Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116690 | XP_024638446.1 | 96.066 | 305 | 12 | 0 | 1 | 305 | 1 | 305 | 0.0 | 576 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116690 | A0A072UP09 | 96.066 | 305 | 12 | 0 | 1 | 305 | 1 | 305 | 0.0 | 576 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006390 | Msa1116690 | 0.805642 | 1.209697e-49 | -8.615850e-47 |
| Msa0011720 | Msa1116690 | 0.821327 | 4.282823e-53 | -8.615850e-47 |
| Msa0014800 | Msa1116690 | 0.831447 | 1.661123e-55 | -8.615850e-47 |
| Msa0050730 | Msa1116690 | 0.843679 | 1.208409e-58 | -8.615850e-47 |
| Msa0050760 | Msa1116690 | 0.849706 | 2.722985e-60 | -8.615850e-47 |
| Msa0053900 | Msa1116690 | 0.807978 | 3.880328e-50 | -8.615850e-47 |
| Msa0057520 | Msa1116690 | 0.805142 | 1.539445e-49 | -8.615850e-47 |
| Msa0060600 | Msa1116690 | 0.815823 | 7.589359e-52 | -8.615850e-47 |
| Msa0072000 | Msa1116690 | 0.822972 | 1.779367e-53 | -8.615850e-47 |
| Msa0078750 | Msa1116690 | 0.800217 | 1.598235e-48 | -8.615850e-47 |
| Msa0092990 | Msa1116690 | 0.815457 | 9.155883e-52 | -8.615850e-47 |
| Msa0095380 | Msa1116690 | 0.811115 | 8.226489e-51 | -8.615850e-47 |
| Msa0096450 | Msa1116690 | 0.812859 | 3.430080e-51 | -8.615850e-47 |
| Msa0105340 | Msa1116690 | 0.819220 | 1.302003e-52 | -8.615850e-47 |
| Msa0105700 | Msa1116690 | 0.809051 | 2.289937e-50 | -8.615850e-47 |
| Msa0108560 | Msa1116690 | 0.835675 | 1.461652e-56 | -8.615850e-47 |
| Msa0120340 | Msa1116690 | 0.819117 | 1.374668e-52 | -8.615850e-47 |
| Msa0609630 | Msa1116690 | 0.852455 | 4.566260e-61 | -8.615850e-47 |
| Msa0610590 | Msa1116690 | 0.841729 | 3.982199e-58 | -8.615850e-47 |
| Msa0622340 | Msa1116690 | 0.820354 | 7.171764e-53 | -8.615850e-47 |
| Msa0630960 | Msa1116690 | 0.819131 | 1.364047e-52 | -8.615850e-47 |
| Msa0631980 | Msa1116690 | 0.801408 | 9.134128e-49 | -8.615850e-47 |
| Msa0631990 | Msa1116690 | 0.838790 | 2.333240e-57 | -8.615850e-47 |
| Msa0635380 | Msa1116690 | 0.812847 | 3.449814e-51 | -8.615850e-47 |
| Msa0647450 | Msa1116690 | -0.800704 | 1.272311e-48 | -8.615850e-47 |
| Msa0650190 | Msa1116690 | 0.838648 | 2.537561e-57 | -8.615850e-47 |
| Msa0651190 | Msa1116690 | 0.833558 | 4.978475e-56 | -8.615850e-47 |
| Msa0653490 | Msa1116690 | 0.810723 | 1.000430e-50 | -8.615850e-47 |
| Msa0660300 | Msa1116690 | 0.826899 | 2.105746e-54 | -8.615850e-47 |
| Msa0662650 | Msa1116690 | 0.819088 | 1.395523e-52 | -8.615850e-47 |
| Msa0669200 | Msa1116690 | 0.832963 | 7.001230e-56 | -8.615850e-47 |
| Msa0669850 | Msa1116690 | 0.810359 | 1.198661e-50 | -8.615850e-47 |
| Msa0670660 | Msa1116690 | 0.840700 | 7.424569e-58 | -8.615850e-47 |
| Msa0692110 | Msa1116690 | 0.902893 | 6.079569e-79 | -8.615850e-47 |
| Msa0694250 | Msa1116690 | 0.817804 | 2.727245e-52 | -8.615850e-47 |
| Msa0697400 | Msa1116690 | 0.809919 | 1.491360e-50 | -8.615850e-47 |
| Msa0708860 | Msa1116690 | 0.817541 | 3.125673e-52 | -8.615850e-47 |
| Msa0711130 | Msa1116690 | 0.818293 | 2.114001e-52 | -8.615850e-47 |
| Msa0714340 | Msa1116690 | 0.805646 | 1.207490e-49 | -8.615850e-47 |
| Msa0731180 | Msa1116690 | 0.812303 | 4.538161e-51 | -8.615850e-47 |
| Msa0734120 | Msa1116690 | 0.806527 | 7.876836e-50 | -8.615850e-47 |
| Msa0743260 | Msa1116690 | 0.813121 | 3.004896e-51 | -8.615850e-47 |
| Msa0751210 | Msa1116690 | 0.810856 | 9.361310e-51 | -8.615850e-47 |
| Msa0756310 | Msa1116690 | 0.823064 | 1.693668e-53 | -8.615850e-47 |
| Msa0757050 | Msa1116690 | 0.802008 | 6.876771e-49 | -8.615850e-47 |
| Msa0767080 | Msa1116690 | 0.824138 | 9.494828e-54 | -8.615850e-47 |
| Msa0771720 | Msa1116690 | 0.803496 | 3.390420e-49 | -8.615850e-47 |
| Msa0775260 | Msa1116690 | 0.846588 | 1.976503e-59 | -8.615850e-47 |
| Msa0785570 | Msa1116690 | 0.825508 | 4.511958e-54 | -8.615850e-47 |
| Msa0791910 | Msa1116690 | 0.838063 | 3.592559e-57 | -8.615850e-47 |
| Msa0792090 | Msa1116690 | 0.829891 | 3.992787e-55 | -8.615850e-47 |
| Msa0794320 | Msa1116690 | 0.834051 | 3.747082e-56 | -8.615850e-47 |
| Msa0794510 | Msa1116690 | -0.811666 | 6.246485e-51 | -8.615850e-47 |
| Msa0794720 | Msa1116690 | 0.815284 | 1.000168e-51 | -8.615850e-47 |
| Msa0798370 | Msa1116690 | 0.812138 | 4.930505e-51 | -8.615850e-47 |
| Msa0835730 | Msa1116690 | 0.853639 | 2.092794e-61 | -8.615850e-47 |
| Msa0143080 | Msa1116690 | 0.832797 | 7.699104e-56 | -8.615850e-47 |
| Msa0148360 | Msa1116690 | 0.811144 | 8.108960e-51 | -8.615850e-47 |
| Msa0151690 | Msa1116690 | 0.816542 | 5.241565e-52 | -8.615850e-47 |
| Msa0152170 | Msa1116690 | 0.820207 | 7.746617e-53 | -8.615850e-47 |
| Msa0187060 | Msa1116690 | 0.814275 | 1.673500e-51 | -8.615850e-47 |
| Msa0191440 | Msa1116690 | 0.815438 | 9.244929e-52 | -8.615850e-47 |
| Msa0220440 | Msa1116690 | 0.827386 | 1.610133e-54 | -8.615850e-47 |
| Msa0223380 | Msa1116690 | 0.800076 | 1.707373e-48 | -8.615850e-47 |
| Msa0236980 | Msa1116690 | 0.841122 | 5.753076e-58 | -8.615850e-47 |
| Msa0365490 | Msa1116690 | 0.826578 | 2.512002e-54 | -8.615850e-47 |
| Msa0376590 | Msa1116690 | 0.806186 | 9.294859e-50 | -8.615850e-47 |
| Msa0379640 | Msa1116690 | 0.800419 | 1.454179e-48 | -8.615850e-47 |
| Msa0380040 | Msa1116690 | 0.808264 | 3.373229e-50 | -8.615850e-47 |
| Msa0389810 | Msa1116690 | 0.822349 | 2.484623e-53 | -8.615850e-47 |
