AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0277530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0277530 MtrunA17_Chr2g0286181 88.387 620 30 8 1 581 1 617 0.0 1065
Msa0277530 MtrunA17_Chr1g0155741 34.366 355 167 8 162 454 69 419 5.78e-48 174
Msa0277530 MtrunA17_Chr1g0186011 38.525 244 108 6 265 471 250 488 5.23e-35 138
Msa0277530 MtrunA17_Chr8g0358201 35.000 140 60 5 315 425 53 190 2.54e-13 72.0
Msa0277530 MtrunA17_Chr3g0129261 39.560 91 54 1 312 402 65 154 1.43e-12 69.3
Msa0277530 MtrunA17_Chr2g0292511 30.986 142 77 3 314 435 27 167 7.22e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0277530 AT5G18570.1 54.399 682 201 12 9 581 1 681 0.0 597
Msa0277530 AT1G07615.1 35.897 273 129 7 265 496 225 492 1.22e-35 140
Msa0277530 AT1G56050.1 35.385 130 53 5 315 415 57 184 1.20e-12 70.5
Msa0277530 AT4G39520.1 34.426 122 77 2 314 435 68 186 2.34e-12 69.3
Msa0277530 AT1G17470.1 33.333 114 70 2 314 422 65 177 1.68e-11 67.0
Msa0277530 AT1G17470.2 33.333 114 70 2 314 422 65 177 1.68e-11 67.0
Msa0277530 AT1G72660.2 33.333 114 70 2 314 422 65 177 2.67e-11 66.2
Msa0277530 AT1G72660.3 33.333 114 70 2 314 422 65 177 2.67e-11 66.2
Msa0277530 AT1G72660.1 33.333 114 70 2 314 422 65 177 2.67e-11 66.2
Msa0277530 AT1G30580.1 32.394 142 75 4 314 435 27 167 2.85e-11 66.2

Find 204 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAGTAATGCCACTCTAAT+TGG 0.191369 2_3:-10109280 Msa0277530:exon
CACAAGCCTCAAGGACATTT+TGG 0.211110 2_3:+10109793 None:intergenic
TGATGAAGAATTGGGGTTTA+TGG 0.218508 2_3:-10113368 Msa0277530:CDS
TTGTTATAAGCAACTATAAA+TGG 0.224726 2_3:+10110802 None:intergenic
TGGTAGGGAGGAGGTGATTT+TGG 0.235029 2_3:-10112963 Msa0277530:CDS
TTGAAGAAGGTGAAGAATTC+TGG 0.257218 2_3:-10113336 Msa0277530:CDS
TATAGTTGCTTATAACAAAA+TGG 0.257241 2_3:-10110797 Msa0277530:CDS
TACAACTTTGCTTCCCAATC+TGG 0.258739 2_3:-10111740 Msa0277530:CDS
TTCCAGAAGCATACGAAAAC+TGG 0.259566 2_3:-10110771 Msa0277530:CDS
TGTCCACAGATTCAATTAAA+TGG 0.293170 2_3:-10109310 Msa0277530:CDS
GAAGGAGCACACCGAGGTTT+TGG 0.293578 2_3:-10111658 Msa0277530:CDS
GAAATTTCCACCTCCATTCA+TGG 0.297081 2_3:-10109874 Msa0277530:CDS
ATGTACTGCAACTACGAAAT+AGG 0.304579 2_3:-10109241 Msa0277530:intron
GAGTGGCATTACTTCCATTC+AGG 0.312704 2_3:+10109287 None:intergenic
GGTCCATCCGGCGGGGATGG+AGG 0.317823 2_3:-10113163 Msa0277530:CDS
TTTAGGATTTGGAGGAGGTT+TGG 0.321312 2_3:+10113645 None:intergenic
TGAATTCGTTGTTACCGTTT+AGG 0.321891 2_3:-10113102 Msa0277530:CDS
TGAATGGAGGTGGAAATTTC+AGG 0.332899 2_3:+10109877 None:intergenic
AGTGTACTCTTCCCTGCATT+TGG 0.333641 2_3:+10111811 None:intergenic
GTCTGAAGATGATGAAGAAT+TGG 0.341137 2_3:-10113377 Msa0277530:CDS
TGCCACCAGGGACGGTGATT+AGG 0.343834 2_3:-10112991 Msa0277530:CDS
ATGGTAGTGGCAGACCTTCC+AGG 0.354141 2_3:-10111688 Msa0277530:CDS
CTTTGACTACGATTCAACTA+TGG 0.367402 2_3:-10111707 Msa0277530:CDS
GCCACCAGGGACGGTGATTA+GGG 0.368808 2_3:-10112990 Msa0277530:CDS
TATGCGCTGCTTATGAGCTT+TGG 0.374290 2_3:-10110663 Msa0277530:CDS
AGAGGAGGAAGGTGAGAAAG+TGG 0.379500 2_3:+10113528 None:intergenic
AATGGCTTCTCAGCAAGTTC+AGG 0.382943 2_3:+10110820 None:intergenic
CGTTGTTACCGTTTAGGAAT+GGG 0.384513 2_3:-10113096 Msa0277530:CDS
ATTTGGAGGAGGTTTGGATT+TGG 0.384864 2_3:+10113651 None:intergenic
GTTGCAGATGTTGGTATAGT+TGG 0.385284 2_3:-10111838 Msa0277530:CDS
GGAACGGAAGTATGGCATTC+AGG 0.387965 2_3:-10113210 Msa0277530:CDS
CCTACACTCGTCTCCCTCTC+AGG 0.390295 2_3:-10113564 Msa0277530:CDS
GACTTGTGGGTGTTGAGTTT+AGG 0.390754 2_3:+10113628 None:intergenic
TCCGGCGGGGATGGAGGGAG+AGG 0.391476 2_3:-10113157 Msa0277530:CDS
TTTCGTAGTTGCAGTACATA+TGG 0.391667 2_3:+10109245 None:intergenic
GCGGAGAGGAGTGGCGGTTC+CGG 0.400789 2_3:+10113601 None:intergenic
TGTATCAGATGGAGATGATA+TGG 0.401049 2_3:-10109373 Msa0277530:intron
CGTCATCGTTATCGAGTTTG+TGG 0.412865 2_3:+10113464 None:intergenic
GGCGGGGATGGAGGGAGAGG+TGG 0.414510 2_3:-10113154 Msa0277530:CDS
GCGAAAATCTTCGCGAAAGC+CGG 0.416186 2_3:-10113241 Msa0277530:CDS
CGGTTCCGGTGAGGACTTGT+GGG 0.419070 2_3:+10113615 None:intergenic
ATTCAATTAAATGGCCTGAA+TGG 0.419308 2_3:-10109301 Msa0277530:CDS
GGAGGTCCATCCGGCGGGGA+TGG 0.419349 2_3:-10113166 Msa0277530:CDS
CATGACTCCTCAAACAAATC+TGG 0.420155 2_3:-10109350 Msa0277530:CDS
AGACGGAGGGAACGGAAGTA+TGG 0.420800 2_3:-10113218 Msa0277530:CDS
TTGTGGAGCAATTGGTGAAT+TGG 0.422988 2_3:+10113481 None:intergenic
TATCGAGTTTGTGGAGCAAT+TGG 0.426319 2_3:+10113473 None:intergenic
TTTGTATGAGCGCTGTCAAA+AGG 0.426434 2_3:-10110705 Msa0277530:CDS
GACCTTCCAGGTCTTCTTGA+AGG 0.429947 2_3:-10111676 Msa0277530:CDS
CGAAAACTGGGAATCCTTCA+AGG 0.430197 2_3:-10110758 Msa0277530:CDS
TCTGAAGATGATGAAGAATT+GGG 0.434922 2_3:-10113376 Msa0277530:CDS
TTGGAACAAGATATAGAAAT+GGG 0.435555 2_3:+10113709 None:intergenic
AAGGGATAATTTGCCACCTC+TGG 0.436401 2_3:+10111763 None:intergenic
TTTCAGATACATGTCGTTGA+TGG 0.441011 2_3:-10110904 Msa0277530:intron
GAGAAATACGTACCGTTTGG+AGG 0.441360 2_3:-10113184 Msa0277530:CDS
GTGTTGAGTTTAGGATTTGG+AGG 0.451774 2_3:+10113637 None:intergenic
GTTGGAACAAGATATAGAAA+TGG 0.454024 2_3:+10113708 None:intergenic
TAGGGAGGCTGGTAGGGAGG+AGG 0.455313 2_3:-10112972 Msa0277530:CDS
AGAATTGGGGTTTATGGATG+AGG 0.456087 2_3:-10113362 Msa0277530:CDS
AGTGAAGGAGAAAGGATTGC+CGG 0.456941 2_3:-10113287 Msa0277530:CDS
AAAGGAAACAACGCCCAGAT+TGG 0.457445 2_3:+10111726 None:intergenic
CAGAAGGCGTTGTTGTTGCC+AGG 0.459645 2_3:-10112923 Msa0277530:CDS
TGGGTGTTGAGTTTAGGATT+TGG 0.459752 2_3:+10113634 None:intergenic
TCACCATTCTCAGCAATCTT+CGG 0.460210 2_3:+10112848 None:intergenic
CGGGAGAAATACGTACCGTT+TGG 0.460923 2_3:-10113187 Msa0277530:CDS
GTCCATCCGGCGGGGATGGA+GGG 0.465683 2_3:-10113162 Msa0277530:CDS
GAAGTAATGCCACTCTAATT+GGG 0.465787 2_3:-10109279 Msa0277530:exon
CACTGAAAGGTGTTCTGCAC+TGG 0.465901 2_3:-10111611 Msa0277530:intron
AAGGAAAAGTTGCAATCTCA+TGG 0.466487 2_3:-10110739 Msa0277530:CDS
AAGGAAACAACGCCCAGATT+GGG 0.467360 2_3:+10111727 None:intergenic
GAAGAAGAAGTGAAGGAGAA+AGG 0.468046 2_3:-10113295 Msa0277530:CDS
TGATGCACCAGATTTGTTTG+AGG 0.468296 2_3:+10109343 None:intergenic
ATAGTTGGTGCTCCAAATGC+AGG 0.468647 2_3:-10111823 Msa0277530:CDS
AGGTTTGGATTTGGTGCGGG+TGG 0.469088 2_3:+10113660 None:intergenic
TTGGGAAGCAAAGTTGTAAA+GGG 0.469159 2_3:+10111745 None:intergenic
