AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1000940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1000940 MtrunA17_Chr6g0487211 98.786 659 7 1 1 658 1 659 0.0 1353
Msa1000940 MtrunA17_Chr3g0140571 77.143 595 134 2 65 658 3 596 0.0 983
Msa1000940 MtrunA17_Chr1g0206941 77.479 595 132 2 65 658 3 596 0.0 981
Msa1000940 MtrunA17_Chr4g0056881 60.417 480 131 2 65 512 3 455 0.0 604
Msa1000940 MtrunA17_Chr4g0056871 83.562 146 24 0 513 658 11 156 3.98e-81 253
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1000940 AT4G26300.5 66.921 656 193 6 6 658 19 653 0.0 906
Msa1000940 AT4G26300.1 68.146 631 194 4 29 658 18 642 0.0 905
Msa1000940 AT4G26300.2 72.109 588 158 3 71 658 35 616 0.0 904
Msa1000940 AT4G26300.3 72.109 588 158 3 71 658 48 629 0.0 903
Msa1000940 AT4G26300.4 72.109 588 158 3 71 658 9 590 0.0 903
Msa1000940 AT1G66530.1 71.186 590 158 4 69 658 13 590 0.0 892

Find 169 sgRNAs with CRISPR-Local

Find 615 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCTATATGGGTACATTT+TGG 0.209197 6_4:+84296496 None:intergenic
TGCATTTCCTTTGCTATATT+AGG 0.230117 6_4:+84299518 None:intergenic
CACCTTAGATCTACCATAAT+TGG 0.239076 6_4:-84299488 Msa1000940:CDS
ATTGAGAAGCTGGATAAATT+AGG 0.258389 6_4:-84297223 Msa1000940:CDS
TCATGAATCTGAGCGTTTAT+TGG 0.264785 6_4:-84294407 Msa1000940:CDS
CATGAATCTGAGCGTTTATT+GGG 0.272551 6_4:-84294406 Msa1000940:CDS
CCTTCCCTTTGGCAGGTTGT+AGG 0.275119 6_4:-84293760 Msa1000940:intron
ACAGAATGGGGTTATTGTTT+TGG 0.275705 6_4:-84294431 Msa1000940:intron
TTCTAAAATGAAATTTGTTC+TGG 0.279588 6_4:-84293568 Msa1000940:three_prime_UTR
GAACAAGACCAAAACCTATA+TGG 0.279776 6_4:+84296485 None:intergenic
GGCTAATGTGTCTCCAATTA+TGG 0.291070 6_4:+84299475 None:intergenic
TCAATAACCCCGGGGATATA+TGG 0.291279 6_4:+84297241 None:intergenic
GGAATGACGGAAAACGATTT+AGG 0.294789 6_4:-84296459 Msa1000940:CDS
CTGTTTCACTAACATCTTCT+TGG 0.301819 6_4:+84298809 None:intergenic
TGCAAATACAATAAACAAAA+AGG 0.303230 6_4:+84293532 None:intergenic
AAATGTACCCATATAGGTTT+TGG 0.307172 6_4:-84296493 Msa1000940:CDS
AACAAATTTGTGATATTAGT+AGG 0.317651 6_4:-84297936 Msa1000940:CDS
CCAAGTGAAATGACAAGATT+TGG 0.322975 6_4:-84293392 Msa1000940:three_prime_UTR
TCTCTTCAACCTTCACGTTC+TGG 0.323223 6_4:-84303382 Msa1000940:intron
GAAAATGAGATAATCGATTC+AGG 0.333607 6_4:+84303416 None:intergenic
TTGTGCCCTCAGCTTAAATT+CGG 0.343494 6_4:+84298093 None:intergenic
GTAATAATGCAATGGGTATA+TGG 0.356456 6_4:-84300250 Msa1000940:CDS
ACACTTTGATATGCTATATA+AGG 0.359400 6_4:-84296858 Msa1000940:intron
TTGTTCTATCATCAGGAAAT+CGG 0.359703 6_4:-84294761 Msa1000940:CDS
ATTGTGTATGTTACTGATAT+TGG 0.367298 6_4:-84296890 Msa1000940:CDS
ATTTACTTGATGAAGCTAAA+AGG 0.368508 6_4:-84296405 Msa1000940:CDS
TGATCAGATGCTTAGTGATA+AGG 0.369123 6_4:-84295954 Msa1000940:intron
GATGTTTGCACCGCCAAAAC+TGG 0.377872 6_4:-84300443 Msa1000940:CDS
TGATGAAGATTGTTGAGTTT+TGG 0.385201 6_4:+84303217 None:intergenic
TCACTAACATCTTCTTGGTT+TGG 0.385208 6_4:+84298814 None:intergenic
AACAGCCATCGGAGATCTTC+AGG 0.387102 6_4:-84298791 Msa1000940:intron
GAGCAGTGAGGTTGTTCGTT+TGG 0.392276 6_4:-84296431 Msa1000940:CDS
CAACCGATCTCGCATCGCTT+TGG 0.393057 6_4:-84297102 Msa1000940:intron
TTGTGTATGTTACTGATATT+GGG 0.393093 6_4:-84296889 Msa1000940:CDS
TATCCAAAATGTACCCATAT+AGG 0.395742 6_4:-84296499 Msa1000940:CDS
ATGGGTTATAACTTGTAAAC+AGG 0.397197 6_4:+84293652 None:intergenic
CTAGGATTTGTTCTATCATC+AGG 0.401484 6_4:-84294768 Msa1000940:CDS
AAGCTCAAAGGAAAGGAAAC+TGG 0.405680 6_4:-84300224 Msa1000940:CDS
CCAAATCTTGTCATTTCACT+TGG 0.414703 6_4:+84293392 None:intergenic
CATCAGAGGCAATTGGTTAC+GGG 0.416031 6_4:-84296189 Msa1000940:CDS
ACATCAGAGGCAATTGGTTA+CGG 0.418994 6_4:-84296190 Msa1000940:CDS
ATTGTTACTGGAAACTGATA+AGG 0.423090 6_4:-84293471 Msa1000940:three_prime_UTR
GTCGAAATCATGTTGGTGAC+TGG 0.424997 6_4:-84299415 Msa1000940:CDS
AAAGTTCTATTCTAATTGTC+AGG 0.425546 6_4:-84294100 Msa1000940:intron
TTCTAGATACAACTAATGAT+TGG 0.428395 6_4:-84296234 Msa1000940:intron
CTCCAATTATGGTAGATCTA+AGG 0.428684 6_4:+84299486 None:intergenic
TGGAGTTCAACTGGAGGAAA+TGG 0.431540 6_4:-84297884 Msa1000940:intron
GACAAGATTTGGACGTTATG+TGG 0.435414 6_4:-84293381 Msa1000940:three_prime_UTR
ATTTAAGCTGAGGGCACAAC+AGG 0.437434 6_4:-84298089 Msa1000940:CDS
GGCGGTGCAAACATCAACTA+AGG 0.438474 6_4:+84300451 None:intergenic
TCATGCTCTTTAGCTGGTCC+AGG 0.440742 6_4:-84299804 Msa1000940:CDS
TCAACGTCTTGGAGTTCAAC+TGG 0.441535 6_4:-84297893 Msa1000940:CDS
TCAACCATAGCCCTCCTGAT+TGG 0.449478 6_4:+84299551 None:intergenic
AAGACAACATTAACAAATCC+TGG 0.452633 6_4:+84299786 None:intergenic
TTCATTTGAACTCCTTCAGA+TGG 0.452906 6_4:+84293633 None:intergenic
GAGAAAACATCAGAGGCAAT+TGG 0.457627 6_4:-84296196 Msa1000940:CDS
CGTGAAGGTTGAAGAGAAGG+TGG 0.459846 6_4:+84303388 None:intergenic
ACAGGCAGTGGTTCTGCTCC+AGG 0.461427 6_4:-84298071 Msa1000940:intron
AGGTAATCACACAGCACATT+AGG 0.467880 6_4:+84294150 None:intergenic
TTTCAGGCCTTTAGGCGTGC+AGG 0.469388 6_4:-84296547 Msa1000940:intron
GATTATACCTGTCCAATAGC+AGG 0.471468 6_4:+84300188 None:intergenic
CCCCGGGGTTATTGAGAAGC+TGG 0.473086 6_4:-84297233 Msa1000940:CDS
TGTTCTATCATCAGGAAATC+GGG 0.475649 6_4:-84294760 Msa1000940:CDS
AACAAGACCAAAACCTATAT+GGG 0.476698 6_4:+84296486 None:intergenic
GGCACAACATCTTCCTCATC+TGG 0.481833 6_4:+84300473 None:intergenic
AAAACTGGCAGTGTAAAATT+CGG 0.483146 6_4:-84300428 Msa1000940:CDS
GGCGTGCAGGTTGGCTTCCA+CGG 0.483559 6_4:-84296534 Msa1000940:CDS
GGGCACCTCGACTTCCAATC+AGG 0.485972 6_4:-84299565 Msa1000940:CDS
TTGCCATGCCTTGCGATACC+TGG 0.487038 6_4:+84297957 None:intergenic
TAACCAAAGCGATGCGAGAT+CGG 0.488721 6_4:+84297099 None:intergenic
AAGCCAACCTGCACGCCTAA+AGG 0.488759 6_4:+84296540 None:intergenic
TAAAATTCGGTGATTATCAA+TGG 0.490072 6_4:-84300415 Msa1000940:intron
ATAGATTCATGCTCTTTAGC+TGG 0.490847 6_4:-84299810 Msa1000940:CDS
ATTTGCATGAGAGGTGTAAG+AGG 0.493616 6_4:-84293516 Msa1000940:three_prime_UTR
AGACATTGAAGAAGTAAAGA+AGG 0.494672 6_4:-84294734 Msa1000940:intron
TATCTCAGAGTGGGGATACC+AGG 0.495254 6_4:-84297975 Msa1000940:intron
TGGTGCAGTAATAATGCAAT+GGG 0.498904 6_4:-84300257 Msa1000940:intron
TCCAGCTTCTCAATAACCCC+GGG 0.501106 6_4:+84297232 None:intergenic
GCTGGATAAATTAGGATTGG+TGG 0.502134 6_4:-84297215 Msa1000940:CDS
TTCTATAATCCATATATCCC+CGG 0.508489 6_4:-84297250 Msa1000940:CDS
ATGTTGTCTTGTCAAAGCAT+TGG 0.509068 6_4:-84299773 Msa1000940:CDS
TGTGCCCTCAGCTTAAATTC+GGG 0.511525 6_4:+84298094 None:intergenic
TCGAAATCATGTTGGTGACT+GGG 0.512556 6_4:-84299414 Msa1000940:CDS
GACAAGGTCTATCAACGTCT+TGG 0.512705 6_4:-84297904 Msa1000940:CDS
GAAGCTGGATAAATTAGGAT+TGG 0.513016 6_4:-84297218 Msa1000940:CDS
ATTTGCTCTATGCACATGCT+AGG 0.514570 6_4:-84294786 Msa1000940:CDS
ACAAATTTGTGATATTAGTA+GGG 0.515922 6_4:-84297935 Msa1000940:CDS
TTCCTCTCCTAATATAGCAA+AGG 0.518979 6_4:-84299525 Msa1000940:CDS
ACTTCCAATCAGGAGGGCTA+TGG 0.520747 6_4:-84299555 Msa1000940:CDS
TCTATAATCCATATATCCCC+GGG 0.521268 6_4:-84297249 Msa1000940:CDS
GTCAAAGCATTGGATAGCTC+AGG 0.522519 6_4:-84299763 Msa1000940:intron
GGAAAGGAAACTGGATTCAA+AGG 0.524359 6_4:-84300215 Msa1000940:CDS
TTTCGTAAAGATTTCTGCCA+AGG 0.524425 6_4:+84294122 None:intergenic
ATGAAGACTTACAATAGATA+AGG 0.525752 6_4:+84303157 None:intergenic
AGGCCTTTAGGCGTGCAGGT+TGG 0.532398 6_4:-84296543 Msa1000940:CDS
GATTGGAAGTCGAGGTGCCC+AGG 0.533086 6_4:+84299568 None:intergenic
GTTTATTGTATTTGCATGAG+AGG 0.534494 6_4:-84293525 Msa1000940:three_prime_UTR
GGTCTTGTTCTTGGGAATGA+CGG 0.535827 6_4:-84296472 Msa1000940:CDS
CACGGTTGTGAAGAAGAAGA+AGG 0.538233 6_4:+84303521 None:intergenic
CATGAATCTATCATTTCAGA+TGG 0.541436 6_4:+84299822 None:intergenic
TGTAAACAGGTTCAATTCCA+AGG 0.543827 6_4:+84293665 None:intergenic
GTACATTACCACGTTCAAGA+AGG 0.544032 6_4:+84296368 None:intergenic
GGTTGAAATTGAACTTTCCA+CGG 0.546207 6_4:+84303503 None:intergenic
TTCCTTTGCTATATTAGGAG+AGG 0.546637 6_4:+84299523 None:intergenic
ATCCAGCTTCTCAATAACCC+CGG 0.548776 6_4:+84297231 None:intergenic
GCTGAGGGCACAACAGGCAG+TGG 0.549833 6_4:-84298083 Msa1000940:CDS
AGATTTCTGCCAAGGTATAG+AGG 0.551819 6_4:+84294130 None:intergenic
TACATTACCACGTTCAAGAA+GGG 0.554480 6_4:+84296369 None:intergenic
TTGGTGCAGTAATAATGCAA+TGG 0.559513 6_4:-84300258 Msa1000940:intron
TGGAGGAAGATTGTTAATGA+TGG 0.561457 6_4:+84299842 None:intergenic
TAAATGATGGTATTGATACC+TGG 0.561596 6_4:-84299586 Msa1000940:CDS
