Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827870 | XP_003616702.1 | 98.765 | 567 | 7 | 0 | 1 | 567 | 1 | 567 | 0.0 | 1167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827870 | sp|Q9SIY8|LAC5_ARATH | 76.316 | 570 | 126 | 3 | 7 | 567 | 11 | 580 | 0.0 | 932 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827870 | G7K780 | 98.765 | 567 | 7 | 0 | 1 | 567 | 1 | 567 | 0.0 | 1167 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0603120 | Msa0827870 | 0.811191 | 7.922442e-51 | -8.615850e-47 |
| Msa0612350 | Msa0827870 | 0.835858 | 1.313905e-56 | -8.615850e-47 |
| Msa0625780 | Msa0827870 | 0.815315 | 9.843943e-52 | -8.615850e-47 |
| Msa0644150 | Msa0827870 | 0.814314 | 1.640809e-51 | -8.615850e-47 |
| Msa0663480 | Msa0827870 | 0.804441 | 2.157179e-49 | -8.615850e-47 |
| Msa0683960 | Msa0827870 | 0.823854 | 1.107093e-53 | -8.615850e-47 |
| Msa0687580 | Msa0827870 | 0.807477 | 4.959689e-50 | -8.615850e-47 |
| Msa0737690 | Msa0827870 | 0.830543 | 2.768474e-55 | -8.615850e-47 |
| Msa0783850 | Msa0827870 | 0.940152 | 3.798412e-100 | -8.615850e-47 |
| Msa0816830 | Msa0827870 | 0.813768 | 2.165066e-51 | -8.615850e-47 |
| Msa0818710 | Msa0827870 | 0.800080 | 1.704350e-48 | -8.615850e-47 |
| Msa0818720 | Msa0827870 | 0.993004 | 7.959315e-197 | -8.615850e-47 |
| Msa0818760 | Msa0827870 | 0.998779 | 2.574624e-276 | -8.615850e-47 |
| Msa0827870 | Msa0857030 | 0.828657 | 7.960345e-55 | -8.615850e-47 |
| Msa0827870 | Msa1170890 | 0.988058 | 1.492074e-172 | -8.615850e-47 |
| Msa0827870 | Msa1349730 | 0.803870 | 2.836286e-49 | -8.615850e-47 |
| Msa0827870 | Msa1459360 | 0.800990 | 1.112232e-48 | -8.615850e-47 |
| Msa0389460 | Msa0827870 | 0.990343 | 3.474408e-182 | -8.615850e-47 |
| Msa0548100 | Msa0827870 | 0.802731 | 4.880374e-49 | -8.615850e-47 |
| Msa0585840 | Msa0827870 | 0.801960 | 7.034840e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827870 | MtrunA17_Chr5g0437681 | 98.765 | 567 | 7 | 0 | 1 | 567 | 1 | 567 | 0.0 | 1167 |
| Msa0827870 | MtrunA17_Chr3g0114211 | 81.162 | 568 | 96 | 3 | 4 | 567 | 10 | 570 | 0.0 | 969 |
| Msa0827870 | MtrunA17_Chr5g0431581 | 59.507 | 568 | 221 | 4 | 1 | 567 | 1 | 560 | 0.0 | 728 |
| Msa0827870 | MtrunA17_Chr5g0404361 | 50.265 | 565 | 261 | 5 | 7 | 567 | 63 | 611 | 0.0 | 604 |
| Msa0827870 | MtrunA17_Chr5g0404341 | 50.970 | 567 | 256 | 7 | 7 | 567 | 16 | 566 | 0.0 | 595 |
| Msa0827870 | MtrunA17_Chr7g0238941 | 52.021 | 569 | 254 | 9 | 9 | 567 | 19 | 578 | 0.0 | 590 |