AGTGTAGGTGGTGGCGTCGC+CGG 0.469582 2_3:+10113579 None:intergenic
ACAACTTTGCTTCCCAATCT+GGG 0.469782 2_3:-10111739 Msa0277530:CDS
CTCCCTCCATCCCCGCCGGA+TGG 0.470041 2_3:+10113160 None:intergenic
CGGTGATTAGGGAGGCTGGT+AGG 0.470355 2_3:-10112979 Msa0277530:CDS
ATGGATGAGGAGATTGAAGA+AGG 0.471799 2_3:-10113349 Msa0277530:CDS
TTGGTGAATTGGTGTTGATT+CGG 0.476681 2_3:+10113492 None:intergenic
ACCTCTCCCTCCATCCCCGC+CGG 0.477073 2_3:+10113156 None:intergenic
GGTGATTAGGGAGGCTGGTA+GGG 0.477415 2_3:-10112978 Msa0277530:CDS
AAATGAATCCCATTCCTAAA+CGG 0.482116 2_3:+10113088 None:intergenic
GCACCTTGCATCATGCCATC+AGG 0.482514 2_3:+10108834 None:intergenic
AGGAGGTTTGGATTTGGTGC+GGG 0.483449 2_3:+10113657 None:intergenic
GCCTCCCTAATCACCGTCCC+TGG 0.483881 2_3:+10112986 None:intergenic
CTTAAGCTGGTTGCAGATGT+TGG 0.485261 2_3:-10111847 Msa0277530:CDS
CAGGATGCAGATTGGTGCTA+AGG 0.485724 2_3:-10113035 Msa0277530:CDS
TCTCGTGAAACGTGGCGTAA+AGG 0.486465 2_3:-10109757 Msa0277530:CDS
TCGTTGTTACCGTTTAGGAA+TGG 0.488361 2_3:-10113097 Msa0277530:CDS
GATTAGGGAGGCTGGTAGGG+AGG 0.489143 2_3:-10112975 Msa0277530:CDS
AACAACAACGCCTTCTGTCC+CGG 0.491853 2_3:+10112929 None:intergenic
AAAGCCGGAGACGGAGGGAA+CGG 0.496700 2_3:-10113226 Msa0277530:CDS
GAAGGCGACAAAGTGATTGT+TGG 0.502678 2_3:-10109735 Msa0277530:CDS
ATGGATAGTCTCATGGAAAC+CGG 0.504266 2_3:-10109855 Msa0277530:CDS
ATTGGGAAGCAAAGTTGTAA+AGG 0.507169 2_3:+10111744 None:intergenic
GTACCGTTTGGAGGTCCATC+CGG 0.511732 2_3:-10113175 Msa0277530:CDS
TCCATTCATGGATAGTCTCA+TGG 0.512092 2_3:-10109862 Msa0277530:CDS
GTGGTGGTGAAGGTGCCACC+AGG 0.512551 2_3:-10113004 Msa0277530:CDS
AGGATGCAGATTGGTGCTAA+GGG 0.513323 2_3:-10113034 Msa0277530:CDS
CGGGCAGGGAGGGGTTCACA+TGG 0.515275 2_3:-10113064 Msa0277530:CDS
GCGGTTCCGGTGAGGACTTG+TGG 0.516657 2_3:+10113614 None:intergenic
CGTTTGGAGGTCCATCCGGC+GGG 0.518121 2_3:-10113171 Msa0277530:CDS
GCGTCGCCGGCGGAGAGGAG+TGG 0.520485 2_3:+10113592 None:intergenic
AGGCCATTTAATTGAATCTG+TGG 0.521022 2_3:+10109307 None:intergenic
ACTTCCGTTCCCTCCGTCTC+CGG 0.522717 2_3:+10113222 None:intergenic
GTAGCGAGGGTTGCGTGTGT+TGG 0.522876 2_3:+10113690 None:intergenic
ATTTGGTGCGGGTGGGTACA+CGG 0.523046 2_3:+10113668 None:intergenic
TTGTTGCCAGGTGGAAGAGG+TGG 0.524896 2_3:-10112911 Msa0277530:CDS
CCAGGTGGAAGAGGTGGGAG+AGG 0.525237 2_3:-10112905 Msa0277530:CDS
TTGAGTTTAGGATTTGGAGG+AGG 0.527636 2_3:+10113640 None:intergenic
GTACCTGTTAAAAGATTCAC+CGG 0.529115 2_3:+10109836 None:intergenic
GGGGTTCACATGGACAAGGC+AGG 0.529117 2_3:-10113054 Msa0277530:CDS
AGTTTGATTTCAGAGGAGGA+AGG 0.529524 2_3:+10113517 None:intergenic
CGGAAGTATGGCATTCAGGC+GGG 0.531074 2_3:-10113206 Msa0277530:CDS
GCTCCGAAGATTGCTGAGAA+TGG 0.532975 2_3:-10112851 Msa0277530:CDS
GTTCATGTAGGAAGCAAGTT+CGG 0.534930 2_3:-10108946 Msa0277530:three_prime_UTR
GGTTTGGATTTGGTGCGGGT+GGG 0.536171 2_3:+10113661 None:intergenic
GTTGGAGTTAGAACTTAAGC+TGG 0.538046 2_3:-10111860 Msa0277530:intron
TTGTTGTTGCCAGGTGGAAG+AGG 0.541521 2_3:-10112914 Msa0277530:CDS
CTTTACCGTTATGCTTCTTG+AGG 0.544281 2_3:+10108878 None:intergenic
CGGGTGGGTACACGGTAGCG+AGG 0.544633 2_3:+10113676 None:intergenic
GAAGACAGGGAGGAATATGA+AGG 0.545361 2_3:-10110628 Msa0277530:intron
TTGTATGAGCGCTGTCAAAA+GGG 0.547242 2_3:-10110704 Msa0277530:CDS
TTCGGAGAGTTTGATTTCAG+AGG 0.547664 2_3:+10113510 None:intergenic
AGGTGAAGAATTCTGGAGTG+AGG 0.548335 2_3:-10113329 Msa0277530:CDS
AGACTATCCATGAATGGAGG+TGG 0.549009 2_3:+10109867 None:intergenic
CCTCTCCCACCTCTTCCACC+TGG 0.549993 2_3:+10112905 None:intergenic
CGTTGATGGTTCATCACCAC+AGG 0.551266 2_3:-10110890 Msa0277530:CDS
CTACGATTCAACTATGGTAG+TGG 0.558121 2_3:-10111701 Msa0277530:CDS
GGGACGGTGATTAGGGAGGC+TGG 0.562217 2_3:-10112983 Msa0277530:CDS
TTAGTCAAGATACAGTCGTA+AGG 0.564302 2_3:-10108748 Msa0277530:three_prime_UTR
GGACAAGGCAGGATGCAGAT+TGG 0.565589 2_3:-10113043 Msa0277530:CDS
GGTGAAGGTGCCACCAGGGA+CGG 0.566312 2_3:-10112999 Msa0277530:CDS
GGAGAGTTTGATTTCAGAGG+AGG 0.566759 2_3:+10113513 None:intergenic
GTAGGTGGTGGCGTCGCCGG+CGG 0.567740 2_3:+10113582 None:intergenic
AAAATGAGATGACATATATG+AGG 0.568855 2_3:-10108921 Msa0277530:three_prime_UTR
GAGGAGGTTTGGATTTGGTG+CGG 0.571529 2_3:+10113656 None:intergenic
CATAGTTGAATCGTAGTCAA+AGG 0.571566 2_3:+10111708 None:intergenic
CTGAAGATGATGAAGAATTG+GGG 0.573252 2_3:-10113375 Msa0277530:CDS
CAAAATGTCCTTGAGGCTTG+TGG 0.573547 2_3:-10109792 Msa0277530:CDS
TCAAAACACCGCATCACCGC+CGG 0.575828 2_3:+10113268 None:intergenic
CCGCCGGATGGACCTCCAAA+CGG 0.576146 2_3:+10113172 None:intergenic
AGCTGCCTCAAGAAGCATAA+CGG 0.578319 2_3:-10108883 Msa0277530:three_prime_UTR
TTGACAGCGCTCATACAAAG+AGG 0.579413 2_3:+10110709 None:intergenic
CAGGTGGAAGAGGTGGGAGA+GGG 0.580361 2_3:-10112904 Msa0277530:CDS
AAGGATTGCCGGCGGTGATG+CGG 0.581747 2_3:-10113276 Msa0277530:CDS
TGTGCTCCTTCAAGAAGACC+TGG 0.583192 2_3:+10111670 None:intergenic
TCCAGAAGCATACGAAAACT+GGG 0.583546 2_3:-10110770 Msa0277530:CDS
TCCATGAGACTATCCATGAA+TGG 0.584135 2_3:+10109861 None:intergenic
TGGTGGCGTCGCCGGCGGAG+AGG 0.584884 2_3:+10113587 None:intergenic
ATCTTCGCGAAAGCCGGAGA+CGG 0.585928 2_3:-10113235 Msa0277530:CDS
CGACAAAGTGATTGTTGGAG+AGG 0.586228 2_3:-10109730 Msa0277530:intron
TCGCGAAAGCCGGAGACGGA+GGG 0.586944 2_3:-10113231 Msa0277530:CDS
AATTACACACTTGTTCCTGA+TGG 0.587412 2_3:-10108849 Msa0277530:three_prime_UTR
AGGAAAAGTTGCAATCTCAT+GGG 0.588616 2_3:-10110738 Msa0277530:CDS
GATGGTGTATCCGGGACAGA+AGG 0.588814 2_3:-10112939 Msa0277530:CDS
GATGCAGATTGGTGCTAAGG+GGG 0.591936 2_3:-10113032 Msa0277530:CDS
TTCGCGAAAGCCGGAGACGG+AGG 0.592060 2_3:-10113232 Msa0277530:CDS
GTGAAACGTGGCGTAAAGGA+AGG 0.597774 2_3:-10109753 Msa0277530:CDS
CTACACTCGTCTCCCTCTCA+GGG 0.600984 2_3:-10113563 Msa0277530:CDS
CCGTTTGGAGGTCCATCCGG+CGG 0.606392 2_3:-10113172 Msa0277530:CDS
ACGGAAGTATGGCATTCAGG+CGG 0.612451 2_3:-10113207 Msa0277530:CDS
CAACACCCACAAGTCCTCAC+CGG 0.612873 2_3:-10113620 Msa0277530:CDS
GGGTGGGTACACGGTAGCGA+GGG 0.615506 2_3:+10113677 None:intergenic
TTTAAGTCTCTCGTGAAACG+TGG 0.617643 2_3:-10109765 Msa0277530:CDS
TCCCTAATCACCGTCCCTGG+TGG 0.618886 2_3:+10112989 None:intergenic
CCTGAGAGGGAGACGAGTGT+AGG 0.619759 2_3:+10113564 None:intergenic
TAAATACACCACAAGCCTCA+AGG 0.620582 2_3:+10109784 None:intergenic
GGGAGGGGTTCACATGGACA+AGG 0.621316 2_3:-10113058 Msa0277530:CDS
