AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1038050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038050 MtrunA17_Chr7g0274601 95.205 292 7 2 1 292 1 285 0.0 554
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038050 AT1G08640.1 60.339 295 101 4 1 292 13 294 9.85e-120 345

Find 65 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGCCTTTGCTTTCGTTTAT+AGG 0.144704 7_1:-74830535 Msa1038050:CDS
GAAGAAGCAGAGATGATTAT+TGG 0.153927 7_1:+74833032 None:intergenic
CTTTGAATTGAATTTGAAAA+TGG 0.155783 7_1:-74833265 Msa1038050:exon
TGAGAATCATATAATTAATT+AGG 0.162529 7_1:+74827617 None:intergenic
AAAGAAGGAAGCTGAGATTA+AGG 0.221315 7_1:-74832792 Msa1038050:CDS
ACCTGAGAGAGGTTGAAAAT+TGG 0.242506 7_1:+74833160 None:intergenic
CTTGGTCCCCAAGGTATAAT+TGG 0.268204 7_1:+74831097 None:intergenic
ACTGCTCCGGTCGCTGGCCT+TGG 0.308462 7_1:-74830299 Msa1038050:CDS
TCAGTTGAGTAATCGGAAAA+AGG 0.325391 7_1:-74831705 Msa1038050:CDS
TGTTGTTGTTGTTGAATTTA+GGG 0.326426 7_1:+74833214 None:intergenic
AAATTCAATTCAAAGAGTTT+AGG 0.337707 7_1:+74833273 None:intergenic
ATCGTGTCAAATTTCTCAAT+AGG 0.342314 7_1:+74832836 None:intergenic
TGTTGTGTATGATGATCATT+TGG 0.358400 7_1:-74827662 Msa1038050:three_prime_UTR
TCGTGTCAAATTTCTCAATA+GGG 0.363102 7_1:+74832837 None:intergenic
CCTGAGAGAGGTTGAAAATT+GGG 0.377207 7_1:+74833161 None:intergenic
AATACATTTCTTTATAAAGT+AGG 0.384904 7_1:-74827719 Msa1038050:three_prime_UTR
AAGAAGCAGAGATGATTATT+GGG 0.389670 7_1:+74833033 None:intergenic
GAGAATCATATAATTAATTA+GGG 0.406869 7_1:+74827618 None:intergenic
TCTTCTTCTGCATCTGCTGC+AGG 0.410429 7_1:-74833002 Msa1038050:CDS
TGATGGCTCAGTTGAGTAAT+CGG 0.411340 7_1:-74831712 Msa1038050:CDS
ATGTATAGCTGTTTCATCCT+TGG 0.412262 7_1:-74830269 Msa1038050:intron
TATTGAGTAGCTACCTCATA+TGG 0.426931 7_1:+74832951 None:intergenic
AAAGAGACTGCTCCGGTCGC+TGG 0.428177 7_1:-74830305 Msa1038050:CDS
CCCATACGCAGTCCTTCTCC+TGG 0.433111 7_1:+74830328 None:intergenic
AAGAAGGAAGCTGAGATTAA+GGG 0.453722 7_1:-74832791 Msa1038050:CDS
TCCGTTCACAATAGAGGAAA+AGG 0.455870 7_1:+74827780 None:intergenic
CAAACAGCCAATTATACCTT+GGG 0.467405 7_1:-74831104 Msa1038050:CDS
GGCATATGACAAAGTTATGA+TGG 0.471615 7_1:-74831729 Msa1038050:CDS
CAGGAAGATGGTGAAGATCC+AGG 0.474884 7_1:-74830346 Msa1038050:CDS
ATCTCTTCTTTACAACAGTC+AGG 0.475809 7_1:-74829075 Msa1038050:intron
AAGAACTCCGTTCACAATAG+AGG 0.488837 7_1:+74827774 None:intergenic
TCCAGGAGAAGGACTGCGTA+TGG 0.496377 7_1:-74830329 Msa1038050:CDS
TTGTCTTTCTGCAGACAGCT+TGG 0.506000 7_1:-74830601 Msa1038050:intron
GCGGTCATCACTAACTTGAC+TGG 0.507173 7_1:+74827814 None:intergenic
CGGTGACTTCAATCCATATG+AGG 0.514774 7_1:-74832964 Msa1038050:intron
AAATTGGGAACGGAAATAGT+TGG 0.518850 7_1:+74833176 None:intergenic
AGGAACAAGAAGTGTTGGAG+TGG 0.521969 7_1:-74833343 Msa1038050:five_prime_UTR
TGACTGTTGTAAAGAAGAGA+TGG 0.528342 7_1:+74829077 None:intergenic
TATGGATTGAAGTCACCGTT+AGG 0.531428 7_1:+74832969 None:intergenic
AAATTGAATGCAGGTTTCAA+AGG 0.532979 7_1:-74831143 Msa1038050:intron
TGTTCAGGAACAAGAAGTGT+TGG 0.539296 7_1:-74833348 Msa1038050:five_prime_UTR
GTTGTGTATGATGATCATTT+GGG 0.545140 7_1:-74827661 Msa1038050:three_prime_UTR
AATGTTGATCCAGCTCGAAA+AGG 0.548403 7_1:-74831750 Msa1038050:intron
TATGAAACTCACATTAATTG+TGG 0.549027 7_1:+74830472 None:intergenic
GGTTTCCCAAGAAAACATCA+TGG 0.552983 7_1:-74833061 Msa1038050:CDS
CAATTATACCTTGGGGACCA+AGG 0.553731 7_1:-74831096 Msa1038050:intron
ACAAACAGCCAATTATACCT+TGG 0.553845 7_1:-74831105 Msa1038050:CDS
AACATAGTTGAGTCTGCAAG+TGG 0.554259 7_1:-74829107 Msa1038050:CDS
AAATGATGTGCGCATCAACT+TGG 0.557136 7_1:-74830702 Msa1038050:CDS
GTTGATAATCACCGCATCAT+CGG 0.577270 7_1:-74827900 Msa1038050:CDS
CCAGGAGAAGGACTGCGTAT+GGG 0.593890 7_1:-74830328 Msa1038050:CDS
GTATGGGAAAGAGACTGCTC+CGG 0.601329 7_1:-74830312 Msa1038050:CDS
GACTGTTGTAAAGAAGAGAT+GGG 0.602985 7_1:+74829078 None:intergenic
GATGGTGAAGATCCAGGAGA+AGG 0.603751 7_1:-74830340 Msa1038050:CDS
ATAACAAACCTTGGTCCCCA+AGG 0.616918 7_1:+74831088 None:intergenic
GGAACAAGAAGTGTTGGAGT+GGG 0.628937 7_1:-74833342 Msa1038050:five_prime_UTR
GCAGGAAGCACTAATCCTAA+CGG 0.643511 7_1:-74832984 Msa1038050:CDS
AAGCCTATAAACGAAAGCAA+AGG 0.649140 7_1:+74830532 None:intergenic
TAATGTTGGATACAGGAAGA+TGG 0.650849 7_1:-74830358 Msa1038050:intron
GAGAGGTTGAAAATTGGGAA+CGG 0.656054 7_1:+74833166 None:intergenic