TCATTTGAACTCCTTCAGAT+GGG 0.565120 6_4:+84293634 None:intergenic
CTTCTTCTTCTTCACAACCG+TGG 0.566648 6_4:-84303520 Msa1000940:five_prime_UTR
TTTGCATGAGAGGTGTAAGA+GGG 0.567439 6_4:-84293515 Msa1000940:three_prime_UTR
AAAAGTCTACTAGTTTCCTC+AGG 0.570208 6_4:+84293733 None:intergenic
ATTATACCTGTCCAATAGCA+GGG 0.574659 6_4:+84300189 None:intergenic
GTCACCAACATGATTTCGAC+GGG 0.578960 6_4:+84299418 None:intergenic
GTACAAAGGATGCTAAATGA+TGG 0.581813 6_4:-84299599 Msa1000940:CDS
GGTATATGGTCGAAGCTCAA+AGG 0.583447 6_4:-84300236 Msa1000940:CDS
GCTCGTGTGATATATGTTGA+GGG 0.584942 6_4:-84297178 Msa1000940:CDS
ACAAGTTATAACCCATCTGA+AGG 0.586787 6_4:-84293645 Msa1000940:exon
CACCTCGACTTCCAATCAGG+AGG 0.587835 6_4:-84299562 Msa1000940:CDS
GAACGTGAAGGTTGAAGAGA+AGG 0.588025 6_4:+84303385 None:intergenic
ACGTGAAAATTCAAGCATGC+GGG 0.589466 6_4:+84299454 None:intergenic
CACGTGAAAATTCAAGCATG+CGG 0.589509 6_4:+84299453 None:intergenic
AACTAATGATTGGTCTGAGG+AGG 0.598206 6_4:-84296224 Msa1000940:CDS
ACGGAAAACGATTTAGGAGT+CGG 0.602408 6_4:-84296453 Msa1000940:CDS
CGAAATCATGTTGGTGACTG+GGG 0.602786 6_4:-84299413 Msa1000940:CDS
ATGGTCGAAGCTCAAAGGAA+AGG 0.604469 6_4:-84300231 Msa1000940:CDS
AGTCACCAACATGATTTCGA+CGG 0.606648 6_4:+84299417 None:intergenic
TCCTACTGCAGAGCGTACAA+AGG 0.608375 6_4:-84299613 Msa1000940:intron
AAAGACAATTGTGCCAGATG+AGG 0.611264 6_4:-84300486 Msa1000940:CDS
CTTACAATAGATAAGGTAGG+AGG 0.611439 6_4:+84303164 None:intergenic
ATTATTGCTGTGAAAAGAGA+TGG 0.613326 6_4:-84297142 Msa1000940:CDS
TCTATAAGGCATCTAAAGTG+AGG 0.617569 6_4:-84298129 Msa1000940:CDS
TGCTCGTGTGATATATGTTG+AGG 0.619716 6_4:-84297179 Msa1000940:CDS
TGTTGGTGACTGGGGAACGC+AGG 0.620212 6_4:-84299405 Msa1000940:intron
AAATGATGGTATTGATACCT+GGG 0.620700 6_4:-84299585 Msa1000940:CDS
GCCCTCCTGATTGGAAGTCG+AGG 0.625087 6_4:+84299560 None:intergenic
TGGGGATACCAGGTATCGCA+AGG 0.626622 6_4:-84297965 Msa1000940:CDS
AGACTTACAATAGATAAGGT+AGG 0.630403 6_4:+84303161 None:intergenic
TGATCCCGAATTTAAGCTGA+GGG 0.631435 6_4:-84298098 Msa1000940:CDS
GTTACCCGTCGAAATCATGT+TGG 0.631464 6_4:-84299422 Msa1000940:CDS
ATACCAGGTATCGCAAGGCA+TGG 0.632918 6_4:-84297960 Msa1000940:CDS
TCTCACCTGAAGATCTCCGA+TGG 0.633055 6_4:+84298786 None:intergenic
ATGAATCTGAGCGTTTATTG+GGG 0.635831 6_4:-84294405 Msa1000940:CDS
ACCTCGACTTCCAATCAGGA+GGG 0.641855 6_4:-84299561 Msa1000940:CDS
GCGGTGCAAACATCAACTAA+GGG 0.648232 6_4:+84300452 None:intergenic
ATAGCAAAGGAAATGCATGT+TGG 0.648481 6_4:-84299512 Msa1000940:CDS
TACAACTAATGATTGGTCTG+AGG 0.651844 6_4:-84296227 Msa1000940:CDS
GCAGGTTGTAGGATCGCCTG+AGG 0.653494 6_4:-84293749 Msa1000940:intron
GTGTGATTACCTCTATACCT+TGG 0.653814 6_4:-84294139 Msa1000940:CDS
AGAAGCTGACCAGAACGTGA+AGG 0.654312 6_4:+84303373 None:intergenic
GAATCTATCATTTCAGATGG+AGG 0.659548 6_4:+84299825 None:intergenic
GGAGATTGAGAAAACATCAG+AGG 0.660043 6_4:-84296203 Msa1000940:CDS
ATGATCCCGAATTTAAGCTG+AGG 0.661448 6_4:-84298099 Msa1000940:CDS
GATGTTAGTGAAACAGCCAT+CGG 0.662294 6_4:-84298802 Msa1000940:CDS
ATCAGAGGCAATTGGTTACG+GGG 0.665874 6_4:-84296188 Msa1000940:CDS
TAGTAGGGCTGAGTTTGACA+AGG 0.670631 6_4:-84297920 Msa1000940:CDS
TCATATACTACAATTTCCTG+AGG 0.673818 6_4:-84294380 Msa1000940:intron
AAAACTGCCCTTCTTGAACG+TGG 0.679246 6_4:-84296376 Msa1000940:intron
TTATACCTGTCCAATAGCAG+GGG 0.687064 6_4:+84300190 None:intergenic
GGATTGGTGGAAGATAGTGA+TGG 0.696144 6_4:-84297202 Msa1000940:CDS
ACGTCTTGGAGTTCAACTGG+AGG 0.701002 6_4:-84297890 Msa1000940:CDS
ATTGCTGTGAAAAGAGATGG+TGG 0.705312 6_4:-84297139 Msa1000940:CDS
TATACCTGTCCAATAGCAGG+GGG 0.719296 6_4:+84300191 None:intergenic
ATTTAGGAGTCGGAGCAGTG+AGG 0.728341 6_4:-84296443 Msa1000940:CDS
CTATAATCCATATATCCCCG+GGG 0.746058 6_4:-84297248 Msa1000940:CDS
CCAGCTTCTCAATAACCCCG+GGG 0.768970 6_4:+84297233 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTAGTTTTTTATTGTATT+TGG - chr6_4:84294418-84294437 Msa1000940:CDS 10.0%
!! AGTTATTTATATAACTTATT+TGG - chr6_4:84294792-84294811 Msa1000940:CDS 10.0%
!! AAAAAAAAAAAAAAAAACAC+AGG + chr6_4:84297042-84297061 None:intergenic 10.0%
!!! TTTTTTTTTTTAATTTCTGT+AGG - chr6_4:84297058-84297077 Msa1000940:intron 10.0%
!! ACTAAAATATTATATTTAAG+GGG + chr6_4:84297882-84297901 None:intergenic 10.0%
!! AATAATAGAAAAATAGAAAT+AGG + chr6_4:84299904-84299923 None:intergenic 10.0%
!!! TTGAATTATTTAAATTTTTC+GGG - chr6_4:84301187-84301206 Msa1000940:intron 10.0%
!! TAAAATTAAAGAATATTTAG+CGG + chr6_4:84303057-84303076 None:intergenic 10.0%
!!! TTCTATATTTTCAGTTTTTT+TGG + chr6_4:84293444-84293463 None:intergenic 15.0%
!!! ATCACTTTTTTTTATAATCA+GGG + chr6_4:84294000-84294019 None:intergenic 15.0%
!!! AATCACTTTTTTTTATAATC+AGG + chr6_4:84294001-84294020 None:intergenic 15.0%
!!! TGATTTTGTAAAATTGATTT+TGG - chr6_4:84294270-84294289 Msa1000940:intron 15.0%
!! AATATAAAGTTGTTTATGTT+TGG - chr6_4:84294927-84294946 Msa1000940:intron 15.0%
!!! TTTAGAGATTGATTTTAATT+TGG - chr6_4:84295626-84295645 Msa1000940:intron 15.0%
!!! TGATTATGTAAAATTGATTT+TGG - chr6_4:84295679-84295698 Msa1000940:intron 15.0%
!!! ACAGGTTTTTTTTTTTAAAA+AGG + chr6_4:84296147-84296166 None:intergenic 15.0%
!!! TGTAAAATAATCATAACTTT+TGG + chr6_4:84296286-84296305 None:intergenic 15.0%
!! AAATTATTTATGCCAATTAT+CGG - chr6_4:84297613-84297632 Msa1000940:intron 15.0%
!! CTAAAATATTATATTTAAGG+GGG + chr6_4:84297881-84297900 None:intergenic 15.0%
!!! TTATTTTATTGGCATTTTTT+TGG - chr6_4:84298212-84298231 Msa1000940:intron 15.0%
!! AATGAAAATTATCATTATTG+TGG - chr6_4:84299484-84299503 Msa1000940:CDS 15.0%
!! AACAGAAAACTATTATTTAA+GGG + chr6_4:84300233-84300252 None:intergenic 15.0%
!! AAACAGAAAACTATTATTTA+AGG + chr6_4:84300234-84300253 None:intergenic 15.0%
!! AATATTTCAATGAGTTAAAA+TGG - chr6_4:84300332-84300351 Msa1000940:intron 15.0%
!! ATTAAAAATTTAACGACTAT+AGG + chr6_4:84301297-84301316 None:intergenic 15.0%
!!! CGTTAAATTTTTAATTTTTC+CGG - chr6_4:84301302-84301321 Msa1000940:intron 15.0%
!!! GTTAAATTTTTAATTTTTCC+GGG - chr6_4:84301303-84301322 Msa1000940:intron 15.0%
!! AAATCAAGTTATAATAGATA+TGG + chr6_4:84302248-84302267 None:intergenic 15.0%
!! TTGATATATCATTATTAAAG+TGG - chr6_4:84302637-84302656 Msa1000940:intron 15.0%
!! GCTATATATTCAAATTTATA+TGG - chr6_4:84302871-84302890 Msa1000940:intron 15.0%
!! ATAAATACTATACATCTTAT+TGG - chr6_4:84302984-84303003 Msa1000940:intron 15.0%
!!! TCAAATGAATTTTTTTTCAT+AGG - chr6_4:84303304-84303323 Msa1000940:intron 15.0%
!!! TGCTTATGTAAAATTGATTT+TGG - chr6_4:84294084-84294103 Msa1000940:intron 20.0%
!! TGATTTATGGATTCTAATTA+AGG - chr6_4:84294130-84294149 Msa1000940:CDS 20.0%
!!! TTTTTTAATCAGTAACAAAC+CGG + chr6_4:84294183-84294202 None:intergenic 20.0%
!!! TTTTTTAATCAGTAACAAAC+AGG + chr6_4:84294183-84294202 None:intergenic 20.0%
!!! TAATTTTTTTAGTGTGTGTT+TGG - chr6_4:84294706-84294725 Msa1000940:intron 20.0%
!!! TATTTTGAGTGAATTCATTT+TGG - chr6_4:84294748-84294767 Msa1000940:CDS 20.0%
!!! TACTCAATTTTTAAAGCTTT+TGG - chr6_4:84295162-84295181 Msa1000940:intron 20.0%
!!! TTTTAAAGCTTTTGGAAAAA+AGG - chr6_4:84295170-84295189 Msa1000940:intron 20.0%
!!! TTTTGAAAATCTGTAACAAA+TGG - chr6_4:84295335-84295354 Msa1000940:intron 20.0%
!!! AATTAAAAGTCTGTTTGTTA+CGG - chr6_4:84295571-84295590 Msa1000940:intron 20.0%
!!! TAGAATTGATTCTAACTTTA+AGG - chr6_4:84295735-84295754 Msa1000940:intron 20.0%
!!! CTATCTTTTTTAAAAATCTC+TGG + chr6_4:84296090-84296109 None:intergenic 20.0%
!! ACATAATAAGCTGTAATAAA+TGG - chr6_4:84296303-84296322 Msa1000940:intron 20.0%
!!! AAGGTAAAGAGTTTTTTAAT+TGG - chr6_4:84296646-84296665 Msa1000940:intron 20.0%
!! GTTAAAATGCAATTACATAT+GGG + chr6_4:84296788-84296807 None:intergenic 20.0%
!! AGTTAAAATGCAATTACATA+TGG + chr6_4:84296789-84296808 None:intergenic 20.0%
!! TTACTTATATTGTAGTAAGA+TGG + chr6_4:84296874-84296893 None:intergenic 20.0%
!!! AGTCATTTTTTGTTGAAATT+AGG - chr6_4:84296989-84297008 Msa1000940:intron 20.0%
!! AAAAAAAAAAAACACAGGTT+AGG + chr6_4:84297037-84297056 None:intergenic 20.0%
!! AATATAGTGTATGTTTAATC+TGG - chr6_4:84297586-84297605 Msa1000940:intron 20.0%
!! AATTATTTATGCCAATTATC+GGG - chr6_4:84297614-84297633 Msa1000940:intron 20.0%
!! CACTATAACTACATTTAATT+AGG + chr6_4:84297814-84297833 None:intergenic 20.0%
!! TTACTGAATACATTTCAAAA+AGG - chr6_4:84298302-84298321 Msa1000940:intron 20.0%
!! TACTGAATACATTTCAAAAA+GGG - chr6_4:84298303-84298322 Msa1000940:intron 20.0%