GTTCCTGATGGCATGATGCA+AGG 0.622424 2_3:-10108837 Msa0277530:three_prime_UTR
TGATGAGCAGCAGTTCATGT+AGG 0.626974 2_3:-10108958 Msa0277530:intron
ATTGCTGAGAATGGTGAACA+AGG 0.627576 2_3:-10112842 Msa0277530:intron
GAGAGGGAGACGAGTGTAGG+TGG 0.629633 2_3:+10113567 None:intergenic
AAGATTCCAAAATGTCCTTG+AGG 0.629860 2_3:-10109799 Msa0277530:CDS
AATTTCTGCGACACACTGAA+AGG 0.631516 2_3:-10111624 Msa0277530:CDS
GGATGCAGATTGGTGCTAAG+GGG 0.631737 2_3:-10113033 Msa0277530:CDS
TCGCCGGCGGAGAGGAGTGG+CGG 0.632323 2_3:+10113595 None:intergenic
GAACCGCCACTCCTCTCCGC+CGG 0.632897 2_3:-10113598 Msa0277530:CDS
AGGGAGACGAGTGTAGGTGG+TGG 0.634657 2_3:+10113570 None:intergenic
TAGTTGGTGCTCCAAATGCA+GGG 0.637534 2_3:-10111822 Msa0277530:CDS
AAGAGAAGTCTTCCCTGAGA+GGG 0.638307 2_3:+10113551 None:intergenic
ATGAGCGCTGTCAAAAGGGA+AGG 0.638324 2_3:-10110700 Msa0277530:CDS
TTGTGAGCAGTTGAAGACCT+CGG 0.638534 2_3:+10108776 None:intergenic
ACCAGGGACGGTGATTAGGG+AGG 0.638899 2_3:-10112987 Msa0277530:CDS
CTCCTTCAAGAAGACCTGGA+AGG 0.639991 2_3:+10111674 None:intergenic
TAGTGCTGCAAAGCCAGAGG+TGG 0.645616 2_3:-10111776 Msa0277530:CDS
GAGGAGTGGCGGTTCCGGTG+AGG 0.646720 2_3:+10113606 None:intergenic
CTAGAAGCACCCAATTAGAG+TGG 0.650772 2_3:+10109270 None:intergenic
AAGGCGTTGTTGTTGCCAGG+TGG 0.650877 2_3:-10112920 Msa0277530:CDS
TGTTGCCAGGTGGAAGAGGT+GGG 0.652771 2_3:-10112910 Msa0277530:CDS
GAAGAGAAGTCTTCCCTGAG+AGG 0.656534 2_3:+10113550 None:intergenic
GTTTGGAGGTCCATCCGGCG+GGG 0.667873 2_3:-10113170 Msa0277530:CDS
TATTAGTGCTGCAAAGCCAG+AGG 0.678097 2_3:-10111779 Msa0277530:CDS
GAGAGGTGGAAATGTGTACG+TGG 0.681715 2_3:-10113140 Msa0277530:CDS
CTTCTTGAAGGAGCACACCG+AGG 0.684238 2_3:-10111664 Msa0277530:CDS
ATGAGACTATCCATGAATGG+AGG 0.684788 2_3:+10109864 None:intergenic
TGGTAACTTCAATCTCACCA+TGG 0.685757 2_3:-10113738 Msa0277530:CDS
ATAGAAATGGGAGAGAACCA+TGG 0.689431 2_3:+10113721 None:intergenic
CATGACCTAAACCAAAACCT+CGG 0.704819 2_3:+10111647 None:intergenic
TGGTGGTGAAGGTGCCACCA+GGG 0.707166 2_3:-10113003 Msa0277530:CDS
TCAAACTCAAGATCTGCCTG+TGG 0.718680 2_3:+10110874 None:intergenic
GAAGGAGAAAGGATTGCCGG+CGG 0.728649 2_3:-10113284 Msa0277530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAAATTTTGATTTGA+AGG - chr2_3:10109888-10109907 Msa0277530:CDS 10.0%
!!! TTTTAAAATTTTGATTTGAA+GGG - chr2_3:10109889-10109908 Msa0277530:CDS 10.0%
!!! TTGTTTTTTTTTTTTTGTTT+TGG - chr2_3:10110357-10110376 Msa0277530:intron 10.0%
!!! AAACTTGATATTTTTTTTCA+TGG + chr2_3:10110525-10110544 None:intergenic 15.0%
!! TACATATCTATCTTATATTT+AGG - chr2_3:10110961-10110980 Msa0277530:intron 15.0%
!!! TTTAAAATTAGTCTTTACAT+TGG - chr2_3:10111556-10111575 Msa0277530:intron 15.0%
!!! TTAAAATTAGTCTTTACATT+GGG - chr2_3:10111557-10111576 Msa0277530:intron 15.0%
!! ATCATACCATTATTAAAATA+AGG + chr2_3:10113278-10113297 None:intergenic 15.0%
!!! TATTTTAATAATGGTATGAT+TGG - chr2_3:10113278-10113297 Msa0277530:CDS 15.0%
!! AAAACACATAGTATATCTTA+TGG + chr2_3:10109702-10109721 None:intergenic 20.0%
!!! GAGAAATGATACTTTTTTTT+TGG - chr2_3:10109924-10109943 Msa0277530:intron 20.0%
!! CCAATCAAAAATACAAATAT+GGG + chr2_3:10110186-10110205 None:intergenic 20.0%
!! ACCAATCAAAAATACAAATA+TGG + chr2_3:10110187-10110206 None:intergenic 20.0%
!! ACTATCAAATATAATCTTAG+AGG + chr2_3:10110279-10110298 None:intergenic 20.0%
!! AAAAAAATCGTTTAAGAGAA+GGG + chr2_3:10111078-10111097 None:intergenic 20.0%
!! AAAAAAAATCGTTTAAGAGA+AGG + chr2_3:10111079-10111098 None:intergenic 20.0%
!! ACACTTGAAATATATAACTT+AGG - chr2_3:10111105-10111124 Msa0277530:intron 20.0%
!! CAAAAATAAAGGTAAGATAA+CGG + chr2_3:10111237-10111256 None:intergenic 20.0%
!! TATATCAATGTTTAAACCAA+TGG + chr2_3:10111400-10111419 None:intergenic 20.0%
!!! ATTTTAAACAGCAGATTTAA+GGG + chr2_3:10111544-10111563 None:intergenic 20.0%
!!! AATTTTAAACAGCAGATTTA+AGG + chr2_3:10111545-10111564 None:intergenic 20.0%
!! TTGTTATAAGCAACTATAAA+TGG + chr2_3:10111685-10111704 None:intergenic 20.0%
!! TATAGTTGCTTATAACAAAA+TGG - chr2_3:10111687-10111706 Msa0277530:CDS 20.0%
!! TTTACAGAAAAAGAATAATC+TGG + chr2_3:10111926-10111945 None:intergenic 20.0%
!!! CGGTTCTTTTTTTTTTTTTT+TGG + chr2_3:10112488-10112507 None:intergenic 20.0%
!! GAATAGCATGAAAAATATAA+AGG - chr2_3:10112513-10112532 Msa0277530:intron 20.0%
!!! AAATATCAATATTTTCGATC+AGG - chr2_3:10113474-10113493 Msa0277530:CDS 20.0%
!!! AATATCAATATTTTCGATCA+GGG - chr2_3:10113475-10113494 Msa0277530:CDS 20.0%
! TTGGAACAAGATATAGAAAT+GGG + chr2_3:10108778-10108797 None:intergenic 25.0%
!! GAAATCAATGGTAATTTTGA+AGG - chr2_3:10109075-10109094 Msa0277530:intron 25.0%
!!! AATGGTAATTTTGAAGGAAT+TGG - chr2_3:10109081-10109100 Msa0277530:intron 25.0%
!!! GATGTTTTAAAAACCAAACT+AGG - chr2_3:10109731-10109750 Msa0277530:CDS 25.0%
! TACTTTAAACCATTAAAACC+AGG + chr2_3:10109822-10109841 None:intergenic 25.0%
! AAAGTAGTTGAACTATGATT+CGG - chr2_3:10109836-10109855 Msa0277530:CDS 25.0%
! TGTAGGTTTGATGTTTAATT+CGG - chr2_3:10109865-10109884 Msa0277530:CDS 25.0%
! AAAACACACATAAAAACCAA+AGG + chr2_3:10109988-10110007 None:intergenic 25.0%
!!! CCCATATTTGTATTTTTGAT+TGG - chr2_3:10110183-10110202 Msa0277530:intron 25.0%
!!! AAACTAGACTTGTTTTTGTT+TGG - chr2_3:10110461-10110480 Msa0277530:intron 25.0%
!! ATTTTATATAGTTAGGCACT+TGG - chr2_3:10110936-10110955 Msa0277530:intron 25.0%
!! TTTTATATAGTTAGGCACTT+GGG - chr2_3:10110937-10110956 Msa0277530:intron 25.0%
!!! TAGAGTTTTTTGAAGGAAAA+AGG + chr2_3:10111045-10111064 None:intergenic 25.0%
!!! TGAAGTTTAGAGTTTTTTGA+AGG + chr2_3:10111052-10111071 None:intergenic 25.0%
!! TGTTTGCTTATTTAAGCTTT+TGG - chr2_3:10111198-10111217 Msa0277530:intron 25.0%
! ACGGAAAAAAGCAAAAATAA+AGG + chr2_3:10111248-10111267 None:intergenic 25.0%
! TATCTACTAATCGATTGATT+TGG + chr2_3:10111298-10111317 None:intergenic 25.0%
! TGTAAAAACTTCTTTGCATT+TGG - chr2_3:10111940-10111959 Msa0277530:intron 25.0%
! AAAAATCTCAAAATCACTGA+TGG + chr2_3:10112049-10112068 None:intergenic 25.0%
! CATGTAATAAAACTACAAAC+TGG + chr2_3:10112223-10112242 None:intergenic 25.0%
! GACAAATATAGAAAAAATGC+AGG + chr2_3:10112314-10112333 None:intergenic 25.0%
! TATTTGTGATCACATAAGTA+AGG - chr2_3:10112342-10112361 Msa0277530:intron 25.0%
!!! TTTTTCATGCTATTCTAGAA+CGG + chr2_3:10112508-10112527 None:intergenic 25.0%