AATCATATAATTAATTAGGG+AGG 0.658857 7_1:+74827621 None:intergenic
GAGTGAGTGTTACCTGAGAG+AGG 0.667674 7_1:+74833149 None:intergenic
AAGCATGAATGCCGATGATG+CGG 0.670839 7_1:+74827889 None:intergenic
AAACAGCCAATTATACCTTG+GGG 0.721557 7_1:-74831103 Msa1038050:CDS
GGAAAAGGAACACAGTACTG+CGG 0.757447 7_1:+74827795 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTAAAATAAAAAATAACAT+TGG + chr7_1:74828291-74828310 None:intergenic 10.0%
!! TTAAAGAAAAAATAATACTT+TGG - chr7_1:74830924-74830943 Msa1038050:intron 10.0%
!! TGTAATATGATAGAATAATA+AGG + chr7_1:74828070-74828089 None:intergenic 15.0%
!!! ATTATTGTTGTATAGATTTT+AGG - chr7_1:74828100-74828119 Msa1038050:intron 15.0%
!!! GCAAAAAAAAAATTTGATTT+TGG - chr7_1:74828259-74828278 Msa1038050:intron 15.0%
!!! TGGTTTTTAAATTTTCTAAT+GGG - chr7_1:74828549-74828568 Msa1038050:intron 15.0%
!! GATGTTAAAAAAAATATTGA+AGG - chr7_1:74828675-74828694 Msa1038050:intron 15.0%
!!! GAAATAATTAAAAGCATTAT+GGG + chr7_1:74829110-74829129 None:intergenic 15.0%
!!! TAATTATTTCGTTTTTTATG+AGG - chr7_1:74829120-74829139 Msa1038050:CDS 15.0%
!! AAGAAAAACATATAACTATA+TGG + chr7_1:74829157-74829176 None:intergenic 15.0%
!! ATTTAAATACAAATTACTCA+TGG + chr7_1:74830015-74830034 None:intergenic 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG - chr7_1:74831028-74831047 Msa1038050:intron 15.0%
!!! AATTTTCATTTAATCTTTGT+TGG - chr7_1:74831440-74831459 Msa1038050:intron 15.0%
!!! AATTTTAAAGAAGAAATTTG+TGG - chr7_1:74831481-74831500 Msa1038050:intron 15.0%
!! AATGAAATTTAATATTGCAA+AGG + chr7_1:74832542-74832561 None:intergenic 15.0%
!! TTTGCAATATTAAATTTCAT+TGG - chr7_1:74832541-74832560 Msa1038050:intron 15.0%
!! ATTAGTTATTTACAAATCAA+AGG - chr7_1:74832809-74832828 Msa1038050:CDS 15.0%
!! AATACATTTCTTTATAAAGT+AGG - chr7_1:74833247-74833266 Msa1038050:CDS 15.0%
!! GAGAATCATATAATTAATTA+GGG + chr7_1:74833351-74833370 None:intergenic 15.0%
!! TGAGAATCATATAATTAATT+AGG + chr7_1:74833352-74833371 None:intergenic 15.0%
!! AAATTCAATTCAAAGAGTTT+AGG + chr7_1:74827696-74827715 None:intergenic 20.0%
!! CTTTGAATTGAATTTGAAAA+TGG - chr7_1:74827701-74827720 Msa1038050:three_prime_UTR 20.0%
!! TTGACTATCAATATAGTTTA+GGG + chr7_1:74828333-74828352 None:intergenic 20.0%
!!! ACAGATTTTCATATACTTAA+GGG + chr7_1:74828362-74828381 None:intergenic 20.0%
!! AGACAAAAACAAAATGAAAA+AGG - chr7_1:74828448-74828467 Msa1038050:intron 20.0%
!! GACAAAAACAAAATGAAAAA+GGG - chr7_1:74828449-74828468 Msa1038050:intron 20.0%
!!! CTGGTTTTTAAATTTTCTAA+TGG - chr7_1:74828548-74828567 Msa1038050:intron 20.0%
!!! TGAAAAGTATGAGTATAAAT+AGG - chr7_1:74828604-74828623 Msa1038050:intron 20.0%
!!! GAAAAGTATGAGTATAAATA+GGG - chr7_1:74828605-74828624 Msa1038050:intron 20.0%
!! GAAATTAAAATCGATTGAAA+GGG + chr7_1:74828737-74828756 None:intergenic 20.0%
!! AGAAATTAAAATCGATTGAA+AGG + chr7_1:74828738-74828757 None:intergenic 20.0%
!!! CGAAATAATTAAAAGCATTA+TGG + chr7_1:74829111-74829130 None:intergenic 20.0%
!!! AATTTTGTATACGAAGAATT+TGG - chr7_1:74829544-74829563 Msa1038050:intron 20.0%
!!! ATTTTGTATACGAAGAATTT+GGG - chr7_1:74829545-74829564 Msa1038050:intron 20.0%
!! ATAATGATTAATCGTATTCT+TGG + chr7_1:74829630-74829649 None:intergenic 20.0%
!! AGCAAATAAACAAAATGTTA+GGG + chr7_1:74829780-74829799 None:intergenic 20.0%
!! AAGCAAATAAACAAAATGTT+AGG + chr7_1:74829781-74829800 None:intergenic 20.0%
!!! ATATTTTCTAAATTGAATGC+AGG - chr7_1:74829814-74829833 Msa1038050:intron 20.0%
!!! ATTTATTTTCATCTACAGTT+TGG - chr7_1:74830037-74830056 Msa1038050:intron 20.0%
!!! ATTCTAAGATTGTATTGAAT+AGG + chr7_1:74830531-74830550 None:intergenic 20.0%
!! TAATTCAACATGGTTAAAAA+TGG + chr7_1:74830557-74830576 None:intergenic 20.0%
!!! ATTCTATTGATAATTCAACA+TGG + chr7_1:74830567-74830586 None:intergenic 20.0%
!! AATAGTTGATTAGGATAATT+TGG + chr7_1:74830891-74830910 None:intergenic 20.0%
!! AAATTATCCTAATCAACTAT+TGG - chr7_1:74830890-74830909 Msa1038050:intron 20.0%
!! TGTAACATAGTATTAATTGA+AGG - chr7_1:74830953-74830972 Msa1038050:intron 20.0%
!! GTAACATAGTATTAATTGAA+GGG - chr7_1:74830954-74830973 Msa1038050:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr7_1:74830988-74831007 Msa1038050:intron 20.0%
!!! TGTCTTTTTAAAGAAAAAGA+TGG - chr7_1:74831132-74831151 Msa1038050:CDS 20.0%
!! TGTCATGATGAAAAATAATT+TGG + chr7_1:74831398-74831417 None:intergenic 20.0%
