAAAGAGAGGGAATGAGAAA+TGG + chr4_3:67492992-67493011 None:intergenic 35.0%
! TTGGGAGGGAAATTTTGTTA+TGG + chr4_3:67493029-67493048 None:intergenic 35.0%
!!! TCAGGTTCAGGTTTTTAAGT+AGG - chr4_3:67493073-67493092 Msa0657670:intron 35.0%
GTGAAAGATCGTAAAAACGA+GGG - chr4_3:67493108-67493127 Msa0657670:intron 35.0%
AGAAAGTAGAGGAAAAACAG+AGG - chr4_3:67493222-67493241 Msa0657670:intron 35.0%
AAGAAAAACAGAGCAAACAG+AGG - chr4_3:67493282-67493301 Msa0657670:intron 35.0%
AATGTGTAACAGAATGGACA+TGG + chr4_3:67493443-67493462 None:intergenic 35.0%
ATGTCCATTCTGTTACACAT+TGG - chr4_3:67493442-67493461 Msa0657670:intron 35.0%
CGGTTTATTGAAATCGATAC+AGG + chr4_3:67493695-67493714 None:intergenic 35.0%
TAACAACGTAAAACGGAACA+TGG + chr4_3:67493738-67493757 None:intergenic 35.0%
! TATTTTATTCAAGCCACAGC+AGG - chr4_3:67493817-67493836 Msa0657670:intron 35.0%
TCTTAAACAGAAGCCAAGTT+CGG + chr4_3:67493980-67493999 None:intergenic 35.0%
TGATTGTATCTTGACTTCTC+AGG - chr4_3:67494175-67494194 Msa0657670:intron 35.0%
AGAAATTGAGTTCCATAGAC+AGG + chr4_3:67494251-67494270 None:intergenic 35.0%
!! ATCAGAATGGACTAAGTATC+AGG + chr4_3:67494337-67494356 None:intergenic 35.0%
! TAGTCCATTCTGATTTTCTC+AGG - chr4_3:67494343-67494362 Msa0657670:intron 35.0%
ACAACCTGAGAAAATCAGAA+TGG + chr4_3:67494350-67494369 None:intergenic 35.0%
TATCACTGTGGATGGAAAAA+AGG - chr4_3:67494471-67494490 Msa0657670:intron 35.0%
! TTATAACTGCAGTTTTCGCA+AGG + chr4_3:67494606-67494625 None:intergenic 35.0%
ATCGGTTGGCAGAAAATTAA+TGG - chr4_3:67494852-67494871 Msa0657670:intron 35.0%
! AAATTGACTAGTTACACCTC+TGG - chr4_3:67494899-67494918 Msa0657670:intron 35.0%
ATTGTTGGAGACAACATCAT+TGG - chr4_3:67494992-67495011 Msa0657670:intron 35.0%
! CAAGATTTTGAACTACCAGA+TGG + chr4_3:67495058-67495077 None:intergenic 35.0%
CTTCGAAGGTTGAAGTAAGA+TGG + chr4_3:67489194-67489213 None:intergenic 40.0%
AATAGTGAAGATGGAGACCA+TGG + chr4_3:67489221-67489240 None:intergenic 40.0%
GGTTTGAGGAATAGTGAAGA+TGG + chr4_3:67489230-67489249 None:intergenic 40.0%
TTGGGAGTAAACAAGGTTTG+AGG + chr4_3:67489244-67489263 None:intergenic 40.0%
TCTTGTTCTTCTTGTTGCGT+TGG + chr4_3:67489286-67489305 None:intergenic 40.0%
TGGAAATTACCAAGAAGTCG+TGG + chr4_3:67489373-67489392 None:intergenic 40.0%
TCCGGATTCATTAACACTTG+AGG + chr4_3:67489721-67489740 None:intergenic 40.0%
CCCTGTCAATGAAAATAGGA+GGG + chr4_3:67489772-67489791 None:intergenic 40.0%
! CCCTCCTATTTTCATTGACA+GGG - chr4_3:67489769-67489788 Msa0657670:intron 40.0%
TCCCTGTCAATGAAAATAGG+AGG + chr4_3:67489773-67489792 None:intergenic 40.0%
TACTAAAATGGCCGTGAGAT+AGG - chr4_3:67489871-67489890 Msa0657670:intron 40.0%
! TCATAACGATGAAGAAGCAC+TGG - chr4_3:67490437-67490456 Msa0657670:intron 40.0%