!! TTCATTTATAAGAATTGACA+AGG + chr6_4:84298596-84298615 None:intergenic 20.0%
!! ATTGATATGACAATGTTTAT+AGG - chr6_4:84298624-84298643 Msa1000940:intron 20.0%
!! AACAAATTTGTGATATTAGT+AGG - chr6_4:84298987-84299006 Msa1000940:intron 20.0%
!! ACAAATTTGTGATATTAGTA+GGG - chr6_4:84298988-84299007 Msa1000940:intron 20.0%
!! TCTCTAATGAGATAAAAATA+AGG - chr6_4:84299417-84299436 Msa1000940:CDS 20.0%
!!! AACATGAAATATATTGACTT+AGG - chr6_4:84299936-84299955 Msa1000940:intron 20.0%
!!! ATGATTTTCATGGTATATTA+TGG - chr6_4:84300101-84300120 Msa1000940:intron 20.0%
!! ATCTAGAAGAATATAGAATA+TGG + chr6_4:84300677-84300696 None:intergenic 20.0%
!! AAATCAAAAGAACAAACATA+GGG + chr6_4:84300891-84300910 None:intergenic 20.0%
!!! GACTTTAAACAATTTTTCAA+CGG + chr6_4:84301148-84301167 None:intergenic 20.0%
!!! AATTATTTAAATTTTTCGGG+TGG - chr6_4:84301190-84301209 Msa1000940:intron 20.0%
!!! ATTATTTAAATTTTTCGGGT+GGG - chr6_4:84301191-84301210 Msa1000940:intron 20.0%
!!! GATTTTATACAATTTTGTGT+CGG + chr6_4:84301262-84301281 None:intergenic 20.0%
!!! TTTGGAAAGAAATTTTCATA+AGG + chr6_4:84301984-84302003 None:intergenic 20.0%
!!! TGTGTATTGTTTAATTTTTC+AGG - chr6_4:84302721-84302740 Msa1000940:intron 20.0%
!!! TTTAATTTTTCAGGTTTTTG+AGG - chr6_4:84302730-84302749 Msa1000940:intron 20.0%
!!! TTCTAAAATGAAATTTGTTC+TGG - chr6_4:84303355-84303374 Msa1000940:intron 20.0%
!! TGCAAATACAATAAACAAAA+AGG + chr6_4:84303394-84303413 None:intergenic 20.0%
!!! ATTTTTTATAGCATTGTTAC+TGG - chr6_4:84303440-84303459 Msa1000940:CDS 20.0%
! AGAAGAAGAAGAAAAATGTT+AGG - chr6_4:84293469-84293488 Msa1000940:three_prime_UTR 25.0%
! GAAGAAGAAGAAAAATGTTA+GGG - chr6_4:84293470-84293489 Msa1000940:three_prime_UTR 25.0%
! ATGAAGACTTACAATAGATA+AGG + chr6_4:84293769-84293788 None:intergenic 25.0%
! CGAATTAATGAAGTAATTAG+TGG + chr6_4:84293808-84293827 None:intergenic 25.0%
!!! ACTATATTTTAGTGTGTGTT+TGG - chr6_4:84294045-84294064 Msa1000940:intron 25.0%
! GTTGAATGTAAAGTGATTTA+TGG - chr6_4:84294117-84294136 Msa1000940:CDS 25.0%
! TGGATTCTAATTAAGGTTAA+CGG - chr6_4:84294137-84294156 Msa1000940:CDS 25.0%
! AATTAGCTGTTTAGTGTATT+TGG - chr6_4:84294231-84294250 Msa1000940:intron 25.0%
! GTTGAATGTAAAGTGATTTA+CGG - chr6_4:84294117-84294136 Msa1000940:CDS 25.0%
! AATAAAACCTACAACAGATA+AGG + chr6_4:84294568-84294587 None:intergenic 25.0%
! ATAACTTATTTGGATTGACT+TGG - chr6_4:84294802-84294821 Msa1000940:CDS 25.0%
!! TTTTCATAATCCGTAACAAA+CGG + chr6_4:84295073-84295092 None:intergenic 25.0%
!! ACGGATTATGAAAAAAAATG+TGG - chr6_4:84295079-84295098 Msa1000940:intron 25.0%
! TTAAAAAGTGATCTTCATTC+CGG + chr6_4:84295219-84295238 None:intergenic 25.0%
! TGAAAAAAGTTGTAACAAAC+AGG - chr6_4:84295408-84295427 Msa1000940:intron 25.0%
! TTTCAAACAAACAAACACAA+TGG + chr6_4:84295471-84295490 None:intergenic 25.0%
!! GAAAAATCATATTTGATGAC+TGG + chr6_4:84295497-84295516 None:intergenic 25.0%
!!! AAAAAAGTGATTTTGATGCT+TGG - chr6_4:84294009-84294028 Msa1000940:intron 25.0%
!!! TTGATTTTAATTTGGTTCTG+TGG - chr6_4:84295634-84295653 Msa1000940:intron 25.0%
!!! TCTATATTTGGTTTGATGTT+TGG - chr6_4:84295706-84295725 Msa1000940:intron 25.0%
! AGTCTTTGTAAAATTGATTG+TGG - chr6_4:84295859-84295878 Msa1000940:intron 25.0%
!! AAACATGTCAAAATCAGTTT+TGG - chr6_4:84296038-84296057 Msa1000940:intron 25.0%
!! ACTCTAAAAATTGCTTCAAT+CGG + chr6_4:84296212-84296231 None:intergenic 25.0%
!!! AGCAATTTTTAGAGTCTTTT+TGG - chr6_4:84296217-84296236 Msa1000940:CDS 25.0%
!! TAAAATTCGGTGATTATCAA+TGG - chr6_4:84296508-84296527 Msa1000940:CDS 25.0%
!!! CAATGGTAAGTTCAATTTTT+TGG - chr6_4:84296525-84296544 Msa1000940:CDS 25.0%
! TGTAAGTTAAATAAGTTCCA+AGG - chr6_4:84296564-84296583 Msa1000940:intron 25.0%
! CTTATAGAAATACAAAACCT+TGG + chr6_4:84296584-84296603 None:intergenic 25.0%
! AATGTACAATGCAAATACTT+TGG + chr6_4:84296607-84296626 None:intergenic 25.0%
! TACATAGTCATTAAACTCAT+TGG + chr6_4:84296817-84296836 None:intergenic 25.0%
! ATTATTTATGCCAATTATCG+GGG - chr6_4:84297615-84297634 Msa1000940:intron 25.0%
!! TGTTTTCTTGATAAAGAACA+TGG - chr6_4:84297777-84297796 Msa1000940:intron 25.0%
! GTTAGTCACTAAATTAGTAA+TGG - chr6_4:84297925-84297944 Msa1000940:CDS 25.0%
!!! GAACTCTAAAACATTTTACT+AGG - chr6_4:84297990-84298009 Msa1000940:intron 25.0%
!!! AAAGTTCTCATTTTTGGTAT+TGG - chr6_4:84298013-84298032 Msa1000940:intron 25.0%
!!! GGTTTGGAAATTTTTCAAAA+AGG + chr6_4:84298096-84298115 None:intergenic 25.0%
!! ACTTCTAGTTAATCTTATTC+AGG - chr6_4:84298175-84298194 Msa1000940:intron 25.0%
!!! TTATTGGCATTTTTTTGGTT+CGG - chr6_4:84298217-84298236 Msa1000940:intron 25.0%
! AACTTCTTTGTACTTAAGAA+GGG + chr6_4:84298520-84298539 None:intergenic 25.0%
! TAACTTCTTTGTACTTAAGA+AGG + chr6_4:84298521-84298540 None:intergenic 25.0%
! TCTTAAGTACAAAGAAGTTA+AGG - chr6_4:84298521-84298540 Msa1000940:intron 25.0%
!!! TCACTTATTTTTTCACCTTT+TGG - chr6_4:84298682-84298701 Msa1000940:intron 25.0%
! TTTAAGAGACAAAAACCAAA+AGG + chr6_4:84298700-84298719 None:intergenic 25.0%
! TCTCTTAAATATATTTCCTC+TGG - chr6_4:84298711-84298730 Msa1000940:intron 25.0%
!!! CATTTTTTAGGCATTCTATA+AGG - chr6_4:84298780-84298799 Msa1000940:intron 25.0%
!!! ATTCATTTTTATCTCAGAGT+GGG - chr6_4:84298939-84298958 Msa1000940:intron 25.0%
!! TTTGTGTTTTTCATTATCTG+TGG - chr6_4:84299075-84299094 Msa1000940:intron 25.0%
!!! TGCTTTTTAAATTTATCACG+TGG - chr6_4:84299242-84299261 Msa1000940:intron 25.0%
! ATTATCATTATTGTGGATGA+AGG - chr6_4:84299491-84299510 Msa1000940:CDS 25.0%
! TTATCATTATTGTGGATGAA+GGG - chr6_4:84299492-84299511 Msa1000940:CDS 25.0%
!! TATTCTTCCCTGTAAATTTT+TGG - chr6_4:84299874-84299893 Msa1000940:intron 25.0%
! TAAATAAAGAAAAACTCGAG+TGG - chr6_4:84300010-84300029 Msa1000940:intron 25.0%
! ATTGTGTATGTTACTGATAT+TGG - chr6_4:84300033-84300052 Msa1000940:intron 25.0%
! TTGTGTATGTTACTGATATT+GGG - chr6_4:84300034-84300053 Msa1000940:intron 25.0%
! ACACTTTGATATGCTATATA+AGG - chr6_4:84300065-84300084 Msa1000940:intron 25.0%
!!! AAGTTGATAACAACTTATCA+AGG + chr6_4:84300189-84300208 None:intergenic 25.0%
! TAAGTTGTTATCAACTTCTA+TGG - chr6_4:84300192-84300211 Msa1000940:intron 25.0%
! AAGTTGTTATCAACTTCTAT+GGG - chr6_4:84300193-84300212 Msa1000940:intron 25.0%
!! TTCTGTTTAAGTGCTTTTAT+TGG - chr6_4:84300246-84300265 Msa1000940:CDS 25.0%
! ATTTACTTGATGAAGCTAAA+AGG - chr6_4:84300518-84300537 Msa1000940:CDS 25.0%
! AAAGGAAAATAAAATAGGCA+CGG + chr6_4:84300615-84300634 None:intergenic 25.0%
! TCACCAAAGGAAAATAAAAT+AGG + chr6_4:84300620-84300639 None:intergenic 25.0%
!!! TATTTTATTTTCCTTTGGTG+AGG - chr6_4:84300619-84300638 Msa1000940:intron 25.0%
! TTCTAGATACAACTAATGAT+TGG - chr6_4:84300689-84300708 Msa1000940:intron 25.0%
! TTAAAGCAGGAAAATGAAAA+AGG + chr6_4:84300789-84300808 None:intergenic 25.0%
! AATCAAAAGAACAAACATAG+GGG + chr6_4:84300890-84300909 None:intergenic 25.0%
! CAAATCAAAAGAACAAACAT+AGG + chr6_4:84300892-84300911 None:intergenic 25.0%
!!! TTCTTTTGATTTGTGTTTAC+AGG - chr6_4:84300899-84300918 Msa1000940:intron 25.0%
!!! ATTTAGTAGCCATTTTCTTT+GGG - chr6_4:84301058-84301077 Msa1000940:intron 25.0%
!! TTTTCAACGGTTAATTTTAG+TGG + chr6_4:84301135-84301154 None:intergenic 25.0%
!!! AAATTTTTAATTTTTCCGGG+TGG - chr6_4:84301306-84301325 Msa1000940:intron 25.0%
!!! AATTTTTAATTTTTCCGGGT+GGG - chr6_4:84301307-84301326 Msa1000940:intron 25.0%
! AAGTTATCCTATACTTCAAA+GGG + chr6_4:84301383-84301402 None:intergenic 25.0%
! AAAGTTATCCTATACTTCAA+AGG + chr6_4:84301384-84301403 None:intergenic 25.0%
!!! AGGATAACTTTTGATAACAA+TGG - chr6_4:84301393-84301412 Msa1000940:intron 25.0%
!! CACAATTTTAAATACTTGTG+CGG + chr6_4:84301492-84301511 None:intergenic 25.0%
! ATATTAGTAACAATCAGTCT+AGG - chr6_4:84301576-84301595 Msa1000940:intron 25.0%
! TTCTAACAAATACCATCATA+TGG - chr6_4:84301638-84301657 Msa1000940:intron 25.0%
!!! TTTTCTAAAGTGCAATTGAT+TGG - chr6_4:84301731-84301750 Msa1000940:intron 25.0%
! GATTGGAATTAAAAACCAAT+TGG - chr6_4:84301748-84301767 Msa1000940:intron 25.0%
!! TTTTCATTGTTCATTCCAAT+TGG + chr6_4:84301766-84301785 None:intergenic 25.0%
! TTGGAATGAACAATGAAAAT+TGG - chr6_4:84301767-84301786 Msa1000940:intron 25.0%
! TACTTCAGTATTTGTAATTG+AGG + chr6_4:84301823-84301842 None:intergenic 25.0%
! AAAGAAAAATTACGAGTCTA+AGG - chr6_4:84301904-84301923 Msa1000940:intron 25.0%
!!! TCAGATCTTTTAGTTTTGTT+GGG + chr6_4:84302064-84302083 None:intergenic 25.0%
!!! TTCAGATCTTTTAGTTTTGT+TGG + chr6_4:84302065-84302084 None:intergenic 25.0%