!! ATAAGAAAATAGAAAACTTC+AGG + chr7_1:74831745-74831764 None:intergenic 20.0%
!! AGAAACTATTAATCTTTATC+TGG + chr7_1:74831804-74831823 None:intergenic 20.0%
!! AGATAAAGATTAATAGTTTC+TGG - chr7_1:74831803-74831822 Msa1038050:intron 20.0%
!! ATATACACATTAAGAAACAT+TGG + chr7_1:74832419-74832438 None:intergenic 20.0%
!!! AGTTTGATTTCACTAATATA+TGG + chr7_1:74832640-74832659 None:intergenic 20.0%
!!! ACATCAAATTAGTTTTCTAA+AGG + chr7_1:74832788-74832807 None:intergenic 20.0%
!! AATCATATAATTAATTAGGG+AGG + chr7_1:74833348-74833367 None:intergenic 20.0%
!! TGTTGTTGTTGTTGAATTTA+GGG + chr7_1:74827755-74827774 None:intergenic 25.0%
!! TTGTTGTTGTTGTTGAATTT+AGG + chr7_1:74827756-74827775 None:intergenic 25.0%
!! TTATTCCATGATGTTTTCTT+GGG + chr7_1:74827913-74827932 None:intergenic 25.0%
! AGCATATACTAAGAAAAAGA+AGG - chr7_1:74828159-74828178 Msa1038050:intron 25.0%
! ATTAGTTAGTTAACATACTC+TGG + chr7_1:74828218-74828237 None:intergenic 25.0%
!!! TTAACTCTTCTCTATTTTTC+TGG - chr7_1:74828237-74828256 Msa1038050:intron 25.0%
! GTTGACTATCAATATAGTTT+AGG + chr7_1:74828334-74828353 None:intergenic 25.0%
!! GACAGATTTTCATATACTTA+AGG + chr7_1:74828363-74828382 None:intergenic 25.0%
! AGTATAAATAGGGTATGTTT+GGG - chr7_1:74828615-74828634 Msa1038050:intron 25.0%
!! AAATTTAATGTACTGACACA+TGG - chr7_1:74829177-74829196 Msa1038050:intron 25.0%
!! AATTTAATGTACTGACACAT+GGG - chr7_1:74829178-74829197 Msa1038050:intron 25.0%
!!! AGATACTTCTTAGTTTGTTT+TGG - chr7_1:74829378-74829397 Msa1038050:intron 25.0%
! TCTTCGTATACAAAATTGAT+AGG + chr7_1:74829541-74829560 None:intergenic 25.0%
!!! CATTGTAATGAAAAGTGTTA+AGG + chr7_1:74829598-74829617 None:intergenic 25.0%
! TGGGGGAATTAATTTATTTA+AGG + chr7_1:74829705-74829724 None:intergenic 25.0%
! AAATGTTAGGGTGAAATATT+GGG + chr7_1:74829768-74829787 None:intergenic 25.0%
! AAAATGTTAGGGTGAAATAT+TGG + chr7_1:74829769-74829788 None:intergenic 25.0%
! ATGGCATGTTTAATTCATAA+GGG + chr7_1:74829996-74830015 None:intergenic 25.0%
! ATAATGTCAAAAAATCCAAG+TGG + chr7_1:74830204-74830223 None:intergenic 25.0%
!! TTTTGTGAGTAGTAAATGAA+TGG - chr7_1:74830300-74830319 Msa1038050:CDS 25.0%
! TATGAAACTCACATTAATTG+TGG + chr7_1:74830497-74830516 None:intergenic 25.0%
!! TTCATGAATCATGATAATGT+TGG - chr7_1:74830594-74830613 Msa1038050:intron 25.0%
! AAACAAACCAATAGTTGATT+AGG + chr7_1:74830900-74830919 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + chr7_1:74831250-74831269 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - chr7_1:74831249-74831268 Msa1038050:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - chr7_1:74831262-74831281 Msa1038050:intron 25.0%
! TGTCAAAATATCATTTCTCT+TGG - chr7_1:74831366-74831385 Msa1038050:intron 25.0%
! TTTAAAGAAGAAATTTGTGG+CGG - chr7_1:74831484-74831503 Msa1038050:intron 25.0%
!! AAAAATTGATTTAGCCAAGA+AGG + chr7_1:74831933-74831952 None:intergenic 25.0%
!! TGTATTTTTCTTAGGAATTC+TGG - chr7_1:74831990-74832009 Msa1038050:intron 25.0%
!! TTTCTTTTGCATTCTTTATG+TGG - chr7_1:74832024-74832043 Msa1038050:intron 25.0%
!! TTCTTTTGCATTCTTTATGT+GGG - chr7_1:74832025-74832044 Msa1038050:intron 25.0%
!!! AGTATTACTTTTTCAACACA+TGG - chr7_1:74832149-74832168 Msa1038050:intron 25.0%
!! AAAAGTATGGCACATTTAAA+TGG + chr7_1:74832190-74832209 None:intergenic 25.0%
!!! AAGATTGATTTTAAAAGCAC+AGG - chr7_1:74832459-74832478 Msa1038050:intron 25.0%
! CGAATTGCAATATATAGAAA+AGG + chr7_1:74832506-74832525 None:intergenic 25.0%
! TCCTTAAAATGACATTAACT+CGG + chr7_1:74832705-74832724 None:intergenic 25.0%
! ATATACACTGGTAATAAATG+TGG + chr7_1:74832895-74832914 None:intergenic 25.0%
! AACCCAATACATTAAACAAT+GGG + chr7_1:74833005-74833024 None:intergenic 25.0%
! TAACCCAATACATTAAACAA+TGG + chr7_1:74833006-74833025 None:intergenic 25.0%
!!! GCATTCATGCTTTTTATTTT+GGG - chr7_1:74833088-74833107 Msa1038050:intron 25.0%
!! TGGGATCTTTTTATAGATAA+TGG - chr7_1:74833107-74833126 Msa1038050:intron 25.0%
!!! AGTGTTTTTTTGGAAGAAGA+AGG + chr7_1:74827855-74827874 None:intergenic 30.0%
!!! GTAAGAAAGCAGTGTTTTTT+TGG + chr7_1:74827865-74827884 None:intergenic 30.0%
AAAAAACACTGCTTTCTTAC+TGG - chr7_1:74827865-74827884 Msa1038050:CDS 30.0%
AAAAACACTGCTTTCTTACT+GGG - chr7_1:74827866-74827885 Msa1038050:CDS 30.0%
! GTTATTCCATGATGTTTTCT+TGG + chr7_1:74827914-74827933 None:intergenic 30.0%
