AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1339020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1339020 MtrunA17_Chr4g0031821 96.654 807 27 0 1 807 1 807 0.0 1609
Msa1339020 MtrunA17_Chr7g0260601 73.217 687 135 7 117 766 14 688 0.0 986
Msa1339020 MtrunA17_Chr7g0248361 72.377 648 144 9 126 766 23 642 0.0 916
Msa1339020 MtrunA17_Chr6g0476861 68.996 687 155 9 126 794 28 674 0.0 911
Msa1339020 MtrunA17_Chr1g0168321 63.986 572 114 7 126 696 23 503 0.0 692
Msa1339020 MtrunA17_Chr3g0094871 75.664 452 92 4 312 760 3 439 0.0 692
Msa1339020 MtrunA17_Chr3g0143721 48.673 452 214 6 320 757 249 696 5.71e-141 432
Msa1339020 MtrunA17_Chr2g0297281 47.505 461 225 9 320 770 286 739 4.25e-132 411
Msa1339020 MtrunA17_Chr4g0052411 48.230 452 216 9 320 759 229 674 2.15e-131 407
Msa1339020 MtrunA17_Chr7g0217421 53.803 355 156 6 320 671 39 388 1.17e-122 374
Msa1339020 MtrunA17_Chr5g0429571 45.175 456 228 10 293 728 284 737 6.45e-112 359
Msa1339020 MtrunA17_Chr3g0135721 42.516 461 243 9 311 761 215 663 8.71e-112 356
Msa1339020 MtrunA17_Chr3g0135761 42.333 463 243 9 312 767 218 663 1.20e-109 350
Msa1339020 MtrunA17_Chr1g0158881 40.900 511 277 9 254 757 262 754 2.16e-109 352
Msa1339020 MtrunA17_Chr8g0362771 39.490 471 266 7 304 767 221 679 4.29e-107 344
Msa1339020 MtrunA17_Chr3g0104211 44.651 430 218 6 320 731 304 731 4.04e-106 343
Msa1339020 MtrunA17_Chr5g0432631 40.541 481 257 10 275 748 194 652 1.82e-102 336
Msa1339020 MtrunA17_Chr5g0432641 39.238 446 250 9 311 748 182 614 1.65e-90 298
Msa1339020 MtrunA17_Chr8g0388371 34.861 502 274 11 302 761 389 879 3.34e-80 276
Msa1339020 MtrunA17_Chr6g0456351 50.000 272 132 1 311 582 308 575 1.68e-78 265
Msa1339020 MtrunA17_Chr2g0331161 39.732 448 242 11 320 757 415 844 1.72e-78 271
Msa1339020 MtrunA17_Chr3g0129971 34.227 485 282 11 303 768 279 745 2.33e-69 245
Msa1339020 MtrunA17_Chr4g0050561 40.078 257 151 2 325 580 161 415 4.93e-55 195
Msa1339020 MtrunA17_Chr8g0345461 40.377 265 154 3 309 572 154 415 7.33e-55 195
Msa1339020 MtrunA17_Chr1g0182711 43.725 247 135 3 322 567 190 433 7.49e-55 196
Msa1339020 MtrunA17_Chr7g0262801 43.725 247 135 3 322 567 189 432 3.21e-54 194
Msa1339020 MtrunA17_Chr3g0135781 51.099 182 79 2 304 482 39 213 1.72e-53 184
Msa1339020 MtrunA17_Chr1g0200081 40.000 265 154 4 309 572 164 424 1.24e-52 189
Msa1339020 MtrunA17_Chr8g0392981 73.950 119 29 1 642 758 1 119 1.02e-51 176
Msa1339020 MtrunA17_Chr8g0392971 82.353 102 18 0 532 633 51 152 2.40e-51 176
Msa1339020 MtrunA17_Chr1g0192151 40.329 243 141 3 322 563 169 408 3.82e-51 185
Msa1339020 MtrunA17_Chr4g0014731 40.329 243 141 3 322 563 170 409 5.15e-51 184
Msa1339020 MtrunA17_Chr8g0357301 29.006 493 278 15 337 778 487 958 4.21e-50 190
Msa1339020 MtrunA17_Chr7g0255721 41.434 251 140 4 319 566 684 930 3.44e-49 187
Msa1339020 MtrunA17_Chr7g0255721 40.092 217 123 3 351 566 416 626 3.64e-31 131
Msa1339020 MtrunA17_Chr5g0432391 30.493 446 230 12 312 748 48 422 9.03e-49 178
Msa1339020 MtrunA17_Chr7g0255641 39.764 254 140 5 319 566 657 903 4.09e-48 184
Msa1339020 MtrunA17_Chr7g0255641 40.513 195 107 5 358 551 432 618 1.93e-29 125
Msa1339020 MtrunA17_Chr3g0108321 43.137 204 114 2 305 507 144 346 1.14e-47 173
Msa1339020 MtrunA17_Chr2g0327121 42.975 242 129 4 309 548 196 430 1.58e-47 181
Msa1339020 MtrunA17_Chr2g0327121 42.735 234 122 5 320 548 480 706 3.10e-46 177
Msa1339020 MtrunA17_Chr7g0255651 41.558 231 131 3 319 548 281 508 8.41e-47 176
Msa1339020 MtrunA17_Chr7g0255651 30.317 221 135 5 339 548 29 241 5.29e-19 91.7
Msa1339020 MtrunA17_Chr1g0180791 42.424 231 127 4 320 548 478 704 1.03e-46 179
Msa1339020 MtrunA17_Chr1g0180791 42.149 242 131 4 309 548 194 428 4.40e-46 177
Msa1339020 MtrunA17_Chr3g0145011 39.113 248 147 3 320 566 139 383 1.38e-46 171
Msa1339020 MtrunA17_Chr7g0264521 42.358 229 126 4 322 548 481 705 1.67e-46 178
Msa1339020 MtrunA17_Chr7g0264521 41.494 241 134 4 309 548 195 429 8.79e-46 176
Msa1339020 MtrunA17_Chr3g0141901 39.113 248 147 3 320 566 136 380 2.01e-46 171
Msa1339020 MtrunA17_Chr2g0277831 41.880 234 120 4 322 548 245 469 8.14e-41 161
Msa1339020 MtrunA17_Chr2g0277831 39.035 228 134 3 320 546 533 756 1.22e-40 160
Msa1339020 MtrunA17_Chr7g0255691 38.462 247 146 4 319 562 285 528 8.08e-40 155
Msa1339020 MtrunA17_Chr7g0255691 35.000 260 133 9 325 562 22 267 1.00e-26 115
Msa1339020 MtrunA17_Chr7g0255901 36.797 231 141 4 320 548 639 866 6.42e-39 155
Msa1339020 MtrunA17_Chr2g0321241 41.410 227 119 8 317 539 129 345 1.31e-36 143
Msa1339020 MtrunA17_Chr4g0026631 41.410 227 119 8 317 539 124 340 2.21e-36 142
Msa1339020 MtrunA17_Chr8g0387641 36.207 232 138 5 320 548 521 745 5.05e-36 146
Msa1339020 MtrunA17_Chr4g0033451 32.951 349 206 9 235 566 292 629 6.05e-36 147
Msa1339020 MtrunA17_Chr4g0043381 35.398 226 139 4 322 546 839 1058 4.20e-35 144
Msa1339020 MtrunA17_Chr1g0190401 22.807 570 354 9 270 756 606 1172 5.51e-35 144
Msa1339020 MtrunA17_Chr3g0086411 35.897 273 145 7 320 566 215 483 9.95e-35 139
Msa1339020 MtrunA17_Chr3g0086411 36.667 150 78 3 407 546 7 149 4.07e-18 88.6
Msa1339020 MtrunA17_Chr3g0086401 34.146 287 151 7 320 575 385 664 4.53e-34 139
Msa1339020 MtrunA17_Chr3g0086401 35.841 226 123 5 322 535 94 309 1.47e-31 131
Msa1339020 MtrunA17_Chr6g0462581 36.638 232 136 6 320 548 500 723 6.08e-34 139
Msa1339020 MtrunA17_Chr3g0135791 31.557 244 161 4 527 767 19 259 6.66e-34 132
Msa1339020 MtrunA17_Chr4g0004121 33.535 331 184 11 290 593 208 529 9.26e-34 136
Msa1339020 MtrunA17_Chr2g0327231 43.195 169 92 3 314 480 340 506 1.43e-33 135
Msa1339020 MtrunA17_Chr2g0327231 37.000 100 60 1 309 408 142 238 4.17e-12 69.3
Msa1339020 MtrunA17_Chr4g0038101 35.931 231 131 7 320 543 721 941 3.53e-33 137
Msa1339020 MtrunA17_Chr5g0397121 35.345 232 140 5 320 548 513 737 4.79e-33 137
Msa1339020 MtrunA17_Chr1g0204031 36.752 234 136 7 319 548 556 781 7.14e-32 133
Msa1339020 MtrunA17_Chr4g0052271 37.975 237 138 7 320 554 119 348 7.20e-32 129
Msa1339020 MtrunA17_Chr2g0316851 32.946 258 160 5 299 548 571 823 7.85e-32 134
Msa1339020 MtrunA17_Chr1g0202371 36.957 230 128 8 320 543 397 615 1.26e-31 132
Msa1339020 MtrunA17_Chr1g0195731 36.052 233 138 6 320 548 934 1159 2.74e-31 132
Msa1339020 MtrunA17_Chr3g0127401 36.402 239 128 9 320 548 81 305 5.98e-31 125
Msa1339020 MtrunA17_Chr3g0127431 34.728 239 132 9 320 548 84 308 7.35e-31 125
Msa1339020 MtrunA17_Chr1g0202381 35.371 229 136 6 319 543 467 687 7.79e-31 130
Msa1339020 MtrunA17_Chr1g0195741 35.622 233 139 6 320 548 938 1163 9.15e-31 130
Msa1339020 MtrunA17_Chr4g0047411 36.546 249 128 7 345 567 202 446 4.78e-30 127
Msa1339020 MtrunA17_Chr3g0116131 35.526 228 136 6 320 543 902 1122 7.53e-30 127
Msa1339020 MtrunA17_Chr6g0459561 35.391 243 141 7 308 544 370 602 4.42e-28 120
Msa1339020 MtrunA17_Chr7g0246111 33.333 243 129 8 320 548 212 435 6.67e-28 118
Msa1339020 MtrunA17_Chr6g0459541 30.389 283 161 8 292 544 11 287 1.23e-25 109
Msa1339020 MtrunA17_Chr2g0289231 32.510 243 131 8 316 542 293 518 2.26e-23 105
Msa1339020 MtrunA17_Chr6g0459551 33.906 233 134 10 292 515 71 292 1.23e-20 95.5
Msa1339020 MtrunA17_Chr3g0135741 36.508 126 78 2 523 647 13 137 2.53e-17 79.7
Msa1339020 MtrunA17_Chr5g0432671 39.048 105 59 2 523 627 3 102 2.95e-15 72.4
Msa1339020 MtrunA17_Chr6g0459531 27.099 262 145 10 292 544 36 260 9.41e-14 73.2
Msa1339020 MtrunA17_Chr4g0062081 42.857 77 42 2 324 398 11 87 2.42e-13 66.6
Msa1339020 MtrunA17_Chr5g0404651 32.292 192 111 8 315 498 209 389 1.86e-11 67.4
Msa1339020 MtrunA17_Chr2g0316041 29.730 185 115 6 330 507 150 326 4.06e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1339020 AT1G07510.1 73.659 820 196 8 1 807 1 813 0.0 1182
Msa1339020 AT2G29080.1 73.049 820 194 13 1 807 4 809 0.0 1137
Msa1339020 AT1G50250.1 48.894 452 213 7 320 757 259 706 1.81e-140 432
Msa1339020 AT5G42270.1 48.009 452 217 6 320 757 247 694 1.00e-136 422
Msa1339020 AT1G06430.1 48.156 461 220 10 320 769 217 669 2.30e-132 410
Msa1339020 AT1G06430.3 48.156 461 220 10 320 769 217 669 2.30e-132 410
Msa1339020 AT1G06430.2 48.156 461 220 10 320 769 217 669 2.30e-132 410
Msa1339020 AT2G30950.4 47.722 461 222 10 320 769 228 680 1.94e-131 408
Msa1339020 AT2G30950.1 47.722 461 222 10 320 769 224 676 2.44e-131 407