! CAAGTTATAATAGATATGGT+AGG + chr6_4:84302244-84302263 None:intergenic 25.0%
! CATCTATTACAATTGTGATA+TGG - chr6_4:84302370-84302389 Msa1000940:intron 25.0%
! TATATCAAGTCTTCTGTTTA+AGG + chr6_4:84302625-84302644 None:intergenic 25.0%
! ATATCATTATTAAAGTGGAC+AGG - chr6_4:84302642-84302661 Msa1000940:intron 25.0%
! AAAGTTCTATTCTAATTGTC+AGG - chr6_4:84302823-84302842 Msa1000940:intron 25.0%
! AATACAACAAGTATTCTACT+TGG + chr6_4:84302941-84302960 None:intergenic 25.0%
AGAAGAAAAATGTTAGGGTT+AGG - chr6_4:84293475-84293494 Msa1000940:three_prime_UTR 30.0%
! GAAAATGAGATAATCGATTC+AGG + chr6_4:84293510-84293529 None:intergenic 30.0%
! TGATGAAGATTGTTGAGTTT+TGG + chr6_4:84293709-84293728 None:intergenic 30.0%
AGACTTACAATAGATAAGGT+AGG + chr6_4:84293765-84293784 None:intergenic 30.0%
ATCAGTGATTCTTAACAAAC+AGG + chr6_4:84293848-84293867 None:intergenic 30.0%
TTCAGTGTAATCATAAGTGT+CGG - chr6_4:84293915-84293934 Msa1000940:intron 30.0%
CGGATTCTAATTAACGTTAA+CGG - chr6_4:84294323-84294342 Msa1000940:intron 30.0%
TTGCTTAATAATTCAGAGCT+CGG - chr6_4:84295107-84295126 Msa1000940:intron 30.0%
AGTAAACAAACTGCTTCAAA+TGG + chr6_4:84295545-84295564 None:intergenic 30.0%
!!! GATTTTGGCTAGTCTATATT+TGG - chr6_4:84295694-84295713 Msa1000940:intron 30.0%
! TTTAAGGTAAGATTTGTAGC+TGG - chr6_4:84295751-84295770 Msa1000940:intron 30.0%
GTTGAAAGTGAAACAGTTTA+TGG - chr6_4:84295892-84295911 Msa1000940:intron 30.0%
CAAGTTAGAATCAATTCTAG+CGG - chr6_4:84295988-84296007 Msa1000940:CDS 30.0%
TGAAAATCTCTTTCGAAAAC+AGG + chr6_4:84296165-84296184 None:intergenic 30.0%
!! CAGTTTACGTGTTTTGAATT+TGG - chr6_4:84296349-84296368 Msa1000940:intron 30.0%
!! CGTGTTTTGAATTTGGTTAT+AGG - chr6_4:84296356-84296375 Msa1000940:intron 30.0%
AAAACTGGCAGTGTAAAATT+CGG - chr6_4:84296495-84296514 Msa1000940:CDS 30.0%
GTAATAATGCAATGGGTATA+TGG - chr6_4:84296673-84296692 Msa1000940:intron 30.0%
TACAATCTTACAACATCATC+AGG + chr6_4:84296911-84296930 None:intergenic 30.0%
CATGAATCTATCATTTCAGA+TGG + chr6_4:84297104-84297123 None:intergenic 30.0%
AAGACAACATTAACAAATCC+TGG + chr6_4:84297140-84297159 None:intergenic 30.0%
TTCCATTAAACATGAACAGA+GGG + chr6_4:84297283-84297302 None:intergenic 30.0%
TTTCCATTAAACATGAACAG+AGG + chr6_4:84297284-84297303 None:intergenic 30.0%
!! TAAATGATGGTATTGATACC+TGG - chr6_4:84297337-84297356 Msa1000940:intron 30.0%
!! AAATGATGGTATTGATACCT+GGG - chr6_4:84297338-84297357 Msa1000940:intron 30.0%
! TGCATTTCCTTTGCTATATT+AGG + chr6_4:84297408-84297427 None:intergenic 30.0%
! TTCATATATCTCTTGGCTTT+GGG - chr6_4:84297674-84297693 Msa1000940:intron 30.0%
TTGCATTTACATTAGTTGCA+CGG - chr6_4:84297707-84297726 Msa1000940:intron 30.0%
TAATCTAATGAGATATCTGC+AGG - chr6_4:84297968-84297987 Msa1000940:CDS 30.0%
! ACTAGGAAAGTTCTCATTTT+TGG - chr6_4:84298007-84298026 Msa1000940:intron 30.0%
!!! ATGCATTTGTTTTGCAGTTT+GGG - chr6_4:84298056-84298075 Msa1000940:intron 30.0%
ACTTCTTTGTACTTAAGAAG+GGG + chr6_4:84298519-84298538 None:intergenic 30.0%
TGACATCGAAAAAACGATTT+CGG - chr6_4:84298546-84298565 Msa1000940:intron 30.0%
AAACATTGTCATATCAATGC+TGG + chr6_4:84298622-84298641 None:intergenic 30.0%
!! ATACTAAATCACTTTTCCAG+AGG + chr6_4:84298730-84298749 None:intergenic 30.0%
ATATTGAAACTGACATGAGT+TGG - chr6_4:84298755-84298774 Msa1000940:intron 30.0%
!!! CATGAGTTGGTACATTTTTT+AGG - chr6_4:84298768-84298787 Msa1000940:intron 30.0%
!! CATTCATTTTTATCTCAGAG+TGG - chr6_4:84298938-84298957 Msa1000940:intron 30.0%
!! TTCATTTTTATCTCAGAGTG+GGG - chr6_4:84298940-84298959 Msa1000940:intron 30.0%
GGTACAAAACAAATACATCA+TGG + chr6_4:84299108-84299127 None:intergenic 30.0%
TAATAAACCAATCAAACGCA+TGG + chr6_4:84299203-84299222 None:intergenic 30.0%
TACGATAAGTCTGGTTAAAT+GGG + chr6_4:84299278-84299297 None:intergenic 30.0%
ATACGATAAGTCTGGTTAAA+TGG + chr6_4:84299279-84299298 None:intergenic 30.0%
ATTATGACCGAAAGTTTGAT+TGG - chr6_4:84299297-84299316 Msa1000940:intron 30.0%
AGTTATTGGTCATGTTATGA+GGG + chr6_4:84299377-84299396 None:intergenic 30.0%
!!! GACCAATAACTGTTTTTTGT+TGG - chr6_4:84299386-84299405 Msa1000940:intron 30.0%
CTCCAACAAAAAACAGTTAT+TGG + chr6_4:84299391-84299410 None:intergenic 30.0%
TTCTATAATCCATATATCCC+CGG - chr6_4:84299673-84299692 Msa1000940:intron 30.0%
ATTGAGAAGCTGGATAAATT+AGG - chr6_4:84299700-84299719 Msa1000940:intron 30.0%
! TCTCTTTTCACAGCAATAAT+TGG + chr6_4:84299781-84299800 None:intergenic 30.0%
ATTATTGCTGTGAAAAGAGA+TGG - chr6_4:84299781-84299800 Msa1000940:CDS 30.0%
!!! TTGGTTAGTTTTCTTCTTAC+AGG - chr6_4:84299840-84299859 Msa1000940:CDS 30.0%
AGGCATACCAAAAATTTACA+GGG + chr6_4:84299884-84299903 None:intergenic 30.0%
TAGGCATACCAAAAATTTAC+AGG + chr6_4:84299885-84299904 None:intergenic 30.0%
TTATTTAGACGATACCTACA+CGG + chr6_4:84299997-84300016 None:intergenic 30.0%
! ATCTCAAGTCATGATTTTCA+TGG - chr6_4:84300091-84300110 Msa1000940:intron 30.0%
!! TTCTCCTTTGATTTTCTTTC+AGG - chr6_4:84300360-84300379 Msa1000940:intron 30.0%
TATCCAAAATGTACCCATAT+AGG - chr6_4:84300424-84300443 Msa1000940:CDS 30.0%
! AAACCTATATGGGTACATTT+TGG + chr6_4:84300430-84300449 None:intergenic 30.0%
! AAATGTACCCATATAGGTTT+TGG - chr6_4:84300430-84300449 Msa1000940:CDS 30.0%
AACAAGACCAAAACCTATAT+GGG + chr6_4:84300440-84300459 None:intergenic 30.0%
!!! GTGCCTATTTTATTTTCCTT+TGG - chr6_4:84300614-84300633 Msa1000940:intron 30.0%
!!! TGTTGATTTTGCTTTAAAGC+AGG + chr6_4:84300802-84300821 None:intergenic 30.0%
ACTACATACAAATTGAGAGT+TGG - chr6_4:84301005-84301024 Msa1000940:intron 30.0%
AAAATGGCTACTAAATCTAC+CGG + chr6_4:84301054-84301073 None:intergenic 30.0%
!! GATTTAGTAGCCATTTTCTT+TGG - chr6_4:84301057-84301076 Msa1000940:intron 30.0%
!!! TACAATTTTGTGTCGGTTTT+AGG + chr6_4:84301255-84301274 None:intergenic 30.0%
!! ATTTGTACCCTTTGAAGTAT+AGG - chr6_4:84301373-84301392 Msa1000940:intron 30.0%
CTAGGAAGTTGTACATTTAA+AGG - chr6_4:84301594-84301613 Msa1000940:intron 30.0%
GATAGCAAACCATTTATTTG+TGG - chr6_4:84301660-84301679 Msa1000940:intron 30.0%
TGAAAACAAAATCAAAGGAG+CGG + chr6_4:84301690-84301709 None:intergenic 30.0%
!!! TCCTTTGATTTTGTTTTCAG+TGG - chr6_4:84301691-84301710 Msa1000940:intron 30.0%
ACCACTGAAAACAAAATCAA+AGG + chr6_4:84301695-84301714 None:intergenic 30.0%
!! TTTTGTATTTCTGTCAAGAG+AGG - chr6_4:84301790-84301809 Msa1000940:intron 30.0%
!!! TACTGAAGTAGTTTTAGCAA+AGG - chr6_4:84301833-84301852 Msa1000940:intron 30.0%
!!! ACTGAAGTAGTTTTAGCAAA+GGG - chr6_4:84301834-84301853 Msa1000940:intron 30.0%
AAAGGGAATTAAGTGAATGA+TGG - chr6_4:84301851-84301870 Msa1000940:intron 30.0%
!!! CAGATCTTTTAGTTTTGTTG+GGG + chr6_4:84302063-84302082 None:intergenic 30.0%
TTGTTCTATCATCAGGAAAT+CGG - chr6_4:84302162-84302181 Msa1000940:intron 30.0%
AGACATTGAAGAAGTAAAGA+AGG - chr6_4:84302189-84302208 Msa1000940:intron 30.0%
ATGTTCAGATGAAATCAAGT+TGG - chr6_4:84302424-84302443 Msa1000940:intron 30.0%
TCATATACTACAATTTCCTG+AGG - chr6_4:84302543-84302562 Msa1000940:intron 30.0%
AGTCTTCTGTTTAAGGAAAA+TGG + chr6_4:84302618-84302637 None:intergenic 30.0%
!!! AATTTTTCAGGTTTTTGAGG+AGG - chr6_4:84302733-84302752 Msa1000940:intron 30.0%
CTTTGACAGCATCTTAAATA+GGG + chr6_4:84303108-84303127 None:intergenic 30.0%
ACTTTGACAGCATCTTAAAT+AGG + chr6_4:84303109-84303128 None:intergenic 30.0%
! ATGGGTTATAACTTGTAAAC+AGG + chr6_4:84303274-84303293 None:intergenic 30.0%
GTTTATTGTATTTGCATGAG+AGG - chr6_4:84303398-84303417 Msa1000940:CDS 30.0%
ATTGTTACTGGAAACTGATA+AGG - chr6_4:84303452-84303471 Msa1000940:exon 30.0%
GGTTGAAATTGAACTTTCCA+CGG + chr6_4:84293423-84293442 None:intergenic 35.0%
!!! TGAGTTTTAGAATTCAGCGA+AGG + chr6_4:84293732-84293751 None:intergenic 35.0%
CTTACAATAGATAAGGTAGG+AGG + chr6_4:84293762-84293781 None:intergenic 35.0%
ATAATCAGGGATATGAAGCA+CGG + chr6_4:84293987-84294006 None:intergenic 35.0%
!!! CATGACTGAGTTTTAGAACT+CGG + chr6_4:84294537-84294556 None:intergenic 35.0%
AAACCTACAACAGATAAGGT+AGG + chr6_4:84294564-84294583 None:intergenic 35.0%
!! TTGGATTGACTTGGTAATGT+TGG - chr6_4:84294811-84294830 Msa1000940:intron 35.0%
CTAAACTAACCCATCCAAAT+TGG + chr6_4:84294892-84294911 None:intergenic 35.0%
! GATTTAGTGTCCGTTTGTTA+CGG - chr6_4:84295060-84295079 Msa1000940:intron 35.0%
! CTCAAATGAGATGACGTTTT+TGG + chr6_4:84295281-84295300 None:intergenic 35.0%
CAAAAACGTCATCTCATTTG+AGG - chr6_4:84295279-84295298 Msa1000940:intron 35.0%
! GAATTTTACACTGCCAGTTT+TGG + chr6_4:84296496-84296515 None:intergenic 35.0%