AAGAAGCAGAGATGATTATT+GGG + chr7_1:74827936-74827955 None:intergenic 30.0%
TCGTGTCAAATTTCTCAATA+GGG + chr7_1:74828132-74828151 None:intergenic 30.0%
ATCGTGTCAAATTTCTCAAT+AGG + chr7_1:74828133-74828152 None:intergenic 30.0%
TCTCTAACATCTTAATAGCA+GGG - chr7_1:74828390-74828409 Msa1038050:intron 30.0%
GAGTATAAATAGGGTATGTT+TGG - chr7_1:74828614-74828633 Msa1038050:intron 30.0%
GACAATTGAACTGAAATACT+GGG - chr7_1:74828821-74828840 Msa1038050:intron 30.0%
AGAAAAGAATAGAGACCTTA+AGG + chr7_1:74828960-74828979 None:intergenic 30.0%
! GTCTCTATTCTTTTCTTCTA+AGG - chr7_1:74828964-74828983 Msa1038050:intron 30.0%
CAAATTTGTAGAAAGTCACT+TGG + chr7_1:74829086-74829105 None:intergenic 30.0%
! TGTGACTTTTGGATCATTTA+AGG - chr7_1:74829285-74829304 Msa1038050:intron 30.0%
! TGGATCATTTAAGGTAAAGT+AGG - chr7_1:74829294-74829313 Msa1038050:intron 30.0%
! GTTTTGTGTGCAATTTCAAA+TGG + chr7_1:74829338-74829357 None:intergenic 30.0%
TTGATGTGTTATGCATTCAT+TGG - chr7_1:74829436-74829455 Msa1038050:intron 30.0%
! AATTATTGCTGCTTCATCAA+AGG + chr7_1:74829466-74829485 None:intergenic 30.0%
AATATAGCATAGATGATGTG+GGG + chr7_1:74829723-74829742 None:intergenic 30.0%
CAATATAGCATAGATGATGT+GGG + chr7_1:74829724-74829743 None:intergenic 30.0%
ACAATATAGCATAGATGATG+TGG + chr7_1:74829725-74829744 None:intergenic 30.0%
AATGTTAGGGTGAAATATTG+GGG + chr7_1:74829767-74829786 None:intergenic 30.0%
AAATTGAATGCAGGTTTCAA+AGG - chr7_1:74829823-74829842 Msa1038050:intron 30.0%
TGGCATGTTTAATTCATAAG+GGG + chr7_1:74829995-74830014 None:intergenic 30.0%
CATGGCATGTTTAATTCATA+AGG + chr7_1:74829997-74830016 None:intergenic 30.0%
! ATTTTCATCTACAGTTTGGT+AGG - chr7_1:74830041-74830060 Msa1038050:intron 30.0%
AACATGATGAAATTTGACAG+TGG + chr7_1:74830119-74830138 None:intergenic 30.0%
! ACATTAATTGTGGAGCTTTT+CGG + chr7_1:74830487-74830506 None:intergenic 30.0%
GTGAGTTTCATATTCTATGA+CGG - chr7_1:74830505-74830524 Msa1038050:CDS 30.0%
! ATCATGATAATGTTGGATAC+AGG - chr7_1:74830601-74830620 Msa1038050:intron 30.0%
! TGATGATTCATCTGATCTTT+TGG - chr7_1:74830722-74830741 Msa1038050:CDS 30.0%
AGACAATTGCACACATATTA+AGG - chr7_1:74830829-74830848 Msa1038050:intron 30.0%
! AGGGAGTACAATAATTAACA+AGG - chr7_1:74831077-74831096 Msa1038050:intron 30.0%
ACTCTTCCACTAAAGTAAAA+CGG + chr7_1:74831185-74831204 None:intergenic 30.0%
TCAACAAAGCTGTCATTAAA+TGG + chr7_1:74831224-74831243 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr7_1:74831275-74831294 Msa1038050:intron 30.0%
! AACCACTTTATGACAACTTT+TGG + chr7_1:74831347-74831366 None:intergenic 30.0%
CAAAATATCATTTCTCTTGG+TGG - chr7_1:74831369-74831388 Msa1038050:intron 30.0%
!!! TTTCTGGTACATTTTTTTGC+AGG - chr7_1:74831819-74831838 Msa1038050:intron 30.0%
TAAATCAATTCAGTCCTTCT+TGG - chr7_1:74831916-74831935 Msa1038050:intron 30.0%
CATGGATCATATTATTCACA+TGG + chr7_1:74831962-74831981 None:intergenic 30.0%
ATTACTAAATCGCGGAAATA+TGG + chr7_1:74832292-74832311 None:intergenic 30.0%
GACAATTCATTACTAAATCG+CGG + chr7_1:74832300-74832319 None:intergenic 30.0%
AGTAATGAATTGTCAGATAG+TGG - chr7_1:74832306-74832325 Msa1038050:intron 30.0%
CACATTAAGAAACATTGGAT+TGG + chr7_1:74832414-74832433 None:intergenic 30.0%
!!! ACCGAGTTAATGTCATTTTA+AGG - chr7_1:74832701-74832720 Msa1038050:intron 30.0%
TGTTGACGATGTAAAATTGA+AGG - chr7_1:74832734-74832753 Msa1038050:intron 30.0%
ATTGAAGGATCAATATGATG+CGG - chr7_1:74832749-74832768 Msa1038050:intron 30.0%
TTACCAGTGTATATTGTTCT+TGG - chr7_1:74832901-74832920 Msa1038050:intron 30.0%
!! AATTAGTCTTGTCTTGAATC+AGG - chr7_1:74832947-74832966 Msa1038050:intron 30.0%
TGTCCCATTGTTTAATGTAT+TGG - chr7_1:74832999-74833018 Msa1038050:CDS 30.0%
GTCCCATTGTTTAATGTATT+GGG - chr7_1:74833000-74833019 Msa1038050:CDS 30.0%
! ACGATTTTCATTGTATTTGC+AGG - chr7_1:74833042-74833061 Msa1038050:CDS 30.0%
!! GGCATTCATGCTTTTTATTT+TGG - chr7_1:74833087-74833106 Msa1038050:intron 30.0%
TGTTGTGTATGATGATCATT+TGG - chr7_1:74833304-74833323 Msa1038050:five_prime_UTR 30.0%
GTTGTGTATGATGATCATTT+GGG - chr7_1:74833305-74833324 Msa1038050:five_prime_UTR 30.0%
AAATTGGGAACGGAAATAGT+TGG + chr7_1:74827793-74827812 None:intergenic 35.0%
!!! GTTTTTTTGGAAGAAGAAGG+AGG + chr7_1:74827852-74827871 None:intergenic 35.0%
GAAGAAGCAGAGATGATTAT+TGG + chr7_1:74827937-74827956 None:intergenic 35.0%
TATTGAGTAGCTACCTCATA+TGG + chr7_1:74828018-74828037 None:intergenic 35.0%