Msa1339020 AT2G30950.2 47.722 461 222 10 320 769 224 676 2.44e-131 407
Msa1339020 AT2G30950.3 47.722 461 222 10 320 769 224 676 2.44e-131 407
Msa1339020 AT5G15250.1 47.095 482 233 12 302 771 204 675 1.03e-130 405
Msa1339020 AT2G26140.1 44.796 442 224 8 312 748 220 646 1.83e-113 361
Msa1339020 AT5G53170.1 42.315 501 270 9 261 757 299 784 6.45e-113 362
Msa1339020 AT5G58870.1 46.512 430 213 6 320 733 326 754 1.29e-112 362
Msa1339020 AT3G47060.1 46.279 430 214 7 320 733 322 750 6.84e-111 357
Msa1339020 AT5G15250.2 51.266 316 126 5 302 594 204 514 3.04e-98 315
Msa1339020 AT3G02450.1 51.724 261 121 2 314 573 324 580 1.12e-78 266
Msa1339020 AT4G23940.1 34.200 500 280 10 302 761 412 902 2.39e-76 266
Msa1339020 AT3G16290.1 37.778 450 253 10 320 758 407 840 1.08e-73 258
Msa1339020 AT5G64580.1 30.243 701 421 19 109 768 90 763 4.86e-70 248
Msa1339020 AT5G19990.2 40.467 257 150 2 325 580 105 359 6.83e-55 194
Msa1339020 AT5G19990.1 40.467 257 150 2 325 580 163 417 1.25e-54 195
Msa1339020 AT5G19990.3 40.467 257 150 2 325 580 163 417 1.25e-54 195
Msa1339020 AT1G53750.1 40.377 265 154 3 309 572 154 415 1.35e-54 195
Msa1339020 AT4G29040.1 43.725 247 135 3 322 567 187 430 1.35e-54 195
Msa1339020 AT5G20000.1 40.467 257 150 2 325 580 163 417 1.73e-54 194
Msa1339020 AT2G20140.1 43.725 247 135 3 322 567 187 430 6.82e-54 193
Msa1339020 AT1G53780.1 39.623 265 156 3 309 572 326 587 5.91e-53 194
Msa1339020 AT1G53780.4 39.623 265 156 3 309 572 326 587 5.91e-53 194
Msa1339020 AT1G53780.3 39.623 265 156 3 309 572 325 586 6.28e-53 194
Msa1339020 AT1G53780.2 39.623 265 156 3 309 572 347 608 6.78e-53 195
Msa1339020 AT5G58290.1 38.911 257 153 3 305 560 137 390 4.31e-52 187
Msa1339020 AT3G05530.1 41.152 243 139 3 322 563 170 409 4.40e-52 187
Msa1339020 AT1G09100.1 40.741 243 140 3 322 563 169 408 4.47e-52 187
Msa1339020 AT1G79560.1 27.728 559 347 14 268 781 439 985 1.77e-51 195
Msa1339020 AT1G79560.2 27.536 552 347 13 268 778 439 978 2.62e-51 194
Msa1339020 AT3G56690.1 40.637 251 142 4 319 566 720 966 4.17e-50 191
Msa1339020 AT3G56690.1 41.206 199 110 3 351 548 413 605 1.05e-34 143
Msa1339020 AT1G79560.3 28.261 506 317 12 268 739 439 932 5.21e-50 190
Msa1339020 AT5G03340.1 41.991 231 128 4 320 548 477 703 6.05e-47 180
Msa1339020 AT5G03340.1 41.085 258 141 5 309 564 193 441 8.23e-46 177
Msa1339020 AT3G53230.1 42.424 231 127 4 320 548 478 704 7.38e-47 180
Msa1339020 AT3G53230.1 40.316 253 144 4 309 560 194 440 2.16e-45 175
Msa1339020 AT5G43010.1 38.710 248 148 3 320 566 136 380 1.65e-46 171
Msa1339020 AT1G45000.1 38.710 248 148 3 320 566 136 380 2.21e-46 171
Msa1339020 AT3G09840.1 41.085 258 141 5 309 564 193 441 1.09e-45 176
Msa1339020 AT3G09840.1 41.304 230 132 2 320 548 477 704 1.44e-45 176
Msa1339020 AT3G01610.2 41.810 232 112 6 322 539 232 454 8.52e-40 158
Msa1339020 AT3G01610.2 34.828 290 165 7 303 575 508 790 1.69e-34 142
Msa1339020 AT3G01610.1 41.810 232 112 6 322 539 232 454 9.44e-40 158
Msa1339020 AT3G01610.1 34.828 290 165 7 303 575 508 790 1.60e-34 142
Msa1339020 AT2G03670.1 36.032 247 153 3 319 562 282 526 4.00e-38 151
Msa1339020 AT2G03670.1 30.719 306 186 8 324 612 23 319 3.62e-31 130
Msa1339020 AT1G03000.1 37.069 232 139 5 320 548 655 882 1.54e-37 152
Msa1339020 AT1G05910.1 34.459 296 179 6 288 576 348 635 1.65e-37 152
Msa1339020 AT1G64110.5 34.843 287 172 7 320 598 516 795 8.66e-37 149
Msa1339020 AT1G64110.3 34.843 287 172 7 320 598 516 795 8.66e-37 149
Msa1339020 AT1G64110.2 34.843 287 172 7 320 598 518 797 9.44e-37 149
Msa1339020 AT1G64110.4 34.843 287 172 7 320 598 518 797 9.44e-37 149
Msa1339020 AT1G64110.1 34.843 287 172 7 320 598 513 792 1.06e-36 149
Msa1339020 AT5G08470.1 36.481 233 127 6 322 546 843 1062 3.98e-35 144
Msa1339020 AT5G08470.3 36.481 233 127 6 322 546 834 1053 4.20e-35 144
Msa1339020 AT4G28000.2 35.776 232 138 5 320 548 517 740 8.12e-35 143
Msa1339020 AT4G28000.3 35.776 232 138 5 320 548 517 740 8.45e-35 142
Msa1339020 AT4G28000.1 35.776 232 138 5 320 548 515 738 8.90e-35 142
Msa1339020 AT3G04340.1 40.415 193 112 3 314 504 774 965 1.93e-34 142
Msa1339020 AT2G27600.1 39.474 228 122 9 317 539 126 342 9.50e-34 135
Msa1339020 AT5G52882.1 35.776 232 138 5 320 548 514 737 1.34e-33 139
Msa1339020 AT3G15120.2 36.910 233 132 5 322 546 728 953 3.76e-33 139
Msa1339020 AT3G15120.1 36.910 233 132 5 322 546 718 943 3.92e-33 139
Msa1339020 AT4G02480.1 31.126 302 171 7 320 591 960 1254 8.48e-33 137
Msa1339020 AT1G80350.1 36.364 275 138 10 320 566 236 501 3.56e-32 132
Msa1339020 AT2G03670.2 30.719 306 186 8 324 612 23 319 8.21e-32 129
Msa1339020 AT2G03670.2 39.286 140 84 1 319 457 282 421 2.12e-19 92.4
Msa1339020 AT5G53540.1 36.864 236 131 8 320 548 84 308 1.03e-31 129
Msa1339020 AT1G50140.2 35.931 231 131 7 320 543 689 909 1.12e-30 130
Msa1339020 AT1G50140.5 35.931 231 131 7 320 543 689 909 1.12e-30 130
Msa1339020 AT1G50140.3 35.931 231 131 7 320 543 711 931 1.31e-30 130
Msa1339020 AT1G50140.1 35.931 231 131 7 320 543 711 931 1.31e-30 130
Msa1339020 AT1G50140.4 35.931 231 131 7 320 543 711 931 1.31e-30 130
Msa1339020 AT2G45500.4 34.000 250 140 9 308 548 70 303 1.66e-30 124
Msa1339020 AT2G45500.3 34.000 250 140 9 308 548 70 303 1.66e-30 124
Msa1339020 AT1G02890.1 29.801 302 175 7 320 591 941 1235 2.57e-30 129
Msa1339020 AT3G19740.1 35.965 228 135 7 320 543 701 921 6.92e-30 127
Msa1339020 AT2G45500.2 34.000 250 140 9 308 548 203 436 7.24e-30 124
Msa1339020 AT4G27680.1 36.017 236 133 8 320 548 81 305 8.28e-30 123
Msa1339020 AT2G45500.1 34.000 250 140 9 308 548 207 440 9.02e-30 124
Msa1339020 AT2G45500.5 34.000 250 140 9 308 548 213 446 1.02e-29 124
Msa1339020 AT2G34560.1 37.662 231 136 7 320 548 100 324 2.28e-29 121
Msa1339020 AT2G34560.2 37.662 231 136 7 320 548 109 333 3.16e-29 121
Msa1339020 AT4G04910.1 37.288 236 122 8 345 564 239 464 9.42e-29 123
Msa1339020 AT3G27120.1 34.979 243 142 7 308 544 388 620 1.86e-27 119
Msa1339020 AT4G24860.3 34.211 228 139 6 320 543 815 1035 3.48e-27 119
Msa1339020 AT4G24860.4 34.211 228 139 6 320 543 790 1010 3.66e-27 119
Msa1339020 AT4G24860.1 34.211 228 139 6 320 543 817 1037 3.73e-27 119
Msa1339020 AT4G24860.2 34.211 228 139 6 320 543 813 1033 3.85e-27 119
Msa1339020 AT4G04180.2 29.316 307 169 10 261 542 249 532 9.20e-26 113
Msa1339020 AT4G04180.1 29.316 307 169 10 261 542 254 537 9.96e-26 113
Msa1339020 AT1G62130.1 32.035 231 128 7 320 543 750 958 1.27e-23 107
Msa1339020 AT1G62130.2 32.035 231 128 7 320 543 743 951 1.38e-23 107
Msa1339020 AT1G45000.2 40.288 139 81 2 320 457 136 273 8.24e-23 100
Msa1339020 AT5G08470.2 35.526 152 87 4 322 469 843 987 1.71e-19 94.7
Msa1339020 AT1G02890.2 26.490 302 157 8 320 591 941 1207 2.18e-19 94.4
Msa1339020 AT5G17760.1 31.148 183 96 7 322 489 218 385 1.59e-11 68.2

Find 218 sgRNAs with CRISPR-Local

Find 422 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGGAACTCTCTGGTTTA+TGG 0.154517 tig0003001:+3105 Msa1339020:CDS
GCAAGATTGGGAACGCTTTA+TGG 0.172434 tig0003001:+540 Msa1339020:CDS
TGCGCCAGCCCTGTTGATTT+TGG 0.182881 tig0003001:+3087 Msa1339020:CDS
GTGCCATTTCTTTCCATATC+TGG 0.205745 tig0003001:+3616 Msa1339020:CDS
CAGGGTGAGAAACTTGTTTC+TGG 0.216719 tig0003001:+3678 Msa1339020:CDS
TTTAAATATGTAATCAATAT+TGG 0.218480 tig0003001:+2941 Msa1339020:CDS
TGAAACCATAGATGGCTATT+TGG 0.222849 tig0003001:-5229 None:intergenic
CCAAGCTCTTCGTATTTCTT+AGG 0.226217 tig0003001:-3505 None:intergenic
TATTGATTACATATTTAAAT+TGG 0.233644 tig0003001:-2937 None:intergenic
CATATCTGGTTCTGATTTCA+TGG 0.234533 tig0003001:+3630 Msa1339020:CDS
CTTCGCTGTCTGCTTGATTA+AGG 0.241757 tig0003001:-2880 None:intergenic
CTCATCAATAAATACTATAC+TGG 0.248136 tig0003001:-3719 None:intergenic
TGCTGTTGCAGGTTGGTTCT+TGG 0.252343 tig0003001:+4716 Msa1339020:CDS
CAGGACAAAGGAGCAGCTTT+TGG 0.256747 tig0003001:+4830 Msa1339020:CDS
TTCTCTGCAGATTAGTTTCC+AGG 0.261767 tig0003001:+2766 Msa1339020:intron
TTTATCGATGATGTTGAAAA+TGG 0.267533 tig0003001:+582 Msa1339020:CDS
AGAGTTCCTCACATATATTT+TGG 0.268782 tig0003001:-2855 None:intergenic
CTCAAAATGACGACGCGTTT+GGG 0.272158 tig0003001:+5279 Msa1339020:CDS
CCTCAAAATGACGACGCGTT+TGG 0.275529 tig0003001:+5278 Msa1339020:CDS
GATGATGTTGAAAATGGATT+AGG 0.287741 tig0003001:+588 Msa1339020:CDS