! TTGCATTGTACATTTGCTAC+TGG - chr6_4:84296613-84296632 Msa1000940:intron 35.0%
! TGCATTGTACATTTGCTACT+GGG - chr6_4:84296614-84296633 Msa1000940:intron 35.0%
TTGGTGCAGTAATAATGCAA+TGG - chr6_4:84296665-84296684 Msa1000940:intron 35.0%
TGGTGCAGTAATAATGCAAT+GGG - chr6_4:84296666-84296685 Msa1000940:intron 35.0%
ATTATACCTGTCCAATAGCA+GGG + chr6_4:84296737-84296756 None:intergenic 35.0%
TGCTATTGGACAGGTATAAT+CGG - chr6_4:84296737-84296756 Msa1000940:intron 35.0%
TGGAGGAAGATTGTTAATGA+TGG + chr6_4:84297084-84297103 None:intergenic 35.0%
GAATCTATCATTTCAGATGG+AGG + chr6_4:84297101-84297120 None:intergenic 35.0%
ATAGATTCATGCTCTTTAGC+TGG - chr6_4:84297113-84297132 Msa1000940:CDS 35.0%
ATGTTGTCTTGTCAAAGCAT+TGG - chr6_4:84297150-84297169 Msa1000940:CDS 35.0%
GTACAAAGGATGCTAAATGA+TGG - chr6_4:84297324-84297343 Msa1000940:intron 35.0%
TTCCTCTCCTAATATAGCAA+AGG - chr6_4:84297398-84297417 Msa1000940:intron 35.0%
! TTCCTTTGCTATATTAGGAG+AGG + chr6_4:84297403-84297422 None:intergenic 35.0%
ATAGCAAAGGAAATGCATGT+TGG - chr6_4:84297411-84297430 Msa1000940:intron 35.0%
CACCTTAGATCTACCATAAT+TGG - chr6_4:84297435-84297454 Msa1000940:intron 35.0%
CTCCAATTATGGTAGATCTA+AGG + chr6_4:84297440-84297459 None:intergenic 35.0%
!! ATGAAGAAGCCTAGCTTTTA+GGG + chr6_4:84297659-84297678 None:intergenic 35.0%
!! TATGAAGAAGCCTAGCTTTT+AGG + chr6_4:84297660-84297679 None:intergenic 35.0%
AGGCTTCTTCATATATCTCT+TGG - chr6_4:84297667-84297686 Msa1000940:intron 35.0%
CTTCATATATCTCTTGGCTT+TGG - chr6_4:84297673-84297692 Msa1000940:intron 35.0%
TGCATTTACATTAGTTGCAC+GGG - chr6_4:84297708-84297727 Msa1000940:intron 35.0%
TTATCCCAGCGAAAAATCAA+TGG + chr6_4:84297951-84297970 None:intergenic 35.0%
CAAACTGCAAAACAAATGCA+TGG + chr6_4:84298057-84298076 None:intergenic 35.0%
!!! CATGCATTTGTTTTGCAGTT+TGG - chr6_4:84298055-84298074 Msa1000940:intron 35.0%
TCACTAACATCTTCTTGGTT+TGG + chr6_4:84298112-84298131 None:intergenic 35.0%
CTGTTTCACTAACATCTTCT+TGG + chr6_4:84298117-84298136 None:intergenic 35.0%
ATATTTCCAAGCAAGGGTTA+AGG + chr6_4:84298382-84298401 None:intergenic 35.0%
CAGCTTATATTTCCAAGCAA+GGG + chr6_4:84298388-84298407 None:intergenic 35.0%
ACCAATGGCATATAAACGAT+TGG - chr6_4:84298418-84298437 Msa1000940:intron 35.0%
ACCAATCGTTTATATGCCAT+TGG + chr6_4:84298422-84298441 None:intergenic 35.0%
CTTCTTTGTACTTAAGAAGG+GGG + chr6_4:84298518-84298537 None:intergenic 35.0%
ACAATGTTTATAGGTCTCTG+AGG - chr6_4:84298633-84298652 Msa1000940:intron 35.0%
CAATGTTTATAGGTCTCTGA+GGG - chr6_4:84298634-84298653 Msa1000940:intron 35.0%
AATGTTTATAGGTCTCTGAG+GGG - chr6_4:84298635-84298654 Msa1000940:intron 35.0%
! TCTATAAGGCATCTAAAGTG+AGG - chr6_4:84298794-84298813 Msa1000940:CDS 35.0%
!!! GTATTTGTTTTGTACCTTCC+TGG - chr6_4:84299112-84299131 Msa1000940:intron 35.0%
GGTACAAAACAAAGACATCA+TGG + chr6_4:84299150-84299169 None:intergenic 35.0%
TTTAGTACCATGCGTTTGAT+TGG - chr6_4:84299193-84299212 Msa1000940:intron 35.0%
ACGGAAACCAATCAAACTTT+CGG + chr6_4:84299307-84299326 None:intergenic 35.0%
GAGTTCCTGAGACTAATTTA+CGG + chr6_4:84299326-84299345 None:intergenic 35.0%
TTATTGGTCATGTTATGAGG+GGG + chr6_4:84299375-84299394 None:intergenic 35.0%
GTTATTGGTCATGTTATGAG+GGG + chr6_4:84299376-84299395 None:intergenic 35.0%
CAGTTATTGGTCATGTTATG+AGG + chr6_4:84299378-84299397 None:intergenic 35.0%
TGAATGATATGTTTGACCAC+AGG - chr6_4:84299642-84299661 Msa1000940:intron 35.0%
GAATGATATGTTTGACCACA+GGG - chr6_4:84299643-84299662 Msa1000940:intron 35.0%
TCTATAATCCATATATCCCC+GGG - chr6_4:84299674-84299693 Msa1000940:intron 35.0%
GAAGCTGGATAAATTAGGAT+TGG - chr6_4:84299705-84299724 Msa1000940:intron 35.0%
ACAGGGTAAAGCAAGTAAAA+AGG + chr6_4:84300156-84300175 None:intergenic 35.0%
ATATTAGCAGTAGCACTAGT+CGG + chr6_4:84300317-84300336 None:intergenic 35.0%
AAGGCCTGAAAGAAAATCAA+AGG + chr6_4:84300367-84300386 None:intergenic 35.0%
! TGATTTTCTTTCAGGCCTTT+AGG - chr6_4:84300368-84300387 Msa1000940:intron 35.0%
GAACAAGACCAAAACCTATA+TGG + chr6_4:84300441-84300460 None:intergenic 35.0%
!!! ATAGGTTTTGGTCTTGTTCT+TGG - chr6_4:84300442-84300461 Msa1000940:CDS 35.0%
!!! TAGGTTTTGGTCTTGTTCTT+GGG - chr6_4:84300443-84300462 Msa1000940:CDS 35.0%
TACATTACCACGTTCAAGAA+GGG + chr6_4:84300557-84300576 None:intergenic 35.0%
!! AGGTTTTAGTGTCTAGACAT+CGG - chr6_4:84300639-84300658 Msa1000940:intron 35.0%
!! TACAACTAATGATTGGTCTG+AGG - chr6_4:84300696-84300715 Msa1000940:intron 35.0%
GCAAAATCAACATCCTGTAA+TGG - chr6_4:84300810-84300829 Msa1000940:intron 35.0%
ATTGTGAAGACTTCCATTAC+AGG + chr6_4:84300826-84300845 None:intergenic 35.0%
GCAATTTCTAAATGACTCCT+AGG - chr6_4:84300856-84300875 Msa1000940:intron 35.0%
TGATCAGATGCTTAGTGATA+AGG - chr6_4:84300969-84300988 Msa1000940:intron 35.0%
AGATGCTTAGTGATAAGGTA+AGG - chr6_4:84300974-84300993 Msa1000940:intron 35.0%
TGAACTTACAGTAAAGAAGC+CGG - chr6_4:84301032-84301051 Msa1000940:intron 35.0%
GGAGCCAGAAAAAAAAGTTT+GGG - chr6_4:84301105-84301124 Msa1000940:intron 35.0%
!!! CCTACCCAAACTTTTTTTTC+TGG + chr6_4:84301112-84301131 None:intergenic 35.0%
CCAGAAAAAAAAGTTTGGGT+AGG - chr6_4:84301109-84301128 Msa1000940:intron 35.0%
TACACCACTTTGTAGGAATT+TGG - chr6_4:84301218-84301237 Msa1000940:intron 35.0%
TGATCCAAATTCCTACAAAG+TGG + chr6_4:84301225-84301244 None:intergenic 35.0%
! AAGGGTACAAATATAGTCAG+TGG + chr6_4:84301365-84301384 None:intergenic 35.0%
!! ATGGTTTGCTATCCATATGA+TGG + chr6_4:84301653-84301672 None:intergenic 35.0%
! AGCGGATTTCCACAAATAAA+TGG + chr6_4:84301672-84301691 None:intergenic 35.0%
ATGAGCAATTTAGCTGAGTA+AGG + chr6_4:84301956-84301975 None:intergenic 35.0%
TCCAAACAGCTTAGAAGATT+TGG - chr6_4:84301998-84302017 Msa1000940:intron 35.0%
ACCAAATCTTCTAAGCTGTT+TGG + chr6_4:84302002-84302021 None:intergenic 35.0%
! TTTTGTTGGGGATGAAGAAA+GGG + chr6_4:84302051-84302070 None:intergenic 35.0%
ACCTTCCTTTATTGTGTAAC+AGG - chr6_4:84302099-84302118 Msa1000940:intron 35.0%
CCTTCCTTTATTGTGTAACA+GGG - chr6_4:84302100-84302119 Msa1000940:intron 35.0%
CTTCCTTTATTGTGTAACAG+GGG - chr6_4:84302101-84302120 Msa1000940:intron 35.0%
ATTCCCCTGTTACACAATAA+AGG + chr6_4:84302107-84302126 None:intergenic 35.0%
! CTAGGATTTGTTCTATCATC+AGG - chr6_4:84302155-84302174 Msa1000940:intron 35.0%
TGTTCTATCATCAGGAAATC+GGG - chr6_4:84302163-84302182 Msa1000940:intron 35.0%
ATATGGTAGGTCATCAAATC+AGG + chr6_4:84302231-84302250 None:intergenic 35.0%
AACCTTGTAGGATCTAAACT+AGG + chr6_4:84302324-84302343 None:intergenic 35.0%
! ACAGAATGGGGTTATTGTTT+TGG - chr6_4:84302492-84302511 Msa1000940:intron 35.0%
TCATGAATCTGAGCGTTTAT+TGG - chr6_4:84302516-84302535 Msa1000940:intron 35.0%
CATGAATCTGAGCGTTTATT+GGG - chr6_4:84302517-84302536 Msa1000940:intron 35.0%
ATGAATCTGAGCGTTTATTG+GGG - chr6_4:84302518-84302537 Msa1000940:intron 35.0%
ATACTACAATTTCCTGAGGT+AGG - chr6_4:84302547-84302566 Msa1000940:intron 35.0%
!!! TATGAGCGAGAGTATCTTTT+TGG + chr6_4:84302692-84302711 None:intergenic 35.0%
TTTCGTAAAGATTTCTGCCA+AGG + chr6_4:84302804-84302823 None:intergenic 35.0%
! AAAAGTCTACTAGTTTCCTC+AGG + chr6_4:84303193-84303212 None:intergenic 35.0%
!!! AGAAAGTGCTTTTATCTCCT+TGG - chr6_4:84303241-84303260 Msa1000940:CDS 35.0%
TGTAAACAGGTTCAATTCCA+AGG + chr6_4:84303261-84303280 None:intergenic 35.0%
ACAAGTTATAACCCATCTGA+AGG - chr6_4:84303278-84303297 Msa1000940:intron 35.0%
TCATTTGAACTCCTTCAGAT+GGG + chr6_4:84303292-84303311 None:intergenic 35.0%
TTCATTTGAACTCCTTCAGA+TGG + chr6_4:84303293-84303312 None:intergenic 35.0%
! CCAAATCTTGTCATTTCACT+TGG + chr6_4:84303534-84303553 None:intergenic 35.0%
CCAAGTGAAATGACAAGATT+TGG - chr6_4:84303531-84303550 Msa1000940:five_prime_UTR 35.0%
! GGACGTTATGTGGATTTTAA+TGG - chr6_4:84303552-84303571 Msa1000940:five_prime_UTR 35.0%
!! AGTGTAATCATAAGTGTCGG+AGG - chr6_4:84293918-84293937 Msa1000940:intron 40.0%
GAGTTGAATTGATTAAGCGC+CGG - chr6_4:84294161-84294180 Msa1000940:CDS 40.0%
ACTCCTACCTTATCTGTTGT+AGG - chr6_4:84294558-84294577 Msa1000940:intron 40.0%
!! TTGACTTGGTAATGTTGGCT+TGG - chr6_4:84294816-84294835 Msa1000940:intron 40.0%
!! TGACTTGGTAATGTTGGCTT+GGG - chr6_4:84294817-84294836 Msa1000940:intron 40.0%
! GCAGCTTTGTGTTTGTTTAC+CGG - chr6_4:84295197-84295216 Msa1000940:intron 40.0%
! AACTGTCTTTTCACACTAGC+AGG + chr6_4:84296393-84296412 None:intergenic 40.0%
AAAGACAATTGTGCCAGATG+AGG - chr6_4:84296437-84296456 Msa1000940:CDS 40.0%