AAAGAAGGAAGCTGAGATTA+AGG - chr7_1:74828174-74828193 Msa1038050:intron 35.0%
AAGAAGGAAGCTGAGATTAA+GGG - chr7_1:74828175-74828194 Msa1038050:intron 35.0%
GTCTCTAACATCTTAATAGC+AGG - chr7_1:74828389-74828408 Msa1038050:intron 35.0%
! AAATAGGGTATGTTTGGGTT+TGG - chr7_1:74828620-74828639 Msa1038050:intron 35.0%
ACCATGTGAGTTGTACTTAA+GGG + chr7_1:74828788-74828807 None:intergenic 35.0%
TACCATGTGAGTTGTACTTA+AGG + chr7_1:74828789-74828808 None:intergenic 35.0%
CAACTCACATGGTAAAAAGT+TGG - chr7_1:74828795-74828814 Msa1038050:intron 35.0%
TCACATGGTAAAAAGTTGGA+GGG - chr7_1:74828799-74828818 Msa1038050:intron 35.0%
GGACAATTGAACTGAAATAC+TGG - chr7_1:74828820-74828839 Msa1038050:intron 35.0%
TGTAAAGACTAGAGACCTTA+AGG + chr7_1:74829019-74829038 None:intergenic 35.0%
TTGTAGAAAGTCACTTGGTT+TGG + chr7_1:74829081-74829100 None:intergenic 35.0%
GGCATATGACAAAGTTATGA+TGG - chr7_1:74829237-74829256 Msa1038050:intron 35.0%
TCAGTTGAGTAATCGGAAAA+AGG - chr7_1:74829261-74829280 Msa1038050:intron 35.0%
CAGTTGAGTAATCGGAAAAA+GGG - chr7_1:74829262-74829281 Msa1038050:intron 35.0%
CACAAAACATGAAGACATGA+CGG - chr7_1:74829350-74829369 Msa1038050:intron 35.0%
TTGTATACGAAGAATTTGGG+AGG - chr7_1:74829548-74829567 Msa1038050:intron 35.0%
ATATAGCATAGATGATGTGG+GGG + chr7_1:74829722-74829741 None:intergenic 35.0%
ATGTTAGGGTGAAATATTGG+GGG + chr7_1:74829766-74829785 None:intergenic 35.0%
ACAAACAGCCAATTATACCT+TGG - chr7_1:74829861-74829880 Msa1038050:intron 35.0%
CAAACAGCCAATTATACCTT+GGG - chr7_1:74829862-74829881 Msa1038050:intron 35.0%
AAACAGCCAATTATACCTTG+GGG - chr7_1:74829863-74829882 Msa1038050:intron 35.0%
TGACAAGCAATAACAAACCT+TGG + chr7_1:74829890-74829909 None:intergenic 35.0%
!!! TGACATGTTAGTTTTGTTGC+TGG - chr7_1:74829917-74829936 Msa1038050:intron 35.0%
TTCATAAGGGGGAAATAACA+TGG + chr7_1:74829983-74830002 None:intergenic 35.0%
GGCATGTTTAATTCATAAGG+GGG + chr7_1:74829994-74830013 None:intergenic 35.0%
GATGAAATTTGACAGTGGAA+AGG + chr7_1:74830114-74830133 None:intergenic 35.0%
TTGTACTTCGATGCAATTTC+AGG - chr7_1:74830224-74830243 Msa1038050:intron 35.0%
TAGCCTTTGCTTTCGTTTAT+AGG - chr7_1:74830431-74830450 Msa1038050:intron 35.0%
AAGCCTATAAACGAAAGCAA+AGG + chr7_1:74830437-74830456 None:intergenic 35.0%
TAATGTTGGATACAGGAAGA+TGG - chr7_1:74830608-74830627 Msa1038050:intron 35.0%
AGCTATACATCCAAAAACCA+AGG + chr7_1:74830687-74830706 None:intergenic 35.0%
! ATGTATAGCTGTTTCATCCT+TGG - chr7_1:74830697-74830716 Msa1038050:CDS 35.0%
TCAGATGAATCATCATACCA+AGG + chr7_1:74830717-74830736 None:intergenic 35.0%
TTCTCTGATATCCCAGTTTA+TGG - chr7_1:74830762-74830781 Msa1038050:intron 35.0%
TCTCTGATATCCCAGTTTAT+GGG - chr7_1:74830763-74830782 Msa1038050:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr7_1:74831054-74831073 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr7_1:74831054-74831073 Msa1038050:intron 35.0%
CTCTTCCACTAAAGTAAAAC+GGG + chr7_1:74831184-74831203 None:intergenic 35.0%
GTCCAAAAGTTGTCATAAAG+TGG - chr7_1:74831342-74831361 Msa1038050:intron 35.0%
! ATTAGACTTTTGTACTGTGC+TGG - chr7_1:74831520-74831539 Msa1038050:intron 35.0%
AAGCAATAACATGCCAAGTT+TGG + chr7_1:74831567-74831586 None:intergenic 35.0%
! ACTTGGCATGTTATTGCTTT+TGG - chr7_1:74831568-74831587 Msa1038050:intron 35.0%
!! CTTGGCATGTTATTGCTTTT+GGG - chr7_1:74831569-74831588 Msa1038050:intron 35.0%
GACTGTTGTAAAGAAGAGAT+GGG + chr7_1:74831891-74831910 None:intergenic 35.0%
TGACTGTTGTAAAGAAGAGA+TGG + chr7_1:74831892-74831911 None:intergenic 35.0%
ATCTCTTCTTTACAACAGTC+AGG - chr7_1:74831891-74831910 Msa1038050:intron 35.0%
! TCCTGCAGTGTATTTTTCTT+AGG - chr7_1:74831982-74832001 Msa1038050:intron 35.0%
TCCTAAGAAAAATACACTGC+AGG + chr7_1:74831986-74832005 None:intergenic 35.0%
TAGGACAACGAGGATTAAAA+TGG + chr7_1:74832066-74832085 None:intergenic 35.0%
CACAATTCAAAACTGTGTCT+TGG - chr7_1:74832119-74832138 Msa1038050:intron 35.0%
TAGTCAAATAGCAGCTATAG+TGG - chr7_1:74832235-74832254 Msa1038050:intron 35.0%
AGTCAAATAGCAGCTATAGT+GGG - chr7_1:74832236-74832255 Msa1038050:intron 35.0%
CAATCGCAGATTGCAAAAAA+TGG + chr7_1:74832380-74832399 None:intergenic 35.0%
CAACCGTAGAGTAATCTTAT+TGG - chr7_1:74832579-74832598 Msa1038050:intron 35.0%
GGACCAATAAGATTACTCTA+CGG + chr7_1:74832585-74832604 None:intergenic 35.0%