GAGAACATGCATTTAGCTAC+AGG + chr4_3:67490516-67490535 None:intergenic 40.0%
GTTGTGGATCTTTCACACTT+CGG - chr4_3:67490963-67490982 Msa0657670:intron 40.0%
TGCATTGCTCTTATGTGGAA+AGG + chr4_3:67491024-67491043 None:intergenic 40.0%
GTGAATGCATTGCTCTTATG+TGG + chr4_3:67491029-67491048 None:intergenic 40.0%
GTCCATACAGTGTAAGCAAT+TGG - chr4_3:67491104-67491123 Msa0657670:intron 40.0%
TCCCAATTGCTTACACTGTA+TGG + chr4_3:67491109-67491128 None:intergenic 40.0%
!! CAGAGTACTGCAAACTTTGA+GGG - chr4_3:67491235-67491254 Msa0657670:intron 40.0%
GATCTCTAACTGAAATCCCT+AGG - chr4_3:67491385-67491404 Msa0657670:intron 40.0%
AAAACAGTGTCACATCCCTA+GGG + chr4_3:67491404-67491423 None:intergenic 40.0%
AAAAACAGTGTCACATCCCT+AGG + chr4_3:67491405-67491424 None:intergenic 40.0%
CTATAGATATTGCACATGCG+TGG - chr4_3:67491444-67491463 Msa0657670:intron 40.0%
CTTGTTCAGCATTTCGGTAA+TGG + chr4_3:67491629-67491648 None:intergenic 40.0%
TTACTGTTAGGATTCTCCGA+CGG - chr4_3:67491666-67491685 Msa0657670:intron 40.0%
! ATTTTCGGTTTAACCTCCGT+CGG + chr4_3:67491685-67491704 None:intergenic 40.0%
!!! ACGAGCTTATTTGTTTTGGC+AGG - chr4_3:67491837-67491856 Msa0657670:CDS 40.0%
AGTTGTGAGAATGACAGAGT+CGG - chr4_3:67491900-67491919 Msa0657670:intron 40.0%
ATGACACGATTGAGCATGTA+AGG + chr4_3:67492183-67492202 None:intergenic 40.0%
TTCCCTAAGTAAGAAAGGCA+TGG - chr4_3:67492243-67492262 Msa0657670:intron 40.0%
!! TTTGCTTTTGGCAACGCTTT+TGG - chr4_3:67492283-67492302 Msa0657670:intron 40.0%
AGAGGTAGCCATAGGATAAT+AGG + chr4_3:67492318-67492337 None:intergenic 40.0%
CAGCCTATAACTATAGGAGT+TGG - chr4_3:67492525-67492544 Msa0657670:intron 40.0%
AGAATAGCTTTCCAGACAGA+TGG + chr4_3:67492603-67492622 None:intergenic 40.0%
TGGAAAGCTATTCTTGCTCA+AGG - chr4_3:67492609-67492628 Msa0657670:intron 40.0%
GGAAAGCTATTCTTGCTCAA+GGG - chr4_3:67492610-67492629 Msa0657670:intron 40.0%
GAAAGCTATTCTTGCTCAAG+GGG - chr4_3:67492611-67492630 Msa0657670:intron 40.0%
! TTGCAATGGGTTCTAATGCT+TGG - chr4_3:67492637-67492656 Msa0657670:intron 40.0%
CATTCAGAACAAGATATCCC+TGG - chr4_3:67492912-67492931 Msa0657670:intron 40.0%
AAGAGAGGGAATGAGAAATG+GGG + chr4_3:67492990-67493009 None:intergenic 40.0%
AAACCTGAACCTGACTACAT+TGG + chr4_3:67493067-67493086 None:intergenic 40.0%
GGTGAAAGATCGTAAAAACG+AGG - chr4_3:67493107-67493126 Msa0657670:intron 40.0%
ATCGTGCTTCAACTTTACTC+AGG + chr4_3:67493327-67493346 None:intergenic 40.0%
GTAAAGTTGAAGCACGATTG+AGG - chr4_3:67493329-67493348 Msa0657670:intron 40.0%
GGTTCCAATGTGTAACAGAA+TGG + chr4_3:67493449-67493468 None:intergenic 40.0%
AGAAGGGATGTATAGGATCA+GGG + chr4_3:67493471-67493490 None:intergenic 40.0%
GGGCTGTAATTTAGAAGTCT+TGG - chr4_3:67493578-67493597 Msa0657670:intron 40.0%
! GTATGTGTTTTCAAAGGCTC+TGG - chr4_3:67493631-67493650 Msa0657670:intron 40.0%