!! TTTTACACTGCCAGTTTTGG+CGG + chr6_4:84296493-84296512 None:intergenic 40.0%
AAGCTCAAAGGAAAGGAAAC+TGG - chr6_4:84296699-84296718 Msa1000940:intron 40.0%
GGAAAGGAAACTGGATTCAA+AGG - chr6_4:84296708-84296727 Msa1000940:intron 40.0%
TTATACCTGTCCAATAGCAG+GGG + chr6_4:84296736-84296755 None:intergenic 40.0%
GATTATACCTGTCCAATAGC+AGG + chr6_4:84296738-84296757 None:intergenic 40.0%
! TGCAATTACATATGGGTTGC+AGG + chr6_4:84296781-84296800 None:intergenic 40.0%
AGCCCTCTGTTCATGTTTAA+TGG - chr6_4:84297278-84297297 Msa1000940:intron 40.0%
GGCTAATGTGTCTCCAATTA+TGG + chr6_4:84297451-84297470 None:intergenic 40.0%
ACGTGAAAATTCAAGCATGC+GGG + chr6_4:84297472-84297491 None:intergenic 40.0%
CACGTGAAAATTCAAGCATG+CGG + chr6_4:84297473-84297492 None:intergenic 40.0%
! CATGCTTGAATTTTCACGTG+TGG - chr6_4:84297473-84297492 Msa1000940:intron 40.0%
AGTCACCAACATGATTTCGA+CGG + chr6_4:84297509-84297528 None:intergenic 40.0%
!! TCGAAATCATGTTGGTGACT+GGG - chr6_4:84297509-84297528 Msa1000940:intron 40.0%
TGCTATACACCCTAAAAGCT+AGG - chr6_4:84297647-84297666 Msa1000940:intron 40.0%
AACTAATTACGCAGGGATAG+TGG - chr6_4:84297731-84297750 Msa1000940:intron 40.0%
!!! AATGGCCATTGATTTTTCGC+TGG - chr6_4:84297943-84297962 Msa1000940:CDS 40.0%
!!! ATGGCCATTGATTTTTCGCT+GGG - chr6_4:84297944-84297963 Msa1000940:CDS 40.0%
GATGTTAGTGAAACAGCCAT+CGG - chr6_4:84298121-84298140 Msa1000940:CDS 40.0%
GTATCATAGCACATCACTTC+TGG + chr6_4:84298352-84298371 None:intergenic 40.0%
TGATGTGCTATGATACCCTT+AGG - chr6_4:84298356-84298375 Msa1000940:intron 40.0%
GCAGCTTATATTTCCAAGCA+AGG + chr6_4:84298389-84298408 None:intergenic 40.0%
CATTGTCATATCAATGCTGG+AGG + chr6_4:84298619-84298638 None:intergenic 40.0%
ATGATCCCGAATTTAAGCTG+AGG - chr6_4:84298824-84298843 Msa1000940:CDS 40.0%
TGATCCCGAATTTAAGCTGA+GGG - chr6_4:84298825-84298844 Msa1000940:CDS 40.0%
TTGTGCCCTCAGCTTAAATT+CGG + chr6_4:84298833-84298852 None:intergenic 40.0%
TTCAACTGGAGGAAATGGTA+AGG - chr6_4:84299044-84299063 Msa1000940:intron 40.0%
TCAACTGGAGGAAATGGTAA+GGG - chr6_4:84299045-84299064 Msa1000940:intron 40.0%
!!! TTTGTTTTGTACCTTCCTGG+AGG - chr6_4:84299115-84299134 Msa1000940:intron 40.0%
TCATGGATAGAAATTCCTCC+AGG + chr6_4:84299133-84299152 None:intergenic 40.0%
!!! GTCTTTGTTTTGTACCTTCC+TGG - chr6_4:84299154-84299173 Msa1000940:intron 40.0%
!!! TTTGTTTTGTACCTTCCTGG+AGG - chr6_4:84299115-84299134 Msa1000940:intron 40.0%
AAACAGTTACCATTTCCTCC+AGG + chr6_4:84299175-84299194 None:intergenic 40.0%
CGGTCATAATACGATAAGTC+TGG + chr6_4:84299287-84299306 None:intergenic 40.0%
! GGTTTCCGTAAATTAGTCTC+AGG - chr6_4:84299318-84299337 Msa1000940:intron 40.0%
TATTGGTCATGTTATGAGGG+GGG + chr6_4:84299374-84299393 None:intergenic 40.0%
! CAAACGCTGTAAAGCATTAG+TGG + chr6_4:84299463-84299482 None:intergenic 40.0%
CTATAATCCATATATCCCCG+GGG - chr6_4:84299675-84299694 Msa1000940:intron 40.0%
GCTGGATAAATTAGGATTGG+TGG - chr6_4:84299708-84299727 Msa1000940:intron 40.0%
TGCTCGTGTGATATATGTTG+AGG - chr6_4:84299744-84299763 Msa1000940:intron 40.0%
GCTCGTGTGATATATGTTGA+GGG - chr6_4:84299745-84299764 Msa1000940:intron 40.0%
ATTGCTGTGAAAAGAGATGG+TGG - chr6_4:84299784-84299803 Msa1000940:CDS 40.0%
ATCAAGGACAAGTCACTACA+GGG + chr6_4:84300173-84300192 None:intergenic 40.0%
TATCAAGGACAAGTCACTAC+AGG + chr6_4:84300174-84300193 None:intergenic 40.0%
! GGAATGACGGAAAACGATTT+AGG - chr6_4:84300464-84300483 Msa1000940:CDS 40.0%
ACGGAAAACGATTTAGGAGT+CGG - chr6_4:84300470-84300489 Msa1000940:CDS 40.0%
GTACATTACCACGTTCAAGA+AGG + chr6_4:84300558-84300577 None:intergenic 40.0%
AGACACTAAAACCTCACCAA+AGG + chr6_4:84300633-84300652 None:intergenic 40.0%
TTAGTGTCTAGACATCGGAA+AGG - chr6_4:84300644-84300663 Msa1000940:intron 40.0%
!! AACTAATGATTGGTCTGAGG+AGG - chr6_4:84300699-84300718 Msa1000940:intron 40.0%
GGAGATTGAGAAAACATCAG+AGG - chr6_4:84300720-84300739 Msa1000940:intron 40.0%
GAGAAAACATCAGAGGCAAT+TGG - chr6_4:84300727-84300746 Msa1000940:intron 40.0%
ACATCAGAGGCAATTGGTTA+CGG - chr6_4:84300733-84300752 Msa1000940:intron 40.0%
TGCTTAGTGATAAGGTAAGG+TGG - chr6_4:84300977-84300996 Msa1000940:intron 40.0%
CGGAGCCAGAAAAAAAAGTT+TGG - chr6_4:84301104-84301123 Msa1000940:intron 40.0%
ATTCCTACAAAGTGGTGTAG+TGG + chr6_4:84301217-84301236 None:intergenic 40.0%
GGTACAAATATAGTCAGTGG+CGG + chr6_4:84301362-84301381 None:intergenic 40.0%
TAATGAGTGAGCACTAACCT+AGG - chr6_4:84301535-84301554 Msa1000940:intron 40.0%
CCTAGAGTATACAACTTCCT+AGG + chr6_4:84301555-84301574 None:intergenic 40.0%
CCTAGGAAGTTGTATACTCT+AGG - chr6_4:84301552-84301571 Msa1000940:intron 40.0%
AAGGGTTCATCAATTGCTAC+AGG + chr6_4:84302033-84302052 None:intergenic 40.0%
!! GTTTTGTTGGGGATGAAGAA+AGG + chr6_4:84302052-84302071 None:intergenic 40.0%
CCCTGTTACACAATAAAGGA+AGG + chr6_4:84302103-84302122 None:intergenic 40.0%
ATTTGCTCTATGCACATGCT+AGG - chr6_4:84302137-84302156 Msa1000940:intron 40.0%
TGCCTAGTTTAGATCCTACA+AGG - chr6_4:84302319-84302338 Msa1000940:intron 40.0%
TCGTATCGAATCAACCTTGT+AGG + chr6_4:84302336-84302355 None:intergenic 40.0%
TCATCTTTGTTGCGACAGAA+TGG - chr6_4:84302478-84302497 Msa1000940:intron 40.0%
CATCTTTGTTGCGACAGAAT+GGG - chr6_4:84302479-84302498 Msa1000940:intron 40.0%
ATCTTTGTTGCGACAGAATG+GGG - chr6_4:84302480-84302499 Msa1000940:intron 40.0%
CTATTCATGTATCCTACCTC+AGG + chr6_4:84302562-84302581 None:intergenic 40.0%
AGATACTCTCGCTCATATAC+AGG - chr6_4:84302695-84302714 Msa1000940:intron 40.0%
AGGTAATCACACAGCACATT+AGG + chr6_4:84302776-84302795 None:intergenic 40.0%
GTGTGATTACCTCTATACCT+TGG - chr6_4:84302784-84302803 Msa1000940:intron 40.0%
AGATTTCTGCCAAGGTATAG+AGG + chr6_4:84302796-84302815 None:intergenic 40.0%
TTAATGCAAACCTCGTCACT+GGG + chr6_4:84302914-84302933 None:intergenic 40.0%
! TTTTGTCAAGTACGTGCTGA+TGG - chr6_4:84303013-84303032 Msa1000940:intron 40.0%
! TTTGTCAAGTACGTGCTGAT+GGG - chr6_4:84303014-84303033 Msa1000940:intron 40.0%
GGGAAGGAAGTTGAATCAAA+AGG + chr6_4:84303150-84303169 None:intergenic 40.0%
TGATTCAACTTCCTTCCCTT+TGG - chr6_4:84303152-84303171 Msa1000940:intron 40.0%
! ATTTGCATGAGAGGTGTAAG+AGG - chr6_4:84303407-84303426 Msa1000940:CDS 40.0%
! TTTGCATGAGAGGTGTAAGA+GGG - chr6_4:84303408-84303427 Msa1000940:CDS 40.0%
GACAAGATTTGGACGTTATG+TGG - chr6_4:84303542-84303561 Msa1000940:five_prime_UTR 40.0%
CACGGTTGTGAAGAAGAAGA+AGG + chr6_4:84293405-84293424 None:intergenic 45.0%
CTTCTTCTTCTTCACAACCG+TGG - chr6_4:84293403-84293422 Msa1000940:three_prime_UTR 45.0%
GAACGTGAAGGTTGAAGAGA+AGG + chr6_4:84293541-84293560 None:intergenic 45.0%
TCTCTTCAACCTTCACGTTC+TGG - chr6_4:84293541-84293560 Msa1000940:three_prime_UTR 45.0%
TAACCCATCCAAATTGGCAC+CGG + chr6_4:84294886-84294905 None:intergenic 45.0%
!!! AGTTTTGGTTCCTCCAAACG+TGG - chr6_4:84296053-84296072 Msa1000940:intron 45.0%
GCGGTGCAAACATCAACTAA+GGG + chr6_4:84296474-84296493 None:intergenic 45.0%
GGTATATGGTCGAAGCTCAA+AGG - chr6_4:84296687-84296706 Msa1000940:intron 45.0%
ATGGTCGAAGCTCAAAGGAA+AGG - chr6_4:84296692-84296711 Msa1000940:intron 45.0%
TATACCTGTCCAATAGCAGG+GGG + chr6_4:84296735-84296754 None:intergenic 45.0%
!! GTCAAAGCATTGGATAGCTC+AGG - chr6_4:84297160-84297179 Msa1000940:CDS 45.0%
GTTACCCGTCGAAATCATGT+TGG - chr6_4:84297501-84297520 Msa1000940:intron 45.0%
GTCACCAACATGATTTCGAC+GGG + chr6_4:84297508-84297527 None:intergenic 45.0%
!! GTCGAAATCATGTTGGTGAC+TGG - chr6_4:84297508-84297527 Msa1000940:intron 45.0%
!! CGAAATCATGTTGGTGACTG+GGG - chr6_4:84297510-84297529 Msa1000940:intron 45.0%
TTTATGCCAATTATCGGGGC+TGG - chr6_4:84297619-84297638 Msa1000940:intron 45.0%
AAAGATCCAGCCCCGATAAT+TGG + chr6_4:84297628-84297647 None:intergenic 45.0%
TGCATGGACTTTGAGCTCTA+TGG + chr6_4:84298041-84298060 None:intergenic 45.0%
CACATCACTTCTGGATAGCT+TGG + chr6_4:84298343-84298362 None:intergenic 45.0%
AAGCAAGGGTTAAGGCCTAA+GGG + chr6_4:84298374-84298393 None:intergenic 45.0%
AGCTGCTATCACATGACCAA+TGG - chr6_4:84298403-84298422 Msa1000940:intron 45.0%
TGTGCCCTCAGCTTAAATTC+GGG + chr6_4:84298832-84298851 None:intergenic 45.0%
! ATTTAAGCTGAGGGCACAAC+AGG - chr6_4:84298834-84298853 Msa1000940:CDS 45.0%
TTCCCGATATCCCATGAGTA+GGG + chr6_4:84298895-84298914 None:intergenic 45.0%
TTTCCCGATATCCCATGAGT+AGG + chr6_4:84298896-84298915 None:intergenic 45.0%
TAGTAGGGCTGAGTTTGACA+AGG - chr6_4:84299003-84299022 Msa1000940:intron 45.0%
GACAAGGTCTATCAACGTCT+TGG - chr6_4:84299019-84299038 Msa1000940:intron 45.0%