TCAAATAAATCTGAAATATC+TGG 0.292729 tig0003001:-3972 None:intergenic
AGATGACTTGGTTCGAATCT+TGG 0.302830 tig0003001:+5457 Msa1339020:CDS
TTTGAAGAAACAATGGTAAC+TGG 0.318302 tig0003001:-364 None:intergenic
ATTGATGTACCTGACATTAA+AGG 0.319955 tig0003001:+3943 Msa1339020:CDS
TTAAATCTATCGTAATTTGT+AGG 0.322847 tig0003001:-5506 None:intergenic
CGAGGCAAAGCAAGAAATTA+TGG 0.326964 tig0003001:+3459 Msa1339020:CDS
AGGAAAGTGCAAGGTGGATT+TGG 0.333587 tig0003001:+3130 Msa1339020:CDS
CATGAAATCAGAACCAGATA+TGG 0.334227 tig0003001:-3629 None:intergenic
ATGATGTTGAAAATGGATTA+GGG 0.334363 tig0003001:+589 Msa1339020:CDS
TTGGGAACTCTCTGGTTTAT+GGG 0.337589 tig0003001:+3106 Msa1339020:CDS
AAATCAATTGTTGGTGGAAA+TGG 0.339562 tig0003001:+3813 Msa1339020:CDS
AATTCCAAAAGGTGCTCTTC+TGG 0.340894 tig0003001:+3534 Msa1339020:CDS
TGGTGGTCGGGCTGCCGAGC+AGG 0.341124 tig0003001:+4872 Msa1339020:CDS
GCCCTTACTCCAGGATTTGC+TGG 0.341796 tig0003001:+4045 Msa1339020:CDS
CCTTTGCAGGAAGGGTTCCT+TGG 0.342572 tig0003001:-2904 None:intergenic
TCTGCCATAGCTCGTAATAA+TGG 0.355581 tig0003001:+633 Msa1339020:CDS
CGATAGGATCATTGGTGGTT+TGG 0.356353 tig0003001:+4161 Msa1339020:CDS
GAAACCATAGATGGCTATTT+GGG 0.358295 tig0003001:-5228 None:intergenic
CTGCCATAGCTCGTAATAAT+GGG 0.361252 tig0003001:+634 Msa1339020:CDS
GATGACTTGGTTCGAATCTT+GGG 0.367294 tig0003001:+5458 Msa1339020:CDS
TTGATCAGGAAGTGCGAGAT+TGG 0.371100 tig0003001:+5333 Msa1339020:CDS
CAACAGCATGGCCTGCTTCA+TGG 0.372235 tig0003001:-4701 None:intergenic
TGGCCACCAGATCCCTTTGC+AGG 0.378325 tig0003001:-2917 None:intergenic
CCTCGCGGCACAGCAGCACT+TGG 0.379585 tig0003001:+4774 Msa1339020:CDS
GAAATAGACTTTGATTAGCT+TGG 0.380375 tig0003001:-5768 None:intergenic
TTTCTTTCATCCCTTTCTCT+TGG 0.380958 tig0003001:+1386 Msa1339020:CDS
TGTTATATATTCTTCTGAAA+TGG 0.383217 tig0003001:+3039 Msa1339020:CDS
GTTGCACGGTGAAGCAAGAT+TGG 0.387025 tig0003001:+527 Msa1339020:CDS
GGTTCTCACTAGGAACATAT+TGG 0.390805 tig0003001:-4803 None:intergenic
TATATTCTTCTGAAATGGTT+TGG 0.391866 tig0003001:+3044 Msa1339020:CDS
TTCGCTGTCTGCTTGATTAA+GGG 0.399007 tig0003001:-2879 None:intergenic
AAAGCAACTGCAGGGGAGTC+TGG 0.399715 tig0003001:+3592 Msa1339020:CDS
ACCCTTCCTGCAAAGGGATC+TGG 0.404556 tig0003001:+2911 Msa1339020:CDS
TATGCCCAAATAGCCATCTA+TGG 0.410083 tig0003001:+5224 Msa1339020:CDS
TGTAGGTTCTGCACTCTTGA+AGG 0.411267 tig0003001:-5489 None:intergenic
TTGATGCAATTGGTCGGAAA+AGG 0.411767 tig0003001:+3743 Msa1339020:CDS
CCCACCAGAAGAGCACCTTT+TGG 0.413587 tig0003001:-3538 None:intergenic
AGGGGTCGTGGAGGTTTCTC+TGG 0.415439 tig0003001:+3763 Msa1339020:CDS
AGAGAGTTCCCAAAATCAAC+AGG 0.415902 tig0003001:-3096 None:intergenic
AAACTATCTCACCCCATTGT+TGG 0.420910 tig0003001:+1352 Msa1339020:CDS
GTGTTCTTCTATAAGCTGTA+TGG 0.421606 tig0003001:-5378 None:intergenic
AAACCATACAGCGGCGATAC+TGG 0.423477 tig0003001:+5302 Msa1339020:CDS
AACTATGTGGGAACAACCTC+AGG 0.425530 tig0003001:-5611 None:intergenic
TTGTATGACCCTTGGTGGTC+GGG 0.425818 tig0003001:+4860 Msa1339020:CDS
TTCTGAAATGGTTTGGTACC+AGG 0.426278 tig0003001:+3051 Msa1339020:CDS
GGTGGATTTGGTGTTGGTGG+TGG 0.427309 tig0003001:+3142 Msa1339020:CDS
CAAGGTGGATTTGGTGTTGG+TGG 0.428799 tig0003001:+3139 Msa1339020:CDS
GAAGCAGGCCATGCTGTTGC+AGG 0.430567 tig0003001:+4705 Msa1339020:CDS
TGGTGATATTTGTAGTTGTC+GGG 0.442556 tig0003001:-242 None:intergenic
ATGTCTGCTCCAGCAAATCC+TGG 0.444210 tig0003001:-4054 None:intergenic
GTGGTTTGGAGAAGAAGAAC+AGG 0.451185 tig0003001:+4175 Msa1339020:CDS
GGAAGACCCACCACCCTCCT+TGG 0.451311 tig0003001:-5579 None:intergenic
GAACCAGATATGGAAAGAAA+TGG 0.451853 tig0003001:-3619 None:intergenic
ATGGTGATATTTGTAGTTGT+CGG 0.451906 tig0003001:-243 None:intergenic
GGTGTTGGTGGTGGCTCCAC+TGG 0.453849 tig0003001:+3151 Msa1339020:CDS
CTCCAGCAAATCCTGGAGTA+AGG 0.456693 tig0003001:-4047 None:intergenic
ATTTGTTGGAGACAACAATA+TGG 0.457579 tig0003001:-2826 None:intergenic
AAGTACTTTAAATCAATTGT+TGG 0.458092 tig0003001:+3804 Msa1339020:CDS
ATTTCAGAAGAATATATAAC+AGG 0.458585 tig0003001:-3037 None:intergenic
TTACCAGTATCGCCGCTGTA+TGG 0.460948 tig0003001:-5305 None:intergenic
GTTCTCACTAGGAACATATT+GGG 0.461038 tig0003001:-4802 None:intergenic
ATTGATGAGATTGATGCAAT+TGG 0.464604 tig0003001:+3733 Msa1339020:CDS
TACTGGTAACATCATTGATC+AGG 0.465960 tig0003001:+5319 Msa1339020:CDS
TCTCACCCCATTGTTGGTGG+TGG 0.465963 tig0003001:+1358 Msa1339020:CDS
ATGGAAATGTTTGTCGGTGT+TGG 0.466679 tig0003001:+3649 Msa1339020:CDS
CACTGGAGCACAAAATGACT+TGG 0.469816 tig0003001:+5181 Msa1339020:CDS
ATAGTCCCACCACCAACAAT+GGG 0.471876 tig0003001:-1364 None:intergenic
GAAGGAAGTGCCAAAGGGAG+AGG 0.474904 tig0003001:+879 Msa1339020:CDS
ACCAGATCCCTTTGCAGGAA+GGG 0.475185 tig0003001:-2912 None:intergenic
GATTTCATGGAAATGTTTGT+CGG 0.475383 tig0003001:+3643 Msa1339020:CDS
CTCATTGGAGCAATCTCCAC+TGG 0.475680 tig0003001:+5164 Msa1339020:CDS
TTGCACGGTGAAGCAAGATT+GGG 0.476061 tig0003001:+528 Msa1339020:CDS
TGATGCAATTGGTCGGAAAA+GGG 0.476507 tig0003001:+3744 Msa1339020:CDS
ATTACGATAGATTTAAGCTA+GGG 0.479014 tig0003001:+5513 Msa1339020:CDS
TTGGTGGAAATGGATGGTTT+TGG 0.480220 tig0003001:+3823 Msa1339020:CDS
TTGTCGGTGTTGGACCATCC+AGG 0.481495 tig0003001:+3659 Msa1339020:CDS
TATTTGGGCATATGTCATCT+TGG 0.483350 tig0003001:-5213 None:intergenic
CTCGCGGCACAGCAGCACTT+GGG 0.487871 tig0003001:+4775 Msa1339020:CDS
GCTGGAGTTGTTGTGCTAGC+AGG 0.490258 tig0003001:+3853 Msa1339020:CDS
GATGAAGCCAAGGAGGGTGG+TGG 0.491766 tig0003001:+5572 Msa1339020:CDS
TGCCTAGGTAATAAGTAAGC+TGG 0.491812 tig0003001:+4659 Msa1339020:intron
AGCCTTCATATTATTCTCAA+AGG 0.492433 tig0003001:+4016 Msa1339020:CDS
GCAGCTATCGATAGGATCAT+TGG 0.493752 tig0003001:+4153 Msa1339020:CDS
TTCCTAGTGAGAACCTTCTC+AGG 0.496104 tig0003001:+4811 Msa1339020:CDS
GATCACGAGGACCAAGAGAA+AGG 0.498134 tig0003001:-1397 None:intergenic
ACCCTCCTTGGCTTCATCGA+CGG 0.499935 tig0003001:-5567 None:intergenic
GCTGATATGGACAACTTGTA+CGG 0.500045 tig0003001:+5689 Msa1339020:three_prime_UTR
GACAACGCCTTACTTAGGCC+TGG 0.501131 tig0003001:+3898 Msa1339020:CDS
GGAAAAGAAGGAAGTGCCAA+AGG 0.503043 tig0003001:+873 Msa1339020:CDS
TACTTTAAATCAATTGTTGG+TGG 0.503402 tig0003001:+3807 Msa1339020:CDS
GATATGACTTGTATGACCCT+TGG 0.505273 tig0003001:+4852 Msa1339020:CDS
AGATTCGAACCAAGTCATCT+TGG 0.507271 tig0003001:-5454 None:intergenic
GTAGGTTCTGCACTCTTGAA+GGG 0.508253 tig0003001:-5488 None:intergenic
CAAGGAACCCTTCCTGCAAA+GGG 0.510654 tig0003001:+2905 Msa1339020:CDS
TGATCAGGAAGTGCGAGATT+GGG 0.511795 tig0003001:+5334 Msa1339020:CDS
GAAAACATGCGATGAAGCCT+AGG 0.512524 tig0003001:-699 None:intergenic
AATCAATTGCTGCAAACCCT+AGG 0.513115 tig0003001:+682 Msa1339020:CDS
ACAATATGGTCTACTAATCC+TGG 0.514715 tig0003001:-2812 None:intergenic
TCCAAAAGGTGCTCTTCTGG+TGG 0.519532 tig0003001:+3537 Msa1339020:CDS
CTTGTATGACCCTTGGTGGT+CGG 0.520582 tig0003001:+4859 Msa1339020:CDS
AAACCCATTATTACGAGCTA+TGG 0.521150 tig0003001:-637 None:intergenic
CCAAGGAACCCTTCCTGCAA+AGG 0.522628 tig0003001:+2904 Msa1339020:CDS
AGGCTTGCAGCCCTTACTCC+AGG 0.523091 tig0003001:+4036 Msa1339020:CDS
AATAGTCCCACCACCAACAA+TGG 0.523458 tig0003001:-1365 None:intergenic
AAAACGCCCAGGCCTAAGTA+AGG 0.525242 tig0003001:-3905 None:intergenic
CAAACATAAACTTAACTATG+TGG 0.526794 tig0003001:-5624 None:intergenic
TCGCTGTCTGCTTGATTAAG+GGG 0.530649 tig0003001:-2878 None:intergenic
ACCGTTGCTTACCATGAAGC+AGG 0.531277 tig0003001:+4690 Msa1339020:CDS
CTCCTTGGCTTCATCGACGG+TGG 0.532013 tig0003001:-5564 None:intergenic
ATCACGAGGACCAAGAGAAA+GGG 0.533495 tig0003001:-1396 None:intergenic
AATTACGATAGATTTAAGCT+AGG 0.533611 tig0003001:+5512 Msa1339020:CDS
ATTGGTCGGAAAAGGGGTCG+TGG 0.536073 tig0003001:+3751 Msa1339020:CDS
CACCAGATCCCTTTGCAGGA+AGG 0.536420 tig0003001:-2913 None:intergenic
CTCGGCAGCCCGACCACCAA+GGG 0.536999 tig0003001:-4868 None:intergenic
GGTCGTGGAATATTTAACAT+TGG 0.540391 tig0003001:+3181 Msa1339020:CDS
CCTAAGAAATACGAAGAGCT+TGG 0.541178 tig0003001:+3505 Msa1339020:CDS
CGTATTTCTTAGGATTCTTG+AGG 0.544887 tig0003001:-3495 None:intergenic
TCAAAGTCAAACACAGAGGA+TGG 0.545037 tig0003001:+1293 Msa1339020:CDS
GTGCAAGGTGGATTTGGTGT+TGG 0.545995 tig0003001:+3136 Msa1339020:CDS
TGGTCACGACCTTTAATGTC+AGG 0.547707 tig0003001:-3952 None:intergenic
TGGTCCTCGTGATCAGCAGC+AGG 0.548339 tig0003001:+1406 Msa1339020:CDS