!! TGTTAGTAAAAAAGTGTATC+AGG - chr2_3:10112572-10112591 Msa0277530:intron 25.0%
!!! GCAAGACCTTATTTTAATAA+TGG - chr2_3:10113269-10113288 Msa0277530:CDS 25.0%
!!! TATTTAATGAGAGTATTGAC+AGG + chr2_3:10113330-10113349 None:intergenic 25.0%
! ATATTCCAGGAAATTGTTAT+AGG + chr2_3:10113390-10113409 None:intergenic 25.0%
! AAAATGAGATGACATATATG+AGG - chr2_3:10113563-10113582 Msa0277530:CDS 25.0%
GTTGGAACAAGATATAGAAA+TGG + chr2_3:10108779-10108798 None:intergenic 30.0%
GAAGAAGAAGAAGAAATCAA+TGG - chr2_3:10109063-10109082 Msa0277530:intron 30.0%
TCTGAAGATGATGAAGAATT+GGG - chr2_3:10109108-10109127 Msa0277530:intron 30.0%
AAATGAATCCCATTCCTAAA+CGG + chr2_3:10109399-10109418 None:intergenic 30.0%
! TTAGGAATGGGATTCATTTT+CGG - chr2_3:10109400-10109419 Msa0277530:intron 30.0%
ACACATAGTATATCTTATGG+TGG + chr2_3:10109699-10109718 None:intergenic 30.0%
ACTAATTAAACTGCCTAGTT+TGG + chr2_3:10109747-10109766 None:intergenic 30.0%
AACTGACATTGTCTATTGTA+CGG - chr2_3:10109776-10109795 Msa0277530:CDS 30.0%
! ATTCAAACACAATTTTGTCC+TGG - chr2_3:10109801-10109820 Msa0277530:CDS 30.0%
!!! CAATTTTGTCCTGGTTTTAA+TGG - chr2_3:10109810-10109829 Msa0277530:CDS 30.0%
!!! TTGATTTGAAGGGTGTTTTT+AGG - chr2_3:10109899-10109918 Msa0277530:intron 30.0%
TGGAAGTTAAAAGTAAGACA+TGG - chr2_3:10110026-10110045 Msa0277530:intron 30.0%
GTCATTTAAACATCGAAACA+CGG + chr2_3:10110083-10110102 None:intergenic 30.0%
TTAGAGGAACAAAACTGAAA+AGG + chr2_3:10110263-10110282 None:intergenic 30.0%
TTATTCTTGTTCGAGATTGT+TGG - chr2_3:10110497-10110516 Msa0277530:intron 30.0%
TATTCTTGTTCGAGATTGTT+GGG - chr2_3:10110498-10110517 Msa0277530:intron 30.0%
!!! TTCTTTTGTTTTCCTGAATC+TGG - chr2_3:10110545-10110564 Msa0277530:intron 30.0%
! CGTATATGAATTTGAAACTC+AGG + chr2_3:10110571-10110590 None:intergenic 30.0%
!!! AATGCTGGTTTCTTTTGATT+AGG - chr2_3:10110599-10110618 Msa0277530:intron 30.0%
CAATACGAAGTTAGATCAAA+AGG + chr2_3:10111140-10111159 None:intergenic 30.0%
GAGATATAACAGTTATCAGA+CGG + chr2_3:10111267-10111286 None:intergenic 30.0%
AACATAAAGACATTCAGAGT+GGG + chr2_3:10111330-10111349 None:intergenic 30.0%
TCCAAAAATTCATTGTTCCA+AGG - chr2_3:10111369-10111388 Msa0277530:intron 30.0%
CCAAAAATTCATTGTTCCAA+GGG - chr2_3:10111370-10111389 Msa0277530:intron 30.0%
ACACTCATAAGCTAAATAGA+TGG + chr2_3:10111427-10111446 None:intergenic 30.0%
GCGTAAAAATAAAGAAGACA+GGG - chr2_3:10111843-10111862 Msa0277530:CDS 30.0%
TAAAAATAAAGAAGACAGGG+AGG - chr2_3:10111846-10111865 Msa0277530:CDS 30.0%
CTAATCTAACCTATTTCAGA+TGG - chr2_3:10111964-10111983 Msa0277530:intron 30.0%
ATGATAGCAGTTCAAATGTT+TGG - chr2_3:10112070-10112089 Msa0277530:intron 30.0%
GTAATAAAACTACAAACTGG+TGG + chr2_3:10112220-10112239 None:intergenic 30.0%
!!! TTTTTTGGCAAAGTCTAGAA+AGG + chr2_3:10112473-10112492 None:intergenic 30.0%
AGCATGAAAAATATAAAGGC+TGG - chr2_3:10112517-10112536 Msa0277530:intron 30.0%
!!! GACATTTTGGAATCTTTTCT+CGG + chr2_3:10112681-10112700 None:intergenic 30.0%
ATCTTATTGCTGATGTTTCT+AGG + chr2_3:10112987-10113006 None:intergenic 30.0%
AGAAACATCAGCAATAAGAT+AGG - chr2_3:10112987-10113006 Msa0277530:CDS 30.0%
GAAACATCAGCAATAAGATA+GGG - chr2_3:10112988-10113007 Msa0277530:CDS 30.0%
AAACATCAGCAATAAGATAG+GGG - chr2_3:10112989-10113008 Msa0277530:CDS 30.0%
TGTCCACAGATTCAATTAAA+TGG - chr2_3:10113174-10113193 Msa0277530:CDS 30.0%
ATTCAATTAAATGGCCTGAA+TGG - chr2_3:10113183-10113202 Msa0277530:CDS 30.0%
ATATAGTACAGCATTTACCA+TGG - chr2_3:10113347-10113366 Msa0277530:CDS 30.0%
CCATTATGTACAAATATTCC+AGG + chr2_3:10113403-10113422 None:intergenic 30.0%
CCTGGAATATTTGTACATAA+TGG - chr2_3:10113400-10113419 Msa0277530:CDS 30.0%
!! TTGGTGAATTGGTGTTGATT+CGG + chr2_3:10108995-10109014 None:intergenic 35.0%
GTCTGAAGATGATGAAGAAT+TGG - chr2_3:10109107-10109126 Msa0277530:intron 35.0%
CTGAAGATGATGAAGAATTG+GGG - chr2_3:10109109-10109128 Msa0277530:intron 35.0%
TGATGAAGAATTGGGGTTTA+TGG - chr2_3:10109116-10109135 Msa0277530:intron 35.0%
TTGAAGAAGGTGAAGAATTC+TGG - chr2_3:10109148-10109167 Msa0277530:intron 35.0%
TGAAGAAGAAGAAGAAGTGA+AGG - chr2_3:10109182-10109201 Msa0277530:intron 35.0%
TGAATTCGTTGTTACCGTTT+AGG - chr2_3:10109382-10109401 Msa0277530:intron 35.0%
! TAGGAATGGGATTCATTTTC+GGG - chr2_3:10109401-10109420 Msa0277530:intron 35.0%
TGATACTTTGATGTCCAGTA+TGG - chr2_3:10109959-10109978 Msa0277530:intron 35.0%
! TTTTAAATGCCTGCAAGTTG+TGG - chr2_3:10110006-10110025 Msa0277530:intron 35.0%
!!! TTTTAACTTCCACAACTTGC+AGG + chr2_3:10110018-10110037 None:intergenic 35.0%
GACATGGAGATAAGCATATA+CGG - chr2_3:10110042-10110061 Msa0277530:intron 35.0%
TGTCCACAGTTCATAACAAA+CGG - chr2_3:10110303-10110322 Msa0277530:intron 35.0%
! AACAAGTCTAGTTTCAGACA+TGG + chr2_3:10110342-10110361 None:intergenic 35.0%
! AACAAGTCTAGTTTCAGACA+TGG + chr2_3:10110342-10110361 None:intergenic 35.0%
ATTCTTGTTCGAGATTGTTG+GGG - chr2_3:10110499-10110518 Msa0277530:intron 35.0%
ATATACGAGTCTAAGAATGC+TGG - chr2_3:10110584-10110603 Msa0277530:intron 35.0%
!! GTTTCTTTTGATTAGGTGGT+TGG - chr2_3:10110606-10110625 Msa0277530:intron 35.0%
TTGGGAAGCAAAGTTGTAAA+GGG + chr2_3:10110742-10110761 None:intergenic 35.0%
ATTGGGAAGCAAAGTTGTAA+AGG + chr2_3:10110743-10110762 None:intergenic 35.0%
CATAGTTGAATCGTAGTCAA+AGG + chr2_3:10110779-10110798 None:intergenic 35.0%
CTTTGACTACGATTCAACTA+TGG - chr2_3:10110777-10110796 Msa0277530:CDS 35.0%
TTGAAGGAAAAAGGAAAGCA+AGG + chr2_3:10111036-10111055 None:intergenic 35.0%
!! TAATCGATTGATTTGGAGTC+TGG + chr2_3:10111291-10111310 None:intergenic 35.0%
CAACATAAAGACATTCAGAG+TGG + chr2_3:10111331-10111350 None:intergenic 35.0%
! CCCTTGGAACAATGAATTTT+TGG + chr2_3:10111373-10111392 None:intergenic 35.0%
TTAAACCAATGGATAACCCT+TGG + chr2_3:10111389-10111408 None:intergenic 35.0%
! ATTTTTCTGTATGAACCCTC+TGG - chr2_3:10111459-10111478 Msa0277530:intron 35.0%
TGAAATAGCATACTACCAGA+GGG + chr2_3:10111477-10111496 None:intergenic 35.0%
TTGAAATAGCATACTACCAG+AGG + chr2_3:10111478-10111497 None:intergenic 35.0%
ATTTAAGGGTGAGAAAATGG+AGG + chr2_3:10111530-10111549 None:intergenic 35.0%
CAGATTTAAGGGTGAGAAAA+TGG + chr2_3:10111533-10111552 None:intergenic 35.0%
TTTCAGATACATGTCGTTGA+TGG - chr2_3:10111580-10111599 Msa0277530:intron 35.0%
! AGATTGCAACTTTTCCTTGA+AGG + chr2_3:10111743-10111762 None:intergenic 35.0%