| Msa0392710 | Msa1116690 | 0.828035 | 1.124503e-54 | -8.615850e-47 |
| Msa0394340 | Msa1116690 | 0.801196 | 1.009213e-48 | -8.615850e-47 |
| Msa0426330 | Msa1116690 | 0.817730 | 2.833769e-52 | -8.615850e-47 |
| Msa0433530 | Msa1116690 | 0.814793 | 1.285552e-51 | -8.615850e-47 |
| Msa0449760 | Msa1116690 | 0.838567 | 2.664149e-57 | -8.615850e-47 |
| Msa0449830 | Msa1116690 | 0.843136 | 1.687257e-58 | -8.615850e-47 |
| Msa0458440 | Msa1116690 | 0.848865 | 4.666221e-60 | -8.615850e-47 |
| Msa0464900 | Msa1116690 | 0.806579 | 7.681665e-50 | -8.615850e-47 |
| Msa0468130 | Msa1116690 | 0.824301 | 8.693352e-54 | -8.615850e-47 |
| Msa0473240 | Msa1116690 | 0.806054 | 9.912085e-50 | -8.615850e-47 |
| Msa0475410 | Msa1116690 | 0.801855 | 7.392683e-49 | -8.615850e-47 |
| Msa0477260 | Msa1116690 | 0.809714 | 1.650979e-50 | -8.615850e-47 |
| Msa0482190 | Msa1116690 | -0.806360 | 8.544294e-50 | -8.615850e-47 |
| Msa0982240 | Msa1116690 | 0.803201 | 3.903012e-49 | -8.615850e-47 |
| Msa0982270 | Msa1116690 | 0.822561 | 2.218391e-53 | -8.615850e-47 |
| Msa0992490 | Msa1116690 | -0.815811 | 7.636037e-52 | -8.615850e-47 |
| Msa0993530 | Msa1116690 | 0.815560 | 8.683871e-52 | -8.615850e-47 |
| Msa0996080 | Msa1116690 | 0.814177 | 1.759228e-51 | -8.615850e-47 |
| Msa0999040 | Msa1116690 | 0.824938 | 6.152916e-54 | -8.615850e-47 |
| Msa1005410 | Msa1116690 | 0.807389 | 5.177692e-50 | -8.615850e-47 |
| Msa1015060 | Msa1116690 | 0.832465 | 9.310951e-56 | -8.615850e-47 |
| Msa1019840 | Msa1116690 | -0.806115 | 9.619227e-50 | -8.615850e-47 |
| Msa1026760 | Msa1116690 | 0.819350 | 1.216430e-52 | -8.615850e-47 |
| Msa1026790 | Msa1116690 | 0.815918 | 7.227507e-52 | -8.615850e-47 |
| Msa1039880 | Msa1116690 | 0.810546 | 1.092277e-50 | -8.615850e-47 |
| Msa1056640 | Msa1116690 | 0.817061 | 4.007964e-52 | -8.615850e-47 |
| Msa1060220 | Msa1116690 | 0.833919 | 4.043875e-56 | -8.615850e-47 |
| Msa1068200 | Msa1116690 | -0.800289 | 1.545367e-48 | -8.615850e-47 |
| Msa1072460 | Msa1116690 | -0.800084 | 1.701344e-48 | -8.615850e-47 |
| Msa1075220 | Msa1116690 | -0.807948 | 3.938791e-50 | -8.615850e-47 |
| Msa1087470 | Msa1116690 | 0.843729 | 1.171341e-58 | -8.615850e-47 |
| Msa1090260 | Msa1116690 | 0.813526 | 2.447646e-51 | -8.615850e-47 |
| Msa1092090 | Msa1116690 | 0.821835 | 3.269294e-53 | -8.615850e-47 |
| Msa1092820 | Msa1116690 | 0.824694 | 7.026790e-54 | -8.615850e-47 |
| Msa0243690 | Msa1116690 | 0.805013 | 1.638274e-49 | -8.615850e-47 |
| Msa0269280 | Msa1116690 | 0.824210 | 9.130381e-54 | -8.615850e-47 |
| Msa0269450 | Msa1116690 | 0.822675 | 2.086819e-53 | -8.615850e-47 |
| Msa0277530 | Msa1116690 | 0.829040 | 6.429207e-55 | -8.615850e-47 |
| Msa0281360 | Msa1116690 | 0.807118 | 5.908953e-50 | -8.615850e-47 |
| Msa0282250 | Msa1116690 | 0.807832 | 4.168748e-50 | -8.615850e-47 |
| Msa0296760 | Msa1116690 | 0.809797 | 1.584193e-50 | -8.615850e-47 |
| Msa0309550 | Msa1116690 | 0.805793 | 1.124688e-49 | -8.615850e-47 |
| Msa0311700 | Msa1116690 | 0.810550 | 1.090226e-50 | -8.615850e-47 |
| Msa0315290 | Msa1116690 | 0.832943 | 7.082765e-56 | -8.615850e-47 |
| Msa0323080 | Msa1116690 | 0.800390 | 1.474331e-48 | -8.615850e-47 |
| Msa0328210 | Msa1116690 | 0.830315 | 3.147428e-55 | -8.615850e-47 |
| Msa0335040 | Msa1116690 | 0.808188 | 3.500886e-50 | -8.615850e-47 |
| Msa0342100 | Msa1116690 | 0.803766 | 2.980336e-49 | -8.615850e-47 |
| Msa0356960 | Msa1116690 | 0.829763 | 4.291955e-55 | -8.615850e-47 |
| Msa1109570 | Msa1116690 | 0.806513 | 7.930027e-50 | -8.615850e-47 |
| Msa1116690 | Msa1131940 | -0.826233 | 3.035956e-54 | -8.615850e-47 |
| Msa1116690 | Msa1162550 | -0.804677 | 1.925795e-49 | -8.615850e-47 |
| Msa1116690 | Msa1172230 | 0.816757 | 4.691237e-52 | -8.615850e-47 |
| Msa1116690 | Msa1172670 | 0.805381 | 1.371821e-49 | -8.615850e-47 |
| Msa1116690 | Msa1174310 | 0.807837 | 4.158479e-50 | -8.615850e-47 |
| Msa1116690 | Msa1175330 | 0.854520 | 1.165491e-61 | -8.615850e-47 |
| Msa1116690 | Msa1206020 | 0.801735 | 7.825325e-49 | -8.615850e-47 |
| Msa1116690 | Msa1207380 | 0.805280 | 1.440933e-49 | -8.615850e-47 |
| Msa1116690 | Msa1217810 | 0.835493 | 1.624834e-56 | -8.615850e-47 |
| Msa1116690 | Msa1217830 | 0.804133 | 2.500330e-49 | -8.615850e-47 |
| Msa1116690 | Msa1218650 | 0.822723 | 2.033987e-53 | -8.615850e-47 |
| Msa1116690 | Msa1219430 | 0.837213 | 5.936234e-57 | -8.615850e-47 |
| Msa1116690 | Msa1233500 | 0.803097 | 4.100964e-49 | -8.615850e-47 |
| Msa1116690 | Msa1235630 | 0.853443 | 2.381809e-61 | -8.615850e-47 |
| Msa1116690 | Msa1237030 | 0.815708 | 8.050683e-52 | -8.615850e-47 |
| Msa1116690 | Msa1252070 | 0.811658 | 6.272029e-51 | -8.615850e-47 |
| Msa1116690 | Msa1258380 | -0.804079 | 2.566044e-49 | -8.615850e-47 |
| Msa1116690 | Msa1267260 | 0.847960 | 8.308865e-60 | -8.615850e-47 |
| Msa1116690 | Msa1267840 | 0.806287 | 8.852583e-50 | -8.615850e-47 |
| Msa1116690 | Msa1276440 | 0.804105 | 2.534590e-49 | -8.615850e-47 |
| Msa1116690 | Msa1277280 | 0.846670 | 1.877315e-59 | -8.615850e-47 |
| Msa1116690 | Msa1280130 | 0.829326 | 5.479779e-55 | -8.615850e-47 |
| Msa1116690 | Msa1289010 | 0.806806 | 6.877482e-50 | -8.615850e-47 |
| Msa1116690 | Msa1292730 | 0.805502 | 1.294221e-49 | -8.615850e-47 |