AGCCTTTGAGAATAATATGA+AGG 0.549153 tig0003001:-4018 None:intergenic
GTTCCCAAAATCAACAGGGC+TGG 0.550216 tig0003001:-3091 None:intergenic
CTCACCCCATTGTTGGTGGT+GGG 0.551716 tig0003001:+1359 Msa1339020:CDS
CTTGGTGCCAAAATTCCAAA+AGG 0.552017 tig0003001:+3523 Msa1339020:CDS
TATTAGACAACGCCTTACTT+AGG 0.552358 tig0003001:+3893 Msa1339020:CDS
AAACATAAACTTAACTATGT+GGG 0.552385 tig0003001:-5623 None:intergenic
GCGCAAATCTCATTAACTCC+TGG 0.554538 tig0003001:-3069 None:intergenic
CTATCTCACCCCATTGTTGG+TGG 0.556416 tig0003001:+1355 Msa1339020:CDS
TAAGCTAGGGTTTCAAGATG+AGG 0.556661 tig0003001:+5526 Msa1339020:CDS
CAGGCCATGCTGTTGCAGGT+TGG 0.560076 tig0003001:+4709 Msa1339020:CDS
GCTGCTCCTTTGTCCTGAGA+AGG 0.560952 tig0003001:-4824 None:intergenic
ACAACGCCTTACTTAGGCCT+GGG 0.561103 tig0003001:+3899 Msa1339020:CDS
GAACTCTCTGGTTTATGGGA+AGG 0.561814 tig0003001:+3110 Msa1339020:CDS
AACAAGTTTCTCACCCTGGA+TGG 0.565612 tig0003001:-3673 None:intergenic
AGGTAATAAGTAAGCTGGAA+AGG 0.566130 tig0003001:+4664 Msa1339020:intron
TCCACTGGTAAGAATGGTCG+TGG 0.570992 tig0003001:+3166 Msa1339020:CDS
TCATCAATAAATACTATACT+GGG 0.572453 tig0003001:-3718 None:intergenic
AGTACTTCACCAAGATGACT+TGG 0.572458 tig0003001:+5445 Msa1339020:CDS
GAAACTTGTTTCTGGAAGCA+AGG 0.572866 tig0003001:+3686 Msa1339020:CDS
GAGGAAGCGCAAGAAGCACT+AGG 0.572888 tig0003001:+2992 Msa1339020:CDS
GAAAAGAAGGAAGTGCCAAA+GGG 0.575045 tig0003001:+874 Msa1339020:CDS
GCTCGGCAGCCCGACCACCA+AGG 0.576079 tig0003001:-4869 None:intergenic
TCCACGACCATTCTTACCAG+TGG 0.580385 tig0003001:-3167 None:intergenic
TCCAGCAAATCCTGGAGTAA+GGG 0.580747 tig0003001:-4046 None:intergenic
CCAAAAGGTGCTCTTCTGGT+GGG 0.582841 tig0003001:+3538 Msa1339020:CDS
GTCTTCCCCTCTAGAACCTG+AGG 0.583885 tig0003001:+5595 Msa1339020:CDS
ATCGTGCGGTCAAAACGCCC+AGG 0.591416 tig0003001:-3916 None:intergenic
CAGAAACAAGTTTCTCACCC+TGG 0.591544 tig0003001:-3677 None:intergenic
ACAATAGTTACTTTCAACAA+TGG 0.594322 tig0003001:-4750 None:intergenic
ATCATGCTTTGAAGAAACAA+TGG 0.598166 tig0003001:-371 None:intergenic
GGTGGCTCCACTGGTAAGAA+TGG 0.599960 tig0003001:+3160 Msa1339020:CDS
ATGACTTGTATGACCCTTGG+TGG 0.602845 tig0003001:+4855 Msa1339020:CDS
AACCACCGTCGATGAAGCCA+AGG 0.603186 tig0003001:+5562 Msa1339020:CDS
TGGTTTGGAGAAGAAGAACA+GGG 0.606026 tig0003001:+4176 Msa1339020:CDS
AAAACATGCGATGAAGCCTA+GGG 0.607666 tig0003001:-698 None:intergenic
TTGAAGAAACAATGGTAACT+GGG 0.607909 tig0003001:-363 None:intergenic
GCCTGCTTCATGGTAAGCAA+CGG 0.609319 tig0003001:-4691 None:intergenic
CTTCCTGCAAAGGGATCTGG+TGG 0.609552 tig0003001:+2914 Msa1339020:CDS
GATGCAATTGGTCGGAAAAG+GGG 0.610099 tig0003001:+3745 Msa1339020:CDS
GTCGATGAAGCCAAGGAGGG+TGG 0.610117 tig0003001:+5569 Msa1339020:CDS
GAACAACCTCAGGTTCTAGA+GGG 0.611791 tig0003001:-5601 None:intergenic
AAATGATGAAACAACCTGCT+CGG 0.612044 tig0003001:-4886 None:intergenic
GGAACAACCTCAGGTTCTAG+AGG 0.612494 tig0003001:-5602 None:intergenic
TGTCGGTGTTGGACCATCCA+GGG 0.613071 tig0003001:+3660 Msa1339020:CDS
CACCGTCGATGAAGCCAAGG+AGG 0.615453 tig0003001:+5565 Msa1339020:CDS
GTCCTGAGAAGGTTCTCACT+AGG 0.616189 tig0003001:-4813 None:intergenic
GCTATCGATAGGATCATTGG+TGG 0.616670 tig0003001:+4156 Msa1339020:CDS
ATGAAGCCAAGGAGGGTGGT+GGG 0.619072 tig0003001:+5573 Msa1339020:CDS
CAAGCAGACAGCGAAGTCCA+AGG 0.624939 tig0003001:+2887 Msa1339020:CDS
CAATTGTTGGTGGAAATGGA+TGG 0.625755 tig0003001:+3817 Msa1339020:CDS
AAACAATGGTAACTGGGTCG+AGG 0.625889 tig0003001:-357 None:intergenic
GAGAATAATATGAAGGCTCG+TGG 0.628614 tig0003001:-4011 None:intergenic
ATGAGATTGATGCAATTGGT+CGG 0.631846 tig0003001:+3737 Msa1339020:CDS
CTTACCTGCTGCTGATCACG+AGG 0.632040 tig0003001:-1410 None:intergenic
AAGCTGCTCTGATTGCTGCA+AGG 0.638573 tig0003001:+4094 Msa1339020:CDS
TGATGAATCACAAGTCACAA+TGG 0.642219 tig0003001:+4119 Msa1339020:CDS
GGTCGGAAAAGGGGTCGTGG+AGG 0.642405 tig0003001:+3754 Msa1339020:CDS
TAGCACAACAACTCCAGCAG+TGG 0.652358 tig0003001:-3848 None:intergenic
AGAACCAACCTGCAACAGCA+TGG 0.654487 tig0003001:-4713 None:intergenic
GTCATGTAGAATTTGTTGCA+CGG 0.655486 tig0003001:+513 Msa1339020:intron
ACCGTCGATGAAGCCAAGGA+GGG 0.657299 tig0003001:+5566 Msa1339020:CDS
ATGGGAAGGAAAGTGCAAGG+TGG 0.659337 tig0003001:+3124 Msa1339020:CDS
TGAGAACCTTCTCAGGACAA+AGG 0.663177 tig0003001:+4818 Msa1339020:CDS
AAGTCAAACACAGAGGATGG+AGG 0.663945 tig0003001:+1296 Msa1339020:CDS
CCAAGTGCTGCTGTGCCGCG+AGG 0.668668 tig0003001:-4774 None:intergenic
TTTAGCAAAAGCAACTGCAG+GGG 0.671935 tig0003001:+3585 Msa1339020:CDS
GTACATCAATTGATATCGTG+CGG 0.677345 tig0003001:-3930 None:intergenic
AACAACCTCAGGTTCTAGAG+GGG 0.692952 tig0003001:-5600 None:intergenic
CAGTTGCCAAAATATATGTG+AGG 0.694454 tig0003001:+2849 Msa1339020:CDS
AAAGTAACTATTGTTCCTCG+CGG 0.694758 tig0003001:+4759 Msa1339020:CDS
ACAGCTTATAGAAGAACACA+AGG 0.695122 tig0003001:+5382 Msa1339020:CDS
TTTATGGGAAGGAAAGTGCA+AGG 0.696455 tig0003001:+3121 Msa1339020:CDS
AGATGTTGCTGGCTGTGACG+AGG 0.714294 tig0003001:+3441 Msa1339020:CDS
GAGAGTTCCCAAAATCAACA+GGG 0.722016 tig0003001:-3095 None:intergenic
TAGTCCCACCACCAACAATG+GGG 0.742812 tig0003001:-1363 None:intergenic
TGAGTCAAAGTCAAACACAG+AGG 0.760960 tig0003001:+1289 Msa1339020:CDS
GCGTTTGGGAAACCATACAG+CGG 0.791210 tig0003001:+5293 Msa1339020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTATTAATGATTTTTAAT+TGG + tig0003001:490-509 Msa1339020:intron 10.0%
!!! TTATTTTAATTTTCTTATGT+GGG + tig0003001:1465-1484 Msa1339020:intron 10.0%
!!! TATTGATTACATATTTAAAT+TGG - tig0003001:2940-2959 None:intergenic 10.0%
!! TTTAAATATGTAATCAATAT+TGG + tig0003001:2941-2960 Msa1339020:CDS 10.0%
!! TTTAAAAATAAAAAACAAAC+AGG - tig0003001:4216-4235 None:intergenic 10.0%
!!! TTAAAATATAAAATGTTTTC+TGG + tig0003001:4247-4266 Msa1339020:intron 10.0%
!!! TAAAATATAAAATGTTTTCT+GGG + tig0003001:4248-4267 Msa1339020:intron 10.0%
!! AAGAAAATTAAAATAACAAC+CGG - tig0003001:1461-1480 None:intergenic 15.0%
!!! GTTATTTTAATTTTCTTATG+TGG + tig0003001:1464-1483 Msa1339020:intron 15.0%
!!! TATTTTAATTTTCTTATGTG+GGG + tig0003001:1466-1485 Msa1339020:intron 15.0%
!! ATAAGCTAATTTATTCAAAA+TGG - tig0003001:2334-2353 None:intergenic 15.0%
!!! TGAAAATCATGTTTTTTTAT+GGG - tig0003001:2389-2408 None:intergenic 15.0%
!!! TTGAAAATCATGTTTTTTTA+TGG - tig0003001:2390-2409 None:intergenic 15.0%
!! ATTACAAAAAAATAATTCTG+TGG - tig0003001:4450-4469 None:intergenic 15.0%
!! TGAAATAATTCATTATATCT+TGG + tig0003001:4966-4985 Msa1339020:intron 15.0%
!!! TGTCTTAATTTTGATGAAAT+TGG + tig0003001:773-792 Msa1339020:intron 20.0%
!!! GTCTTAATTTTGATGAAATT+GGG + tig0003001:774-793 Msa1339020:intron 20.0%
!! ATAACTTCAAATATATTGCA+AGG + tig0003001:1434-1453 Msa1339020:intron 20.0%
!!! ATTTTAATTTTCTTATGTGG+GGG + tig0003001:1467-1486 Msa1339020:intron 20.0%
!! TTTGTTGATATCTTAACATA+GGG - tig0003001:2249-2268 None:intergenic 20.0%
!!! TTTTGTTGATATCTTAACAT+AGG - tig0003001:2250-2269 None:intergenic 20.0%
!! TTATTATCATATTGCTAATG+TGG + tig0003001:2731-2750 Msa1339020:intron 20.0%
!! ATTTCAGAAGAATATATAAC+AGG - tig0003001:3040-3059 None:intergenic 20.0%
!!! TGTTATATATTCTTCTGAAA+TGG + tig0003001:3039-3058 Msa1339020:CDS 20.0%
!! TTATTTGAATTCATTTGTTC+AGG + tig0003001:3408-3427 Msa1339020:intron 20.0%
!! TCATCAATAAATACTATACT+GGG - tig0003001:3721-3740 None:intergenic 20.0%
!! AAGTACTTTAAATCAATTGT+TGG + tig0003001:3804-3823 Msa1339020:CDS 20.0%
!!! TCAAATAAATCTGAAATATC+TGG - tig0003001:3975-3994 None:intergenic 20.0%
!! ACAATTATCTGAAGATTATA+TGG + tig0003001:4577-4596 Msa1339020:intron 20.0%
!! TATTATCAGTAGTTGAAAAA+AGG - tig0003001:4615-4634 None:intergenic 20.0%
!! ATGTGAAACAAAATAAGTAA+TGG - tig0003001:4993-5012 None:intergenic 20.0%
!!! TTAAATCTATCGTAATTTGT+AGG - tig0003001:5509-5528 None:intergenic 20.0%
!! AAACATAAACTTAACTATGT+GGG - tig0003001:5626-5645 None:intergenic 20.0%
! AAAAACGAGATACGATAAAA+TGG - tig0003001:265-284 None:intergenic 25.0%
!!! AGCATGATTTTTTCAAGAAT+TGG + tig0003001:386-405 Msa1339020:exon 25.0%
!!! GCATGATTTTTTCAAGAATT+GGG + tig0003001:387-406 Msa1339020:exon 25.0%
! TTTATCGATGATGTTGAAAA+TGG + tig0003001:582-601 Msa1339020:CDS 25.0%
!!! ATGATGTTGAAAATGGATTA+GGG + tig0003001:589-608 Msa1339020:CDS 25.0%
!!! AAAATGGATTAGGGTTTTTA+AGG + tig0003001:598-617 Msa1339020:CDS 25.0%
!!! AAATGGATTAGGGTTTTTAA+GGG + tig0003001:599-618 Msa1339020:CDS 25.0%