| Msa0827870 | MtrunA17_Chr7g0237491 | 51.215 | 576 | 263 | 11 | 4 | 567 | 11 | 580 | 0.0 | 585 |
| Msa0827870 | MtrunA17_Chr7g0238981 | 49.914 | 583 | 264 | 9 | 7 | 567 | 17 | 593 | 0.0 | 583 |
| Msa0827870 | MtrunA17_Chr4g0031901 | 52.057 | 559 | 245 | 11 | 7 | 551 | 20 | 569 | 0.0 | 580 |
| Msa0827870 | MtrunA17_Chr5g0429511 | 49.291 | 564 | 266 | 7 | 8 | 567 | 11 | 558 | 0.0 | 579 |
| Msa0827870 | MtrunA17_Chr4g0005921 | 49.562 | 571 | 270 | 6 | 1 | 567 | 1 | 557 | 0.0 | 578 |
| Msa0827870 | MtrunA17_Chr7g0237441 | 49.913 | 575 | 268 | 10 | 6 | 567 | 13 | 580 | 0.0 | 576 |
| Msa0827870 | MtrunA17_Chr2g0278811 | 47.119 | 590 | 272 | 6 | 11 | 567 | 25 | 607 | 0.0 | 574 |
| Msa0827870 | MtrunA17_Chr7g0238351 | 50.089 | 563 | 263 | 11 | 16 | 567 | 26 | 581 | 0.0 | 569 |
| Msa0827870 | MtrunA17_Chr5g0436461 | 49.735 | 567 | 261 | 7 | 8 | 567 | 5 | 554 | 0.0 | 564 |
| Msa0827870 | MtrunA17_Chr3g0104061 | 48.596 | 570 | 272 | 8 | 2 | 567 | 4 | 556 | 0.0 | 559 |
| Msa0827870 | MtrunA17_Chr7g0240971 | 49.223 | 579 | 273 | 9 | 1 | 567 | 1 | 570 | 0.0 | 546 |
| Msa0827870 | MtrunA17_Chr4g0008521 | 49.101 | 556 | 260 | 8 | 25 | 567 | 27 | 572 | 0.0 | 535 |
| Msa0827870 | MtrunA17_Chr7g0240991 | 45.899 | 573 | 284 | 10 | 10 | 567 | 10 | 571 | 0.0 | 534 |
| Msa0827870 | MtrunA17_Chr8g0346581 | 44.786 | 585 | 291 | 6 | 1 | 567 | 1 | 571 | 1.03e-179 | 519 |
| Msa0827870 | MtrunA17_Chr3g0133861 | 46.707 | 334 | 164 | 6 | 226 | 553 | 1 | 326 | 2.01e-101 | 310 |
| Msa0827870 | MtrunA17_Chr3g0133871 | 50.233 | 215 | 99 | 2 | 1 | 208 | 3 | 216 | 9.32e-73 | 232 |
| Msa0827870 | MtrunA17_Chr8g0382691 | 31.058 | 586 | 320 | 20 | 19 | 567 | 29 | 567 | 5.77e-72 | 241 |
| Msa0827870 | MtrunA17_Chr3g0118321 | 30.716 | 573 | 324 | 19 | 7 | 545 | 12 | 545 | 3.42e-70 | 236 |
| Msa0827870 | MtrunA17_Chr3g0118331 | 30.185 | 593 | 351 | 17 | 1 | 564 | 1 | 559 | 3.60e-70 | 236 |
| Msa0827870 | MtrunA17_Chr5g0436431 | 44.958 | 238 | 112 | 5 | 292 | 525 | 6 | 228 | 1.24e-60 | 200 |
| Msa0827870 | MtrunA17_Chr8g0374271 | 28.081 | 495 | 305 | 15 | 38 | 527 | 45 | 493 | 1.13e-42 | 160 |
| Msa0827870 | MtrunA17_Chr4g0056511 | 28.922 | 529 | 331 | 17 | 11 | 527 | 14 | 509 | 7.54e-42 | 159 |
| Msa0827870 | MtrunA17_Chr3g0079321 | 25.868 | 576 | 383 | 20 | 3 | 567 | 9 | 551 | 5.57e-40 | 153 |
| Msa0827870 | MtrunA17_Chr4g0024861 | 26.908 | 498 | 300 | 14 | 42 | 527 | 45 | 490 | 5.20e-38 | 147 |
| Msa0827870 | MtrunA17_Chr8g0374261 | 27.007 | 548 | 320 | 19 | 7 | 533 | 9 | 497 | 3.19e-37 | 145 |