| Msa1116690 | Msa1295630 | 0.802365 | 5.808429e-49 | -8.615850e-47 |
| Msa1116690 | Msa1300350 | -0.817395 | 3.371732e-52 | -8.615850e-47 |
| Msa1116690 | Msa1306750 | 0.840612 | 7.830008e-58 | -8.615850e-47 |
| Msa1116690 | Msa1307740 | 0.821347 | 4.238146e-53 | -8.615850e-47 |
| Msa1116690 | Msa1314770 | 0.801074 | 1.068978e-48 | -8.615850e-47 |
| Msa1116690 | Msa1315870 | 0.831161 | 1.953162e-55 | -8.615850e-47 |
| Msa1116690 | Msa1316560 | -0.816651 | 4.955241e-52 | -8.615850e-47 |
| Msa1116690 | Msa1327760 | 0.802924 | 4.453396e-49 | -8.615850e-47 |
| Msa1116690 | Msa1328850 | 0.805651 | 1.204324e-49 | -8.615850e-47 |
| Msa1116690 | Msa1340020 | 0.805869 | 1.084078e-49 | -8.615850e-47 |
| Msa1116690 | Msa1340650 | 0.804443 | 2.155129e-49 | -8.615850e-47 |
| Msa1116690 | Msa1348600 | 0.821750 | 3.419352e-53 | -8.615850e-47 |
| Msa1116690 | Msa1362510 | 0.806174 | 9.351700e-50 | -8.615850e-47 |
| Msa1116690 | Msa1372580 | 0.820884 | 5.417994e-53 | -8.615850e-47 |
| Msa1116690 | Msa1382410 | 0.829538 | 4.868180e-55 | -8.615850e-47 |
| Msa1116690 | Msa1386430 | 0.834389 | 3.083388e-56 | -8.615850e-47 |
| Msa1116690 | Msa1393040 | 0.805695 | 1.179157e-49 | -8.615850e-47 |
| Msa1116690 | Msa1393740 | 0.816163 | 6.370114e-52 | -8.615850e-47 |
| Msa1116690 | Msa1396830 | 0.815469 | 9.099656e-52 | -8.615850e-47 |
| Msa1116690 | Msa1408790 | 0.842674 | 2.238997e-58 | -8.615850e-47 |
| Msa1116690 | Msa1419110 | 0.824345 | 8.489400e-54 | -8.615850e-47 |
| Msa1116690 | Msa1425010 | 0.802126 | 6.503426e-49 | -8.615850e-47 |
| Msa1116690 | Msa1432640 | 0.803488 | 3.403666e-49 | -8.615850e-47 |
| Msa1116690 | Msa1436040 | 0.839064 | 1.981059e-57 | -8.615850e-47 |
| Msa1116690 | Msa1439230 | 0.819719 | 1.002067e-52 | -8.615850e-47 |
| Msa1116690 | Msa1440600 | 0.849260 | 3.624272e-60 | -8.615850e-47 |
| Msa1116690 | Msa1441190 | 0.845703 | 3.442704e-59 | -8.615850e-47 |
| Msa1116690 | Msa1444250 | -0.809497 | 1.837727e-50 | -8.615850e-47 |
| Msa1116690 | Msa1444450 | 0.805687 | 1.183473e-49 | -8.615850e-47 |
| Msa1116690 | Msa1445030 | 0.807628 | 4.606356e-50 | -8.615850e-47 |
| Msa1116690 | Msa1447150 | 0.803484 | 3.409612e-49 | -8.615850e-47 |
| Msa1116690 | Msa1451620 | -0.809449 | 1.881720e-50 | -8.615850e-47 |
| Msa1116690 | Msa1459950 | 0.800551 | 1.366694e-48 | -8.615850e-47 |
| Msa1116690 | Msa1466730 | 0.814150 | 1.784087e-51 | -8.615850e-47 |
| Msa0485500 | Msa1116690 | -0.803761 | 2.986906e-49 | -8.615850e-47 |
| Msa0505060 | Msa1116690 | 0.804441 | 2.157223e-49 | -8.615850e-47 |
| Msa0534410 | Msa1116690 | 0.806904 | 6.556842e-50 | -8.615850e-47 |
| Msa0535030 | Msa1116690 | 0.806891 | 6.600463e-50 | -8.615850e-47 |
| Msa0535060 | Msa1116690 | 0.808841 | 2.540284e-50 | -8.615850e-47 |
| Msa0553220 | Msa1116690 | -0.800225 | 1.592587e-48 | -8.615850e-47 |
| Msa0578970 | Msa1116690 | 0.840099 | 1.065961e-57 | -8.615850e-47 |
| Msa0585980 | Msa1116690 | 0.804972 | 1.671254e-49 | -8.615850e-47 |
| Msa0590660 | Msa1116690 | 0.811854 | 5.684875e-51 | -8.615850e-47 |
| Msa0591060 | Msa1116690 | 0.814777 | 1.296020e-51 | -8.615850e-47 |
| Msa0591540 | Msa1116690 | 0.801850 | 7.412931e-49 | -8.615850e-47 |
| Msa0591770 | Msa1116690 | 0.807095 | 5.976633e-50 | -8.615850e-47 |
| Msa0598460 | Msa1116690 | 0.803177 | 3.947548e-49 | -8.615850e-47 |
| Msa0844900 | Msa1116690 | 0.805409 | 1.353620e-49 | -8.615850e-47 |
| Msa0845000 | Msa1116690 | 0.836717 | 7.945383e-57 | -8.615850e-47 |
| Msa0846810 | Msa1116690 | 0.826834 | 2.182231e-54 | -8.615850e-47 |
| Msa0853170 | Msa1116690 | 0.852781 | 3.685512e-61 | -8.615850e-47 |
| Msa0877410 | Msa1116690 | 0.826722 | 2.320677e-54 | -8.615850e-47 |
| Msa0882510 | Msa1116690 | 0.807638 | 4.583361e-50 | -8.615850e-47 |
| Msa0891600 | Msa1116690 | -0.809950 | 1.468266e-50 | -8.615850e-47 |
| Msa0893810 | Msa1116690 | 0.820885 | 5.415445e-53 | -8.615850e-47 |
| Msa0896220 | Msa1116690 | 0.832121 | 1.132504e-55 | -8.615850e-47 |
| Msa0899230 | Msa1116690 | 0.812998 | 3.196972e-51 | -8.615850e-47 |
| Msa0908170 | Msa1116690 | 0.830071 | 3.610704e-55 | -8.615850e-47 |
| Msa0910980 | Msa1116690 | -0.831228 | 1.880371e-55 | -8.615850e-47 |
| Msa0927670 | Msa1116690 | 0.853084 | 3.018743e-61 | -8.615850e-47 |
| Msa0959010 | Msa1116690 | 0.820537 | 6.507833e-53 | -8.615850e-47 |
| Msa0960160 | Msa1116690 | 0.844935 | 5.555875e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116690 | MtrunA17_Chr4g0042191 | 96.066 | 305 | 12 | 0 | 1 | 305 | 1 | 305 | 0.0 | 576 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116690 | AT5G54540.1 | 33.951 | 324 | 168 | 11 | 1 | 305 | 1 | 297 | 5.66e-34 | 126 |
Find 109 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGACAGCATTCCATATATT+TGG | 0.098347 | 7_3:+64469369 | None:intergenic |
| AGGCTTCACGTCCGCGGTTT+TGG | 0.226260 | 7_3:+64470527 | None:intergenic |
| TTTGGTACTGCGGTACTTTA+TGG | 0.268825 | 7_3:-64468481 | Msa1116690:three_prime_UTR |
| TAACTATTCCCAATATTATA+TGG | 0.271397 | 7_3:-64468625 | Msa1116690:three_prime_UTR |
| GCGTCGCTAGGTCAGGATTC+AGG | 0.274969 | 7_3:-64470632 | Msa1116690:CDS |
| GCCTCTGCACACGTCGGTTT+CGG | 0.293742 | 7_3:-64470508 | Msa1116690:CDS |
| TTGCTTGTGACCCAAATATA+TGG | 0.322907 | 7_3:-64469380 | Msa1116690:CDS |
| GCTTCGCTGCAAAGGAAATA+AGG | 0.333500 | 7_3:+64470721 | None:intergenic |