!! TAACTTACTCTTTTTCTTTG+GGG - tig0003001:733-752 None:intergenic 25.0%
!! CTAACTTACTCTTTTTCTTT+GGG - tig0003001:734-753 None:intergenic 25.0%
! CAAAGAAAAAGAGTAAGTTA+GGG + tig0003001:733-752 Msa1339020:intron 25.0%
!! TTTTGATGAAATTGGGAAAA+TGG + tig0003001:781-800 Msa1339020:intron 25.0%
! TTTGATGAAATTGGGAAAAT+GGG + tig0003001:782-801 Msa1339020:intron 25.0%
!!! TTATGAAAAGTTTTATCCCA+AGG + tig0003001:852-871 Msa1339020:CDS 25.0%
! AATTACTCTCAATTAGTGTT+GGG + tig0003001:1045-1064 Msa1339020:intron 25.0%
!! TTCTCTCAATCATATGATTT+TGG + tig0003001:1138-1157 Msa1339020:intron 25.0%
!!! TTTTGAGGTATTTATATGTG+TGG + tig0003001:1176-1195 Msa1339020:intron 25.0%
!! TTTGAGGTATTTATATGTGT+GGG + tig0003001:1177-1196 Msa1339020:intron 25.0%
!!! TTTTAATTTTCTTATGTGGG+GGG + tig0003001:1468-1487 Msa1339020:intron 25.0%
! GACTTGTAAACTTATGTTTA+AGG - tig0003001:1586-1605 None:intergenic 25.0%
! TAAACATAAGTTTACAAGTC+AGG + tig0003001:1586-1605 Msa1339020:intron 25.0%
! AAACATAAGTTTACAAGTCA+GGG + tig0003001:1587-1606 Msa1339020:intron 25.0%
! CTGATACTATCTTAGAATTT+GGG - tig0003001:1660-1679 None:intergenic 25.0%
! TCTGATACTATCTTAGAATT+TGG - tig0003001:1661-1680 None:intergenic 25.0%
! TGAACATAAGTTTATAAGTG+AGG + tig0003001:1816-1835 Msa1339020:intron 25.0%
! GAACATAAGTTTATAAGTGA+GGG + tig0003001:1817-1836 Msa1339020:intron 25.0%
!! ATCGATGTTCAATTTTCAAT+CGG - tig0003001:1932-1951 None:intergenic 25.0%
! CTAATAGTATTCTTGTGTAA+TGG - tig0003001:2000-2019 None:intergenic 25.0%
!! ATTACATATTCGAGCTTTAT+AGG - tig0003001:2079-2098 None:intergenic 25.0%
! TAAAGCTCGAATATGTAATA+CGG + tig0003001:2080-2099 Msa1339020:intron 25.0%
!!! AAAAACATGATTTTCAAGTC+TGG + tig0003001:2393-2412 Msa1339020:intron 25.0%
! AAAACAGTTCAAGATAATGT+TGG - tig0003001:2453-2472 None:intergenic 25.0%
! AATATGCAGATACATATCTT+AGG - tig0003001:2533-2552 None:intergenic 25.0%
! AAGATATGTATCTGCATATT+TGG + tig0003001:2533-2552 Msa1339020:intron 25.0%
! AGATATGTATCTGCATATTT+GGG + tig0003001:2534-2553 Msa1339020:intron 25.0%
!!! ATAACAATTTTGATACGTCT+AGG + tig0003001:2585-2604 Msa1339020:intron 25.0%
!!! AAAGCTTATTTTTAAACTCC+TGG - tig0003001:2787-2806 None:intergenic 25.0%
!! GGAGTTTAAAAATAAGCTTT+TGG + tig0003001:2787-2806 Msa1339020:CDS 25.0%
!!! TATATTCTTCTGAAATGGTT+TGG + tig0003001:3044-3063 Msa1339020:CDS 25.0%
! AGACAAAAATACCAAAAACA+AGG + tig0003001:3225-3244 Msa1339020:CDS 25.0%
! AAAAATACCAAAAACAAGGT+TGG + tig0003001:3229-3248 Msa1339020:intron 25.0%
! GTGATTTATTCTTCATGAAT+TGG + tig0003001:3251-3270 Msa1339020:intron 25.0%
!!! GTTTATTTTAAAGATGTTGC+TGG + tig0003001:3430-3449 Msa1339020:CDS 25.0%
! CTCATCAATAAATACTATAC+TGG - tig0003001:3722-3741 None:intergenic 25.0%
! TACTTTAAATCAATTGTTGG+TGG + tig0003001:3807-3826 Msa1339020:CDS 25.0%
!! AAAAACAAACAGGCTTTTAA+AGG - tig0003001:4206-4225 None:intergenic 25.0%
!! TATAAAATGTTTTCTGGGTT+TGG + tig0003001:4253-4272 Msa1339020:intron 25.0%
!! TAATTTAAGACATCATGATG+AGG + tig0003001:4541-4560 Msa1339020:intron 25.0%
! TATCTGAAGATTATATGGAT+TGG + tig0003001:4582-4601 Msa1339020:intron 25.0%
!! ACAATAGTTACTTTCAACAA+TGG - tig0003001:4753-4772 None:intergenic 25.0%
! AGCAATGAATAAAAGAAAAG+AGG - tig0003001:4929-4948 None:intergenic 25.0%
!!! TGTATATCAGTGTTTTTTTG+TGG - tig0003001:5062-5081 None:intergenic 25.0%
! ATCTCATGACTTACAATATT+GGG - tig0003001:5108-5127 None:intergenic 25.0%
! AATTACGATAGATTTAAGCT+AGG + tig0003001:5512-5531 Msa1339020:CDS 25.0%
! ATTACGATAGATTTAAGCTA+GGG + tig0003001:5513-5532 Msa1339020:CDS 25.0%
! CAAACATAAACTTAACTATG+TGG - tig0003001:5627-5646 None:intergenic 25.0%
ATGGTGATATTTGTAGTTGT+CGG - tig0003001:246-265 None:intergenic 30.0%
TTGAAGAAACAATGGTAACT+GGG - tig0003001:366-385 None:intergenic 30.0%
TTTGAAGAAACAATGGTAAC+TGG - tig0003001:367-386 None:intergenic 30.0%
!! ATCATGCTTTGAAGAAACAA+TGG - tig0003001:374-393 None:intergenic 30.0%
! GATGATGTTGAAAATGGATT+AGG + tig0003001:588-607 Msa1339020:CDS 30.0%
!!! AATGGATTAGGGTTTTTAAG+GGG + tig0003001:600-619 Msa1339020:CDS 30.0%
! CCTAACTTACTCTTTTTCTT+TGG - tig0003001:735-754 None:intergenic 30.0%
CCAAAGAAAAAGAGTAAGTT+AGG + tig0003001:732-751 Msa1339020:intron 30.0%
GAGAAAAAATCTGAGTCTAA+AGG + tig0003001:901-920 Msa1339020:CDS 30.0%
! TCTTGTGTTATTGTTAGTTG+TGG + tig0003001:959-978 Msa1339020:intron 30.0%
GAATTACTCTCAATTAGTGT+TGG + tig0003001:1044-1063 Msa1339020:intron 30.0%
TTGAGAGAAAACATGTTGTT+GGG - tig0003001:1127-1146 None:intergenic 30.0%
ATTGAGAGAAAACATGTTGT+TGG - tig0003001:1128-1147 None:intergenic 30.0%
!!! TCTGTACTGGTTTAATTTTG+AGG + tig0003001:1161-1180 Msa1339020:intron 30.0%
! TTGAGGTATTTATATGTGTG+GGG + tig0003001:1178-1197 Msa1339020:intron 30.0%
TTCAAATATATTGCAAGGTC+CGG + tig0003001:1439-1458 Msa1339020:intron 30.0%
GATCTATAAATATCCGTGTT+CGG + tig0003001:1520-1539 Msa1339020:intron 30.0%
! ACTATCTTAGAATTTGGGTT+GGG - tig0003001:1655-1674 None:intergenic 30.0%
TACTATCTTAGAATTTGGGT+TGG - tig0003001:1656-1675 None:intergenic 30.0%
AACTTCATCTCATTCAATGT+GGG - tig0003001:1796-1815 None:intergenic 30.0%
AAACTTCATCTCATTCAATG+TGG - tig0003001:1797-1816 None:intergenic 30.0%
TTAACTCATCCTTACAAAAC+TGG - tig0003001:1861-1880 None:intergenic 30.0%
!! AACATCTAGCCTTAGAATAT+GGG - tig0003001:1890-1909 None:intergenic 30.0%
!! TAACATCTAGCCTTAGAATA+TGG - tig0003001:1891-1910 None:intergenic 30.0%
TCAAAATGGTTGTGAATTGT+TGG - tig0003001:2320-2339 None:intergenic 30.0%
!!! TCATGTTTTTTTATGGGTGA+TGG - tig0003001:2383-2402 None:intergenic 30.0%
TAATGTTGGACTACTTGAAT+TGG - tig0003001:2439-2458 None:intergenic 30.0%
TTAAAATGTGAGACAGTTGT+AGG - tig0003001:2496-2515 None:intergenic 30.0%
CATATCTTAGGAAAGATGAA+GGG - tig0003001:2521-2540 None:intergenic 30.0%
ACATATCTTAGGAAAGATGA+AGG - tig0003001:2522-2541 None:intergenic 30.0%
!!! AAAAATAAGCTTTTGGAACC+AGG + tig0003001:2794-2813 Msa1339020:CDS 30.0%
! ATTTGTTGGAGACAACAATA+TGG - tig0003001:2829-2848 None:intergenic 30.0%
!!! TATTTTGGCAACTGATTTGT+TGG - tig0003001:2843-2862 None:intergenic 30.0%
! AGAGTTCCTCACATATATTT+TGG - tig0003001:2858-2877 None:intergenic 30.0%
!!! TAAATCACCAACCTTGTTTT+TGG - tig0003001:3239-3258 None:intergenic 30.0%
GATTTCATGGAAATGTTTGT+CGG + tig0003001:3643-3662 Msa1339020:CDS 30.0%
ATTGATGAGATTGATGCAAT+TGG + tig0003001:3733-3752 Msa1339020:CDS 30.0%
! AAATCAATTGTTGGTGGAAA+TGG + tig0003001:3813-3832 Msa1339020:CDS 30.0%
ATTGATGTACCTGACATTAA+AGG + tig0003001:3943-3962 Msa1339020:CDS 30.0%
AGCCTTCATATTATTCTCAA+AGG + tig0003001:4016-4035 Msa1339020:CDS 30.0%
! AGCCTTTGAGAATAATATGA+AGG - tig0003001:4021-4040 None:intergenic 30.0%
! GTTAAGCTGTTTAAAACAGT+CGG + tig0003001:4279-4298 Msa1339020:intron 30.0%
AAGAGGTGAGTAAACAAAAT+TGG - tig0003001:4912-4931 None:intergenic 30.0%
CATCTCATGACTTACAATAT+TGG - tig0003001:5109-5128 None:intergenic 30.0%
TATGGTTTCAGTGAAAAAGT+GGG + tig0003001:5242-5261 Msa1339020:CDS 30.0%
!! GTTTAGTCATTTTGCTGATA+TGG + tig0003001:5676-5695 Msa1339020:three_prime_UTR 30.0%
! GAAATAGACTTTGATTAGCT+TGG - tig0003001:5771-5790 None:intergenic 30.0%
TGGTGATATTTGTAGTTGTC+GGG - tig0003001:245-264 None:intergenic 35.0%
!! GTCATGTAGAATTTGTTGCA+CGG + tig0003001:513-532 Msa1339020:intron 35.0%
AAACCCATTATTACGAGCTA+TGG - tig0003001:640-659 None:intergenic 35.0%
! GTTTTATCCCAAGGAAAAGA+AGG + tig0003001:861-880 Msa1339020:CDS 35.0%
!! CATATGATTTTGGTCTGTAC+TGG + tig0003001:1148-1167 Msa1339020:intron 35.0%
! TGAGGTATTTATATGTGTGG+GGG + tig0003001:1179-1198 Msa1339020:intron 35.0%
CAGTTTGTCTTGCGATAAAT+GGG + tig0003001:1224-1243 Msa1339020:intron 35.0%
AGTTTGTCTTGCGATAAATG+GGG + tig0003001:1225-1244 Msa1339020:intron 35.0%
! GAAGTGTTAAAAATTGCTGC+TGG - tig0003001:1253-1272 None:intergenic 35.0%
TTTCTTTCATCCCTTTCTCT+TGG + tig0003001:1386-1405 Msa1339020:CDS 35.0%
TTAACACACTCACACCTTTA+CGG - tig0003001:1768-1787 None:intergenic 35.0%
! TAAAGGTGTGAGTGTGTTAA+GGG + tig0003001:1768-1787 Msa1339020:intron 35.0%
ACTTCATCTCATTCAATGTG+GGG - tig0003001:1795-1814 None:intergenic 35.0%
TAAACCCAACCCATATTCTA+AGG + tig0003001:1878-1897 Msa1339020:intron 35.0%
!! TTTCCATGTTTTTGCTTGCT+TGG + tig0003001:2040-2059 Msa1339020:intron 35.0%
ATACCAAGCAAGCAAAAACA+TGG - tig0003001:2046-2065 None:intergenic 35.0%
ACAATATGGTCTACTAATCC+TGG - tig0003001:2815-2834 None:intergenic 35.0%