! GACATTAACTCGGTTTTTGA+AGG + chr7_1:74832695-74832714 None:intergenic 35.0%
CAACCAAGAACAATATACAC+TGG + chr7_1:74832907-74832926 None:intergenic 35.0%
CAGTGTATATTGTTCTTGGT+TGG - chr7_1:74832905-74832924 Msa1038050:intron 35.0%
! GGTTGGTTGACTTAAAATCA+TGG - chr7_1:74832922-74832941 Msa1038050:intron 35.0%
! TCCTTTTCCTCTATTGTGAA+CGG - chr7_1:74833185-74833204 Msa1038050:CDS 35.0%
! TGTTCAGGAACAAGAAGTGT+TGG - chr7_1:74827618-74827637 Msa1038050:three_prime_UTR 40.0%
GAGAGGTTGAAAATTGGGAA+CGG + chr7_1:74827803-74827822 None:intergenic 40.0%
CCTGAGAGAGGTTGAAAATT+GGG + chr7_1:74827808-74827827 None:intergenic 40.0%
ACCTGAGAGAGGTTGAAAAT+TGG + chr7_1:74827809-74827828 None:intergenic 40.0%
!! TTTTTGGAAGAAGAAGGAGG+AGG + chr7_1:74827849-74827868 None:intergenic 40.0%
!! CTGGGTTTGGTTCAATTTTC+AGG - chr7_1:74827884-74827903 Msa1038050:CDS 40.0%
GGTTTCCCAAGAAAACATCA+TGG - chr7_1:74827905-74827924 Msa1038050:CDS 40.0%
! TATGGATTGAAGTCACCGTT+AGG + chr7_1:74828000-74828019 None:intergenic 40.0%
AATAGCAGGGACTAGATTGA+TGG - chr7_1:74828403-74828422 Msa1038050:intron 40.0%
TCCCTTAAGTACAACTCACA+TGG - chr7_1:74828784-74828803 Msa1038050:intron 40.0%
CTCACATGGTAAAAAGTTGG+AGG - chr7_1:74828798-74828817 Msa1038050:intron 40.0%
!! ACATACTAAGTGCTGAGAAG+TGG + chr7_1:74828871-74828890 None:intergenic 40.0%
!!! GCGGCATTTTTTCGTTTCAA+TGG + chr7_1:74828903-74828922 None:intergenic 40.0%
TTAAGGTTATGTGTGGCAGT+TGG + chr7_1:74828943-74828962 None:intergenic 40.0%
AACTGCCACACATAACCTTA+AGG - chr7_1:74828942-74828961 Msa1038050:intron 40.0%
AGAGACCTTAAGGTTATGTG+TGG + chr7_1:74828950-74828969 None:intergenic 40.0%
GAGACCTTAAGGCTATGTTT+GGG + chr7_1:74829008-74829027 None:intergenic 40.0%
AGAGACCTTAAGGCTATGTT+TGG + chr7_1:74829009-74829028 None:intergenic 40.0%
AATGTTGATCCAGCTCGAAA+AGG - chr7_1:74829216-74829235 Msa1038050:intron 40.0%
TGATGGCTCAGTTGAGTAAT+CGG - chr7_1:74829254-74829273 Msa1038050:intron 40.0%
GTGTGCAATTTCAAATGGAC+AGG + chr7_1:74829333-74829352 None:intergenic 40.0%
GTGAAATATTGGGGGGATAT+AGG + chr7_1:74829758-74829777 None:intergenic 40.0%
TGTTAGGGTGAAATATTGGG+GGG + chr7_1:74829765-74829784 None:intergenic 40.0%
CCAAGTGGCTGATAATAGAA+TGG + chr7_1:74830189-74830208 None:intergenic 40.0%
CCATTCTATTATCAGCCACT+TGG - chr7_1:74830186-74830205 Msa1038050:intron 40.0%
AAATGATGTGCGCATCAACT+TGG - chr7_1:74830264-74830283 Msa1038050:intron 40.0%
GCAAAGGCTAAAAACTGCAA+AGG + chr7_1:74830421-74830440 None:intergenic 40.0%
ATTACAGAGGCCCATAAACT+GGG + chr7_1:74830776-74830795 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr7_1:74831058-74831077 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr7_1:74831058-74831077 Msa1038050:intron 40.0%
CCACTAAAGTAAAACGGGAA+AGG + chr7_1:74831179-74831198 None:intergenic 40.0%
! CCTTTCCCGTTTTACTTTAG+TGG - chr7_1:74831176-74831195 Msa1038050:intron 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG - chr7_1:74831285-74831304 Msa1038050:intron 40.0%
AACATAGTTGAGTCTGCAAG+TGG - chr7_1:74831859-74831878 Msa1038050:intron 40.0%
GAAAAATACACTGCAGGACA+TGG + chr7_1:74831980-74831999 None:intergenic 40.0%
TTAATCCTCGTTGTCCTATG+CGG - chr7_1:74832068-74832087 Msa1038050:intron 40.0%
TCAACACATGGAAAGCTGTT+TGG - chr7_1:74832161-74832180 Msa1038050:intron 40.0%
! ATGTGCCATACTTTTGCACT+AGG - chr7_1:74832195-74832214 Msa1038050:intron 40.0%
GCTATCCTAGTGCAAAAGTA+TGG + chr7_1:74832203-74832222 None:intergenic 40.0%
ACTAAATCGCGGAAATATGG+CGG + chr7_1:74832289-74832308 None:intergenic 40.0%
GCAAAAAATGGCAGTTGACA+AGG + chr7_1:74832368-74832387 None:intergenic 40.0%
ATTGCAAAGGACACATTGAC+AGG + chr7_1:74832529-74832548 None:intergenic 40.0%
GATCAATATGATGCGGTGAT+CGG - chr7_1:74832756-74832775 Msa1038050:intron 40.0%
TCAAACTGGTAACATGACAC+TGG + chr7_1:74832835-74832854 None:intergenic 40.0%
GTGTCATGTTACCAGTTTGA+TGG - chr7_1:74832835-74832854 Msa1038050:CDS 40.0%
!! GTTGATAATCACCGCATCAT+CGG - chr7_1:74833066-74833085 Msa1038050:intron 40.0%
TCCGTTCACAATAGAGGAAA+AGG + chr7_1:74833189-74833208 None:intergenic 40.0%
AAGAACTCCGTTCACAATAG+AGG + chr7_1:74833195-74833214 None:intergenic 40.0%
!! AGGAACAAGAAGTGTTGGAG+TGG - chr7_1:74827623-74827642 Msa1038050:three_prime_UTR 45.0%
!! GGAACAAGAAGTGTTGGAGT+GGG - chr7_1:74827624-74827643 Msa1038050:three_prime_UTR 45.0%