| TTTCTTGAACGCATGACTTT+GGG | 0.352491 | 7_3:-64468591 | Msa1116690:three_prime_UTR |
| GCTAGCAACTGATTGGATAA+TGG | 0.370522 | 7_3:-64470700 | Msa1116690:exon |
| GACGCCGATGCCGGCGAGCT+TGG | 0.375606 | 7_3:+64470650 | None:intergenic |
| TGACAGCATTCCATATATTT+GGG | 0.391615 | 7_3:+64469370 | None:intergenic |
| TGCTGATGGAGGCAGTTTCA+TGG | 0.399854 | 7_3:-64468971 | Msa1116690:CDS |
| TTTCATGGGATTGGCAGTTA+TGG | 0.406291 | 7_3:-64468923 | Msa1116690:CDS |
| TACTTTACCCGTTGATGTAC+GGG | 0.407556 | 7_3:-64468546 | Msa1116690:three_prime_UTR |
| ATTGGCAGTTATGGTGATAA+TGG | 0.408540 | 7_3:-64468914 | Msa1116690:CDS |
| CTAGCAACTGATTGGATAAT+GGG | 0.408637 | 7_3:-64470699 | Msa1116690:exon |
| AGCCTCAACAAGACAATCCT+TGG | 0.412702 | 7_3:+64469644 | None:intergenic |
| TTCTTCGAATCACAGCTTGC+AGG | 0.414030 | 7_3:-64469324 | Msa1116690:intron |
| GCAGCCAAGCTCGCCGGCAT+CGG | 0.414205 | 7_3:-64470654 | Msa1116690:CDS |
| CAGCGAAGCTAGCAACTGAT+TGG | 0.414342 | 7_3:-64470707 | Msa1116690:five_prime_UTR |
| ATTTGTCTTTCTCAACTGTT+GGG | 0.421154 | 7_3:+64469004 | None:intergenic |
| GATTTGTCTTTCTCAACTGT+TGG | 0.425812 | 7_3:+64469003 | None:intergenic |
| TGAGGCTATTTCAAATCCTT+CGG | 0.427999 | 7_3:-64469628 | Msa1116690:CDS |
| ACATTGGCCCGTACATCAAC+GGG | 0.435942 | 7_3:+64468539 | None:intergenic |
| GAAGCTGACAGTTACTGAAA+TGG | 0.440322 | 7_3:-64469061 | Msa1116690:CDS |
| TTTCGGAGGATTTGAATGAC+TGG | 0.442439 | 7_3:-64470491 | Msa1116690:CDS |
| GGGAGGAAGTTTCATGGGAT+TGG | 0.442750 | 7_3:-64468932 | Msa1116690:CDS |
| GGTTCTGTCTCCTTCTCCCA+AGG | 0.446630 | 7_3:-64469661 | Msa1116690:CDS |
| CGTCGCTAGGTCAGGATTCA+GGG | 0.451139 | 7_3:-64470631 | Msa1116690:CDS |
| GCAACTGCAGATTCAACAAA+TGG | 0.455044 | 7_3:-64469189 | Msa1116690:intron |
| GGCATCGGCGTCGCTAGGTC+AGG | 0.459040 | 7_3:-64470639 | Msa1116690:CDS |
| TAGCTCAAGTGTTGAGGCCC+AGG | 0.460395 | 7_3:-64469571 | Msa1116690:intron |
| TCGCCGGCATCGGCGTCGCT+AGG | 0.463408 | 7_3:-64470644 | Msa1116690:CDS |
| ACATTTCCTGACTGAGACTC+AGG | 0.469584 | 7_3:+64469114 | None:intergenic |
| CCTACGCCGAGAATGGTGTT+TGG | 0.473022 | 7_3:-64470426 | Msa1116690:CDS |
| CACATTGGCCCGTACATCAA+CGG | 0.473372 | 7_3:+64468538 | None:intergenic |
| CGAGACCACTGTTTCTCCGC+TGG | 0.479377 | 7_3:+64470591 | None:intergenic |
| ATCTCATGGTAGTGAAGTCT+TGG | 0.480550 | 7_3:-64469682 | Msa1116690:CDS |
| TCCCAAGGATTGTCTTGTTG+AGG | 0.484050 | 7_3:-64469646 | Msa1116690:CDS |
| TCCTCCGCTTCCTTCAACGT+CGG | 0.485697 | 7_3:+64470396 | None:intergenic |
| TATATTTGGGTCACAAGCAA+TGG | 0.494737 | 7_3:+64469383 | None:intergenic |
| GACTTTGGGAAAGTGTGGAT+TGG | 0.497377 | 7_3:-64468577 | Msa1116690:three_prime_UTR |
| ATACTTTACCCGTTGATGTA+CGG | 0.501582 | 7_3:-64468547 | Msa1116690:three_prime_UTR |
| TTCTCAATTTGAGAATTAGC+AGG | 0.502174 | 7_3:+64469708 | None:intergenic |
| CACAGTGAAAATGTTCAGAT+TGG | 0.502268 | 7_3:+64468504 | None:intergenic |
| TGTCGTGGGAGGAAGTTTCA+TGG | 0.507727 | 7_3:-64468938 | Msa1116690:CDS |
| TGGAGAGCCTACGCCGAGAA+TGG | 0.509702 | 7_3:-64470433 | Msa1116690:CDS |
| CAGCGGAGAAACAGTGGTCT+CGG | 0.510466 | 7_3:-64470590 | Msa1116690:CDS |
| ACCTCTCCAAACACCATTCT+CGG | 0.512931 | 7_3:+64470420 | None:intergenic |
| AAATCTTCAGCTGATGCTGA+TGG | 0.518948 | 7_3:-64468985 | Msa1116690:CDS |
| AAGCAACTGAAAAGCGTGAA+TGG | 0.519901 | 7_3:+64469593 | None:intergenic |
| AGAGAGCCTAAACACTCATT+AGG | 0.522726 | 7_3:-64468879 | Msa1116690:exon |
| GAAAAGCCTGAGTCTCAGTC+AGG | 0.524090 | 7_3:-64469120 | Msa1116690:CDS |
| CATAAACAAATCACTTTCAT+CGG | 0.525463 | 7_3:+64470461 | None:intergenic |
| AGTTGCTAGCTTCGCTGCAA+AGG | 0.529630 | 7_3:+64470713 | None:intergenic |
| TGACCTAGCGACGCCGATGC+CGG | 0.531128 | 7_3:+64470641 | None:intergenic |
| TTCGGAGGATTTGAATGACT+GGG | 0.534180 | 7_3:-64470490 | Msa1116690:CDS |
| GTTGCTTAGCTCAAGTGTTG+AGG | 0.535470 | 7_3:-64469577 | Msa1116690:CDS |
| CCCTCGTCGGCGATGAGGCG+CGG | 0.537738 | 7_3:+64470565 | None:intergenic |
| AGGACGGCAGCCAAGCTCGC+CGG | 0.539761 | 7_3:-64470660 | Msa1116690:CDS |
| GATTGGATAATGGGCGGTGG+CGG | 0.542192 | 7_3:-64470690 | Msa1116690:exon |
| GCCTCAACAAGACAATCCTT+GGG | 0.548704 | 7_3:+64469645 | None:intergenic |
| AAAGCGTGAATGGCATGCTT+AGG | 0.550944 | 7_3:+64469603 | None:intergenic |
| AGTGATTTGTTTATGTCGAG+TGG | 0.551557 | 7_3:-64470453 | Msa1116690:CDS |
| GGTTCCGACGTTGAAGGAAG+CGG | 0.551831 | 7_3:-64470400 | Msa1116690:CDS |
| TTTGAGAATTAGCAGGTGAA+AGG | 0.552733 | 7_3:+64469715 | None:intergenic |
| GTCGTGGGAGGAAGTTTCAT+GGG | 0.556777 | 7_3:-64468937 | Msa1116690:CDS |
| TCGAAGAAACTAGTCACTGC+AGG | 0.567121 | 7_3:+64469339 | None:intergenic |
| ATGGATTATAAGAATGTCGT+GGG | 0.569424 | 7_3:-64468952 | Msa1116690:CDS |
| CGCATGACTTTGGGAAAGTG+TGG | 0.570229 | 7_3:-64468582 | Msa1116690:three_prime_UTR |
| GAAATGGAGTCTTCATGCAC+AGG | 0.574097 | 7_3:-64468699 | Msa1116690:three_prime_UTR |
| CATGGATTATAAGAATGTCG+TGG | 0.578660 | 7_3:-64468953 | Msa1116690:CDS |
| CAAATTGAGAACTCATCTCA+TGG | 0.582375 | 7_3:-64469696 | Msa1116690:CDS |
| TTTCACTGTGTTTGGTACTG+CGG | 0.584657 | 7_3:-64468491 | Msa1116690:three_prime_UTR |
| TGGAGAGGTTCCGACGTTGA+AGG | 0.586309 | 7_3:-64470406 | Msa1116690:CDS |
| CGGTGGCGGAACGATGAGGA+CGG | 0.587249 | 7_3:-64470676 | Msa1116690:CDS |