CAGTTGCCAAAATATATGTG+AGG + tig0003001:2849-2868 Msa1339020:CDS 35.0%
GGTCGTGGAATATTTAACAT+TGG + tig0003001:3181-3200 Msa1339020:CDS 35.0%
CCTAAAGAAAAAGTGGACAT+GGG - tig0003001:3334-3353 None:intergenic 35.0%
!!! CCATGTCCACTTTTTCTTTA+GGG + tig0003001:3332-3351 Msa1339020:intron 35.0%
ACAACTCCCTAAAGAAAAAG+TGG - tig0003001:3341-3360 None:intergenic 35.0%
!! ACTTTTTCTTTAGGGAGTTG+TGG + tig0003001:3340-3359 Msa1339020:intron 35.0%
CGTATTTCTTAGGATTCTTG+AGG - tig0003001:3498-3517 None:intergenic 35.0%
!!! AAGAGCACCTTTTGGAATTT+TGG - tig0003001:3533-3552 None:intergenic 35.0%
!!! TGCAGTTGCTTTTGCTAAAA+GGG - tig0003001:3584-3603 None:intergenic 35.0%
! TTTTAGCAAAAGCAACTGCA+GGG + tig0003001:3584-3603 Msa1339020:CDS 35.0%
GAACCAGATATGGAAAGAAA+TGG - tig0003001:3622-3641 None:intergenic 35.0%
CATGAAATCAGAACCAGATA+TGG - tig0003001:3632-3651 None:intergenic 35.0%
!! CATATCTGGTTCTGATTTCA+TGG + tig0003001:3630-3649 Msa1339020:CDS 35.0%
ATGAGATTGATGCAATTGGT+CGG + tig0003001:3737-3756 Msa1339020:CDS 35.0%
TATTAGACAACGCCTTACTT+AGG + tig0003001:3893-3912 Msa1339020:CDS 35.0%
GTACATCAATTGATATCGTG+CGG - tig0003001:3933-3952 None:intergenic 35.0%
TGATGAATCACAAGTCACAA+TGG + tig0003001:4119-4138 Msa1339020:CDS 35.0%
! AGTCACAATGGATCATTTTG+AGG + tig0003001:4131-4150 Msa1339020:CDS 35.0%
AATACTCATGTTTCTTGCCT+AGG + tig0003001:4644-4663 Msa1339020:intron 35.0%
TTCCAGCTTACTTATTACCT+AGG - tig0003001:4664-4683 None:intergenic 35.0%
AGGTAATAAGTAAGCTGGAA+AGG + tig0003001:4664-4683 Msa1339020:intron 35.0%
AAAGTAACTATTGTTCCTCG+CGG + tig0003001:4759-4778 Msa1339020:CDS 35.0%
GTTCTCACTAGGAACATATT+GGG - tig0003001:4805-4824 None:intergenic 35.0%
AAATGATGAAACAACCTGCT+CGG - tig0003001:4889-4908 None:intergenic 35.0%
!! TACAATATTGGGAAGCATCA+AGG - tig0003001:5097-5116 None:intergenic 35.0%
AAGTCATGAGATGAGTATGA+TGG + tig0003001:5116-5135 Msa1339020:intron 35.0%
! ATGGTTTCTGTCCCTTTTTA+CGG + tig0003001:5135-5154 Msa1339020:intron 35.0%
TATTTGGGCATATGTCATCT+TGG - tig0003001:5216-5235 None:intergenic 35.0%
TACTGGTAACATCATTGATC+AGG + tig0003001:5319-5338 Msa1339020:CDS 35.0%
GTGTTCTTCTATAAGCTGTA+TGG - tig0003001:5381-5400 None:intergenic 35.0%
ACAGCTTATAGAAGAACACA+AGG + tig0003001:5382-5401 Msa1339020:CDS 35.0%
TCTGCCATAGCTCGTAATAA+TGG + tig0003001:633-652 Msa1339020:CDS 40.0%
CTGCCATAGCTCGTAATAAT+GGG + tig0003001:634-653 Msa1339020:CDS 40.0%
AATCAATTGCTGCAAACCCT+AGG + tig0003001:682-701 Msa1339020:CDS 40.0%
AAAACATGCGATGAAGCCTA+GGG - tig0003001:701-720 None:intergenic 40.0%
!! GAAAAGAAGGAAGTGCCAAA+GGG + tig0003001:874-893 Msa1339020:CDS 40.0%
!!! GATTTTTTCTCCTCTCCCTT+TGG - tig0003001:892-911 None:intergenic 40.0%
CCATTTATCGCAAGACAAAC+TGG - tig0003001:1226-1245 None:intergenic 40.0%
CCAGTTTGTCTTGCGATAAA+TGG + tig0003001:1223-1242 Msa1339020:intron 40.0%
TGAGTCAAAGTCAAACACAG+AGG + tig0003001:1289-1308 Msa1339020:CDS 40.0%
TCAAAGTCAAACACAGAGGA+TGG + tig0003001:1293-1312 Msa1339020:CDS 40.0%
AAACTATCTCACCCCATTGT+TGG + tig0003001:1352-1371 Msa1339020:CDS 40.0%
! TAATTTTCTTATGTGGGGGG+AGG + tig0003001:1471-1490 Msa1339020:intron 40.0%
! AATTTTCTTATGTGGGGGGA+GGG + tig0003001:1472-1491 Msa1339020:intron 40.0%
AACTCAAACAATGCCGAACA+CGG - tig0003001:1536-1555 None:intergenic 40.0%
TTGAGTTAAGAGTCCTACAC+TGG + tig0003001:1549-1568 Msa1339020:intron 40.0%
! GTCCTACACTGGATTAGATA+AGG + tig0003001:1560-1579 Msa1339020:intron 40.0%
CCTTACAAAACTGTCTAGTG+AGG - tig0003001:1622-1641 None:intergenic 40.0%
!! CCTCACTAGACAGTTTTGTA+AGG + tig0003001:1619-1638 Msa1339020:intron 40.0%
! GTAAAGGTGTGAGTGTGTTA+AGG + tig0003001:1767-1786 Msa1339020:intron 40.0%
! AAAGGTGTGAGTGTGTTAAG+GGG + tig0003001:1769-1788 Msa1339020:intron 40.0%
CCTTACAAAACTGGTCAGTA+AGG - tig0003001:1852-1871 None:intergenic 40.0%
!! CCTTACTGACCAGTTTTGTA+AGG + tig0003001:1849-1868 Msa1339020:intron 40.0%
!! CTAGCCTTAGAATATGGGTT+GGG - tig0003001:1885-1904 None:intergenic 40.0%
!! TCTAGCCTTAGAATATGGGT+TGG - tig0003001:1886-1905 None:intergenic 40.0%
AATGGTTGTGAATTGTTGGC+TGG - tig0003001:2316-2335 None:intergenic 40.0%
! TTATGGGTGATGGTAATGTG+AGG - tig0003001:2373-2392 None:intergenic 40.0%
CAATACTTCGAGGTTACACA+TGG - tig0003001:2619-2638 None:intergenic 40.0%
CATGTGTAACCTCGAAGTAT+TGG + tig0003001:2617-2636 Msa1339020:intron 40.0%
TATCGGATACCAATACTTCG+AGG - tig0003001:2629-2648 None:intergenic 40.0%
CAATTCAAAGGCTCGCATAT+CGG - tig0003001:2646-2665 None:intergenic 40.0%
AGACGTGTGGTTCAATTCAA+AGG - tig0003001:2658-2677 None:intergenic 40.0%
GATGACTCTACATCTTTGTC+TGG + tig0003001:2689-2708 Msa1339020:intron 40.0%
!! TTCTCTGCAGATTAGTTTCC+AGG + tig0003001:2766-2785 Msa1339020:intron 40.0%
TTCGCTGTCTGCTTGATTAA+GGG - tig0003001:2882-2901 None:intergenic 40.0%
!!! TGGAAGTGTTGAGTCTTTTG+AGG + tig0003001:2961-2980 Msa1339020:CDS 40.0%
!! GTCTTTTGAGGAGAAGTTAG+AGG + tig0003001:2973-2992 Msa1339020:CDS 40.0%
!! TTCTGAAATGGTTTGGTACC+AGG + tig0003001:3051-3070 Msa1339020:CDS 40.0%
GAGAGTTCCCAAAATCAACA+GGG - tig0003001:3098-3117 None:intergenic 40.0%
AGAGAGTTCCCAAAATCAAC+AGG - tig0003001:3099-3118 None:intergenic 40.0%
!!! TGTTGATTTTGGGAACTCTC+TGG + tig0003001:3098-3117 Msa1339020:CDS 40.0%
! TTTGGGAACTCTCTGGTTTA+TGG + tig0003001:3105-3124 Msa1339020:CDS 40.0%
! TTGGGAACTCTCTGGTTTAT+GGG + tig0003001:3106-3125 Msa1339020:CDS 40.0%
! TTTATGGGAAGGAAAGTGCA+AGG + tig0003001:3121-3140 Msa1339020:CDS 40.0%
GGAAAGGCAATGATCAACTA+GGG - tig0003001:3313-3332 None:intergenic 40.0%
AGAAAAAGTGGACATGGGAA+AGG - tig0003001:3329-3348 None:intergenic 40.0%
!!! CCCATGTCCACTTTTTCTTT+AGG + tig0003001:3331-3350 Msa1339020:intron 40.0%
CCCTAAAGAAAAAGTGGACA+TGG - tig0003001:3335-3354 None:intergenic 40.0%
CGAGGCAAAGCAAGAAATTA+TGG + tig0003001:3459-3478 Msa1339020:CDS 40.0%
CCAAGCTCTTCGTATTTCTT+AGG - tig0003001:3508-3527 None:intergenic 40.0%
CCTAAGAAATACGAAGAGCT+TGG + tig0003001:3505-3524 Msa1339020:CDS 40.0%
!! CTTGGTGCCAAAATTCCAAA+AGG + tig0003001:3523-3542 Msa1339020:CDS 40.0%
!! AATTCCAAAAGGTGCTCTTC+TGG + tig0003001:3534-3553 Msa1339020:CDS 40.0%
!!! CTGCAGTTGCTTTTGCTAAA+AGG - tig0003001:3585-3604 None:intergenic 40.0%
! CTTTTAGCAAAAGCAACTGC+AGG + tig0003001:3583-3602 Msa1339020:CDS 40.0%
TTTAGCAAAAGCAACTGCAG+GGG + tig0003001:3585-3604 Msa1339020:CDS 40.0%
!! GTGCCATTTCTTTCCATATC+TGG + tig0003001:3616-3635 Msa1339020:CDS 40.0%
ATGGAAATGTTTGTCGGTGT+TGG + tig0003001:3649-3668 Msa1339020:CDS 40.0%
!! GAAACTTGTTTCTGGAAGCA+AGG + tig0003001:3686-3705 Msa1339020:CDS 40.0%
TTGATGCAATTGGTCGGAAA+AGG + tig0003001:3743-3762 Msa1339020:CDS 40.0%
TGATGCAATTGGTCGGAAAA+GGG + tig0003001:3744-3763 Msa1339020:CDS 40.0%
! CAATTGTTGGTGGAAATGGA+TGG + tig0003001:3817-3836 Msa1339020:CDS 40.0%
! TTGGTGGAAATGGATGGTTT+TGG + tig0003001:3823-3842 Msa1339020:CDS 40.0%
GAGAATAATATGAAGGCTCG+TGG - tig0003001:4014-4033 None:intergenic 40.0%
!!! ATTTTGAGGCAGCTATCGAT+AGG + tig0003001:4145-4164 Msa1339020:CDS 40.0%
! TGGTTTGGAGAAGAAGAACA+GGG + tig0003001:4176-4195 Msa1339020:CDS 40.0%
TGCCTAGGTAATAAGTAAGC+TGG + tig0003001:4659-4678 Msa1339020:intron 40.0%
GGTTCTCACTAGGAACATAT+TGG - tig0003001:4806-4825 None:intergenic 40.0%
! GATATGACTTGTATGACCCT+TGG + tig0003001:4852-4871 Msa1339020:CDS 40.0%
ATGAGAACCTGCCGTAAAAA+GGG - tig0003001:5149-5168 None:intergenic 40.0%
AATGAGAACCTGCCGTAAAA+AGG - tig0003001:5150-5169 None:intergenic 40.0%
! TTTTTACGGCAGGTTCTCAT+TGG + tig0003001:5149-5168 Msa1339020:intron 40.0%
AGTACTTCACCAAGATGACT+TGG + tig0003001:5445-5464 Msa1339020:CDS 40.0%
AGATTCGAACCAAGTCATCT+TGG - tig0003001:5457-5476 None:intergenic 40.0%
!! AGATGACTTGGTTCGAATCT+TGG + tig0003001:5457-5476 Msa1339020:CDS 40.0%
!! GATGACTTGGTTCGAATCTT+GGG + tig0003001:5458-5477 Msa1339020:CDS 40.0%
TAAGCTAGGGTTTCAAGATG+AGG + tig0003001:5526-5545 Msa1339020:CDS 40.0%
GCTGATATGGACAACTTGTA+CGG + tig0003001:5689-5708 Msa1339020:three_prime_UTR 40.0%
AAACAATGGTAACTGGGTCG+AGG - tig0003001:360-379 None:intergenic 45.0%
TTGCACGGTGAAGCAAGATT+GGG + tig0003001:528-547 Msa1339020:CDS 45.0%
GCAAGATTGGGAACGCTTTA+TGG + tig0003001:540-559 Msa1339020:CDS 45.0%
GAAAACATGCGATGAAGCCT+AGG - tig0003001:702-721 None:intergenic 45.0%
! GGCACTTCCTTCTTTTCCTT+GGG - tig0003001:871-890 None:intergenic 45.0%
! TGGCACTTCCTTCTTTTCCT+TGG - tig0003001:872-891 None:intergenic 45.0%