! CCCAATTTTCAACCTCTCTC+AGG - chr7_1:74827805-74827824 Msa1038050:three_prime_UTR 45.0%
CACTGCTTTCTTACTGGGTT+TGG - chr7_1:74827871-74827890 Msa1038050:CDS 45.0%
!! GCAGGAAGCACTAATCCTAA+CGG - chr7_1:74827982-74828001 Msa1038050:intron 45.0%
CGGTGACTTCAATCCATATG+AGG - chr7_1:74828002-74828021 Msa1038050:intron 45.0%
ATTTGTGACGTCATTGCTGC+TGG - chr7_1:74828529-74828548 Msa1038050:intron 45.0%
! TAGGGTATGTTTGGGTTTGG+AGG - chr7_1:74828623-74828642 Msa1038050:intron 45.0%
! AGGGTATGTTTGGGTTTGGA+GGG - chr7_1:74828624-74828643 Msa1038050:intron 45.0%
GAACTGAAATACTGGGACGT+AGG - chr7_1:74828828-74828847 Msa1038050:intron 45.0%
GCTGAGAAGTGGATAATTGC+AGG + chr7_1:74828860-74828879 None:intergenic 45.0%
GTTATGTGTGGCAGTTGGTT+TGG + chr7_1:74828938-74828957 None:intergenic 45.0%
CCTTAAGGCTATGTTTGGGA+AGG + chr7_1:74829004-74829023 None:intergenic 45.0%
! CCTTCCCAAACATAGCCTTA+AGG - chr7_1:74829001-74829020 Msa1038050:intron 45.0%
!! GTCACTTGGTTTGGTCTAGA+GGG + chr7_1:74829057-74829076 None:intergenic 45.0%
!! AGTCACTTGGTTTGGTCTAG+AGG + chr7_1:74829058-74829077 None:intergenic 45.0%
! TGGTTTGGAGTCACTTGGTT+TGG + chr7_1:74829066-74829085 None:intergenic 45.0%
!! TCACTTGGTTTGGAGTCACT+TGG + chr7_1:74829071-74829090 None:intergenic 45.0%
!! TGTCATATGCCTTTTCGAGC+TGG + chr7_1:74829228-74829247 None:intergenic 45.0%
!! CGGAAAAAGGGTGTGACTTT+TGG - chr7_1:74829274-74829293 Msa1038050:intron 45.0%
CTTGGTCCCCAAGGTATAAT+TGG + chr7_1:74829872-74829891 None:intergenic 45.0%
CAATTATACCTTGGGGACCA+AGG - chr7_1:74829870-74829889 Msa1038050:intron 45.0%
ATAACAAACCTTGGTCCCCA+AGG + chr7_1:74829881-74829900 None:intergenic 45.0%
TTGTCTTTCTGCAGACAGCT+TGG - chr7_1:74830365-74830384 Msa1038050:intron 45.0%
! GGAGCTTTTCGGAGATTCAA+AGG + chr7_1:74830476-74830495 None:intergenic 45.0%
GATTACAGAGGCCCATAAAC+TGG + chr7_1:74830777-74830796 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr7_1:74831057-74831076 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr7_1:74831057-74831076 Msa1038050:intron 45.0%
TGGGATTGTAGGACCAAACT+TGG - chr7_1:74831551-74831570 Msa1038050:intron 45.0%
TAATCCTCGTTGTCCTATGC+GGG - chr7_1:74832069-74832088 Msa1038050:intron 45.0%
GCTATAACACTGTAGCGTAG+TGG - chr7_1:74832339-74832358 Msa1038050:intron 45.0%
AAAGCACAGGCACTAACTAC+AGG - chr7_1:74832472-74832491 Msa1038050:intron 45.0%
TAGCAACTGTGCCATCAAAC+TGG + chr7_1:74832849-74832868 None:intergenic 45.0%
ATGGCACAGTTGCTAACTCT+TGG - chr7_1:74832854-74832873 Msa1038050:CDS 45.0%
AAGCATGAATGCCGATGATG+CGG + chr7_1:74833080-74833099 None:intergenic 45.0%
GGAAAAGGAACACAGTACTG+CGG + chr7_1:74833174-74833193 None:intergenic 45.0%
!!! TTGATTTTATTTAATTATTT+TGG - chr7_1:74830323-74830342 Msa1038050:CDS 5.0%
GAGTGAGTGTTACCTGAGAG+AGG + chr7_1:74827820-74827839 None:intergenic 50.0%
TTGGAAGAAGAAGGAGGAGG+AGG + chr7_1:74827846-74827865 None:intergenic 50.0%
TCTTCTTCTGCATCTGCTGC+AGG - chr7_1:74827964-74827983 Msa1038050:intron 50.0%
!! TGTGTGGCAGTTGGTTTGGA+GGG + chr7_1:74828934-74828953 None:intergenic 50.0%
!! ATGTGTGGCAGTTGGTTTGG+AGG + chr7_1:74828935-74828954 None:intergenic 50.0%
CAGGAAGATGGTGAAGATCC+AGG - chr7_1:74830620-74830639 Msa1038050:intron 50.0%
GATGGTGAAGATCCAGGAGA+AGG - chr7_1:74830626-74830645 Msa1038050:intron 50.0%
GTATGGGAAAGAGACTGCTC+CGG - chr7_1:74830654-74830673 Msa1038050:intron 50.0%
ACGGAGGGAGTAGATTACAG+AGG + chr7_1:74830789-74830808 None:intergenic 50.0%
TACTGTGCTGGACTTCCACT+GGG - chr7_1:74831532-74831551 Msa1038050:intron 50.0%
TGGACTTCCACTGGGATTGT+AGG - chr7_1:74831540-74831559 Msa1038050:intron 50.0%
GTTTGGTCCTACAATCCCAG+TGG + chr7_1:74831550-74831569 None:intergenic 50.0%
AATCCTCGTTGTCCTATGCG+GGG - chr7_1:74832070-74832089 Msa1038050:intron 50.0%
ATCTCAACTCTTCCCCGCAT+AGG + chr7_1:74832085-74832104 None:intergenic 50.0%
GCGGTCATCACTAACTTGAC+TGG + chr7_1:74833155-74833174 None:intergenic 50.0%
!! TGTGGCAGTTGGTTTGGAGG+GGG + chr7_1:74828932-74828951 None:intergenic 55.0%
!! GTGTGGCAGTTGGTTTGGAG+GGG + chr7_1:74828933-74828952 None:intergenic 55.0%
TCCAGGAGAAGGACTGCGTA+TGG - chr7_1:74830637-74830656 Msa1038050:intron 55.0%
CCAGGAGAAGGACTGCGTAT+GGG - chr7_1:74830638-74830657 Msa1038050:intron 55.0%
CAAAAACCAAGGCCAGCGAC+CGG + chr7_1:74830676-74830695 None:intergenic 55.0%
GTACTGTGCTGGACTTCCAC+TGG - chr7_1:74831531-74831550 Msa1038050:intron 55.0%