AAGGAAAAGTTGCAATCTCA+TGG - chr2_3:10111745-10111764 Msa0277530:CDS 35.0%
AGGAAAAGTTGCAATCTCAT+GGG - chr2_3:10111746-10111765 Msa0277530:CDS 35.0%
GGCGTAAAAATAAAGAAGAC+AGG - chr2_3:10111842-10111861 Msa0277530:CDS 35.0%
! ATATCTCGTCCATCTGAAAT+AGG + chr2_3:10111976-10111995 None:intergenic 35.0%
TATTTCAGATGGACGAGATA+TGG - chr2_3:10111975-10111994 Msa0277530:intron 35.0%
CATGAATCATATTGCTCATG+CGG - chr2_3:10112002-10112021 Msa0277530:intron 35.0%
! GTTTTGTCCAGATGACAAAT+TGG - chr2_3:10112118-10112137 Msa0277530:intron 35.0%
!!! AACAATAGCCAGCTACTTTT+TGG + chr2_3:10112432-10112451 None:intergenic 35.0%
AAAAAGTAGCTGGCTATTGT+TGG - chr2_3:10112431-10112450 Msa0277530:intron 35.0%
! AAACCGGTGAATCTTTTAAC+AGG - chr2_3:10112645-10112664 Msa0277530:intron 35.0%
GTACCTGTTAAAAGATTCAC+CGG + chr2_3:10112651-10112670 None:intergenic 35.0%
AAGATTCCAAAATGTCCTTG+AGG - chr2_3:10112685-10112704 Msa0277530:intron 35.0%
CGAATGAAGCAATTAGCATA+TGG - chr2_3:10112832-10112851 Msa0277530:intron 35.0%
TCGAAACATTGCTTCCTTAA+AGG - chr2_3:10112897-10112916 Msa0277530:CDS 35.0%
AAACATTGCTTCCTTAAAGG+TGG - chr2_3:10112900-10112919 Msa0277530:CDS 35.0%
TAGTGTTTGTTCCACCTTTA+AGG + chr2_3:10112914-10112933 None:intergenic 35.0%
CAAATTCTAGGTTACTCTTG+AGG + chr2_3:10112957-10112976 None:intergenic 35.0%
CTAGGCTAGAAACAAATTCT+AGG + chr2_3:10112969-10112988 None:intergenic 35.0%
CTGATACATAGCAGAACAAA+TGG + chr2_3:10113099-10113118 None:intergenic 35.0%
TTGTTCTGCTATGTATCAGA+TGG - chr2_3:10113100-10113119 Msa0277530:CDS 35.0%
TGTATCAGATGGAGATGATA+TGG - chr2_3:10113111-10113130 Msa0277530:CDS 35.0%
AGGCCATTTAATTGAATCTG+TGG + chr2_3:10113180-10113199 None:intergenic 35.0%
GAAGTAATGCCACTCTAATT+GGG - chr2_3:10113205-10113224 Msa0277530:CDS 35.0%
AATTACACACTTGTTCCTGA+TGG - chr2_3:10113635-10113654 Msa0277530:CDS 35.0%
TTAGTCAAGATACAGTCGTA+AGG - chr2_3:10113736-10113755 Msa0277530:CDS 35.0%
TAGTCAAGATACAGTCGTAA+GGG - chr2_3:10113737-10113756 Msa0277530:CDS 35.0%
TGGTAACTTCAATCTCACCA+TGG - chr2_3:10108746-10108765 Msa0277530:three_prime_UTR 40.0%
ATAGAAATGGGAGAGAACCA+TGG + chr2_3:10108766-10108785 None:intergenic 40.0%
ATTTGGAGGAGGTTTGGATT+TGG + chr2_3:10108836-10108855 None:intergenic 40.0%
! TTTAGGATTTGGAGGAGGTT+TGG + chr2_3:10108842-10108861 None:intergenic 40.0%
! TTGAGTTTAGGATTTGGAGG+AGG + chr2_3:10108847-10108866 None:intergenic 40.0%
! GTGTTGAGTTTAGGATTTGG+AGG + chr2_3:10108850-10108869 None:intergenic 40.0%
!! TGGGTGTTGAGTTTAGGATT+TGG + chr2_3:10108853-10108872 None:intergenic 40.0%
! AGTTTGATTTCAGAGGAGGA+AGG + chr2_3:10108970-10108989 None:intergenic 40.0%
! TTCGGAGAGTTTGATTTCAG+AGG + chr2_3:10108977-10108996 None:intergenic 40.0%
TTGTGGAGCAATTGGTGAAT+TGG + chr2_3:10109006-10109025 None:intergenic 40.0%
TATCGAGTTTGTGGAGCAAT+TGG + chr2_3:10109014-10109033 None:intergenic 40.0%
AGAATTGGGGTTTATGGATG+AGG - chr2_3:10109122-10109141 Msa0277530:intron 40.0%
ATGGATGAGGAGATTGAAGA+AGG - chr2_3:10109135-10109154 Msa0277530:intron 40.0%
GAAGAAGAAGTGAAGGAGAA+AGG - chr2_3:10109189-10109208 Msa0277530:intron 40.0%
TCGTTGTTACCGTTTAGGAA+TGG - chr2_3:10109387-10109406 Msa0277530:intron 40.0%
CGTTGTTACCGTTTAGGAAT+GGG - chr2_3:10109388-10109407 Msa0277530:intron 40.0%
!! GATTTTGGAGATGGTGTATC+CGG - chr2_3:10109536-10109555 Msa0277530:intron 40.0%
!! ATTTTGGAGATGGTGTATCC+GGG - chr2_3:10109537-10109556 Msa0277530:intron 40.0%
!!! GGAATGCTGCTTTTAAGAGT+GGG - chr2_3:10109601-10109620 Msa0277530:intron 40.0%
TCACCATTCTCAGCAATCTT+CGG + chr2_3:10109639-10109658 None:intergenic 40.0%
ATTGCTGAGAATGGTGAACA+AGG - chr2_3:10109642-10109661 Msa0277530:intron 40.0%
! GTAGTTGAACTATGATTCGG+TGG - chr2_3:10109839-10109858 Msa0277530:CDS 40.0%
AAAACCAAAGGACACCATAC+TGG + chr2_3:10109976-10109995 None:intergenic 40.0%
GAAAGAAGTCGTGACTTTAG+AGG - chr2_3:10110159-10110178 Msa0277530:intron 40.0%
GAGTATGTAACGTATGTGAG+TGG - chr2_3:10110207-10110226 Msa0277530:intron 40.0%
TGGCATTAAAAGCGAGCATA+TGG - chr2_3:10110227-10110246 Msa0277530:intron 40.0%
ATTAAAAGCGAGCATATGGC+TGG - chr2_3:10110231-10110250 Msa0277530:intron 40.0%
!! TCTCCGTTTGTTATGAACTG+TGG + chr2_3:10110309-10110328 None:intergenic 40.0%
!!! TTTTGTTTTGGCTTTCGCAC+CGG - chr2_3:10110369-10110388 Msa0277530:intron 40.0%
!! GCTGGTTTCTTTTGATTAGG+TGG - chr2_3:10110602-10110621 Msa0277530:intron 40.0%
GTTGGAGTTAGAACTTAAGC+TGG - chr2_3:10110624-10110643 Msa0277530:intron 40.0%
GTTGCAGATGTTGGTATAGT+TGG - chr2_3:10110646-10110665 Msa0277530:CDS 40.0%
TACAACTTTGCTTCCCAATC+TGG - chr2_3:10110744-10110763 Msa0277530:CDS 40.0%
ACAACTTTGCTTCCCAATCT+GGG - chr2_3:10110745-10110764 Msa0277530:CDS 40.0%
CTACGATTCAACTATGGTAG+TGG - chr2_3:10110783-10110802 Msa0277530:CDS 40.0%
CATGACCTAAACCAAAACCT+CGG + chr2_3:10110840-10110859 None:intergenic 40.0%
AATTTCTGCGACACACTGAA+AGG - chr2_3:10110860-10110879 Msa0277530:CDS 40.0%
TTGTTCCAAGGGTTATCCAT+TGG - chr2_3:10111381-10111400 Msa0277530:intron 40.0%
! TTCCAGAAGCATACGAAAAC+TGG - chr2_3:10111713-10111732 Msa0277530:CDS 40.0%
! TCCAGAAGCATACGAAAACT+GGG - chr2_3:10111714-10111733 Msa0277530:CDS 40.0%
! TTTGTATGAGCGCTGTCAAA+AGG - chr2_3:10111779-10111798 Msa0277530:CDS 40.0%
! TTGTATGAGCGCTGTCAAAA+GGG - chr2_3:10111780-10111799 Msa0277530:CDS 40.0%
! TCAAATGTTTGGAGCGTAGT+TGG - chr2_3:10112081-10112100 Msa0277530:intron 40.0%
! CAAATGTTTGGAGCGTAGTT+GGG - chr2_3:10112082-10112101 Msa0277530:intron 40.0%
TTGTCCAGATGACAAATTGG+CGG - chr2_3:10112121-10112140 Msa0277530:intron 40.0%
AGCCTAAACCAAAAAGTAGC+TGG - chr2_3:10112421-10112440 Msa0277530:intron 40.0%
!!! AGCCAGCTACTTTTTGGTTT+AGG + chr2_3:10112426-10112445 None:intergenic 40.0%
ACATGTATCAAGCATCAGAG+AGG + chr2_3:10112555-10112574 None:intergenic 40.0%
TGAATGGAGGTGGAAATTTC+AGG + chr2_3:10112610-10112629 None:intergenic 40.0%
GAAATTTCCACCTCCATTCA+TGG - chr2_3:10112610-10112629 Msa0277530:intron 40.0%
ATGAGACTATCCATGAATGG+AGG + chr2_3:10112623-10112642 None:intergenic 40.0%
TCCATTCATGGATAGTCTCA+TGG - chr2_3:10112622-10112641 Msa0277530:intron 40.0%
TCCATGAGACTATCCATGAA+TGG + chr2_3:10112626-10112645 None:intergenic 40.0%
ATGGATAGTCTCATGGAAAC+CGG - chr2_3:10112629-10112648 Msa0277530:intron 40.0%
TAAATACACCACAAGCCTCA+AGG + chr2_3:10112703-10112722 None:intergenic 40.0%
TTTAAGTCTCTCGTGAAACG+TGG - chr2_3:10112719-10112738 Msa0277530:intron 40.0%