GAAATCGATACAGGCCTATA+GGG + chr4_3:67493686-67493705 None:intergenic 40.0%
TGAAATCGATACAGGCCTAT+AGG + chr4_3:67493687-67493706 None:intergenic 40.0%
! AGATGTGGAGAAACTTTTGC+CGG + chr4_3:67493768-67493787 None:intergenic 40.0%
CTAGCACTAAAAGCCTTCAT+GGG + chr4_3:67493892-67493911 None:intergenic 40.0%
TCTAGCACTAAAAGCCTTCA+TGG + chr4_3:67493893-67493912 None:intergenic 40.0%
TGTATCTTGACTTCTCAGGA+AGG - chr4_3:67494179-67494198 Msa0657670:intron 40.0%
!! AATGGACTAAGTATCAGGCA+AGG + chr4_3:67494332-67494351 None:intergenic 40.0%
TCCATCATATGTTATGAGCC+TGG + chr4_3:67494395-67494414 None:intergenic 40.0%
! CATATGATGGAGTCAAACAG+AGG - chr4_3:67494404-67494423 Msa0657670:intron 40.0%
ATGGAGTCAAACAGAGGTTA+TGG - chr4_3:67494410-67494429 Msa0657670:intron 40.0%
TGGAGTCAAACAGAGGTTAT+GGG - chr4_3:67494411-67494430 Msa0657670:intron 40.0%
GATAATACTACCAGGTTCTG+CGG + chr4_3:67494455-67494474 None:intergenic 40.0%
ACCTGGTAGTATTATCACTG+TGG - chr4_3:67494459-67494478 Msa0657670:intron 40.0%
TCCACAGTGATAATACTACC+AGG + chr4_3:67494463-67494482 None:intergenic 40.0%
GGTAGTATTATCACTGTGGA+TGG - chr4_3:67494463-67494482 Msa0657670:intron 40.0%
TCGCAAGGTATGGTTCAATT+GGG + chr4_3:67494591-67494610 None:intergenic 40.0%
TTCGCAAGGTATGGTTCAAT+TGG + chr4_3:67494592-67494611 None:intergenic 40.0%
!! TGCTGACTCATTGTACAAGA+TGG + chr4_3:67494781-67494800 None:intergenic 40.0%
AGGGAACTGTAGGATTACAA+AGG + chr4_3:67494827-67494846 None:intergenic 40.0%
! TCGGATTAGGTTACATCAAG+AGG - chr4_3:67494942-67494961 Msa0657670:intron 40.0%
GAAGGAGACAGTGTAATTGT+TGG - chr4_3:67494977-67494996 Msa0657670:intron 40.0%
AGACGCTGTTGAGAAAGAAA+AGG + chr4_3:67495034-67495053 None:intergenic 40.0%
CTGAGGTTTGGGAGTAAACA+AGG + chr4_3:67489251-67489270 None:intergenic 45.0%
! GTGAGCAGAATCTGAGGTTT+GGG + chr4_3:67489262-67489281 None:intergenic 45.0%
! TGTGAGCAGAATCTGAGGTT+TGG + chr4_3:67489263-67489282 None:intergenic 45.0%
! GCCCTCCTATTTTCATTGAC+AGG - chr4_3:67489768-67489787 Msa0657670:intron 45.0%
!! CCATTTTAGTAGCTGAGGTG+GGG + chr4_3:67489862-67489881 None:intergenic 45.0%
!! GCCATTTTAGTAGCTGAGGT+GGG + chr4_3:67489863-67489882 None:intergenic 45.0%
ATTATGATGCCTACGAGTCG+AGG + chr4_3:67489951-67489970 None:intergenic 45.0%
ACAGTGTCCTGCAACAGTAA+AGG + chr4_3:67490369-67490388 None:intergenic 45.0%
TACAACAACCCCATTGTCTG+CGG + chr4_3:67490466-67490485 None:intergenic 45.0%
GCTTGGGATGATATTAGCTC+AGG - chr4_3:67490743-67490762 Msa0657670:intron 45.0%
TTGCAGTACTCTGGTTGTGA+AGG + chr4_3:67491228-67491247 None:intergenic 45.0%
CCTCAAAGTTTGCAGTACTC+TGG + chr4_3:67491237-67491256 None:intergenic 45.0%
!! CCAGAGTACTGCAAACTTTG+AGG - chr4_3:67491234-67491253 Msa0657670:intron 45.0%