!! CAGTTGGTTTGGAGGGGGGA+GGG + chr7_1:74828927-74828946 None:intergenic 60.0%
!! GTGGCAGTTGGTTTGGAGGG+GGG + chr7_1:74828931-74828950 None:intergenic 60.0%
CCCATACGCAGTCCTTCTCC+TGG + chr7_1:74830641-74830660 None:intergenic 60.0%
AAAGAGACTGCTCCGGTCGC+TGG - chr7_1:74830661-74830680 Msa1038050:intron 60.0%
!!! CGGTCGCTGGCCTTGGTTTT+TGG - chr7_1:74830674-74830693 Msa1038050:intron 60.0%
CTTCCCCGCATAGGACAACG+AGG + chr7_1:74832076-74832095 None:intergenic 60.0%
!! GCAGTTGGTTTGGAGGGGGG+AGG + chr7_1:74828928-74828947 None:intergenic 65.0%
GGTTTGGAGGGGGGAGGGAG+CGG + chr7_1:74828922-74828941 None:intergenic 70.0%
! ACTGCTCCGGTCGCTGGCCT+TGG - chr7_1:74830667-74830686 Msa1038050:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 74827608 74833380 74827608 ID=Msa1038050;Name=Msa1038050
chr7_1 mRNA 74827608 74833380 74827608 ID=Msa1038050-mRNA-1;Parent=Msa1038050;Name=Msa1038050-mRNA-1;_AED=0.05;_eAED=0.05;_QI=112|1|1|1|1|1|10|254|292
chr7_1 exon 74827608 74827924 74827608 ID=Msa1038050-mRNA-1:exon:18941;Parent=Msa1038050-mRNA-1
chr7_1 exon 74829076 74829147 74829076 ID=Msa1038050-mRNA-1:exon:18940;Parent=Msa1038050-mRNA-1
chr7_1 exon 74830270 74830365 74830270 ID=Msa1038050-mRNA-1:exon:18939;Parent=Msa1038050-mRNA-1
chr7_1 exon 74830484 74830609 74830484 ID=Msa1038050-mRNA-1:exon:18938;Parent=Msa1038050-mRNA-1
chr7_1 exon 74830685 74830742 74830685 ID=Msa1038050-mRNA-1:exon:18937;Parent=Msa1038050-mRNA-1
chr7_1 exon 74831097 74831152 74831097 ID=Msa1038050-mRNA-1:exon:18936;Parent=Msa1038050-mRNA-1
chr7_1 exon 74831682 74831759 74831682 ID=Msa1038050-mRNA-1:exon:18935;Parent=Msa1038050-mRNA-1
chr7_1 exon 74832769 74832873 74832769 ID=Msa1038050-mRNA-1:exon:18934;Parent=Msa1038050-mRNA-1
chr7_1 exon 74832965 74833082 74832965 ID=Msa1038050-mRNA-1:exon:18933;Parent=Msa1038050-mRNA-1
chr7_1 exon 74833162 74833380 74833162 ID=Msa1038050-mRNA-1:exon:18932;Parent=Msa1038050-mRNA-1
chr7_1 five_prime_UTR 74833269 74833380 74833269 ID=Msa1038050-mRNA-1:five_prime_utr;Parent=Msa1038050-mRNA-1
chr7_1 CDS 74833162 74833268 74833162 ID=Msa1038050-mRNA-1:cds;Parent=Msa1038050-mRNA-1
chr7_1 CDS 74832965 74833082 74832965 ID=Msa1038050-mRNA-1:cds;Parent=Msa1038050-mRNA-1
chr7_1 CDS 74832769 74832873 74832769 ID=Msa1038050-mRNA-1:cds;Parent=Msa1038050-mRNA-1
chr7_1 CDS 74831682 74831759 74831682 ID=Msa1038050-mRNA-1:cds;Parent=Msa1038050-mRNA-1
chr7_1 CDS 74831097 74831152 74831097 ID=Msa1038050-mRNA-1:cds;Parent=Msa1038050-mRNA-1
chr7_1 CDS 74830685 74830742 74830685 ID=Msa1038050-mRNA-1:cds;Parent=Msa1038050-mRNA-1
chr7_1 CDS 74830484 74830609 74830484 ID=Msa1038050-mRNA-1:cds;Parent=Msa1038050-mRNA-1
chr7_1 CDS 74830270 74830365 74830270 ID=Msa1038050-mRNA-1:cds;Parent=Msa1038050-mRNA-1
chr7_1 CDS 74829076 74829147 74829076 ID=Msa1038050-mRNA-1:cds;Parent=Msa1038050-mRNA-1
chr7_1 CDS 74827862 74827924 74827862 ID=Msa1038050-mRNA-1:cds;Parent=Msa1038050-mRNA-1
chr7_1 three_prime_UTR 74827608 74827861 74827608 ID=Msa1038050-mRNA-1:three_prime_utr;Parent=Msa1038050-mRNA-1
Gene Sequence

>Msa1038050

ATGGCTTTGACAATCTCAAACATACTTCACTTCCCTAAATTCAACAACAACAACAACAACACTAATTCATCCAACTATTTCCGTTCCCAATTTTCAACCTCTCTCAGGTTTCCCAAGAAAACATCATGGAATAACCCAATAATCATCTCTGCTTCTTCTTCTTCTTCTTCTTCTGCATCTGCTGCAGGAAGCACTAATCCTAACGGTGACTTCAATCCATATGAGATTTTAGGTGTAAGCCCTATTGAGAAATTTGACACGATCAAAGCAGCATATACTAAGAAAAAGAAGGAAGCTGAGATTAAGGGTGATGAACAAACTGCTTCCAGACTCGAAAAGGCATATGACAAAGTTATGATGGCTCAGTTGAGTAATCGGAAAAAGGGTGTGACTTTTGGATCATTTAAGGTTTCAAAGGACATAAAGTATGCTGACAAACAGCCAATTATACCTTGGGGACCAAGGTTTGCTAAATCAAGTGAAAATGATGTGCGCATCAACTTGGCAATATCTGCTGTTTTTACAGCTTGGATCGCAGTAACTCAAAGTGCTGAATATAAACCTTTGCAGTTTTTAGCCTTTGCTTTCGTTTATAGGCTTTTTGAGAAGTTAAAATCCTTTGAATCTCCGAAAAGCTCCACAATTAATGAAGATGGTGAAGATCCAGGAGAAGGACTGCGTATGGGAAAGAGACTGCTCCGGTCGCTGGCCTTGGTTTTTGGATGTATAGCTGTTTCATCCTTGGCTTACACTTTCGCTTTGAACATAGTTGAGTCTGCAAGTGGTTATATCCCATCTCTTCTTTACAACAGTCAGGAGTTGATAATCACCGCATCATCGGCATTCATGCTTTTTATTTTGGGATCTTTTTATAGATAA

Protein sequence

>Msa1038050

MALTISNILHFPKFNNNNNNTNSSNYFRSQFSTSLRFPKKTSWNNPIIISASSSSSSSASAAGSTNPNGDFNPYEILGVSPIEKFDTIKAAYTKKKKEAEIKGDEQTASRLEKAYDKVMMAQLSNRKKGVTFGSFKVSKDIKYADKQPIIPWGPRFAKSSENDVRINLAISAVFTAWIAVTQSAEYKPLQFLAFAFVYRLFEKLKSFESPKSSTINEDGEDPGEGLRMGKRLLRSLALVFGCIAVSSLAYTFALNIVESASGYIPSLLYNSQELIITASSAFMLFILGSFYR*