TCAACGTCTTGGAGTTCAAC+TGG - chr6_4:84299030-84299049 Msa1000940:intron 45.0%
TGGAGTTCAACTGGAGGAAA+TGG - chr6_4:84299039-84299058 Msa1000940:intron 45.0%
GGATAGAAATTCCTCCAGGA+AGG + chr6_4:84299129-84299148 None:intergenic 45.0%
TTGTACCTTCCTGGAGGAAA+TGG - chr6_4:84299163-84299182 Msa1000940:intron 45.0%
AGTTACCATTTCCTCCAGGA+AGG + chr6_4:84299171-84299190 None:intergenic 45.0%
ATTGGTCATGTTATGAGGGG+GGG + chr6_4:84299373-84299392 None:intergenic 45.0%
TTATAGAAGCTCTCTCCCTG+TGG + chr6_4:84299661-84299680 None:intergenic 45.0%
TCAATAACCCCGGGGATATA+TGG + chr6_4:84299685-84299704 None:intergenic 45.0%
ATCCAGCTTCTCAATAACCC+CGG + chr6_4:84299695-84299714 None:intergenic 45.0%
! GGATTGGTGGAAGATAGTGA+TGG - chr6_4:84299721-84299740 Msa1000940:intron 45.0%
TAACCAAAGCGATGCGAGAT+CGG + chr6_4:84299827-84299846 None:intergenic 45.0%
CTGAGCTATTTGAACCGTGT+AGG - chr6_4:84299980-84299999 Msa1000940:intron 45.0%
!! GGTCTTGTTCTTGGGAATGA+CGG - chr6_4:84300451-84300470 Msa1000940:CDS 45.0%
AAAACTGCCCTTCTTGAACG+TGG - chr6_4:84300547-84300566 Msa1000940:CDS 45.0%
CATCAGAGGCAATTGGTTAC+GGG - chr6_4:84300734-84300753 Msa1000940:intron 45.0%
ATCAGAGGCAATTGGTTACG+GGG - chr6_4:84300735-84300754 Msa1000940:intron 45.0%
ACATAGGGGACTATAAGCCT+AGG + chr6_4:84300876-84300895 None:intergenic 45.0%
! CCACTGAATATAGTGGGACA+GGG + chr6_4:84301084-84301103 None:intergenic 45.0%
TGTCCCACTATATTCAGTGG+CGG - chr6_4:84301084-84301103 Msa1000940:intron 45.0%
CTGTCGCAACAAAGATGACA+GGG + chr6_4:84302476-84302495 None:intergenic 45.0%
TCTGTCGCAACAAAGATGAC+AGG + chr6_4:84302477-84302496 None:intergenic 45.0%
ATTCCTATTTCCCAGTGACG+AGG - chr6_4:84302901-84302920 Msa1000940:intron 45.0%
AAACCTCGTCACTGGGAAAT+AGG + chr6_4:84302907-84302926 None:intergenic 45.0%
CTTAATGCAAACCTCGTCAC+TGG + chr6_4:84302915-84302934 None:intergenic 45.0%
!! AACTAAAATATTATATTTAA+GGG + chr6_4:84297883-84297902 None:intergenic 5.0%
!! TAACTAAAATATTATATTTA+AGG + chr6_4:84297884-84297903 None:intergenic 5.0%
!!! TTAATCATATATTATTTTAT+TGG - chr6_4:84298201-84298220 Msa1000940:intron 5.0%
!! AATTTAAATAATTCAATTAT+AGG + chr6_4:84301183-84301202 None:intergenic 5.0%
!!! ATTGAATTATTTAAATTTTT+CGG - chr6_4:84301186-84301205 Msa1000940:intron 5.0%
CGTGAAGGTTGAAGAGAAGG+TGG + chr6_4:84293538-84293557 None:intergenic 50.0%
AGAAGCTGACCAGAACGTGA+AGG + chr6_4:84293553-84293572 None:intergenic 50.0%
TATGAAGCACGGACACTCCT+CGG + chr6_4:84293976-84293995 None:intergenic 50.0%
!! GTAATGTTGGCTTGGGACCT+TGG - chr6_4:84294824-84294843 Msa1000940:intron 50.0%
TTGAGGAGGAGGATACTCCA+AGG + chr6_4:84294844-84294863 None:intergenic 50.0%
! TTGGAGTATCCTCCTCCTCA+AGG - chr6_4:84294843-84294862 Msa1000940:intron 50.0%
GAATCGAACCTGAGACCTTG+AGG + chr6_4:84294861-84294880 None:intergenic 50.0%
AACCCATCCAAATTGGCACC+GGG + chr6_4:84294885-84294904 None:intergenic 50.0%
GTGTTTGCTTCCACGTTTGG+AGG + chr6_4:84296066-84296085 None:intergenic 50.0%
! GGAGTGTTTGCTTCCACGTT+TGG + chr6_4:84296069-84296088 None:intergenic 50.0%
GGCACAACATCTTCCTCATC+TGG + chr6_4:84296453-84296472 None:intergenic 50.0%
GGCGGTGCAAACATCAACTA+AGG + chr6_4:84296475-84296494 None:intergenic 50.0%
GATGTTTGCACCGCCAAAAC+TGG - chr6_4:84296480-84296499 Msa1000940:CDS 50.0%
! CATTTGCTACTGGGCATGTG+TGG - chr6_4:84296623-84296642 Msa1000940:intron 50.0%
TTCAAAGGTCCCCCTGCTAT+TGG - chr6_4:84296723-84296742 Msa1000940:intron 50.0%
TCATGCTCTTTAGCTGGTCC+AGG - chr6_4:84297119-84297138 Msa1000940:CDS 50.0%
TCCTACTGCAGAGCGTACAA+AGG - chr6_4:84297310-84297329 Msa1000940:intron 50.0%
TCCTTTGTACGCTCTGCAGT+AGG + chr6_4:84297314-84297333 None:intergenic 50.0%
ACCTCGACTTCCAATCAGGA+GGG - chr6_4:84297362-84297381 Msa1000940:intron 50.0%
ACTTCCAATCAGGAGGGCTA+TGG - chr6_4:84297368-84297387 Msa1000940:intron 50.0%
TCAACCATAGCCCTCCTGAT+TGG + chr6_4:84297375-84297394 None:intergenic 50.0%
TGCACGGGAACTAATTACGC+AGG - chr6_4:84297723-84297742 Msa1000940:intron 50.0%
GCACGGGAACTAATTACGCA+GGG - chr6_4:84297724-84297743 Msa1000940:intron 50.0%
AACAGCCATCGGAGATCTTC+AGG - chr6_4:84298132-84298151 Msa1000940:CDS 50.0%
TCTCACCTGAAGATCTCCGA+TGG + chr6_4:84298140-84298159 None:intergenic 50.0%
CTAGAGTGAGCATGAGCATG+TGG + chr6_4:84298273-84298292 None:intergenic 50.0%
CAAGCAAGGGTTAAGGCCTA+AGG + chr6_4:84298375-84298394 None:intergenic 50.0%
CTTAGGCCTTAACCCTTGCT+TGG - chr6_4:84298373-84298392 Msa1000940:intron 50.0%
CATGAGTAGGGGCTAAACTC+GGG + chr6_4:84298883-84298902 None:intergenic 50.0%
CCATGAGTAGGGGCTAAACT+CGG + chr6_4:84298884-84298903 None:intergenic 50.0%
CGAGTTTAGCCCCTACTCAT+GGG - chr6_4:84298882-84298901 Msa1000940:intron 50.0%
AGCCCCTACTCATGGGATAT+CGG - chr6_4:84298889-84298908 Msa1000940:intron 50.0%
TCCCGATATCCCATGAGTAG+GGG + chr6_4:84298894-84298913 None:intergenic 50.0%
TATCTCAGAGTGGGGATACC+AGG - chr6_4:84298948-84298967 Msa1000940:intron 50.0%
! ATACCAGGTATCGCAAGGCA+TGG - chr6_4:84298963-84298982 Msa1000940:intron 50.0%
ACGTCTTGGAGTTCAACTGG+AGG - chr6_4:84299033-84299052 Msa1000940:intron 50.0%
TTGGTCATGTTATGAGGGGG+GGG + chr6_4:84299372-84299391 None:intergenic 50.0%
TCCAGCTTCTCAATAACCCC+GGG + chr6_4:84299694-84299713 None:intergenic 50.0%
ATTTAGGAGTCGGAGCAGTG+AGG - chr6_4:84300480-84300499 Msa1000940:CDS 50.0%
GAGCAGTGAGGTTGTTCGTT+TGG - chr6_4:84300492-84300511 Msa1000940:CDS 50.0%
CCCTGTCCCACTATATTCAG+TGG - chr6_4:84301081-84301100 Msa1000940:intron 50.0%
! GCCACTGAATATAGTGGGAC+AGG + chr6_4:84301085-84301104 None:intergenic 50.0%
GCTCCGCCACTGAATATAGT+GGG + chr6_4:84301090-84301109 None:intergenic 50.0%
TCAACTTCCTTCCCTTTGGC+AGG - chr6_4:84303156-84303175 Msa1000940:intron 50.0%
CGATCCTACAACCTGCCAAA+GGG + chr6_4:84303170-84303189 None:intergenic 50.0%
GATAAGGCTTGTCCCGGTGT+CGG + chr6_4:84293954-84293973 None:intergenic 55.0%
TCCTCGGATAAGGCTTGTCC+CGG + chr6_4:84293960-84293979 None:intergenic 55.0%
ATCCTCCTCCTCAAGGTCTC+AGG - chr6_4:84294850-84294869 Msa1000940:intron 55.0%
AACCTGAGACCTTGAGGAGG+AGG + chr6_4:84294855-84294874 None:intergenic 55.0%
TCGAACCTGAGACCTTGAGG+AGG + chr6_4:84294858-84294877 None:intergenic 55.0%
GGTCTCAGGTTCGATTCTCC+CGG - chr6_4:84294864-84294883 Msa1000940:intron 55.0%
! CGATTCTCCCGGTGCCAATT+TGG - chr6_4:84294875-84294894 Msa1000940:intron 55.0%
! TCTCCCGGTGCCAATTTGGA+TGG - chr6_4:84294879-84294898 Msa1000940:intron 55.0%
! CTCCCGGTGCCAATTTGGAT+GGG - chr6_4:84294880-84294899 Msa1000940:intron 55.0%
TGCTACTGGGCATGTGTGGA+AGG - chr6_4:84296627-84296646 Msa1000940:intron 55.0%
CACCTCGACTTCCAATCAGG+AGG - chr6_4:84297361-84297380 Msa1000940:intron 55.0%
GGCTAAACTCGGGCTATACC+TGG + chr6_4:84298873-84298892 None:intergenic 55.0%
CCGAGTTTAGCCCCTACTCA+TGG - chr6_4:84298881-84298900 Msa1000940:intron 55.0%
GCCCCTACTCATGGGATATC+GGG - chr6_4:84298890-84298909 Msa1000940:intron 55.0%
! TGGGGATACCAGGTATCGCA+AGG - chr6_4:84298958-84298977 Msa1000940:intron 55.0%
TTGCCATGCCTTGCGATACC+TGG + chr6_4:84298969-84298988 None:intergenic 55.0%
CCAGCTTCTCAATAACCCCG+GGG + chr6_4:84299693-84299712 None:intergenic 55.0%
CAACCGATCTCGCATCGCTT+TGG - chr6_4:84299821-84299840 Msa1000940:CDS 55.0%
TTTCAGGCCTTTAGGCGTGC+AGG - chr6_4:84300376-84300395 Msa1000940:intron 55.0%
AAGCCAACCTGCACGCCTAA+AGG + chr6_4:84300386-84300405 None:intergenic 55.0%
GGATACGCGTTCTCATTCCG+TGG + chr6_4:84300409-84300428 None:intergenic 55.0%
GGGACAGGGCCCAAAGAAAA+TGG + chr6_4:84301070-84301089 None:intergenic 55.0%
GGCTCCGCCACTGAATATAG+TGG + chr6_4:84301091-84301110 None:intergenic 55.0%
GGGCCACTACACCACTTTGT+AGG - chr6_4:84301211-84301230 Msa1000940:intron 55.0%
! TAATTTTTCCGGGTGGGCCG+TGG - chr6_4:84301313-84301332 Msa1000940:intron 55.0%
AACGACTCTCTCTCAGCAGG+GGG + chr6_4:84301933-84301952 None:intergenic 55.0%
GAACGACTCTCTCTCAGCAG+GGG + chr6_4:84301934-84301953 None:intergenic 55.0%
GGAACGACTCTCTCTCAGCA+GGG + chr6_4:84301935-84301954 None:intergenic 55.0%
AGGAACGACTCTCTCTCAGC+AGG + chr6_4:84301936-84301955 None:intergenic 55.0%
CCTACAACCTGCCAAAGGGA+AGG + chr6_4:84303166-84303185 None:intergenic 55.0%
CCTTCCCTTTGGCAGGTTGT+AGG - chr6_4:84303163-84303182 Msa1000940:intron 55.0%
GCGATCCTACAACCTGCCAA+AGG + chr6_4:84303171-84303190 None:intergenic 55.0%
! ACCGGGACAAGCCTTATCCG+AGG - chr6_4:84293956-84293975 Msa1000940:intron 60.0%
GCACGGACACTCCTCGGATA+AGG + chr6_4:84293970-84293989 None:intergenic 60.0%
AGGTCCCCCTGCTATTGGAC+AGG - chr6_4:84296728-84296747 Msa1000940:intron 60.0%