! TGCAAACTTTGAGGGTCTAC+AGG - chr4_3:67491243-67491262 Msa0657670:intron 45.0%
TATTGCACATGCGTGGATCA+TGG - chr4_3:67491451-67491470 Msa0657670:intron 45.0%
TGGTTTCAGCAGAGACTTGT+AGG - chr4_3:67491602-67491621 Msa0657670:intron 45.0%
! GTGATGGAAAGCTTGAACGT+AGG - chr4_3:67491950-67491969 Msa0657670:intron 45.0%
!! AGATATCCCTGGCTTTTGAG+AGG - chr4_3:67492923-67492942 Msa0657670:intron 45.0%
ACAATGCCTCTCAAAAGCCA+GGG + chr4_3:67492932-67492951 None:intergenic 45.0%
TACAATGCCTCTCAAAAGCC+AGG + chr4_3:67492933-67492952 None:intergenic 45.0%
GAAATGGGGAAGGAAAAGAG+TGG + chr4_3:67492976-67492995 None:intergenic 45.0%
TGGTGGCAAACAGAGGATTT+GGG + chr4_3:67493047-67493066 None:intergenic 45.0%
! TTGGTGGCAAACAGAGGATT+TGG + chr4_3:67493048-67493067 None:intergenic 45.0%
! ACTACATTGGTGGCAAACAG+AGG + chr4_3:67493054-67493073 None:intergenic 45.0%
TGTTTGCCACCAATGTAGTC+AGG - chr4_3:67493055-67493074 Msa0657670:intron 45.0%
TCGTAGCACGATTCGTAAGT+AGG - chr4_3:67493131-67493150 Msa0657670:CDS 45.0%
GCACGATTCGTAAGTAGGAT+CGG - chr4_3:67493136-67493155 Msa0657670:CDS 45.0%
GATTCGTAAGTAGGATCGGT+AGG - chr4_3:67493140-67493159 Msa0657670:CDS 45.0%
GAAGGGATGTATAGGATCAG+GGG + chr4_3:67493470-67493489 None:intergenic 45.0%
CAGAAGGGATGTATAGGATC+AGG + chr4_3:67493472-67493491 None:intergenic 45.0%
GGAGAACAGAAGGGATGTAT+AGG + chr4_3:67493478-67493497 None:intergenic 45.0%
!! ATAGGGAGATGGGTTGGAAA+CGG + chr4_3:67493669-67493688 None:intergenic 45.0%
TTTCCAACCCATCTCCCTAT+AGG - chr4_3:67493669-67493688 Msa0657670:intron 45.0%
ATACAGGCCTATAGGGAGAT+GGG + chr4_3:67493679-67493698 None:intergenic 45.0%
CCGAGATAGTTTGGAGGTTA+CGG + chr4_3:67493715-67493734 None:intergenic 45.0%
CCGTAACCTCCAAACTATCT+CGG - chr4_3:67493712-67493731 Msa0657670:intron 45.0%
GAGGAAAACTGTCACAGATG+TGG + chr4_3:67493783-67493802 None:intergenic 45.0%
GAAATGTGTCTAGCCCATGA+AGG - chr4_3:67493876-67493895 Msa0657670:intron 45.0%
TTGTAGGGGAATACGAACAC+TGG + chr4_3:67494008-67494027 None:intergenic 45.0%
CACAAACGAATTCAACGTCC+TGG - chr4_3:67494222-67494241 Msa0657670:intron 45.0%
AAACGAATTCAACGTCCTGG+AGG - chr4_3:67494225-67494244 Msa0657670:intron 45.0%
! CTCAGGTTGTTACAAAGGAC+AGG - chr4_3:67494360-67494379 Msa0657670:intron 45.0%
GCCAGGCTCATAACATATGA+TGG - chr4_3:67494391-67494410 Msa0657670:intron 45.0%
GGAGTCAAACAGAGGTTATG+GGG - chr4_3:67494412-67494431 Msa0657670:intron 45.0%
! ACTGCAGTTTTCGCAAGGTA+TGG + chr4_3:67494601-67494620 None:intergenic 45.0%
CCTACAGTTCCCTCTTGAAT+CGG - chr4_3:67494834-67494853 Msa0657670:intron 45.0%
! TTCTGCCAACCGATTCAAGA+GGG + chr4_3:67494846-67494865 None:intergenic 45.0%
! TTTCTGCCAACCGATTCAAG+AGG + chr4_3:67494847-67494866 None:intergenic 45.0%
! TGACTAGTTACACCTCTGGA+AGG - chr4_3:67494903-67494922 Msa0657670:intron 45.0%