| Msa0827870 | MtrunA17_Chr5g0402831 | 27.525 | 505 | 292 | 17 | 38 | 527 | 45 | 490 | 7.27e-37 | 144 |
| Msa0827870 | MtrunA17_Chr1g0157341 | 25.852 | 499 | 316 | 13 | 42 | 533 | 47 | 498 | 1.05e-36 | 143 |
| Msa0827870 | MtrunA17_Chr4g0038671 | 25.000 | 564 | 372 | 15 | 8 | 567 | 16 | 532 | 2.03e-36 | 142 |
| Msa0827870 | MtrunA17_Chr3g0143671 | 25.992 | 504 | 309 | 15 | 42 | 533 | 48 | 499 | 6.03e-36 | 141 |
| Msa0827870 | MtrunA17_Chr2g0322441 | 26.735 | 490 | 311 | 12 | 42 | 527 | 48 | 493 | 4.55e-35 | 139 |
| Msa0827870 | MtrunA17_Chr7g0234061 | 27.011 | 522 | 326 | 17 | 27 | 532 | 32 | 514 | 3.75e-33 | 134 |
| Msa0827870 | MtrunA17_Chr3g0118351 | 30.000 | 350 | 201 | 10 | 236 | 564 | 5 | 331 | 5.86e-33 | 129 |
| Msa0827870 | MtrunA17_Chr3g0121151 | 24.816 | 544 | 348 | 15 | 38 | 567 | 80 | 576 | 4.62e-32 | 130 |
| Msa0827870 | MtrunA17_Chr3g0121171 | 25.000 | 544 | 347 | 15 | 38 | 567 | 1190 | 1686 | 1.06e-31 | 131 |
| Msa0827870 | MtrunA17_Chr3g0121171 | 24.816 | 544 | 348 | 15 | 38 | 567 | 40 | 536 | 4.59e-31 | 129 |
| Msa0827870 | MtrunA17_Chr3g0121171 | 24.449 | 544 | 350 | 14 | 38 | 567 | 615 | 1111 | 1.01e-30 | 128 |
| Msa0827870 | MtrunA17_Chr3g0121171 | 24.297 | 498 | 324 | 14 | 80 | 567 | 1798 | 2252 | 8.55e-26 | 113 |
| Msa0827870 | MtrunA17_Chr3g0121161 | 25.185 | 540 | 351 | 14 | 38 | 567 | 80 | 576 | 1.64e-31 | 129 |
| Msa0827870 | MtrunA17_Chr4g0043261 | 24.953 | 537 | 343 | 16 | 11 | 533 | 7 | 497 | 7.83e-31 | 126 |
| Msa0827870 | MtrunA17_Chr4g0075071 | 26.030 | 534 | 336 | 20 | 5 | 527 | 9 | 494 | 1.08e-28 | 120 |
| Msa0827870 | MtrunA17_Chr4g0043251 | 25.520 | 529 | 355 | 14 | 42 | 567 | 45 | 537 | 1.71e-28 | 119 |
| Msa0827870 | MtrunA17_Chr3g0118341 | 35.829 | 187 | 111 | 6 | 1 | 183 | 1 | 182 | 1.60e-26 | 107 |
| Msa0827870 | MtrunA17_Chr4g0024641 | 25.328 | 458 | 291 | 16 | 76 | 527 | 1 | 413 | 1.34e-22 | 102 |
| Msa0827870 | MtrunA17_Chr5g0436411 | 42.667 | 75 | 40 | 1 | 8 | 79 | 5 | 79 | 2.73e-11 | 59.7 |
| Msa0827870 | MtrunA17_Chr3g0118931 | 36.232 | 69 | 44 | 0 | 477 | 545 | 10 | 78 | 8.16e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827870 | AT2G40370.1 | 76.316 | 570 | 126 | 3 | 7 | 567 | 11 | 580 | 0.0 | 932 |
| Msa0827870 | AT5G05390.1 | 76.937 | 568 | 124 | 2 | 1 | 567 | 4 | 565 | 0.0 | 928 |
| Msa0827870 | AT2G30210.1 | 64.336 | 572 | 197 | 4 | 1 | 567 | 1 | 570 | 0.0 | 798 |
| Msa0827870 | AT5G07130.1 | 65.674 | 571 | 190 | 6 | 1 | 567 | 1 | 569 | 0.0 | 775 |
| Msa0827870 | AT5G07130.2 | 65.844 | 486 | 160 | 6 | 86 | 567 | 1 | 484 | 0.0 | 653 |