!! GGAAAAGAAGGAAGTGCCAA+AGG + tig0003001:873-892 Msa1339020:CDS 45.0%
AAGTCAAACACAGAGGATGG+AGG + tig0003001:1296-1315 Msa1339020:CDS 45.0%
ATAGTCCCACCACCAACAAT+GGG - tig0003001:1367-1386 None:intergenic 45.0%
AATAGTCCCACCACCAACAA+TGG - tig0003001:1368-1387 None:intergenic 45.0%
ATCACGAGGACCAAGAGAAA+GGG - tig0003001:1399-1418 None:intergenic 45.0%
! ATTTTCTTATGTGGGGGGAG+GGG + tig0003001:1473-1492 Msa1339020:intron 45.0%
! GGCCTTATCTAATCCAGTGT+AGG - tig0003001:1565-1584 None:intergenic 45.0%
AGACAGTTGTAGGACATCAG+TGG - tig0003001:2486-2505 None:intergenic 45.0%
TCTCATTGCTAAGAGACGTG+TGG - tig0003001:2671-2690 None:intergenic 45.0%
TCGCTGTCTGCTTGATTAAG+GGG - tig0003001:2881-2900 None:intergenic 45.0%
CTTCGCTGTCTGCTTGATTA+AGG - tig0003001:2883-2902 None:intergenic 45.0%
GCGCAAATCTCATTAACTCC+TGG - tig0003001:3072-3091 None:intergenic 45.0%
! GAACTCTCTGGTTTATGGGA+AGG + tig0003001:3110-3129 Msa1339020:CDS 45.0%
! AGGAAAGTGCAAGGTGGATT+TGG + tig0003001:3130-3149 Msa1339020:CDS 45.0%
GGGAAAGGCAATGATCAACT+AGG - tig0003001:3314-3333 None:intergenic 45.0%
! AAAGGGTTTTTCCTGTGCCT+GGG - tig0003001:3567-3586 None:intergenic 45.0%
! AAAAGGGTTTTTCCTGTGCC+TGG - tig0003001:3568-3587 None:intergenic 45.0%
AACAAGTTTCTCACCCTGGA+TGG - tig0003001:3676-3695 None:intergenic 45.0%
CAGAAACAAGTTTCTCACCC+TGG - tig0003001:3680-3699 None:intergenic 45.0%
! CAGGGTGAGAAACTTGTTTC+TGG + tig0003001:3678-3697 Msa1339020:CDS 45.0%
GATGCAATTGGTCGGAAAAG+GGG + tig0003001:3745-3764 Msa1339020:CDS 45.0%
TGGTCACGACCTTTAATGTC+AGG - tig0003001:3955-3974 None:intergenic 45.0%
TCCAGCAAATCCTGGAGTAA+GGG - tig0003001:4049-4068 None:intergenic 45.0%
GCAGCTATCGATAGGATCAT+TGG + tig0003001:4153-4172 Msa1339020:CDS 45.0%
GCTATCGATAGGATCATTGG+TGG + tig0003001:4156-4175 Msa1339020:CDS 45.0%
! CGATAGGATCATTGGTGGTT+TGG + tig0003001:4161-4180 Msa1339020:CDS 45.0%
! GTGGTTTGGAGAAGAAGAAC+AGG + tig0003001:4175-4194 Msa1339020:CDS 45.0%
TTGGAGAAGAAGAACAGGGT+AGG + tig0003001:4180-4199 Msa1339020:intron 45.0%
TTCCTAGTGAGAACCTTCTC+AGG + tig0003001:4811-4830 Msa1339020:CDS 45.0%
TGAGAACCTTCTCAGGACAA+AGG + tig0003001:4818-4837 Msa1339020:CDS 45.0%
! ATGACTTGTATGACCCTTGG+TGG + tig0003001:4855-4874 Msa1339020:CDS 45.0%
! TTTCTGTCCCTTTTTACGGC+AGG + tig0003001:5139-5158 Msa1339020:intron 45.0%
!! CAAGTCATTTTGTGCTCCAG+TGG - tig0003001:5183-5202 None:intergenic 45.0%
CACTGGAGCACAAAATGACT+TGG + tig0003001:5181-5200 Msa1339020:CDS 45.0%
!! CATTTTGAGGGAAAGAGAGG+AGG - tig0003001:5268-5287 None:intergenic 45.0%
!! CGTCATTTTGAGGGAAAGAG+AGG - tig0003001:5271-5290 None:intergenic 45.0%
!! CAAACGCGTCGTCATTTTGA+GGG - tig0003001:5280-5299 None:intergenic 45.0%
CTCAAAATGACGACGCGTTT+GGG + tig0003001:5279-5298 Msa1339020:CDS 45.0%
! TTGATCAGGAAGTGCGAGAT+TGG + tig0003001:5333-5352 Msa1339020:CDS 45.0%
! TGATCAGGAAGTGCGAGATT+GGG + tig0003001:5334-5353 Msa1339020:CDS 45.0%
GTAGGTTCTGCACTCTTGAA+GGG - tig0003001:5491-5510 None:intergenic 45.0%
TGTAGGTTCTGCACTCTTGA+AGG - tig0003001:5492-5511 None:intergenic 45.0%
!! AACAACCTCAGGTTCTAGAG+GGG - tig0003001:5603-5622 None:intergenic 45.0%
!! GAACAACCTCAGGTTCTAGA+GGG - tig0003001:5604-5623 None:intergenic 45.0%
AACTATGTGGGAACAACCTC+AGG - tig0003001:5614-5633 None:intergenic 45.0%
!!! TTTATTAATGATTTTTAATT+GGG + tig0003001:491-510 Msa1339020:intron 5.0%
!!! AAACATTTTATATTTTAAAA+AGG - tig0003001:4245-4264 None:intergenic 5.0%
GTTGCACGGTGAAGCAAGAT+TGG + tig0003001:527-546 Msa1339020:CDS 50.0%
CTATCTCACCCCATTGTTGG+TGG + tig0003001:1355-1374 Msa1339020:CDS 50.0%
TAGTCCCACCACCAACAATG+GGG - tig0003001:1366-1385 None:intergenic 50.0%
GATCACGAGGACCAAGAGAA+AGG - tig0003001:1400-1419 None:intergenic 50.0%
CAGAGTCTATCCAAGATCCG+CGG + tig0003001:1677-1696 Msa1339020:intron 50.0%
AGAGTCTATCCAAGATCCGC+GGG + tig0003001:1678-1697 Msa1339020:intron 50.0%
! TGCACTCAGGTCACCGTTTT+GGG + tig0003001:1705-1724 Msa1339020:intron 50.0%
CGCTCCAGATGTTTAGTCGT+AGG + tig0003001:1740-1759 Msa1339020:intron 50.0%
! TTTAGTCGTAGGCGCCGTAA+AGG + tig0003001:1751-1770 Msa1339020:intron 50.0%
! TTGGCTGGCTATTGCAGAGA+CGG - tig0003001:2301-2320 None:intergenic 50.0%
CAAGGAACCCTTCCTGCAAA+GGG + tig0003001:2905-2924 Msa1339020:CDS 50.0%
ACCAGATCCCTTTGCAGGAA+GGG - tig0003001:2915-2934 None:intergenic 50.0%
GTTCCCAAAATCAACAGGGC+TGG - tig0003001:3094-3113 None:intergenic 50.0%
! ATGGGAAGGAAAGTGCAAGG+TGG + tig0003001:3124-3143 Msa1339020:CDS 50.0%
!! GTGCAAGGTGGATTTGGTGT+TGG + tig0003001:3136-3155 Msa1339020:CDS 50.0%
!! CAAGGTGGATTTGGTGTTGG+TGG + tig0003001:3139-3158 Msa1339020:CDS 50.0%
TCCACTGGTAAGAATGGTCG+TGG + tig0003001:3166-3185 Msa1339020:CDS 50.0%
TCCACGACCATTCTTACCAG+TGG - tig0003001:3170-3189 None:intergenic 50.0%
!! TCCAAAAGGTGCTCTTCTGG+TGG + tig0003001:3537-3556 Msa1339020:CDS 50.0%
!! CCAAAAGGTGCTCTTCTGGT+GGG + tig0003001:3538-3557 Msa1339020:CDS 50.0%
! AAGGGTTTTTCCTGTGCCTG+GGG - tig0003001:3566-3585 None:intergenic 50.0%
!!! GATGGTTTTGGAACCACTGC+TGG + tig0003001:3835-3854 Msa1339020:CDS 50.0%
TAGCACAACAACTCCAGCAG+TGG - tig0003001:3851-3870 None:intergenic 50.0%
ACAACGCCTTACTTAGGCCT+GGG + tig0003001:3899-3918 Msa1339020:CDS 50.0%
AAAACGCCCAGGCCTAAGTA+AGG - tig0003001:3908-3927 None:intergenic 50.0%
CTCCAGCAAATCCTGGAGTA+AGG - tig0003001:4050-4069 None:intergenic 50.0%
ATGTCTGCTCCAGCAAATCC+TGG - tig0003001:4057-4076 None:intergenic 50.0%
AAGCTGCTCTGATTGCTGCA+AGG + tig0003001:4094-4113 Msa1339020:CDS 50.0%
ACCGTTGCTTACCATGAAGC+AGG + tig0003001:4690-4709 Msa1339020:CDS 50.0%
GCCTGCTTCATGGTAAGCAA+CGG - tig0003001:4694-4713 None:intergenic 50.0%
AGAACCAACCTGCAACAGCA+TGG - tig0003001:4716-4735 None:intergenic 50.0%
!! TGCTGTTGCAGGTTGGTTCT+TGG + tig0003001:4716-4735 Msa1339020:CDS 50.0%
GTCCTGAGAAGGTTCTCACT+AGG - tig0003001:4816-4835 None:intergenic 50.0%
! CAGGACAAAGGAGCAGCTTT+TGG + tig0003001:4830-4849 Msa1339020:CDS 50.0%
! CTTGTATGACCCTTGGTGGT+CGG + tig0003001:4859-4878 Msa1339020:CDS 50.0%
! TTGTATGACCCTTGGTGGTC+GGG + tig0003001:4860-4879 Msa1339020:CDS 50.0%
!! ATTGGGAAGCATCAAGGAGC+AGG - tig0003001:5091-5110 None:intergenic 50.0%
CTCATTGGAGCAATCTCCAC+TGG + tig0003001:5164-5183 Msa1339020:CDS 50.0%
!! CCAAACGCGTCGTCATTTTG+AGG - tig0003001:5281-5300 None:intergenic 50.0%
CCTCAAAATGACGACGCGTT+TGG + tig0003001:5278-5297 Msa1339020:CDS 50.0%
GCGTTTGGGAAACCATACAG+CGG + tig0003001:5293-5312 Msa1339020:CDS 50.0%
AAACCATACAGCGGCGATAC+TGG + tig0003001:5302-5321 Msa1339020:CDS 50.0%
TTACCAGTATCGCCGCTGTA+TGG - tig0003001:5308-5327 None:intergenic 50.0%
! GGAACAACCTCAGGTTCTAG+AGG - tig0003001:5605-5624 None:intergenic 50.0%
!! GAAGGAAGTGCCAAAGGGAG+AGG + tig0003001:879-898 Msa1339020:CDS 55.0%
! TCTCACCCCATTGTTGGTGG+TGG + tig0003001:1358-1377 Msa1339020:CDS 55.0%
!! CTCACCCCATTGTTGGTGGT+GGG + tig0003001:1359-1378 Msa1339020:CDS 55.0%
CTTACCTGCTGCTGATCACG+AGG - tig0003001:1413-1432 None:intergenic 55.0%
CAAAACGGTGACCTGAGTGC+AGG - tig0003001:1706-1725 None:intergenic 55.0%
! CTGCACTCAGGTCACCGTTT+TGG + tig0003001:1704-1723 Msa1339020:intron 55.0%
GGCGCCTACGACTAAACATC+TGG - tig0003001:1747-1766 None:intergenic 55.0%
! TGGCTGGCTATTGCAGAGAC+GGG - tig0003001:2300-2319 None:intergenic 55.0%
CAAGCAGACAGCGAAGTCCA+AGG + tig0003001:2887-2906 Msa1339020:CDS 55.0%
CCTTTGCAGGAAGGGTTCCT+TGG - tig0003001:2907-2926 None:intergenic 55.0%
CCAAGGAACCCTTCCTGCAA+AGG + tig0003001:2904-2923 Msa1339020:CDS 55.0%
ACCCTTCCTGCAAAGGGATC+TGG + tig0003001:2911-2930 Msa1339020:CDS 55.0%
CACCAGATCCCTTTGCAGGA+AGG - tig0003001:2916-2935 None:intergenic 55.0%
CTTCCTGCAAAGGGATCTGG+TGG + tig0003001:2914-2933 Msa1339020:CDS 55.0%
!! GAGGAAGCGCAAGAAGCACT+AGG + tig0003001:2992-3011 Msa1339020:CDS 55.0%
!!! TGCGCCAGCCCTGTTGATTT+TGG + tig0003001:3087-3106 Msa1339020:CDS 55.0%
!!! GCGCCAGCCCTGTTGATTTT+GGG + tig0003001:3088-3107 Msa1339020:CDS 55.0%
!! GGTGGATTTGGTGTTGGTGG+TGG + tig0003001:3142-3161 Msa1339020:CDS 55.0%
GGTGGCTCCACTGGTAAGAA+TGG + tig0003001:3160-3179 Msa1339020:CDS 55.0%
! AGATGTTGCTGGCTGTGACG+AGG + tig0003001:3441-3460 Msa1339020:CDS 55.0%
!!! CCCACCAGAAGAGCACCTTT+TGG - tig0003001:3541-3560 None:intergenic 55.0%
! AGGGTTTTTCCTGTGCCTGG+GGG - tig0003001:3565-3584 None:intergenic 55.0%