!!! TATTTAAATTTAAAAGTTTT+GGG + chr4_3:67491064-67491083 None:intergenic 5.0%
!!! ATATTTAAATTTAAAAGTTT+TGG + chr4_3:67491065-67491084 None:intergenic 5.0%
TCAACCTTCGAAGCCAACCA+TGG - chr4_3:67489201-67489220 Msa0657670:three_prime_UTR 50.0%
GTGAAGATGGAGACCATGGT+TGG + chr4_3:67489217-67489236 None:intergenic 50.0%
GTTGGTGTGAGCAGAATCTG+AGG + chr4_3:67489268-67489287 None:intergenic 50.0%
ACCAAGAAGTCGTGGTCGAT+GGG + chr4_3:67489365-67489384 None:intergenic 50.0%
TACCAAGAAGTCGTGGTCGA+TGG + chr4_3:67489366-67489385 None:intergenic 50.0%
! TTTTAGTAGCTGAGGTGGGG+AGG + chr4_3:67489859-67489878 None:intergenic 50.0%
CCCCACCTCAGCTACTAAAA+TGG - chr4_3:67489859-67489878 Msa0657670:intron 50.0%
!! GGCCATTTTAGTAGCTGAGG+TGG + chr4_3:67489864-67489883 None:intergenic 50.0%
!! CACGGCCATTTTAGTAGCTG+AGG + chr4_3:67489867-67489886 None:intergenic 50.0%
! TCATAAGCTCCTCGACTCGT+AGG - chr4_3:67489939-67489958 Msa0657670:CDS 50.0%
GGATCGAGAACCTACACCTA+TGG - chr4_3:67489980-67489999 Msa0657670:CDS 50.0%
CAGGACACTGTCAAAACTGC+AGG - chr4_3:67490378-67490397 Msa0657670:intron 50.0%
TGGATCTTTCACACTTCGGC+CGG - chr4_3:67490967-67490986 Msa0657670:intron 50.0%
! AACTTTGAGGGTCTACAGGC+AGG - chr4_3:67491247-67491266 Msa0657670:intron 50.0%
! ACTTTGAGGGTCTACAGGCA+GGG - chr4_3:67491248-67491267 Msa0657670:intron 50.0%
GAGGGAATGAGAAATGGGGA+AGG + chr4_3:67492986-67493005 None:intergenic 50.0%
GGCAAACAGAGGATTTGGGA+GGG + chr4_3:67493043-67493062 None:intergenic 50.0%
TGGCAAACAGAGGATTTGGG+AGG + chr4_3:67493044-67493063 None:intergenic 50.0%
CCTGAACCTGACTACATTGG+TGG + chr4_3:67493064-67493083 None:intergenic 50.0%
CCACCAATGTAGTCAGGTTC+AGG - chr4_3:67493061-67493080 Msa0657670:intron 50.0%
! AAGCACGATTGAGGTGCCTT+GGG - chr4_3:67493338-67493357 Msa0657670:intron 50.0%
! ATTGAGGTGCCTTGGGATGT+AGG - chr4_3:67493345-67493364 Msa0657670:intron 50.0%
TCGTTCGATCCTACATCCCA+AGG + chr4_3:67493357-67493376 None:intergenic 50.0%
!! AGGATCGAGTGCTGGTTTGT+AGG + chr4_3:67493381-67493400 None:intergenic 50.0%
TTGTAGTCAGGATCGAGTGC+TGG + chr4_3:67493389-67493408 None:intergenic 50.0%
GCGTCGCAATCATTGTAGTC+AGG + chr4_3:67493401-67493420 None:intergenic 50.0%
TAGCGCGCACCTTCATATCA+GGG - chr4_3:67493500-67493519 Msa0657670:intron 50.0%
GATACAGGCCTATAGGGAGA+TGG + chr4_3:67493680-67493699 None:intergenic 50.0%
ACATGGCCGAGATAGTTTGG+AGG + chr4_3:67493721-67493740 None:intergenic 50.0%
GGAACATGGCCGAGATAGTT+TGG + chr4_3:67493724-67493743 None:intergenic 50.0%
!! CAATTCTGGAGTGCCGAACT+TGG - chr4_3:67493964-67493983 Msa0657670:CDS 50.0%
TCGTTTGTGAGCTCCATTCC+AGG + chr4_3:67494211-67494230 None:intergenic 50.0%
AAGGACAGGAGACTATAGCC+AGG - chr4_3:67494374-67494393 Msa0657670:intron 50.0%