| Msa0827870 | AT5G07130.3 | 65.844 | 486 | 160 | 6 | 86 | 567 | 1 | 484 | 0.0 | 653 |
| Msa0827870 | AT5G09360.1 | 51.579 | 570 | 261 | 7 | 1 | 567 | 12 | 569 | 0.0 | 607 |
| Msa0827870 | AT2G29130.1 | 51.295 | 579 | 249 | 11 | 8 | 567 | 9 | 573 | 0.0 | 590 |
| Msa0827870 | AT5G60020.1 | 49.654 | 578 | 269 | 11 | 7 | 567 | 5 | 577 | 0.0 | 571 |
| Msa0827870 | AT5G03260.1 | 49.472 | 568 | 264 | 7 | 7 | 567 | 6 | 557 | 0.0 | 570 |
| Msa0827870 | AT5G60020.3 | 51.188 | 547 | 248 | 10 | 35 | 567 | 4 | 545 | 0.0 | 565 |
| Msa0827870 | AT2G38080.1 | 47.880 | 566 | 273 | 8 | 7 | 567 | 10 | 558 | 0.0 | 565 |
| Msa0827870 | AT5G01190.1 | 49.912 | 565 | 263 | 6 | 9 | 567 | 8 | 558 | 0.0 | 561 |
| Msa0827870 | AT3G09220.1 | 50.091 | 549 | 254 | 7 | 11 | 550 | 13 | 550 | 0.0 | 560 |
| Msa0827870 | AT5G58910.2 | 46.290 | 566 | 286 | 8 | 8 | 567 | 14 | 567 | 0.0 | 547 |
| Msa0827870 | AT5G01190.2 | 51.423 | 527 | 238 | 5 | 45 | 567 | 32 | 544 | 0.0 | 544 |
| Msa0827870 | AT5G58910.3 | 46.290 | 566 | 285 | 9 | 8 | 567 | 14 | 566 | 0.0 | 543 |
| Msa0827870 | AT5G48100.1 | 46.835 | 553 | 278 | 9 | 4 | 551 | 6 | 547 | 0.0 | 533 |
| Msa0827870 | AT2G46570.1 | 45.645 | 574 | 288 | 6 | 4 | 567 | 10 | 569 | 0.0 | 531 |
| Msa0827870 | AT1G18140.1 | 48.301 | 559 | 262 | 12 | 27 | 567 | 32 | 581 | 0.0 | 525 |
| Msa0827870 | AT5G01040.1 | 45.724 | 573 | 285 | 9 | 5 | 567 | 10 | 566 | 0.0 | 523 |
| Msa0827870 | AT5G60020.2 | 49.440 | 536 | 249 | 11 | 7 | 525 | 5 | 535 | 1.56e-180 | 520 |
| Msa0827870 | AT5G58910.1 | 46.580 | 541 | 264 | 9 | 33 | 567 | 2 | 523 | 4.29e-180 | 518 |
| Msa0827870 | AT5G01050.1 | 45.565 | 575 | 285 | 8 | 5 | 567 | 10 | 568 | 7.16e-179 | 518 |
| Msa0827870 | AT2G46570.2 | 46.667 | 495 | 242 | 5 | 81 | 567 | 4 | 484 | 1.31e-163 | 475 |
| Msa0827870 | AT3G09220.2 | 50.647 | 464 | 209 | 7 | 96 | 550 | 1 | 453 | 5.33e-163 | 473 |
| Msa0827870 | AT5G21100.1 | 31.434 | 579 | 325 | 20 | 19 | 564 | 19 | 558 | 1.19e-73 | 245 |
| Msa0827870 | AT4G39830.1 | 30.921 | 608 | 338 | 22 | 1 | 567 | 11 | 577 | 8.54e-72 | 241 |
| Msa0827870 | AT5G21105.1 | 30.651 | 584 | 340 | 18 | 11 | 564 | 25 | 573 | 1.83e-69 | 234 |
| Msa0827870 | AT5G21105.3 | 30.092 | 545 | 320 | 17 | 11 | 525 | 25 | 538 | 1.94e-59 | 207 |
| Msa0827870 | AT4G39830.2 | 30.134 | 521 | 285 | 20 | 85 | 567 | 3 | 482 | 7.82e-52 | 185 |
| Msa0827870 | AT4G39830.3 | 30.000 | 520 | 285 | 20 | 86 | 567 | 2 | 480 | 4.85e-51 | 182 |