| GAAGGAAGCGGAGGAAGCCA+CGG | 0.589709 | 7_3:-64470388 | Msa1116690:CDS |
| ACAAGACAATCCTTGGGAGA+AGG | 0.590276 | 7_3:+64469651 | None:intergenic |
| ACCGCGCCTCATCGCCGACG+AGG | 0.591542 | 7_3:-64470566 | Msa1116690:CDS |
| TCTGCACACGTCGGTTTCGG+AGG | 0.596631 | 7_3:-64470505 | Msa1116690:CDS |
| CGCGTGCTTCAATTCAGCCG+TGG | 0.599375 | 7_3:+64470371 | None:intergenic |
| CCAAACACCATTCTCGGCGT+AGG | 0.600029 | 7_3:+64470426 | None:intergenic |
| CCGCGCCTCATCGCCGACGA+GGG | 0.606141 | 7_3:-64470565 | Msa1116690:CDS |
| GTGCAGAGGCTTCACGTCCG+CGG | 0.607881 | 7_3:+64470521 | None:intergenic |
| TCCGAAACCGACGTGTGCAG+AGG | 0.608510 | 7_3:+64470507 | None:intergenic |
| CGTATCCAGCGGAGAAACAG+TGG | 0.608528 | 7_3:-64470596 | Msa1116690:CDS |
| ACGGGCCAATGTGTTCGTCA+TGG | 0.610661 | 7_3:-64468528 | Msa1116690:three_prime_UTR |
| GCCGAGAATGGTGTTTGGAG+AGG | 0.611441 | 7_3:-64470421 | Msa1116690:CDS |
| TCTTCAGCTGATGCTGATGG+AGG | 0.613380 | 7_3:-64468982 | Msa1116690:CDS |
| GAAAACATAGAAGTTGTGAA+AGG | 0.616403 | 7_3:+64468421 | None:intergenic |
| GTCAGGATTCAGGGGAACCA+CGG | 0.619188 | 7_3:-64470622 | Msa1116690:CDS |
| ACTGATTGGATAATGGGCGG+TGG | 0.623434 | 7_3:-64470693 | Msa1116690:exon |
| CCCTGAGATAAAACCCTCGT+CGG | 0.630010 | 7_3:+64470552 | None:intergenic |
| CGGTACTTTATGGATAATCA+CGG | 0.635819 | 7_3:-64468471 | Msa1116690:three_prime_UTR |
| ATGGCATGCTTAGGCACCGA+AGG | 0.637271 | 7_3:+64469612 | None:intergenic |
| TGGGCGGTGGCGGAACGATG+AGG | 0.643041 | 7_3:-64470680 | Msa1116690:CDS |
| GTCGCTAGGTCAGGATTCAG+GGG | 0.649617 | 7_3:-64470630 | Msa1116690:CDS |
| TTGGTCCATGACGAACACAT+TGG | 0.651624 | 7_3:+64468523 | None:intergenic |
| TCCGACGTTGAAGGAAGCGG+AGG | 0.652735 | 7_3:-64470397 | Msa1116690:CDS |
| TAAAACCCTCGTCGGCGATG+AGG | 0.653238 | 7_3:+64470560 | None:intergenic |
| TGGAGTCTTCATGCACAGGT+CGG | 0.656975 | 7_3:-64468695 | Msa1116690:three_prime_UTR |
| GATTATAAGAATGTCGTGGG+AGG | 0.659415 | 7_3:-64468949 | Msa1116690:CDS |
| ATCTCAGGGGACCAAAACCG+CGG | 0.669256 | 7_3:-64470538 | Msa1116690:CDS |
| GCAACTGATTGGATAATGGG+CGG | 0.691401 | 7_3:-64470696 | Msa1116690:exon |
| AAAACGACAAGAAAGGTCGA+CGG | 0.693646 | 7_3:+64468844 | None:intergenic |
| CTCCGCTGGATACGTAACCG+TGG | 0.694899 | 7_3:+64470605 | None:intergenic |
| CGTGAAGCCTCTGCACACGT+CGG | 0.703926 | 7_3:-64470514 | Msa1116690:CDS |
| AACCACGGTTACGTATCCAG+CGG | 0.727599 | 7_3:-64470607 | Msa1116690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGATTAAGAGAAAAATAA+TGG | - | chr7_3:64468547-64468566 | Msa1116690:three_prime_UTR | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr7_3:64468581-64468600 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr7_3:64468580-64468599 | Msa1116690:three_prime_UTR | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr7_3:64468604-64468623 | Msa1116690:three_prime_UTR | 15.0% |
| !!! | TTGATGTTTAATTTTGATTT+AGG | - | chr7_3:64469203-64469222 | Msa1116690:intron | 15.0% |
| !!! | TATTATTTGTTAGTTTCTTT+TGG | - | chr7_3:64469276-64469295 | Msa1116690:intron | 15.0% |
| !! | ATAAGTAAATATAACTTATC+AGG | + | chr7_3:64469667-64469686 | None:intergenic | 15.0% |
| !!! | GCTATTTATGTATTGTTTTT+CGG | + | chr7_3:64468439-64468458 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr7_3:64468590-64468609 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr7_3:64468667-64468686 | Msa1116690:three_prime_UTR | 20.0% |
| !!! | TTTTGGTTGATAATAGTTTT+AGG | - | chr7_3:64469293-64469312 | Msa1116690:intron | 20.0% |
| !!! | TTTGGTTGATAATAGTTTTA+GGG | - | chr7_3:64469294-64469313 | Msa1116690:intron | 20.0% |
| !! | AGATAAAAACACAAAAAAAG+TGG | + | chr7_3:64470235-64470254 | None:intergenic | 20.0% |
| !!! | AGGAAATGTTTTTGATTTTA+TGG | - | chr7_3:64470389-64470408 | Msa1116690:CDS | 20.0% |
| !!! | GGAAATGTTTTTGATTTTAT+GGG | - | chr7_3:64470390-64470409 | Msa1116690:CDS | 20.0% |
| !!! | GAATATGTTTTGAAAGAAAT+TGG | + | chr7_3:64470466-64470485 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTTGAGTAGAAA+TGG | - | chr7_3:64470774-64470793 | Msa1116690:intron | 20.0% |
| !! | TAACTATTCCCAATATTATA+TGG | - | chr7_3:64470864-64470883 | Msa1116690:intron | 20.0% |
| !! | GTGAAAAACCATATAATATT+GGG | + | chr7_3:64470875-64470894 | None:intergenic | 20.0% |
| !! | AGTGAAAAACCATATAATAT+TGG | + | chr7_3:64470876-64470895 | None:intergenic | 20.0% |
| ! | CATAAACAAATCACTTTCAT+CGG | + | chr7_3:64469031-64469050 | None:intergenic | 25.0% |
| ! | TAACTATTTGTTTATCGTGT+TGG | - | chr7_3:64469436-64469455 | Msa1116690:intron | 25.0% |
| ! | TTTGAATTGTCGATATTATG+TGG | - | chr7_3:64469477-64469496 | Msa1116690:intron | 25.0% |
| ! | TTGAATTGTCGATATTATGT+GGG | - | chr7_3:64469478-64469497 | Msa1116690:intron | 25.0% |
| ! | ATATATATGCTATTCTTGAC+TGG | - | chr7_3:64469521-64469540 | Msa1116690:intron | 25.0% |
| ! | GGTTAATTTCTCAGTAAATT+TGG | - | chr7_3:64469579-64469598 | Msa1116690:CDS | 25.0% |
| ! | AACAAATCAAAATACTCAGA+TGG | + | chr7_3:64469628-64469647 | None:intergenic | 25.0% |
| ! | TACTTATTATGTGTTTATCC+TGG | - | chr7_3:64469680-64469699 | Msa1116690:CDS | 25.0% |
| ! | TCTAATCTAGATACGAAATA+AGG | + | chr7_3:64469951-64469970 | None:intergenic | 25.0% |
| ! | TATCTGAATATGTTTATGCT+TGG | - | chr7_3:64470022-64470041 | Msa1116690:intron | 25.0% |
| ! | ATCTGAATATGTTTATGCTT+GGG | - | chr7_3:64470023-64470042 | Msa1116690:intron | 25.0% |