ACAATGAGTCAGCACGCTAG+TGG - chr4_3:67494787-67494806 Msa0657670:intron 50.0%
CCGATTCAAGAGGGAACTGT+AGG + chr4_3:67494837-67494856 None:intergenic 50.0%
CAGTTCCCTCTTGAATCGGT+TGG - chr4_3:67494838-67494857 Msa0657670:intron 50.0%
AGGAAGCCATCGGAACACTT+CGG - chr4_3:67494923-67494942 Msa0657670:intron 50.0%
! CCTAATCCGAAGTGTTCCGA+TGG + chr4_3:67494932-67494951 None:intergenic 50.0%
CCATCGGAACACTTCGGATT+AGG - chr4_3:67494929-67494948 Msa0657670:intron 50.0%
AAGAGGCAAGCTGCTTCAGA+AGG - chr4_3:67494959-67494978 Msa0657670:intron 50.0%
!! GAGACCATGGTTGGCTTCGA+AGG + chr4_3:67489208-67489227 None:intergenic 55.0%
AAGAAGTCGTGGTCGATGGG+TGG + chr4_3:67489362-67489381 None:intergenic 55.0%
ACCCATCGACCACGACTTCT+TGG - chr4_3:67489361-67489380 Msa0657670:CDS 55.0%
! TGTCAAAACTGCAGGTGCCG+AGG - chr4_3:67490386-67490405 Msa0657670:intron 55.0%
GATCCCTTCCCCAGAAACCT+CGG + chr4_3:67490406-67490425 None:intergenic 55.0%
CACTGGATGCCGCAGACAAT+GGG - chr4_3:67490454-67490473 Msa0657670:intron 55.0%
ACTGGATGCCGCAGACAATG+GGG - chr4_3:67490455-67490474 Msa0657670:intron 55.0%
TCACACTTCGGCCGGATAAG+AGG - chr4_3:67490975-67490994 Msa0657670:intron 55.0%
CTACAGGCAGGGCAAGTATG+TGG - chr4_3:67491259-67491278 Msa0657670:intron 55.0%
CTGTTAGGATTCTCCGACGG+AGG - chr4_3:67491669-67491688 Msa0657670:intron 55.0%
TGCTCAAGGGGCTGTTGCAA+TGG - chr4_3:67492623-67492642 Msa0657670:intron 55.0%
GCTCAAGGGGCTGTTGCAAT+GGG - chr4_3:67492624-67492643 Msa0657670:intron 55.0%
! GAAGCACGATTGAGGTGCCT+TGG - chr4_3:67493337-67493356 Msa0657670:intron 55.0%
CGCGCTACTGGAGAACAGAA+GGG + chr4_3:67493487-67493506 None:intergenic 55.0%
! GATATGAAGGTGCGCGCTAC+TGG + chr4_3:67493499-67493518 None:intergenic 55.0%
GTAGCGCGCACCTTCATATC+AGG - chr4_3:67493499-67493518 Msa0657670:intron 55.0%
AGGCCTATAGGGAGATGGGT+TGG + chr4_3:67493675-67493694 None:intergenic 55.0%
AGTTCCATAGACAGGCCTCC+AGG + chr4_3:67494243-67494262 None:intergenic 55.0%
! CACCTCTGGAAGGAAGCCAT+CGG - chr4_3:67494913-67494932 Msa0657670:intron 55.0%
TTCCGATGGCTTCCTTCCAG+AGG + chr4_3:67494918-67494937 None:intergenic 55.0%
TCTCAACAGCGTCTGCCATC+TGG - chr4_3:67495040-67495059 Msa0657670:CDS 55.0%
AGTCGTGGTCGATGGGTGGA+GGG + chr4_3:67489358-67489377 None:intergenic 60.0%
AAGTCGTGGTCGATGGGTGG+AGG + chr4_3:67489359-67489378 None:intergenic 60.0%
!! ACTGCAGGTGCCGAGGTTTC+TGG - chr4_3:67490393-67490412 Msa0657670:intron 60.0%
!! CTGCAGGTGCCGAGGTTTCT+GGG - chr4_3:67490394-67490413 Msa0657670:intron 60.0%
!! TGCAGGTGCCGAGGTTTCTG+GGG - chr4_3:67490395-67490414 Msa0657670:intron 60.0%
! GTGCCGAGGTTTCTGGGGAA+GGG - chr4_3:67490400-67490419 Msa0657670:intron 60.0%
GCACTGGATGCCGCAGACAA+TGG - chr4_3:67490453-67490472 Msa0657670:intron 60.0%