TGGTCACTGGGTATGAATTA+TGG + chr2_3:10113079-10113098 None:intergenic 40.0%
TAGCAGAACAAATGGTCACT+GGG + chr2_3:10113091-10113110 None:intergenic 40.0%
ATAGCAGAACAAATGGTCAC+TGG + chr2_3:10113092-10113111 None:intergenic 40.0%
CATGACTCCTCAAACAAATC+TGG - chr2_3:10113134-10113153 Msa0277530:CDS 40.0%
! TGATGCACCAGATTTGTTTG+AGG + chr2_3:10113144-10113163 None:intergenic 40.0%
GGAAGTAATGCCACTCTAAT+TGG - chr2_3:10113204-10113223 Msa0277530:CDS 40.0%
!! GAGAGTATTGACAGGTTTCA+TGG + chr2_3:10113322-10113341 None:intergenic 40.0%
CTTGGCAATAAGAGAAACCA+TGG + chr2_3:10113367-10113386 None:intergenic 40.0%
CCAGGAAATTGTTATAGGCT+TGG + chr2_3:10113385-10113404 None:intergenic 40.0%
CCAAGCCTATAACAATTTCC+TGG - chr2_3:10113382-10113401 Msa0277530:CDS 40.0%
GTTCATGTAGGAAGCAAGTT+CGG - chr2_3:10113538-10113557 Msa0277530:CDS 40.0%
CTTTACCGTTATGCTTCTTG+AGG + chr2_3:10113609-10113628 None:intergenic 40.0%
!! TTTTATTTGACGTGAAGCCG+AGG - chr2_3:10113691-10113710 Msa0277530:CDS 40.0%
!! GACTTGTGGGTGTTGAGTTT+AGG + chr2_3:10108859-10108878 None:intergenic 45.0%
AAGAGAAGTCTTCCCTGAGA+GGG + chr2_3:10108936-10108955 None:intergenic 45.0%
! GGAGAGTTTGATTTCAGAGG+AGG + chr2_3:10108974-10108993 None:intergenic 45.0%
CGTCATCGTTATCGAGTTTG+TGG + chr2_3:10109023-10109042 None:intergenic 45.0%
!! AGGTGAAGAATTCTGGAGTG+AGG - chr2_3:10109155-10109174 Msa0277530:intron 45.0%
AGTGAAGGAGAAAGGATTGC+CGG - chr2_3:10109197-10109216 Msa0277530:intron 45.0%
GAGAAATACGTACCGTTTGG+AGG - chr2_3:10109300-10109319 Msa0277530:CDS 45.0%
!! AATGGGATTCATTTTCGGGC+AGG - chr2_3:10109405-10109424 Msa0277530:intron 45.0%
!! ATGGGATTCATTTTCGGGCA+GGG - chr2_3:10109406-10109425 Msa0277530:intron 45.0%
!! AGGATGCAGATTGGTGCTAA+GGG - chr2_3:10109450-10109469 Msa0277530:intron 45.0%
!!! GGGAATGCTGCTTTTAAGAG+TGG - chr2_3:10109600-10109619 Msa0277530:intron 45.0%
!! CTATGATTCGGTGGTCTTGT+AGG - chr2_3:10109848-10109867 Msa0277530:CDS 45.0%
ATGTCCAGTATGGTGTCCTT+TGG - chr2_3:10109969-10109988 Msa0277530:intron 45.0%
TGACTTTCCTACAGAGGACA+CGG + chr2_3:10110118-10110137 None:intergenic 45.0%
AAGTCGTGACTTTCCTACAG+AGG + chr2_3:10110124-10110143 None:intergenic 45.0%
TAACAAACGGAGATGATGCG+TGG - chr2_3:10110316-10110335 Msa0277530:intron 45.0%
TTGAAACTCAGGCCAGATTC+AGG + chr2_3:10110560-10110579 None:intergenic 45.0%
CTTAAGCTGGTTGCAGATGT+TGG - chr2_3:10110637-10110656 Msa0277530:CDS 45.0%
! ATAGTTGGTGCTCCAAATGC+AGG - chr2_3:10110661-10110680 Msa0277530:CDS 45.0%
! TAGTTGGTGCTCCAAATGCA+GGG - chr2_3:10110662-10110681 Msa0277530:CDS 45.0%
AGTGTACTCTTCCCTGCATT+TGG + chr2_3:10110676-10110695 None:intergenic 45.0%
TATTAGTGCTGCAAAGCCAG+AGG - chr2_3:10110705-10110724 Msa0277530:CDS 45.0%
! AAGGGATAATTTGCCACCTC+TGG + chr2_3:10110724-10110743 None:intergenic 45.0%
AAGGAAACAACGCCCAGATT+GGG + chr2_3:10110760-10110779 None:intergenic 45.0%
AAAGGAAACAACGCCCAGAT+TGG + chr2_3:10110761-10110780 None:intergenic 45.0%
GTTAGATCAAAAGGTCGCAG+TGG + chr2_3:10111131-10111150 None:intergenic 45.0%
! AAAGACATTCAGAGTGGGCT+GGG + chr2_3:10111325-10111344 None:intergenic 45.0%
TAAAGACATTCAGAGTGGGC+TGG + chr2_3:10111326-10111345 None:intergenic 45.0%
TCAAACTCAAGATCTGCCTG+TGG + chr2_3:10111613-10111632 None:intergenic 45.0%
AATGGCTTCTCAGCAAGTTC+AGG + chr2_3:10111667-10111686 None:intergenic 45.0%
! TCCCAGTTTTCGTATGCTTC+TGG + chr2_3:10111718-10111737 None:intergenic 45.0%
CGAAAACTGGGAATCCTTCA+AGG - chr2_3:10111726-10111745 Msa0277530:CDS 45.0%
TTGACAGCGCTCATACAAAG+AGG + chr2_3:10111778-10111797 None:intergenic 45.0%
TATGCGCTGCTTATGAGCTT+TGG - chr2_3:10111821-10111840 Msa0277530:CDS 45.0%
GAAGACAGGGAGGAATATGA+AGG - chr2_3:10111856-10111875 Msa0277530:intron 45.0%
TGTATCAAGCATCAGAGAGG+AGG + chr2_3:10112552-10112571 None:intergenic 45.0%
AGACTATCCATGAATGGAGG+TGG + chr2_3:10112620-10112639 None:intergenic 45.0%
! CACAAGCCTCAAGGACATTT+TGG + chr2_3:10112694-10112713 None:intergenic 45.0%
CAAAATGTCCTTGAGGCTTG+TGG - chr2_3:10112692-10112711 Msa0277530:intron 45.0%
GAAGGCGACAAAGTGATTGT+TGG - chr2_3:10112749-10112768 Msa0277530:intron 45.0%
CGACAAAGTGATTGTTGGAG+AGG - chr2_3:10112754-10112773 Msa0277530:intron 45.0%
CTTCATTCGTCATGCTAGCA+AGG + chr2_3:10112821-10112840 None:intergenic 45.0%
GAGTGGCATTACTTCCATTC+AGG + chr2_3:10113200-10113219 None:intergenic 45.0%
!! CTAGAAGCACCCAATTAGAG+TGG + chr2_3:10113217-10113236 None:intergenic 45.0%
CAGGTTTCATGGAGATAGCA+AGG + chr2_3:10113311-10113330 None:intergenic 45.0%
TGATGAGCAGCAGTTCATGT+AGG - chr2_3:10113526-10113545 Msa0277530:CDS 45.0%
! AGCTGCCTCAAGAAGCATAA+CGG - chr2_3:10113601-10113620 Msa0277530:CDS 45.0%
TTGTGAGCAGTTGAAGACCT+CGG + chr2_3:10113711-10113730 None:intergenic 45.0%
!!! TTATTATATTTTATATAGTT+AGG - chr2_3:10110929-10110948 Msa0277530:intron 5.0%
!! AGGAGGTTTGGATTTGGTGC+GGG + chr2_3:10108830-10108849 None:intergenic 50.0%
!! GAGGAGGTTTGGATTTGGTG+CGG + chr2_3:10108831-10108850 None:intergenic 50.0%
GAAGAGAAGTCTTCCCTGAG+AGG + chr2_3:10108937-10108956 None:intergenic 50.0%
AGAGGAGGAAGGTGAGAAAG+TGG + chr2_3:10108959-10108978 None:intergenic 50.0%
! CTTTCGCGAAGATTTTCGCC+CGG + chr2_3:10109242-10109261 None:intergenic 50.0%
GCGAAAATCTTCGCGAAAGC+CGG - chr2_3:10109243-10109262 Msa0277530:three_prime_UTR 50.0%
! GGAACGGAAGTATGGCATTC+AGG - chr2_3:10109274-10109293 Msa0277530:three_prime_UTR 50.0%
! ACGGAAGTATGGCATTCAGG+CGG - chr2_3:10109277-10109296 Msa0277530:exon 50.0%
CGGGAGAAATACGTACCGTT+TGG - chr2_3:10109297-10109316 Msa0277530:CDS 50.0%
GAGAGGTGGAAATGTGTACG+TGG - chr2_3:10109344-10109363 Msa0277530:CDS 50.0%
!! GATTCATTTTCGGGCAGGGA+GGG - chr2_3:10109410-10109429 Msa0277530:intron 50.0%
!! ATTCATTTTCGGGCAGGGAG+GGG - chr2_3:10109411-10109430 Msa0277530:intron 50.0%
!! CAGGATGCAGATTGGTGCTA+AGG - chr2_3:10109449-10109468 Msa0277530:intron 50.0%
!! GGATGCAGATTGGTGCTAAG+GGG - chr2_3:10109451-10109470 Msa0277530:intron 50.0%
!! GATGCAGATTGGTGCTAAGG+GGG - chr2_3:10109452-10109471 Msa0277530:intron 50.0%
! TGGTAGGGAGGAGGTGATTT+TGG - chr2_3:10109521-10109540 Msa0277530:intron 50.0%
!! GGAGGAGGTGATTTTGGAGA+TGG - chr2_3:10109527-10109546 Msa0277530:intron 50.0%
AACAACAACGCCTTCTGTCC+CGG + chr2_3:10109558-10109577 None:intergenic 50.0%
! TTGTTGTTGCCAGGTGGAAG+AGG - chr2_3:10109570-10109589 Msa0277530:intron 50.0%