| !! | GAGTACTTTTTGAATGGTAT+CGG | + | chr7_3:64468472-64468491 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr7_3:64468498-64468517 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr7_3:64468499-64468518 | Msa1116690:three_prime_UTR | 30.0% |
| !! | AAGTGACACTCATTTTGAAA+CGG | - | chr7_3:64468733-64468752 | Msa1116690:three_prime_UTR | 30.0% |
| ATATCGACAATTCAAACTGA+AGG | + | chr7_3:64469473-64469492 | None:intergenic | 30.0% | |
| !!! | TATTCTTGACTGGTTTTGTA+AGG | - | chr7_3:64469531-64469550 | Msa1116690:intron | 30.0% |
| TTATTATGTGTTTATCCTGG+TGG | - | chr7_3:64469683-64469702 | Msa1116690:CDS | 30.0% | |
| TTCTCAATTTGAGAATTAGC+AGG | + | chr7_3:64469784-64469803 | None:intergenic | 30.0% | |
| CGAAATAAGGTATATTACCT+GGG | + | chr7_3:64469938-64469957 | None:intergenic | 30.0% | |
| ACGAAATAAGGTATATTACC+TGG | + | chr7_3:64469939-64469958 | None:intergenic | 30.0% | |
| TGACAGCATTCCATATATTT+GGG | + | chr7_3:64470122-64470141 | None:intergenic | 30.0% | |
| ATGACAGCATTCCATATATT+TGG | + | chr7_3:64470123-64470142 | None:intergenic | 30.0% | |
| CACAAAAAAAGTGGATACAA+AGG | + | chr7_3:64470226-64470245 | None:intergenic | 30.0% | |
| !! | TGTGTTTTTATCTTTTGTGC+TGG | - | chr7_3:64470242-64470261 | Msa1116690:intron | 30.0% |
| ATTTGTCTTTCTCAACTGTT+GGG | + | chr7_3:64470488-64470507 | None:intergenic | 30.0% | |
| ! | ATGGATTATAAGAATGTCGT+GGG | - | chr7_3:64470537-64470556 | Msa1116690:CDS | 30.0% |
| AGCATTAAAAACGACAAGAA+AGG | + | chr7_3:64470655-64470674 | None:intergenic | 30.0% | |
| ! | GTAATACTTTGGAAGTAGTG+TGG | - | chr7_3:64468615-64468634 | Msa1116690:three_prime_UTR | 35.0% |
| !! | GTAGTGTGGAGAGTATTAAT+TGG | - | chr7_3:64468629-64468648 | Msa1116690:three_prime_UTR | 35.0% |
| !! | TGTGGAGAGTATTAATTGGA+GGG | - | chr7_3:64468633-64468652 | Msa1116690:three_prime_UTR | 35.0% |
| CTAGCAACTGATTGGATAAT+GGG | - | chr7_3:64468790-64468809 | Msa1116690:three_prime_UTR | 35.0% | |
| !! | AGTGATTTGTTTATGTCGAG+TGG | - | chr7_3:64469036-64469055 | Msa1116690:CDS | 35.0% |
| ! | CATGTTAATTTTTGCGTGAG+AGG | - | chr7_3:64469375-64469394 | Msa1116690:CDS | 35.0% |
| ! | TTTGTTTATCGTGTTGGTGT+CGG | - | chr7_3:64469442-64469461 | Msa1116690:intron | 35.0% |
| TTGAGTTTGTCTTAGTCCAT+TGG | - | chr7_3:64469554-64469573 | Msa1116690:intron | 35.0% | |
| CTGAGAAATTAACCATCCAA+TGG | + | chr7_3:64469573-64469592 | None:intergenic | 35.0% | |
| !! | TTTATCCTGGTGGATTATCT+TGG | - | chr7_3:64469693-64469712 | Msa1116690:CDS | 35.0% |
| TTTGAGAATTAGCAGGTGAA+AGG | + | chr7_3:64469777-64469796 | None:intergenic | 35.0% | |
| CAAATTGAGAACTCATCTCA+TGG | - | chr7_3:64469793-64469812 | Msa1116690:intron | 35.0% | |
| ! | TGAGGCTATTTCAAATCCTT+CGG | - | chr7_3:64469861-64469880 | Msa1116690:intron | 35.0% |
| TATATTTGGGTCACAAGCAA+TGG | + | chr7_3:64470109-64470128 | None:intergenic | 35.0% | |
| TTGCTTGTGACCCAAATATA+TGG | - | chr7_3:64470109-64470128 | Msa1116690:intron | 35.0% | |
| ! | ATAAGAGACTGGTTGGATAA+TGG | + | chr7_3:64470194-64470213 | None:intergenic | 35.0% |
| AAAAGTGGATACAAAGGACA+TGG | + | chr7_3:64470220-64470239 | None:intergenic | 35.0% | |
| TGTAGAAACTCCTGAAAAAG+AGG | - | chr7_3:64470347-64470366 | Msa1116690:intron | 35.0% | |
| GATTTGTCTTTCTCAACTGT+TGG | + | chr7_3:64470489-64470508 | None:intergenic | 35.0% | |
| ! | CATGGATTATAAGAATGTCG+TGG | - | chr7_3:64470536-64470555 | Msa1116690:CDS | 35.0% |
| ATTGGCAGTTATGGTGATAA+TGG | - | chr7_3:64470575-64470594 | Msa1116690:CDS | 35.0% | |
| ! | GTTTTGCCTAATGAGTGTTT+AGG | + | chr7_3:64470619-64470638 | None:intergenic | 35.0% |
| ! | TTTTCTTGAACGCATGACTT+TGG | - | chr7_3:64470897-64470916 | Msa1116690:intron | 35.0% |
| TTTCTTGAACGCATGACTTT+GGG | - | chr7_3:64470898-64470917 | Msa1116690:intron | 35.0% | |
| ATACTTTACCCGTTGATGTA+CGG | - | chr7_3:64470942-64470961 | Msa1116690:intron | 35.0% | |
| CACAGTGAAAATGTTCAGAT+TGG | + | chr7_3:64470988-64471007 | None:intergenic | 35.0% | |
| ! | CTGAACATTTTCACTGTGTT+TGG | - | chr7_3:64470990-64471009 | Msa1116690:intron | 35.0% |
| CGGTACTTTATGGATAATCA+CGG | - | chr7_3:64471018-64471037 | Msa1116690:intron | 35.0% | |
| !! | CGGATGGAGTACTTTTTGAA+TGG | + | chr7_3:64468478-64468497 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+TGG | + | chr7_3:64468737-64468756 | None:intergenic | 40.0% |
| !! | GTGTGGAGAGTATTAATTGG+AGG | - | chr7_3:64468632-64468651 | Msa1116690:three_prime_UTR | 40.0% |
| !!! | TGACACTCATTTTGAAACGG+AGG | - | chr7_3:64468736-64468755 | Msa1116690:three_prime_UTR | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr7_3:64468737-64468756 | Msa1116690:three_prime_UTR | 40.0% |
| GCTAGCAACTGATTGGATAA+TGG | - | chr7_3:64468789-64468808 | Msa1116690:three_prime_UTR | 40.0% | |
| TTTCGGAGGATTTGAATGAC+TGG | - | chr7_3:64468998-64469017 | Msa1116690:CDS | 40.0% | |
| TTCGGAGGATTTGAATGACT+GGG | - | chr7_3:64468999-64469018 | Msa1116690:CDS | 40.0% | |
| GTTTGTCTTAGTCCATTGGA+TGG | - | chr7_3:64469558-64469577 | Msa1116690:intron | 40.0% | |
| ! | ATCTCATGGTAGTGAAGTCT+TGG | - | chr7_3:64469807-64469826 | Msa1116690:intron | 40.0% |
| ! | AAGCAACTGAAAAGCGTGAA+TGG | + | chr7_3:64469899-64469918 | None:intergenic | 40.0% |
| ATGGAAGATAAGAGACTGGT+TGG | + | chr7_3:64470201-64470220 | None:intergenic | 40.0% | |