CAGACAGATGGAGCAGCTGC+CGG + chr4_3:67492591-67492610 None:intergenic 60.0%
GCGCGCTACTGGAGAACAGA+AGG + chr4_3:67493488-67493507 None:intergenic 60.0%
!! GGCACTGGTAGTACCTGCTG+TGG + chr4_3:67493833-67493852 None:intergenic 60.0%
TTCTCAGGAAGGCCTGCTCC+TGG - chr4_3:67494190-67494209 Msa0657670:intron 60.0%
AGGAAGGCCTGCTCCTGGAA+TGG - chr4_3:67494195-67494214 Msa0657670:intron 60.0%
GTGAGCTCCATTCCAGGAGC+AGG + chr4_3:67494205-67494224 None:intergenic 60.0%
ACGTCCTGGAGGCCTGTCTA+TGG - chr4_3:67494236-67494255 Msa0657670:intron 60.0%
CTTTCTGCAGCCGCAGAACC+TGG - chr4_3:67494442-67494461 Msa0657670:intron 60.0%
GGTCGATGGGTGGAGGGGAA+AGG + chr4_3:67489352-67489371 None:intergenic 65.0%
GTCGTGGTCGATGGGTGGAG+GGG + chr4_3:67489357-67489376 None:intergenic 65.0%
! GGTGCCGAGGTTTCTGGGGA+AGG - chr4_3:67490399-67490418 Msa0657670:intron 65.0%
CGGCAGCTGCTCCATCTGTC+TGG - chr4_3:67492589-67492608 Msa0657670:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 67489100 67495302 67489100 ID=Msa0657670;Name=Msa0657670
chr4_3 mRNA 67489100 67495302 67489100 ID=Msa0657670-mRNA-1;Parent=Msa0657670;Name=Msa0657670-mRNA-1;_AED=0.07;_eAED=0.07;_QI=73|1|1|1|1|1|12|224|422
chr4_3 exon 67489100 67489509 67489100 ID=Msa0657670-mRNA-1:exon:19476;Parent=Msa0657670-mRNA-1
chr4_3 exon 67489910 67490037 67489910 ID=Msa0657670-mRNA-1:exon:19475;Parent=Msa0657670-mRNA-1
chr4_3 exon 67490122 67490205 67490122 ID=Msa0657670-mRNA-1:exon:19474;Parent=Msa0657670-mRNA-1
chr4_3 exon 67491721 67491886 67491721 ID=Msa0657670-mRNA-1:exon:19473;Parent=Msa0657670-mRNA-1
chr4_3 exon 67492387 67492452 67492387 ID=Msa0657670-mRNA-1:exon:19472;Parent=Msa0657670-mRNA-1
chr4_3 exon 67492527 67492614 67492527 ID=Msa0657670-mRNA-1:exon:19471;Parent=Msa0657670-mRNA-1
chr4_3 exon 67492755 67492819 67492755 ID=Msa0657670-mRNA-1:exon:19470;Parent=Msa0657670-mRNA-1
chr4_3 exon 67492930 67492995 67492930 ID=Msa0657670-mRNA-1:exon:19469;Parent=Msa0657670-mRNA-1
chr4_3 exon 67493129 67493202 67493129 ID=Msa0657670-mRNA-1:exon:19468;Parent=Msa0657670-mRNA-1
chr4_3 exon 67493406 67493439 67493406 ID=Msa0657670-mRNA-1:exon:19467;Parent=Msa0657670-mRNA-1
chr4_3 exon 67493920 67494021 67493920 ID=Msa0657670-mRNA-1:exon:19466;Parent=Msa0657670-mRNA-1
chr4_3 exon 67495020 67495302 67495020 ID=Msa0657670-mRNA-1:exon:19465;Parent=Msa0657670-mRNA-1
chr4_3 five_prime_UTR 67495230 67495302 67495230 ID=Msa0657670-mRNA-1:five_prime_utr;Parent=Msa0657670-mRNA-1
chr4_3 CDS 67495020 67495229 67495020 ID=Msa0657670-mRNA-1:cds;Parent=Msa0657670-mRNA-1
chr4_3 CDS 67493920 67494021 67493920 ID=Msa0657670-mRNA-1:cds;Parent=Msa0657670-mRNA-1
chr4_3 CDS 67493406 67493439 67493406 ID=Msa0657670-mRNA-1:cds;Parent=Msa0657670-mRNA-1