GCTCCGAAGATTGCTGAGAA+TGG - chr2_3:10109633-10109652 Msa0277530:intron 50.0%
TATGTGTCCGTGTCCTCTGT+AGG - chr2_3:10110108-10110127 Msa0277530:intron 50.0%
ATTAGTCGCCCACCTTTGGT+GGG + chr2_3:10110402-10110421 None:intergenic 50.0%
GACCTTCCAGGTCTTCTTGA+AGG - chr2_3:10110808-10110827 Msa0277530:CDS 50.0%
CTCCTTCAAGAAGACCTGGA+AGG + chr2_3:10110813-10110832 None:intergenic 50.0%
TGTGCTCCTTCAAGAAGACC+TGG + chr2_3:10110817-10110836 None:intergenic 50.0%
!!! GCACACCGAGGTTTTGGTTT+AGG - chr2_3:10110832-10110851 Msa0277530:CDS 50.0%
!! CACTGAAAGGTGTTCTGCAC+TGG - chr2_3:10110873-10110892 Msa0277530:CDS 50.0%
!! GAAAGGTGTTCTGCACTGGT+AGG - chr2_3:10110877-10110896 Msa0277530:CDS 50.0%
AGGGTGAGAAAATGGAGGAG+CGG + chr2_3:10111525-10111544 None:intergenic 50.0%
!! CGTTGATGGTTCATCACCAC+AGG - chr2_3:10111594-10111613 Msa0277530:intron 50.0%
! ATGAGCGCTGTCAAAAGGGA+AGG - chr2_3:10111784-10111803 Msa0277530:CDS 50.0%
CCTACCGCCAATTTGTCATC+TGG + chr2_3:10112128-10112147 None:intergenic 50.0%
CCAGATGACAAATTGGCGGT+AGG - chr2_3:10112125-10112144 Msa0277530:intron 50.0%
TCTCGTGAAACGTGGCGTAA+AGG - chr2_3:10112727-10112746 Msa0277530:intron 50.0%
GTGAAACGTGGCGTAAAGGA+AGG - chr2_3:10112731-10112750 Msa0277530:intron 50.0%
GTTCCTGATGGCATGATGCA+AGG - chr2_3:10113647-10113666 Msa0277530:CDS 50.0%
!! ATTTGGTGCGGGTGGGTACA+CGG + chr2_3:10108819-10108838 None:intergenic 55.0%
!! GGTTTGGATTTGGTGCGGGT+GGG + chr2_3:10108826-10108845 None:intergenic 55.0%
!! AGGTTTGGATTTGGTGCGGG+TGG + chr2_3:10108827-10108846 None:intergenic 55.0%
CAACACCCACAAGTCCTCAC+CGG - chr2_3:10108864-10108883 Msa0277530:three_prime_UTR 55.0%
CTACACTCGTCTCCCTCTCA+GGG - chr2_3:10108921-10108940 Msa0277530:three_prime_UTR 55.0%
GAAGGAGAAAGGATTGCCGG+CGG - chr2_3:10109200-10109219 Msa0277530:intron 55.0%
TCAAAACACCGCATCACCGC+CGG + chr2_3:10109219-10109238 None:intergenic 55.0%
!!! CGGTGATGCGGTGTTTTGAC+CGG - chr2_3:10109220-10109239 Msa0277530:intron 55.0%
!!! GGTGATGCGGTGTTTTGACC+GGG - chr2_3:10109221-10109240 Msa0277530:intron 55.0%
ATCTTCGCGAAAGCCGGAGA+CGG - chr2_3:10109249-10109268 Msa0277530:three_prime_UTR 55.0%
AGACGGAGGGAACGGAAGTA+TGG - chr2_3:10109266-10109285 Msa0277530:three_prime_UTR 55.0%
! CGGAAGTATGGCATTCAGGC+GGG - chr2_3:10109278-10109297 Msa0277530:exon 55.0%
GTACCGTTTGGAGGTCCATC+CGG - chr2_3:10109309-10109328 Msa0277530:CDS 55.0%
!! GGATTCATTTTCGGGCAGGG+AGG - chr2_3:10109409-10109428 Msa0277530:intron 55.0%
GGACAAGGCAGGATGCAGAT+TGG - chr2_3:10109441-10109460 Msa0277530:intron 55.0%
GGTGATTAGGGAGGCTGGTA+GGG - chr2_3:10109506-10109525 Msa0277530:intron 55.0%
GATGGTGTATCCGGGACAGA+AGG - chr2_3:10109545-10109564 Msa0277530:intron 55.0%
!! CAGAAGGCGTTGTTGTTGCC+AGG - chr2_3:10109561-10109580 Msa0277530:intron 55.0%
!! AAGGCGTTGTTGTTGCCAGG+TGG - chr2_3:10109564-10109583 Msa0277530:intron 55.0%
TTGTTGCCAGGTGGAAGAGG+TGG - chr2_3:10109573-10109592 Msa0277530:intron 55.0%
TGTTGCCAGGTGGAAGAGGT+GGG - chr2_3:10109574-10109593 Msa0277530:intron 55.0%
! ACCTTTGGTGGGTCGGAAAC+CGG + chr2_3:10110391-10110410 None:intergenic 55.0%
GTTTCCGACCCACCAAAGGT+GGG - chr2_3:10110391-10110410 Msa0277530:intron 55.0%
! GATTAGTCGCCCACCTTTGG+TGG + chr2_3:10110403-10110422 None:intergenic 55.0%
! CCAGATTAGTCGCCCACCTT+TGG + chr2_3:10110406-10110425 None:intergenic 55.0%
CCAAAGGTGGGCGACTAATC+TGG - chr2_3:10110403-10110422 Msa0277530:intron 55.0%
! CTAATCTGGCTCGTGCGTAG+AGG - chr2_3:10110417-10110436 Msa0277530:intron 55.0%
TAGTGCTGCAAAGCCAGAGG+TGG - chr2_3:10110708-10110727 Msa0277530:CDS 55.0%
!! ATGGTAGTGGCAGACCTTCC+AGG - chr2_3:10110796-10110815 Msa0277530:CDS 55.0%
! CTTCTTGAAGGAGCACACCG+AGG - chr2_3:10110820-10110839 Msa0277530:CDS 55.0%
!! GAAGGAGCACACCGAGGTTT+TGG - chr2_3:10110826-10110845 Msa0277530:CDS 55.0%
! GTTTGGAGCGTAGTTGGGTC+TGG - chr2_3:10112087-10112106 Msa0277530:intron 55.0%
GCACCTTGCATCATGCCATC+AGG + chr2_3:10113653-10113672 None:intergenic 55.0%
GTAGCGAGGGTTGCGTGTGT+TGG + chr2_3:10108797-10108816 None:intergenic 60.0%
CGGTTCCGGTGAGGACTTGT+GGG + chr2_3:10108872-10108891 None:intergenic 60.0%
AGGGAGACGAGTGTAGGTGG+TGG + chr2_3:10108917-10108936 None:intergenic 60.0%
GAGAGGGAGACGAGTGTAGG+TGG + chr2_3:10108920-10108939 None:intergenic 60.0%
CCTGAGAGGGAGACGAGTGT+AGG + chr2_3:10108923-10108942 None:intergenic 60.0%
CCTACACTCGTCTCCCTCTC+AGG - chr2_3:10108920-10108939 Msa0277530:three_prime_UTR 60.0%
AAGGATTGCCGGCGGTGATG+CGG - chr2_3:10109208-10109227 Msa0277530:intron 60.0%
AAAGCCGGAGACGGAGGGAA+CGG - chr2_3:10109258-10109277 Msa0277530:three_prime_UTR 60.0%
ACTTCCGTTCCCTCCGTCTC+CGG + chr2_3:10109265-10109284 None:intergenic 60.0%
GGGAGGGGTTCACATGGACA+AGG - chr2_3:10109426-10109445 Msa0277530:intron 60.0%
GGGGTTCACATGGACAAGGC+AGG - chr2_3:10109430-10109449 Msa0277530:intron 60.0%
!! GCAGATTGGTGCTAAGGGGG+AGG - chr2_3:10109455-10109474 Msa0277530:intron 60.0%
! TGGTGCTAAGGGGGAGGATG+TGG - chr2_3:10109461-10109480 Msa0277530:intron 60.0%
TGCTAAGGGGGAGGATGTGG+TGG - chr2_3:10109464-10109483 Msa0277530:intron 60.0%
!! TGGTGGTGAAGGTGCCACCA+GGG - chr2_3:10109481-10109500 Msa0277530:intron 60.0%
TGCCACCAGGGACGGTGATT+AGG - chr2_3:10109493-10109512 Msa0277530:intron 60.0%
GCCACCAGGGACGGTGATTA+GGG - chr2_3:10109494-10109513 Msa0277530:intron 60.0%
TCCCTAATCACCGTCCCTGG+TGG + chr2_3:10109498-10109517 None:intergenic 60.0%
ACCAGGGACGGTGATTAGGG+AGG - chr2_3:10109497-10109516 Msa0277530:intron 60.0%
CGGTGATTAGGGAGGCTGGT+AGG - chr2_3:10109505-10109524 Msa0277530:intron 60.0%
GATTAGGGAGGCTGGTAGGG+AGG - chr2_3:10109509-10109528 Msa0277530:intron 60.0%
CAGGTGGAAGAGGTGGGAGA+GGG - chr2_3:10109580-10109599 Msa0277530:intron 60.0%
! ACCGGTTTCCGACCCACCAA+AGG - chr2_3:10110387-10110406 Msa0277530:intron 60.0%
GGTTTCCGACCCACCAAAGG+TGG - chr2_3:10110390-10110409 Msa0277530:intron 60.0%
! GTGCGTAGAGGCATGCACAC+TGG - chr2_3:10110429-10110448 Msa0277530:intron 60.0%
GGGTGGGTACACGGTAGCGA+GGG + chr2_3:10108810-10108829 None:intergenic 65.0%
GCGGTTCCGGTGAGGACTTG+TGG + chr2_3:10108873-10108892 None:intergenic 65.0%
! AGTGTAGGTGGTGGCGTCGC+CGG + chr2_3:10108908-10108927 None:intergenic 65.0%
TTCGCGAAAGCCGGAGACGG+AGG - chr2_3:10109252-10109271 Msa0277530:three_prime_UTR 65.0%