! GATTGGAAGTCGAGGTGCCC+AGG + chr6_4:84297358-84297377 None:intergenic 60.0%
GGGCACCTCGACTTCCAATC+AGG - chr6_4:84297358-84297377 Msa1000940:intron 60.0%
GCCCTCCTGATTGGAAGTCG+AGG + chr6_4:84297366-84297385 None:intergenic 60.0%
!! TGTTGGTGACTGGGGAACGC+AGG - chr6_4:84297518-84297537 Msa1000940:intron 60.0%
!! GGGGGAGAGAGCACTGTCTT+AGG + chr6_4:84297863-84297882 None:intergenic 60.0%
! ACAGGCAGTGGTTCTGCTCC+AGG - chr6_4:84298852-84298871 Msa1000940:CDS 60.0%
CCCCGGGGTTATTGAGAAGC+TGG - chr6_4:84299690-84299709 Msa1000940:intron 60.0%
AGGCCTTTAGGCGTGCAGGT+TGG - chr6_4:84300380-84300399 Msa1000940:intron 60.0%
GCAGGTTGTAGGATCGCCTG+AGG - chr6_4:84303174-84303193 Msa1000940:CDS 60.0%
AGGCGACACGTGTCCGACAC+CGG - chr6_4:84293938-84293957 Msa1000940:intron 65.0%
! GCTGAGGGCACAACAGGCAG+TGG - chr6_4:84298840-84298859 Msa1000940:CDS 65.0%
!! GGCGTGCAGGTTGGCTTCCA+CGG - chr6_4:84300389-84300408 Msa1000940:intron 65.0%
!! AGCCCTTCACGGGCTAGGGT+GGG + chr6_4:84301339-84301358 None:intergenic 65.0%
! TCAGTGGCGGAGCCCTTCAC+GGG + chr6_4:84301349-84301368 None:intergenic 65.0%
! GTCAGTGGCGGAGCCCTTCA+CGG + chr6_4:84301350-84301369 None:intergenic 65.0%
GGCGACACGTGTCCGACACC+GGG - chr6_4:84293939-84293958 Msa1000940:intron 70.0%
!! TCACGGGCTAGGGTGGGCCA+CGG + chr6_4:84301333-84301352 None:intergenic 70.0%
TGGCCCACCCTAGCCCGTGA+AGG - chr6_4:84301333-84301352 Msa1000940:intron 70.0%
GGCCCACCCTAGCCCGTGAA+GGG - chr6_4:84301334-84301353 Msa1000940:intron 70.0%
!! GAGCCCTTCACGGGCTAGGG+TGG + chr6_4:84301340-84301359 None:intergenic 70.0%
! GCGGAGCCCTTCACGGGCTA+GGG + chr6_4:84301343-84301362 None:intergenic 70.0%
GGCGGAGCCCTTCACGGGCT+AGG + chr6_4:84301344-84301363 None:intergenic 75.0%
! AGGGTGGGCCACGGCCCACC+CGG + chr6_4:84301324-84301343 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 84293369 84303576 84293369 ID=Msa1000940;Name=Msa1000940
chr6_4 mRNA 84293369 84303576 84293369 ID=Msa1000940-mRNA-1;Parent=Msa1000940;Name=Msa1000940-mRNA-1;_AED=0.14;_eAED=0.14;_QI=115|1|1|1|1|1|18|288|658
chr6_4 exon 84293369 84293767 84293369 ID=Msa1000940-mRNA-1:exon:16460;Parent=Msa1000940-mRNA-1
chr6_4 exon 84294101 84294202 84294101 ID=Msa1000940-mRNA-1:exon:16459;Parent=Msa1000940-mRNA-1
chr6_4 exon 84294381 84294449 84294381 ID=Msa1000940-mRNA-1:exon:16458;Parent=Msa1000940-mRNA-1
chr6_4 exon 84294735 84294824 84294735 ID=Msa1000940-mRNA-1:exon:16457;Parent=Msa1000940-mRNA-1
chr6_4 exon 84295955 84296024 84295955 ID=Msa1000940-mRNA-1:exon:16456;Parent=Msa1000940-mRNA-1
chr6_4 exon 84296181 84296250 84296181 ID=Msa1000940-mRNA-1:exon:16455;Parent=Msa1000940-mRNA-1
chr6_4 exon 84296377 84296563 84296377 ID=Msa1000940-mRNA-1:exon:16454;Parent=Msa1000940-mRNA-1
chr6_4 exon 84296859 84296943 84296859 ID=Msa1000940-mRNA-1:exon:16453;Parent=Msa1000940-mRNA-1
chr6_4 exon 84297103 84297281 84297103 ID=Msa1000940-mRNA-1:exon:16452;Parent=Msa1000940-mRNA-1
chr6_4 exon 84297885 84297989 84297885 ID=Msa1000940-mRNA-1:exon:16451;Parent=Msa1000940-mRNA-1
chr6_4 exon 84298072 84298155 84298072 ID=Msa1000940-mRNA-1:exon:16450;Parent=Msa1000940-mRNA-1
chr6_4 exon 84298792 84298872 84298792 ID=Msa1000940-mRNA-1:exon:16449;Parent=Msa1000940-mRNA-1
chr6_4 exon 84299406 84299624 84299406 ID=Msa1000940-mRNA-1:exon:16448;Parent=Msa1000940-mRNA-1
chr6_4 exon 84299764 84299865 84299764 ID=Msa1000940-mRNA-1:exon:16447;Parent=Msa1000940-mRNA-1
chr6_4 exon 84300196 84300271 84300196 ID=Msa1000940-mRNA-1:exon:16446;Parent=Msa1000940-mRNA-1
chr6_4 exon 84300416 84300567 84300416 ID=Msa1000940-mRNA-1:exon:16445;Parent=Msa1000940-mRNA-1
chr6_4 exon 84303169 84303284 84303169 ID=Msa1000940-mRNA-1:exon:16444;Parent=Msa1000940-mRNA-1
chr6_4 exon 84303383 84303576 84303383 ID=Msa1000940-mRNA-1:exon:16443;Parent=Msa1000940-mRNA-1
chr6_4 five_prime_UTR 84303462 84303576 84303462 ID=Msa1000940-mRNA-1:five_prime_utr;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84303383 84303461 84303383 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84303169 84303284 84303169 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84300416 84300567 84300416 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84300196 84300271 84300196 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84299764 84299865 84299764 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84299406 84299624 84299406 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84298792 84298872 84298792 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84298072 84298155 84298072 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84297885 84297989 84297885 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84297103 84297281 84297103 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84296859 84296943 84296859 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84296377 84296563 84296377 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84296181 84296250 84296181 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84295955 84296024 84295955 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84294735 84294824 84294735 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84294381 84294449 84294381 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84294101 84294202 84294101 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 CDS 84293657 84293767 84293657 ID=Msa1000940-mRNA-1:cds;Parent=Msa1000940-mRNA-1
chr6_4 three_prime_UTR 84293369 84293656 84293369 ID=Msa1000940-mRNA-1:three_prime_utr;Parent=Msa1000940-mRNA-1
Gene Sequence

>Msa1000940

ATGTTAGGGTTAGGTTGCTTAAACCTGAATCGATTATCTCATTTTCATTCTCCACCTTCTCTTCAACCTTCACGTTCTGATTTACTGAAAGTTGCAACTCGAAGATTCACTGCTTTATCTGTTACCAAAACTCAACAATCTTCATCACCTTCGCTGAATTCTAAAACTCAATCTTCTCCTCCTACCTTATCTATTGACATTGATAATCCTGCTAGTGTGAAAAGACAGTTAGCACAGCTGTTTGATGTTTCTCTAAAGACAATTGTGCCAGATGAGGAAGATGTTGTGCCCTTAGTTGATGTTTGCACCGCCAAAACTGGCAGTGTAAAATTCGGTGATTATCAATGTAATAATGCAATGGGTATATGGTCGAAGCTCAAAGGAAAGGAAACTGGATTCAAAGGTCCCCCTGCTATTGGACAGGCCATCATTAACAATCTTCCTCCATCTGAAATGATAGATTCATGCTCTTTAGCTGGTCCAGGATTTGTTAATGTTGTCTTGTCAAAGCATTGGATAGCTCAGAGCGTACAAAGGATGCTAAATGATGGTATTGATACCTGGGCACCTCGACTTCCAATCAGGAGGGCTATGGTTGATTTTTCCTCTCCTAATATAGCAAAGGAAATGCATGTTGGTCACCTTAGATCTACCATAATTGGAGACACATTAGCCCGCATGCTTGAATTTTCACGTGTGGAACTTGTTACCCGTCGAAATCATGTTGGTGACTGGGGAACGCAGTTTGGGATGCTGATCGAATACCTTTTTGAAAAATTTCCAAACCAAGAAGATGTTAGTGAAACAGCCATCGGAGATCTTCAGGCATTCTATAAGGCATCTAAAGTGAGGTTTGATGATGATCCCGAATTTAAGCTGAGGGCACAACAGGCAGTGGTTCTGCTCCAGAGTGGGGATACCAGGTATCGCAAGGCATGGCAACAAATTTGTGATATTAGTAGGGCTGAGTTTGACAAGGTCTATCAACGTCTTGGAGTTCAACTGGAGGAAATGGGAGAGAGCTTCTATAATCCATATATCCCCGGGGTTATTGAGAAGCTGGATAAATTAGGATTGGTGGAAGATAGTGATGGTGCTCGTGTGATATATGTTGAGGGTGTAAATATACCAATTATTGCTGTGAAAAGAGATGGTGGCTACAACTATTTTTCAACCGATCTCGCATCGCTTTGGTATCGTCTAAATAAAGAAAAACTCGAGTGGATTGTGTATGTTACTGATATTGGGCAACAGCAACACTTTGATATGCTATATAAGGCCTTTAGGCGTGCAGGTTGGCTTCCACGGAATGAGAACGCGTATCCAAAATGTACCCATATAGGTTTTGGTCTTGTTCTTGGGAATGACGGAAAACGATTTAGGAGTCGGAGCAGTGAGGTTGTTCGTTTGGTTGATTTACTTGATGAAGCTAAAAGGCGCTGTAAAACTGCCCTTCTTGAACGTGATACAACTAATGATTGGTCTGAGGAGGAGATTGAGAAAACATCAGAGGCAATTGGTTACGGGGCTGTTAAGTATGCTGACTTGAAGATCAACAGATTAACGAATTACAAGTTCGATTTTGATCAGATGCTTAGTGATAAGGGGAATACAGCAGTTTATTTGCTCTATGCACATGCTAGGATTTGTTCTATCATCAGGAAATCGGGTAAAGACATTGAAGAAGTAAAGAAGAATGGGGTTATTGTTTTGGATCATGAATCTGAGCGTTTATTGGGGCTTCATATACTACAATTTCCTGAGGTTTTTGAGGAGGCATGCAGCAATTTATTGCCTAATGTGCTGTGTGATTACCTCTATACCTTGGCAGAAATCTTTACGAAAAAGTTCTATTCTAATTGTCAGGTTGTAGGATCGCCTGAGGAAACTAGTAGACTTTTGCTATGTGAAGCAACTGCAATTGTGATGAGAAAGTGCTTTTATCTCCTTGGAATTGAACCTGTTTACAAGTTATAA
Protein sequence

>Msa1000940

MLGLGCLNLNRLSHFHSPPSLQPSRSDLLKVATRRFTALSVTKTQQSSSPSLNSKTQSSPPTLSIDIDNPASVKRQLAQLFDVSLKTIVPDEEDVVPLVDVCTAKTGSVKFGDYQCNNAMGIWSKLKGKETGFKGPPAIGQAIINNLPPSEMIDSCSLAGPGFVNVVLSKHWIAQSVQRMLNDGIDTWAPRLPIRRAMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSRVELVTRRNHVGDWGTQFGMLIEYLFEKFPNQEDVSETAIGDLQAFYKASKVRFDDDPEFKLRAQQAVVLLQSGDTRYRKAWQQICDISRAEFDKVYQRLGVQLEEMGESFYNPYIPGVIEKLDKLGLVEDSDGARVIYVEGVNIPIIAVKRDGGYNYFSTDLASLWYRLNKEKLEWIVYVTDIGQQQHFDMLYKAFRRAGWLPRNENAYPKCTHIGFGLVLGNDGKRFRSRSSEVVRLVDLLDEAKRRCKTALLERDTTNDWSEEEIEKTSEAIGYGAVKYADLKINRLTNYKFDFDQMLSDKGNTAVYLLYAHARICSIIRKSGKDIEEVKKNGVIVLDHESERLLGLHILQFPEVFEEACSNLLPNVLCDYLYTLAEIFTKKFYSNCQVVGSPEETSRLLLCEATAIVMRKCFYLLGIEPVYKL*