chr4_3 CDS 67493129 67493202 67493129 ID=Msa0657670-mRNA-1:cds;Parent=Msa0657670-mRNA-1
chr4_3 CDS 67492930 67492995 67492930 ID=Msa0657670-mRNA-1:cds;Parent=Msa0657670-mRNA-1
chr4_3 CDS 67492755 67492819 67492755 ID=Msa0657670-mRNA-1:cds;Parent=Msa0657670-mRNA-1
chr4_3 CDS 67492527 67492614 67492527 ID=Msa0657670-mRNA-1:cds;Parent=Msa0657670-mRNA-1
chr4_3 CDS 67492387 67492452 67492387 ID=Msa0657670-mRNA-1:cds;Parent=Msa0657670-mRNA-1
chr4_3 CDS 67491721 67491886 67491721 ID=Msa0657670-mRNA-1:cds;Parent=Msa0657670-mRNA-1
chr4_3 CDS 67490122 67490205 67490122 ID=Msa0657670-mRNA-1:cds;Parent=Msa0657670-mRNA-1
chr4_3 CDS 67489910 67490037 67489910 ID=Msa0657670-mRNA-1:cds;Parent=Msa0657670-mRNA-1
chr4_3 CDS 67489324 67489509 67489324 ID=Msa0657670-mRNA-1:cds;Parent=Msa0657670-mRNA-1
chr4_3 three_prime_UTR 67489100 67489323 67489100 ID=Msa0657670-mRNA-1:three_prime_utr;Parent=Msa0657670-mRNA-1
Gene Sequence

>Msa0657670

ATGACAACACTGTCACTGCCATCTTACTTCAACCTTCGAAGCCAACCATGGTCTCCATCTTCACTATTCCTCAAACCTTGTTTACTCCCAAACCTCAGATTCTGCTCACACCAACGCAACAAGAAGAACAAGAATCAAATTTCTTACTCTATTTCTGCTCAATCTTCATCTTTCGACCTTTCCCCTCCACCCATCGACCACGACTTCTTGGACACTGTCAAAACTGCAGGTGCCGAGGTTTCTGGGGAAGGGATCGTTGAAACATTTCATAACGATGAAGAAGCACTGGATGCCGCAGACAATGGGGTTGTTGTTGTGGATCTTTCACACTTCGGCCGGATAAGAGTCAGTGGAGATGATCGCGTTCAGTTCCTTCACAACCAGAGTACTGCAAACTTTGAGGGTCTACAGGCAGGGCAAGGATGTGACACTGTTTTTGTAACACCAACAGCTCGAACTATAGATATTGCACATGCGTGGATCATGAAAAATGCAATAATGTTGGTGGTTTCAGCAGAGACTTGTAGGACCATTACCGAAATGCTGAACAAGTACATATTTTTTGCTGATAAGGTAGAGATTCAAGACATCACGAAGCAAACGAGCTTATTTGTTTTGGCAGGACCCAAAAGTAGCCAAGTGATGGAAAGCTTGAACGTAGGTGATCTTATTGGAAAACCATATGGCACTCATCAACATTTTTATGTTGATAAGCAGCCTATAACTATAGGAGTTGGAAATATCATTTCTGAAGGTGGTTTTTCATTGATGATGTCTCCGGCAGCTGCTCCATCTGTCTGGAAAGCTATTCTTGCTCAAGGGGCTGTTGCAATGGGTTCTAATGCTTGGAATAAGTTGCGAGTTATCCAAGGAAGGCCTGCTCCTGGAATGGAGCTCACAAACGAATTCAACGTCCTGGAGGCCTGTCTATGGAACTCAATTTCTCTAAACAAGGGTTGTTACAAAGGACAGGAGACTATAGCCAGGCTCATAACATATGATGGAGTCAAACAGAGGTTATGGGGATTTCATCTTTCTGCAGCCGCAGAACCTGGTAGTATTATCACTGTGGATGGAAAAAAGGTTGGGAAATTGACTAGTTACACCTCTGGAAGGAAGCCATCGGAACACTTCGGATTAGGTTACATCAAGAGGCAAGCTGCTTCAGAAGGAGACAGTGTAATTGTTGGAGACAACATCATTGGAACAATAGTTGAAGTACCTTTTCTTTCTCAACAGCGTCTGCCATCTGGTAGTTCAAAATCTTGA

Protein sequence

>Msa0657670

MTTLSLPSYFNLRSQPWSPSSLFLKPCLLPNLRFCSHQRNKKNKNQISYSISAQSSSFDLSPPPIDHDFLDTVKTAGAEVSGEGIVETFHNDEEALDAADNGVVVVDLSHFGRIRVSGDDRVQFLHNQSTANFEGLQAGQGCDTVFVTPTARTIDIAHAWIMKNAIMLVVSAETCRTITEMLNKYIFFADKVEIQDITKQTSLFVLAGPKSSQVMESLNVGDLIGKPYGTHQHFYVDKQPITIGVGNIISEGGFSLMMSPAAAPSVWKAILAQGAVAMGSNAWNKLRVIQGRPAPGMELTNEFNVLEACLWNSISLNKGCYKGQETIARLITYDGVKQRLWGFHLSAAAEPGSIITVDGKKVGKLTSYTSGRKPSEHFGLGYIKRQAASEGDSVIVGDNIIGTIVEVPFLSQQRLPSGSSKS*