| TGCTGGATCTTCATGCAAAT+TGG | - | chr7_3:64470259-64470278 | Msa1116690:intron | 40.0% | |
| GCTGGATCTTCATGCAAATT+GGG | - | chr7_3:64470260-64470279 | Msa1116690:intron | 40.0% | |
| ! | TCATGCAAATTGGGTTGCAA+TGG | - | chr7_3:64470269-64470288 | Msa1116690:intron | 40.0% |
| GCAACTGCAGATTCAACAAA+TGG | - | chr7_3:64470300-64470319 | Msa1116690:intron | 40.0% | |
| !!! | ACAAATGGTGTTGCTTTTGC+TGG | - | chr7_3:64470315-64470334 | Msa1116690:intron | 40.0% |
| ! | TCAGGCTTTTCCTCTTTTTC+AGG | + | chr7_3:64470360-64470379 | None:intergenic | 40.0% |
| GAAGCTGACAGTTACTGAAA+TGG | - | chr7_3:64470428-64470447 | Msa1116690:CDS | 40.0% | |
| AAATCTTCAGCTGATGCTGA+TGG | - | chr7_3:64470504-64470523 | Msa1116690:CDS | 40.0% | |
| GATTATAAGAATGTCGTGGG+AGG | - | chr7_3:64470540-64470559 | Msa1116690:CDS | 40.0% | |
| ! | TTTCATGGGATTGGCAGTTA+TGG | - | chr7_3:64470566-64470585 | Msa1116690:CDS | 40.0% |
| AGAGAGCCTAAACACTCATT+AGG | - | chr7_3:64470610-64470629 | Msa1116690:CDS | 40.0% | |
| AAAACGACAAGAAAGGTCGA+CGG | + | chr7_3:64470648-64470667 | None:intergenic | 40.0% | |
| TACTTTACCCGTTGATGTAC+GGG | - | chr7_3:64470943-64470962 | Msa1116690:intron | 40.0% | |
| TTTCACTGTGTTTGGTACTG+CGG | - | chr7_3:64470998-64471017 | Msa1116690:intron | 40.0% | |
| TTTGGTACTGCGGTACTTTA+TGG | - | chr7_3:64471008-64471027 | Msa1116690:intron | 40.0% | |
| GCTTCGCTGCAAAGGAAATA+AGG | + | chr7_3:64468771-64468790 | None:intergenic | 45.0% | |
| !! | GCAACTGATTGGATAATGGG+CGG | - | chr7_3:64468793-64468812 | Msa1116690:three_prime_UTR | 45.0% |
| ACCTCTCCAAACACCATTCT+CGG | + | chr7_3:64469072-64469091 | None:intergenic | 45.0% | |
| TATGTGGGTTCAGAGTCTGT+TGG | - | chr7_3:64469493-64469512 | Msa1116690:intron | 45.0% | |
| CAGATCCAAGATAATCCACC+AGG | + | chr7_3:64469701-64469720 | None:intergenic | 45.0% | |
| ACAAGACAATCCTTGGGAGA+AGG | + | chr7_3:64469841-64469860 | None:intergenic | 45.0% | |
| ! | TCCCAAGGATTGTCTTGTTG+AGG | - | chr7_3:64469843-64469862 | Msa1116690:intron | 45.0% |
| GCCTCAACAAGACAATCCTT+GGG | + | chr7_3:64469847-64469866 | None:intergenic | 45.0% | |
| AGCCTCAACAAGACAATCCT+TGG | + | chr7_3:64469848-64469867 | None:intergenic | 45.0% | |
| AAAGCGTGAATGGCATGCTT+AGG | + | chr7_3:64469889-64469908 | None:intergenic | 45.0% | |
| ! | GTTGCTTAGCTCAAGTGTTG+AGG | - | chr7_3:64469912-64469931 | Msa1116690:intron | 45.0% |
| !! | CAATGGATTGCACAACAGTC+TGG | + | chr7_3:64470092-64470111 | None:intergenic | 45.0% |
| TCGAAGAAACTAGTCACTGC+AGG | + | chr7_3:64470153-64470172 | None:intergenic | 45.0% | |
| TTCTTCGAATCACAGCTTGC+AGG | - | chr7_3:64470165-64470184 | Msa1116690:intron | 45.0% | |
| GGACATGGAAGATAAGAGAC+TGG | + | chr7_3:64470205-64470224 | None:intergenic | 45.0% | |
| ACATTTCCTGACTGAGACTC+AGG | + | chr7_3:64470378-64470397 | None:intergenic | 45.0% | |
| GAAATGGAGTCTTCATGCAC+AGG | - | chr7_3:64470790-64470809 | Msa1116690:intron | 45.0% | |
| ! | GACTTTGGGAAAGTGTGGAT+TGG | - | chr7_3:64470912-64470931 | Msa1116690:intron | 45.0% |
| TTGGTCCATGACGAACACAT+TGG | + | chr7_3:64470969-64470988 | None:intergenic | 45.0% | |
| ! | AGTTGCTAGCTTCGCTGCAA+AGG | + | chr7_3:64468779-64468798 | None:intergenic | 50.0% |
| CAGCGAAGCTAGCAACTGAT+TGG | - | chr7_3:64468782-64468801 | Msa1116690:three_prime_UTR | 50.0% | |
| !! | ACTGATTGGATAATGGGCGG+TGG | - | chr7_3:64468796-64468815 | Msa1116690:three_prime_UTR | 50.0% |
| AACCACGGTTACGTATCCAG+CGG | - | chr7_3:64468882-64468901 | Msa1116690:exon | 50.0% | |
| CCCTGAGATAAAACCCTCGT+CGG | + | chr7_3:64468940-64468959 | None:intergenic | 50.0% | |
| !! | CCGACGAGGGTTTTATCTCA+GGG | - | chr7_3:64468937-64468956 | Msa1116690:CDS | 50.0% |
| !! | CGACGAGGGTTTTATCTCAG+GGG | - | chr7_3:64468938-64468957 | Msa1116690:CDS | 50.0% |
| TGGGTTCAGAGTCTGTTGGA+TGG | - | chr7_3:64469497-64469516 | Msa1116690:intron | 50.0% | |
| GGGTTCAGAGTCTGTTGGAT+GGG | - | chr7_3:64469498-64469517 | Msa1116690:intron | 50.0% | |
| !!! | GGTGTTGCTTTTGCTGGTTC+TGG | - | chr7_3:64470321-64470340 | Msa1116690:intron | 50.0% |
| GAAAAGCCTGAGTCTCAGTC+AGG | - | chr7_3:64470369-64470388 | Msa1116690:CDS | 50.0% | |
| TCTTCAGCTGATGCTGATGG+AGG | - | chr7_3:64470507-64470526 | Msa1116690:CDS | 50.0% | |
| TGCTGATGGAGGCAGTTTCA+TGG | - | chr7_3:64470518-64470537 | Msa1116690:CDS | 50.0% | |
| TGTCGTGGGAGGAAGTTTCA+TGG | - | chr7_3:64470551-64470570 | Msa1116690:CDS | 50.0% | |
| GTCGTGGGAGGAAGTTTCAT+GGG | - | chr7_3:64470552-64470571 | Msa1116690:CDS | 50.0% | |
| GGGAGGAAGTTTCATGGGAT+TGG | - | chr7_3:64470557-64470576 | Msa1116690:CDS | 50.0% | |
| TGGAGTCTTCATGCACAGGT+CGG | - | chr7_3:64470794-64470813 | Msa1116690:intron | 50.0% | |
| ! | CGCATGACTTTGGGAAAGTG+TGG | - | chr7_3:64470907-64470926 | Msa1116690:intron | 50.0% |
| ACATTGGCCCGTACATCAAC+GGG | + | chr7_3:64470953-64470972 | None:intergenic | 50.0% | |
| CACATTGGCCCGTACATCAA+CGG | + | chr7_3:64470954-64470973 | None:intergenic | 50.0% | |
| !! | GATTGGATAATGGGCGGTGG+CGG | - | chr7_3:64468799-64468818 | Msa1116690:three_prime_UTR | 55.0% |
| CGTCGCTAGGTCAGGATTCA+GGG | - | chr7_3:64468858-64468877 | Msa1116690:three_prime_UTR | 55.0% | |
| GTCGCTAGGTCAGGATTCAG+GGG | - | chr7_3:64468859-64468878 | Msa1116690:three_prime_UTR | 55.0% | |
| GTCAGGATTCAGGGGAACCA+CGG | - | chr7_3:64468867-64468886 | Msa1116690:three_prime_UTR | 55.0% | |