TCGCGAAAGCCGGAGACGGA+GGG - chr2_3:10109253-10109272 Msa0277530:three_prime_UTR 65.0%
CCGCCGGATGGACCTCCAAA+CGG + chr2_3:10109315-10109334 None:intergenic 65.0%
CCGTTTGGAGGTCCATCCGG+CGG - chr2_3:10109312-10109331 Msa0277530:CDS 65.0%
CGTTTGGAGGTCCATCCGGC+GGG - chr2_3:10109313-10109332 Msa0277530:CDS 65.0%
GTTTGGAGGTCCATCCGGCG+GGG - chr2_3:10109314-10109333 Msa0277530:CDS 65.0%
! GGGGGAGGATGTGGTGGTGA+AGG - chr2_3:10109470-10109489 Msa0277530:intron 65.0%
!! GTGGTGGTGAAGGTGCCACC+AGG - chr2_3:10109480-10109499 Msa0277530:intron 65.0%
!! GGTGAAGGTGCCACCAGGGA+CGG - chr2_3:10109485-10109504 Msa0277530:intron 65.0%
GCCTCCCTAATCACCGTCCC+TGG + chr2_3:10109501-10109520 None:intergenic 65.0%
GGGACGGTGATTAGGGAGGC+TGG - chr2_3:10109501-10109520 Msa0277530:intron 65.0%
TAGGGAGGCTGGTAGGGAGG+AGG - chr2_3:10109512-10109531 Msa0277530:intron 65.0%
CCTCTCCCACCTCTTCCACC+TGG + chr2_3:10109582-10109601 None:intergenic 65.0%
CCAGGTGGAAGAGGTGGGAG+AGG - chr2_3:10109579-10109598 Msa0277530:intron 65.0%
! GTCGCCCACCTTTGGTGGGT+CGG + chr2_3:10110398-10110417 None:intergenic 65.0%
CGGGTGGGTACACGGTAGCG+AGG + chr2_3:10108811-10108830 None:intergenic 70.0%
GAGGAGTGGCGGTTCCGGTG+AGG + chr2_3:10108881-10108900 None:intergenic 70.0%
GCGGAGAGGAGTGGCGGTTC+CGG + chr2_3:10108886-10108905 None:intergenic 70.0%
GAACCGCCACTCCTCTCCGC+CGG - chr2_3:10108886-10108905 Msa0277530:three_prime_UTR 70.0%
GTCCATCCGGCGGGGATGGA+GGG - chr2_3:10109322-10109341 Msa0277530:CDS 70.0%
ACCTCTCCCTCCATCCCCGC+CGG + chr2_3:10109331-10109350 None:intergenic 70.0%
CGGGCAGGGAGGGGTTCACA+TGG - chr2_3:10109420-10109439 Msa0277530:intron 70.0%
TCGCCGGCGGAGAGGAGTGG+CGG + chr2_3:10108892-10108911 None:intergenic 75.0%
! GTAGGTGGTGGCGTCGCCGG+CGG + chr2_3:10108905-10108924 None:intergenic 75.0%
GGAGGTCCATCCGGCGGGGA+TGG - chr2_3:10109318-10109337 Msa0277530:CDS 75.0%
GGTCCATCCGGCGGGGATGG+AGG - chr2_3:10109321-10109340 Msa0277530:CDS 75.0%
CTCCCTCCATCCCCGCCGGA+TGG + chr2_3:10109327-10109346 None:intergenic 75.0%
TCCGGCGGGGATGGAGGGAG+AGG - chr2_3:10109327-10109346 Msa0277530:CDS 75.0%
GGCGGGGATGGAGGGAGAGG+TGG - chr2_3:10109330-10109349 Msa0277530:CDS 75.0%
! GCGTCGCCGGCGGAGAGGAG+TGG + chr2_3:10108895-10108914 None:intergenic 80.0%
!! TGGTGGCGTCGCCGGCGGAG+AGG + chr2_3:10108900-10108919 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 10108745 10113761 10108745 ID=Msa0277530;Name=Msa0277530
chr2_3 mRNA 10108745 10113761 10108745 ID=Msa0277530-mRNA-1;Parent=Msa0277530;Name=Msa0277530-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.6|0.5|1|0.8|0.66|6|279|581
chr2_3 exon 10108745 10108970 10108745 ID=Msa0277530-mRNA-1:exon:4527;Parent=Msa0277530-mRNA-1
chr2_3 exon 10109242 10109387 10109242 ID=Msa0277530-mRNA-1:exon:4526;Parent=Msa0277530-mRNA-1
chr2_3 exon 10109731 10109912 10109731 ID=Msa0277530-mRNA-1:exon:4525;Parent=Msa0277530-mRNA-1
chr2_3 exon 10110629 10110920 10110629 ID=Msa0277530-mRNA-1:exon:4524;Parent=Msa0277530-mRNA-1
chr2_3 exon 10111612 10111871 10111612 ID=Msa0277530-mRNA-1:exon:4523;Parent=Msa0277530-mRNA-1
chr2_3 exon 10112843 10113761 10112843 ID=Msa0277530-mRNA-1:exon:4522;Parent=Msa0277530-mRNA-1
chr2_3 CDS 10112843 10113761 10112843 ID=Msa0277530-mRNA-1:cds;Parent=Msa0277530-mRNA-1
chr2_3 CDS 10111612 10111871 10111612 ID=Msa0277530-mRNA-1:cds;Parent=Msa0277530-mRNA-1
chr2_3 CDS 10110629 10110920 10110629 ID=Msa0277530-mRNA-1:cds;Parent=Msa0277530-mRNA-1
chr2_3 CDS 10109731 10109912 10109731 ID=Msa0277530-mRNA-1:cds;Parent=Msa0277530-mRNA-1
chr2_3 CDS 10109295 10109387 10109295 ID=Msa0277530-mRNA-1:cds;Parent=Msa0277530-mRNA-1
chr2_3 three_prime_UTR 10109242 10109294 10109242 ID=Msa0277530-mRNA-1:three_prime_utr;Parent=Msa0277530-mRNA-1
chr2_3 three_prime_UTR 10108745 10108970 10108745 ID=Msa0277530-mRNA-1:three_prime_utr;Parent=Msa0277530-mRNA-1
Gene Sequence

>Msa0277530

ATGGTAACTTCAATCTCACCATGGTTCTCTCCCATTTCTATATCTTGTTCCAACACACGCAACCCTCGCTACCGTGTACCCACCCGCACCAAATCCAAACCTCCTCCAAATCCTAAACTCAACACCCACAAGTCCTCACCGGAACCGCCACTCCTCTCCGCCGGCGACGCCACCACCTACACTCGTCTCCCTCTCAGGGAAGACTTCTCTTCCACTTTCTCACCTTCCTCCTCTGAAATCAAACTCTCCGAATCAACACCAATTCACCAATTGCTCCACAAACTCGATAACGATGACGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATCAATGGTAATTTTGAAGGAATTGGTGAGTCTGAAGATGATGAAGAATTGGGGTTTATGGATGAGGAGATTGAAGAAGGTGAAGAATTCTGGAGTGAGGAAACTGAAGAAGAAGAAGAAGTGAAGGAGAAAGGATTGCCGGCGGTGATGCGGTGTTTTGACCGGGCGAAAATCTTCGCGAAAGCCGGAGACGGAGGGAACGGAAGTATGGCATTCAGGCGGGAGAAATACGTACCGTTTGGAGGTCCATCCGGCGGGGATGGAGGGAGAGGTGGAAATGTGTACGTGGAAGTTGATAAAGCGATGAATTCGTTGTTACCGTTTAGGAATGGGATTCATTTTCGGGCAGGGAGGGGTTCACATGGACAAGGCAGGATGCAGATTGGTGCTAAGGGGGAGGATGTGGTGGTGAAGGTGCCACCAGGGACGGTGATTAGGGAGGCTGGTAGGGAGGAGGTGATTTTGGAGATGGTGTATCCGGGACAGAAGGCGTTGTTGTTGCCAGGTGGAAGAGGTGGGAGAGGGAATGCTGCTTTTAAGAGTGGGAGTAATAAAGCTCCGAAGATTGCTGAGAATGGTGAACAAGAACTTAAGCTGGTTGCAGATGTTGGTATAGTTGGTGCTCCAAATGCAGGGAAGAGTACACTTTTGAGTGTTATTAGTGCTGCAAAGCCAGAGGTGGCAAATTATCCCTTTACAACTTTGCTTCCCAATCTGGGCGTTGTTTCCTTTGACTACGATTCAACTATGGTAGTGGCAGACCTTCCAGGTCTTCTTGAAGGAGCACACCGAGGTTTTGGTTTAGGTCATGAATTTCTGCGACACACTGAAAGGTGTTCTGCACTGATACATGTCGTTGATGGTTCATCACCACAGGCAGATCTTGAGTTTGATGCAGTTCGTCTAGAACTGAAGCTATTTAATCCTGAACTTGCTGAGAAGCCATTTATAGTTGCTTATAACAAAATGGATCTTCCAGAAGCATACGAAAACTGGGAATCCTTCAAGGAAAAGTTGCAATCTCATGGGATCACGCCTCTTTGTATGAGCGCTGTCAAAAGGGAAGGTACTCATGAAGTTATATGCGCTGCTTATGAGCTTTGGCGTAAAAATAAAGAAGACAGGGAGGAATATGAAGGACTAGAATTATGCCTGAAATTTCCACCTCCATTCATGGATAGTCTCATGGAAACCGGTGAATCTTTTAACAGGTACGTTGATTCCGAGAAAAGATTCCAAAATGTCCTTGAGGCTTGTGGTGTATTTAAGTCTCTCGTGAAACGTGGCGTAAAGGAAGGCGACAAAGTGATTGTTGGAGAGATGGAGATGATATGGCATGACTCCTCAAACAAATCTGGTGCATCAAAGATGAAGATGTCCACAGATTCAATTAAATGGCCTGAATGGAAGTAA
Protein sequence

>Msa0277530

MVTSISPWFSPISISCSNTRNPRYRVPTRTKSKPPPNPKLNTHKSSPEPPLLSAGDATTYTRLPLREDFSSTFSPSSSEIKLSESTPIHQLLHKLDNDDDEEEEEEEEEEEINGNFEGIGESEDDEELGFMDEEIEEGEEFWSEETEEEEEVKEKGLPAVMRCFDRAKIFAKAGDGGNGSMAFRREKYVPFGGPSGGDGGRGGNVYVEVDKAMNSLLPFRNGIHFRAGRGSHGQGRMQIGAKGEDVVVKVPPGTVIREAGREEVILEMVYPGQKALLLPGGRGGRGNAAFKSGSNKAPKIAENGEQELKLVADVGIVGAPNAGKSTLLSVISAAKPEVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALIHVVDGSSPQADLEFDAVRLELKLFNPELAEKPFIVAYNKMDLPEAYENWESFKEKLQSHGITPLCMSAVKREGTHEVICAAYELWRKNKEDREEYEGLELCLKFPPPFMDSLMETGESFNRYVDSEKRFQNVLEACGVFKSLVKRGVKEGDKVIVGEMEMIWHDSSNKSGASKMKMSTDSIKWPEWK*