AAAGCAACTGCAGGGGAGTC+TGG + tig0003001:3592-3611 Msa1339020:CDS 55.0%
!! TTGTCGGTGTTGGACCATCC+AGG + tig0003001:3659-3678 Msa1339020:CDS 55.0%
!! TGTCGGTGTTGGACCATCCA+GGG + tig0003001:3660-3679 Msa1339020:CDS 55.0%
ATTGGTCGGAAAAGGGGTCG+TGG + tig0003001:3751-3770 Msa1339020:CDS 55.0%
GCTGGAGTTGTTGTGCTAGC+AGG + tig0003001:3853-3872 Msa1339020:CDS 55.0%
GACAACGCCTTACTTAGGCC+TGG + tig0003001:3898-3917 Msa1339020:CDS 55.0%
GCCCTTACTCCAGGATTTGC+TGG + tig0003001:4045-4064 Msa1339020:CDS 55.0%
CAACAGCATGGCCTGCTTCA+TGG - tig0003001:4704-4723 None:intergenic 55.0%
GCTGCTCCTTTGTCCTGAGA+AGG - tig0003001:4827-4846 None:intergenic 55.0%
AACCACCGTCGATGAAGCCA+AGG + tig0003001:5562-5581 Msa1339020:CDS 55.0%
ACCGTCGATGAAGCCAAGGA+GGG + tig0003001:5566-5585 Msa1339020:CDS 55.0%
ACCCTCCTTGGCTTCATCGA+CGG - tig0003001:5570-5589 None:intergenic 55.0%
ATGAAGCCAAGGAGGGTGGT+GGG + tig0003001:5573-5592 Msa1339020:CDS 55.0%
!! GTCTTCCCCTCTAGAACCTG+AGG + tig0003001:5595-5614 Msa1339020:CDS 55.0%
TGGTCCTCGTGATCAGCAGC+AGG + tig0003001:1406-1425 Msa1339020:CDS 60.0%
!! GGTCACCGTTTTGGGCCACT+CGG + tig0003001:1713-1732 Msa1339020:intron 60.0%
!! GTCACCGTTTTGGGCCACTC+GGG + tig0003001:1714-1733 Msa1339020:intron 60.0%
GTGACCCGAGTGGCCCAAAA+CGG - tig0003001:1721-1740 None:intergenic 60.0%
TGGCCACCAGATCCCTTTGC+AGG - tig0003001:2920-2939 None:intergenic 60.0%
AGGGGTCGTGGAGGTTTCTC+TGG + tig0003001:3763-3782 Msa1339020:CDS 60.0%
ATCGTGCGGTCAAAACGCCC+AGG - tig0003001:3919-3938 None:intergenic 60.0%
AGGCTTGCAGCCCTTACTCC+AGG + tig0003001:4036-4055 Msa1339020:CDS 60.0%
GAAGCAGGCCATGCTGTTGC+AGG + tig0003001:4705-4724 Msa1339020:CDS 60.0%
CAGGCCATGCTGTTGCAGGT+TGG + tig0003001:4709-4728 Msa1339020:CDS 60.0%
CTCCTTGGCTTCATCGACGG+TGG - tig0003001:5567-5586 None:intergenic 60.0%
CACCGTCGATGAAGCCAAGG+AGG + tig0003001:5565-5584 Msa1339020:CDS 60.0%
GTCGATGAAGCCAAGGAGGG+TGG + tig0003001:5569-5588 Msa1339020:CDS 60.0%
GATGAAGCCAAGGAGGGTGG+TGG + tig0003001:5572-5591 Msa1339020:CDS 60.0%
! CATCTGGAGCGTGACCCGAG+TGG - tig0003001:1731-1750 None:intergenic 65.0%
!! GGTGTTGGTGGTGGCTCCAC+TGG + tig0003001:3151-3170 Msa1339020:CDS 65.0%
GGTCGGAAAAGGGGTCGTGG+AGG + tig0003001:3754-3773 Msa1339020:CDS 65.0%
CTCGCGGCACAGCAGCACTT+GGG + tig0003001:4775-4794 Msa1339020:CDS 65.0%
GGAAGACCCACCACCCTCCT+TGG - tig0003001:5582-5601 None:intergenic 65.0%
GTGCAGGTGCCCGCGGATCT+TGG - tig0003001:1690-1709 None:intergenic 70.0%
ATCCGCGGGCACCTGCACTC+AGG + tig0003001:1692-1711 Msa1339020:intron 70.0%
GACCTGAGTGCAGGTGCCCG+CGG - tig0003001:1697-1716 None:intergenic 70.0%
! GCTCTTCTGGTGGGTCCCCC+AGG + tig0003001:3547-3566 Msa1339020:CDS 70.0%
! CCAAGTGCTGCTGTGCCGCG+AGG - tig0003001:4777-4796 None:intergenic 70.0%
CCTCGCGGCACAGCAGCACT+TGG + tig0003001:4774-4793 Msa1339020:CDS 70.0%
CTCGGCAGCCCGACCACCAA+GGG - tig0003001:4871-4890 None:intergenic 70.0%
! CTGGTGGGTCCCCCAGGCAC+AGG + tig0003001:3553-3572 Msa1339020:CDS 75.0%
GCTCGGCAGCCCGACCACCA+AGG - tig0003001:4872-4891 None:intergenic 75.0%
TGGTGGTCGGGCTGCCGAGC+AGG + tig0003001:4872-4891 Msa1339020:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0003001 gene 242 5815 242 ID=Msa1339020;Name=Msa1339020
tig0003001 mRNA 242 5815 242 ID=Msa1339020-mRNA-1;Parent=Msa1339020;Name=Msa1339020-mRNA-1;_AED=0.03;_eAED=0.03;_QI=147|1|1|1|1|1|8|184|807
tig0003001 exon 242 439 242 ID=Msa1339020-mRNA-1:exon:1917;Parent=Msa1339020-mRNA-1
tig0003001 exon 522 744 522 ID=Msa1339020-mRNA-1:exon:1918;Parent=Msa1339020-mRNA-1
tig0003001 exon 851 922 851 ID=Msa1339020-mRNA-1:exon:1919;Parent=Msa1339020-mRNA-1
tig0003001 exon 1288 1427 1288 ID=Msa1339020-mRNA-1:exon:1920;Parent=Msa1339020-mRNA-1
tig0003001 exon 2776 3246 2776 ID=Msa1339020-mRNA-1:exon:1921;Parent=Msa1339020-mRNA-1
tig0003001 exon 3430 4197 3430 ID=Msa1339020-mRNA-1:exon:1922;Parent=Msa1339020-mRNA-1
tig0003001 exon 4666 4893 4666 ID=Msa1339020-mRNA-1:exon:1923;Parent=Msa1339020-mRNA-1
tig0003001 exon 5161 5815 5161 ID=Msa1339020-mRNA-1:exon:1924;Parent=Msa1339020-mRNA-1
tig0003001 five_prime_UTR 242 388 242 ID=Msa1339020-mRNA-1:five_prime_utr;Parent=Msa1339020-mRNA-1
tig0003001 CDS 389 439 389 ID=Msa1339020-mRNA-1:cds;Parent=Msa1339020-mRNA-1
tig0003001 CDS 522 744 522 ID=Msa1339020-mRNA-1:cds;Parent=Msa1339020-mRNA-1
tig0003001 CDS 851 922 851 ID=Msa1339020-mRNA-1:cds;Parent=Msa1339020-mRNA-1
tig0003001 CDS 1288 1427 1288 ID=Msa1339020-mRNA-1:cds;Parent=Msa1339020-mRNA-1
tig0003001 CDS 2776 3246 2776 ID=Msa1339020-mRNA-1:cds;Parent=Msa1339020-mRNA-1
tig0003001 CDS 3430 4197 3430 ID=Msa1339020-mRNA-1:cds;Parent=Msa1339020-mRNA-1
tig0003001 CDS 4666 4893 4666 ID=Msa1339020-mRNA-1:cds;Parent=Msa1339020-mRNA-1
tig0003001 CDS 5161 5631 5161 ID=Msa1339020-mRNA-1:cds;Parent=Msa1339020-mRNA-1
tig0003001 three_prime_UTR 5632 5815 5632 ID=Msa1339020-mRNA-1:three_prime_utr;Parent=Msa1339020-mRNA-1
Gene Sequence

>Msa1339020

ATGATTTTTTCAAGAATTGGGCGTTCTCTATCGCGTTCTTCTCGCGTTAAAAATTTGTTGCACGGTGAAGCAAGATTGGGAACGCTTTATGGAGTTTCGAGAACGAATGTTTTTATCGATGATGTTGAAAATGGATTAGGGTTTTTAAGGGGTTATGTATCTTCTGCCATAGCTCGTAATAATGGGTTTGCTTCAAATTTGTATGATTTTAAATCAATTGCTGCAAACCCTAGGCTTCATCGCATGTTTTCGAGCGAATCCCCAAAGAAAAAGAATTATGAAAAGTTTTATCCCAAGGAAAAGAAGGAAGTGCCAAAGGGAGAGGAGAAAAAATCTGAGTCTAAAGATGAGTCAAAGTCAAACACAGAGGATGGAGGAAGTTTTCACGAAGCTTTTATCAAACAGTTTCAAAACTATCTCACCCCATTGTTGGTGGTGGGACTATTTCTTTCATCCCTTTCTCTTGGTCCTCGTGATCAGCAGCAGATTAGTTTCCAGGAGTTTAAAAATAAGCTTTTGGAACCAGGATTAGTAGACCATATTGTTGTCTCCAACAAATCAGTTGCCAAAATATATGTGAGGAACTCTCCCCTTAATCAAGCAGACAGCGAAGTCCAAGGAACCCTTCCTGCAAAGGGATCTGGTGGCCAATTTAAATATGTAATCAATATTGGAAGTGTTGAGTCTTTTGAGGAGAAGTTAGAGGAAGCGCAAGAAGCACTAGGCGTTGACTCTCACAATTTTGTACCTGTTATATATTCTTCTGAAATGGTTTGGTACCAGGAGTTAATGAGATTTGCGCCAGCCCTGTTGATTTTGGGAACTCTCTGGTTTATGGGAAGGAAAGTGCAAGGTGGATTTGGTGTTGGTGGTGGCTCCACTGGTAAGAATGGTCGTGGAATATTTAACATTGGAAAAGCACATGTTACTAAAGTAGACAAAAATACCAAAAACAAGGTTTATTTTAAAGATGTTGCTGGCTGTGACGAGGCAAAGCAAGAAATTATGGAGTTTGTGCACTTCCTCAAGAATCCTAAGAAATACGAAGAGCTTGGTGCCAAAATTCCAAAAGGTGCTCTTCTGGTGGGTCCCCCAGGCACAGGAAAAACCCTTTTAGCAAAAGCAACTGCAGGGGAGTCTGGTGTGCCATTTCTTTCCATATCTGGTTCTGATTTCATGGAAATGTTTGTCGGTGTTGGACCATCCAGGGTGAGAAACTTGTTTCTGGAAGCAAGGCAGTGTGCTCCCAGTATAGTATTTATTGATGAGATTGATGCAATTGGTCGGAAAAGGGGTCGTGGAGGTTTCTCTGGTTCAAATGATGAGCGTGAAAGTACTTTAAATCAATTGTTGGTGGAAATGGATGGTTTTGGAACCACTGCTGGAGTTGTTGTGCTAGCAGGTACAAATAGAGCTGATATATTAGACAACGCCTTACTTAGGCCTGGGCGTTTTGACCGCACGATATCAATTGATGTACCTGACATTAAAGGTCGTGACCAGATATTTCAGATTTATTTGAAAAAAATCAAACTTGACCACGAGCCTTCATATTATTCTCAAAGGCTTGCAGCCCTTACTCCAGGATTTGCTGGAGCAGACATTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGGACTGATGAATCACAAGTCACAATGGATCATTTTGAGGCAGCTATCGATAGGATCATTGGTGGTTTGGAGAAGAAGAACAGGGTAATAAGTAAGCTGGAAAGGCGTACCGTTGCTTACCATGAAGCAGGCCATGCTGTTGCAGGTTGGTTCTTGGAACATTGTGAGCCATTGTTGAAAGTAACTATTGTTCCTCGCGGCACAGCAGCACTTGGGTTTGCCCAATATGTTCCTAGTGAGAACCTTCTCAGGACAAAGGAGCAGCTTTTGGATATGACTTGTATGACCCTTGGTGGTCGGGCTGCCGAGCAGGTTCTCATTGGAGCAATCTCCACTGGAGCACAAAATGACTTGGAGAAAGTGACCAAGATGACATATGCCCAAATAGCCATCTATGGTTTCAGTGAAAAAGTGGGCCTCCTCTCTTTCCCTCAAAATGACGACGCGTTTGGGAAACCATACAGCGGCGATACTGGTAACATCATTGATCAGGAAGTGCGAGATTGGGTGAAACATGCATATGAACGTACCATACAGCTTATAGAAGAACACAAGGAGAAAATAGCTCAAATTGCAGAGTTACTTCTCGAAAAAGAAGTACTTCACCAAGATGACTTGGTTCGAATCTTGGGTGAACGACCCTTCAAGAGTGCAGAACCTACAAATTACGATAGATTTAAGCTAGGGTTTCAAGATGAGGAGAAAGCTGCAGAAACCACCGTCGATGAAGCCAAGGAGGGTGGTGGGTCTTCCCCTCTAGAACCTGAGGTTGTTCCCACATAG
Protein sequence

>Msa1339020

MIFSRIGRSLSRSSRVKNLLHGEARLGTLYGVSRTNVFIDDVENGLGFLRGYVSSAIARNNGFASNLYDFKSIAANPRLHRMFSSESPKKKNYEKFYPKEKKEVPKGEEKKSESKDESKSNTEDGGSFHEAFIKQFQNYLTPLLVVGLFLSSLSLGPRDQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKIYVRNSPLNQADSEVQGTLPAKGSGGQFKYVINIGSVESFEEKLEEAQEALGVDSHNFVPVIYSSEMVWYQELMRFAPALLILGTLWFMGRKVQGGFGVGGGSTGKNGRGIFNIGKAHVTKVDKNTKNKVYFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFLEARQCAPSIVFIDEIDAIGRKRGRGGFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRADILDNALLRPGRFDRTISIDVPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARTDESQVTMDHFEAAIDRIIGGLEKKNRVISKLERRTVAYHEAGHAVAGWFLEHCEPLLKVTIVPRGTAALGFAQYVPSENLLRTKEQLLDMTCMTLGGRAAEQVLIGAISTGAQNDLEKVTKMTYAQIAIYGFSEKVGLLSFPQNDDAFGKPYSGDTGNIIDQEVRDWVKHAYERTIQLIEEHKEKIAQIAELLLEKEVLHQDDLVRILGERPFKSAEPTNYDRFKLGFQDEEKAAETTVDEAKEGGGSSPLEPEVVPT*