| CGTATCCAGCGGAGAAACAG+TGG | - | chr7_3:64468893-64468912 | Msa1116690:CDS | 55.0% | |
| CAGCGGAGAAACAGTGGTCT+CGG | - | chr7_3:64468899-64468918 | Msa1116690:CDS | 55.0% | |
| TAAAACCCTCGTCGGCGATG+AGG | + | chr7_3:64468932-64468951 | None:intergenic | 55.0% | |
| !! | GCCGACGAGGGTTTTATCTC+AGG | - | chr7_3:64468936-64468955 | Msa1116690:CDS | 55.0% |
| ATCTCAGGGGACCAAAACCG+CGG | - | chr7_3:64468951-64468970 | Msa1116690:CDS | 55.0% | |
| CCAAACACCATTCTCGGCGT+AGG | + | chr7_3:64469066-64469085 | None:intergenic | 55.0% | |
| CCTACGCCGAGAATGGTGTT+TGG | - | chr7_3:64469063-64469082 | Msa1116690:CDS | 55.0% | |
| GCCGAGAATGGTGTTTGGAG+AGG | - | chr7_3:64469068-64469087 | Msa1116690:CDS | 55.0% | |
| TGGAGAGGTTCCGACGTTGA+AGG | - | chr7_3:64469083-64469102 | Msa1116690:CDS | 55.0% | |
| GGTTCCGACGTTGAAGGAAG+CGG | - | chr7_3:64469089-64469108 | Msa1116690:CDS | 55.0% | |
| TCCTCCGCTTCCTTCAACGT+CGG | + | chr7_3:64469096-64469115 | None:intergenic | 55.0% | |
| GGTTCTGTCTCCTTCTCCCA+AGG | - | chr7_3:64469828-64469847 | Msa1116690:intron | 55.0% | |
| !! | ATGGCATGCTTAGGCACCGA+AGG | + | chr7_3:64469880-64469899 | None:intergenic | 55.0% |
| !! | TAGCTCAAGTGTTGAGGCCC+AGG | - | chr7_3:64469918-64469937 | Msa1116690:intron | 55.0% |
| ACGGGCCAATGTGTTCGTCA+TGG | - | chr7_3:64470961-64470980 | Msa1116690:intron | 55.0% | |
| GCGTCGCTAGGTCAGGATTC+AGG | - | chr7_3:64468857-64468876 | Msa1116690:three_prime_UTR | 60.0% | |
| CTCCGCTGGATACGTAACCG+TGG | + | chr7_3:64468887-64468906 | None:intergenic | 60.0% | |
| ! | CGAGACCACTGTTTCTCCGC+TGG | + | chr7_3:64468901-64468920 | None:intergenic | 60.0% |
| ! | AGGCTTCACGTCCGCGGTTT+TGG | + | chr7_3:64468965-64468984 | None:intergenic | 60.0% |
| CGTGAAGCCTCTGCACACGT+CGG | - | chr7_3:64468975-64468994 | Msa1116690:CDS | 60.0% | |
| !! | GCCTCTGCACACGTCGGTTT+CGG | - | chr7_3:64468981-64469000 | Msa1116690:CDS | 60.0% |
| TCCGAAACCGACGTGTGCAG+AGG | + | chr7_3:64468985-64469004 | None:intergenic | 60.0% | |
| !! | TCTGCACACGTCGGTTTCGG+AGG | - | chr7_3:64468984-64469003 | Msa1116690:CDS | 60.0% |
| TGGAGAGCCTACGCCGAGAA+TGG | - | chr7_3:64469056-64469075 | Msa1116690:CDS | 60.0% | |
| TCCGACGTTGAAGGAAGCGG+AGG | - | chr7_3:64469092-64469111 | Msa1116690:CDS | 60.0% | |
| GAAGGAAGCGGAGGAAGCCA+CGG | - | chr7_3:64469101-64469120 | Msa1116690:CDS | 60.0% | |
| CGCGTGCTTCAATTCAGCCG+TGG | + | chr7_3:64469121-64469140 | None:intergenic | 60.0% | |
| !! | CGGTGGCGGAACGATGAGGA+CGG | - | chr7_3:64468813-64468832 | Msa1116690:three_prime_UTR | 65.0% |
| TGACCTAGCGACGCCGATGC+CGG | + | chr7_3:64468851-64468870 | None:intergenic | 65.0% | |
| GTGCAGAGGCTTCACGTCCG+CGG | + | chr7_3:64468971-64468990 | None:intergenic | 65.0% | |
| !! | TGGGCGGTGGCGGAACGATG+AGG | - | chr7_3:64468809-64468828 | Msa1116690:three_prime_UTR | 70.0% |
| AGGACGGCAGCCAAGCTCGC+CGG | - | chr7_3:64468829-64468848 | Msa1116690:three_prime_UTR | 70.0% | |
| GCAGCCAAGCTCGCCGGCAT+CGG | - | chr7_3:64468835-64468854 | Msa1116690:three_prime_UTR | 70.0% | |
| !! | GGCATCGGCGTCGCTAGGTC+AGG | - | chr7_3:64468850-64468869 | Msa1116690:three_prime_UTR | 70.0% |
| GACGCCGATGCCGGCGAGCT+TGG | + | chr7_3:64468842-64468861 | None:intergenic | 75.0% | |
| !! | TCGCCGGCATCGGCGTCGCT+AGG | - | chr7_3:64468845-64468864 | Msa1116690:three_prime_UTR | 75.0% |
| ACCGCGCCTCATCGCCGACG+AGG | - | chr7_3:64468923-64468942 | Msa1116690:CDS | 75.0% | |
| CCCTCGTCGGCGATGAGGCG+CGG | + | chr7_3:64468927-64468946 | None:intergenic | 75.0% | |
| CCGCGCCTCATCGCCGACGA+GGG | - | chr7_3:64468924-64468943 | Msa1116690:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 64468422 | 64471089 | 64468422 | ID=Msa1116690;Name=Msa1116690 |
| chr7_3 | mRNA | 64468422 | 64471089 | 64468422 | ID=Msa1116690-mRNA-1;Parent=Msa1116690;Name=Msa1116690-mRNA-1;_AED=0.08;_eAED=0.08;_QI=114|1|1|1|0.75|0.6|5|469|305 |
| chr7_3 | exon | 64468422 | 64469201 | 64468422 | ID=Msa1116690-mRNA-1:exon:15268;Parent=Msa1116690-mRNA-1 |
| chr7_3 | exon | 64469325 | 64469418 | 64469325 | ID=Msa1116690-mRNA-1:exon:15267;Parent=Msa1116690-mRNA-1 |
| chr7_3 | exon | 64469572 | 64469743 | 64469572 | ID=Msa1116690-mRNA-1:exon:15266;Parent=Msa1116690-mRNA-1 |
| chr7_3 | exon | 64470363 | 64470753 | 64470363 | ID=Msa1116690-mRNA-1:exon:15265;Parent=Msa1116690-mRNA-1 |
| chr7_3 | exon | 64471026 | 64471089 | 64471026 | ID=Msa1116690-mRNA-1:exon:15264;Parent=Msa1116690-mRNA-1 |
| chr7_3 | five_prime_UTR | 64471026 | 64471089 | 64471026 | ID=Msa1116690-mRNA-1:five_prime_utr;Parent=Msa1116690-mRNA-1 |
| chr7_3 | five_prime_UTR | 64470704 | 64470753 | 64470704 | ID=Msa1116690-mRNA-1:five_prime_utr;Parent=Msa1116690-mRNA-1 |
| chr7_3 | CDS | 64470363 | 64470703 | 64470363 | ID=Msa1116690-mRNA-1:cds;Parent=Msa1116690-mRNA-1 |
| chr7_3 | CDS | 64469572 | 64469743 | 64469572 | ID=Msa1116690-mRNA-1:cds;Parent=Msa1116690-mRNA-1 |
| chr7_3 | CDS | 64469325 | 64469418 | 64469325 | ID=Msa1116690-mRNA-1:cds;Parent=Msa1116690-mRNA-1 |
| chr7_3 | CDS | 64468891 | 64469201 | 64468891 | ID=Msa1116690-mRNA-1:cds;Parent=Msa1116690-mRNA-1 |
| chr7_3 | three_prime_UTR | 64468422 | 64468890 | 64468422 | ID=Msa1116690-mRNA-1:three_prime_utr;Parent=Msa1116690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