| Msa0827870 | AT4G39830.4 | 29.480 | 519 | 278 | 18 | 85 | 567 | 3 | 469 | 4.18e-49 | 177 |
| Msa0827870 | AT5G66920.1 | 27.017 | 533 | 333 | 16 | 42 | 567 | 55 | 538 | 7.23e-44 | 164 |
| Msa0827870 | AT4G12420.1 | 27.586 | 551 | 341 | 20 | 1 | 532 | 1 | 512 | 1.97e-43 | 164 |
| Msa0827870 | AT4G12420.2 | 27.586 | 551 | 341 | 20 | 1 | 532 | 1 | 512 | 1.97e-43 | 164 |
| Msa0827870 | AT1G75790.1 | 26.527 | 524 | 344 | 12 | 7 | 527 | 10 | 495 | 1.57e-42 | 160 |
| Msa0827870 | AT5G51480.1 | 26.418 | 564 | 368 | 16 | 17 | 567 | 21 | 550 | 2.46e-41 | 158 |
| Msa0827870 | AT1G21860.1 | 25.898 | 529 | 338 | 15 | 11 | 533 | 16 | 496 | 3.79e-39 | 150 |
| Msa0827870 | AT1G76160.1 | 24.811 | 528 | 354 | 14 | 7 | 533 | 11 | 496 | 1.48e-38 | 149 |
| Msa0827870 | AT4G25240.2 | 26.562 | 576 | 371 | 18 | 8 | 567 | 11 | 550 | 1.23e-36 | 144 |
| Msa0827870 | AT4G25240.1 | 26.562 | 576 | 371 | 18 | 8 | 567 | 11 | 550 | 1.23e-36 | 144 |
| Msa0827870 | AT5G21105.2 | 29.781 | 366 | 215 | 11 | 208 | 564 | 50 | 382 | 1.49e-36 | 140 |
| Msa0827870 | AT1G21850.1 | 25.836 | 538 | 336 | 18 | 7 | 533 | 11 | 496 | 8.88e-36 | 141 |
| Msa0827870 | AT1G41830.1 | 25.651 | 538 | 340 | 19 | 6 | 533 | 10 | 497 | 1.19e-35 | 140 |
| Msa0827870 | AT5G48450.2 | 25.357 | 560 | 370 | 18 | 9 | 564 | 13 | 528 | 2.25e-34 | 137 |
| Msa0827870 | AT5G48450.1 | 25.357 | 560 | 370 | 18 | 9 | 564 | 13 | 528 | 2.72e-34 | 137 |
| Msa0827870 | AT4G22010.1 | 26.226 | 530 | 336 | 17 | 6 | 527 | 8 | 490 | 7.09e-33 | 132 |
| Msa0827870 | AT2G23630.1 | 27.239 | 536 | 329 | 17 | 42 | 567 | 48 | 532 | 4.42e-31 | 127 |
| Msa0827870 | AT2G23630.2 | 27.239 | 536 | 329 | 17 | 42 | 567 | 53 | 537 | 5.61e-31 | 127 |
| Msa0827870 | AT4G37160.1 | 26.224 | 572 | 356 | 16 | 10 | 567 | 15 | 534 | 1.12e-30 | 126 |
| Msa0827870 | AT1G55570.1 | 25.558 | 493 | 321 | 12 | 42 | 527 | 47 | 500 | 1.01e-28 | 120 |
| Msa0827870 | AT3G13390.1 | 25.391 | 512 | 332 | 12 | 25 | 527 | 29 | 499 | 4.96e-28 | 118 |
| Msa0827870 | AT1G55560.1 | 25.000 | 536 | 333 | 18 | 42 | 564 | 44 | 523 | 5.51e-28 | 118 |
| Msa0827870 | AT4G28090.1 | 23.944 | 497 | 325 | 15 | 45 | 533 | 49 | 500 | 1.54e-27 | 117 |
| Msa0827870 | AT3G13400.2 | 25.451 | 499 | 313 | 15 | 42 | 527 | 45 | 497 | 1.91e-25 | 110 |
| Msa0827870 | AT3G13400.1 | 25.451 | 499 | 313 | 15 | 42 | 527 | 45 | 497 | 1.91e-25 | 110 |
| Msa0827870 | AT4G37160.2 | 30.032 | 313 | 201 | 5 | 10 | 319 | 15 | 312 | 1.54e-24 | 107 |
| Msa0827870 | AT4G38420.1 | 23.279 | 494 | 329 | 15 | 42 | 527 | 48 | 499 | 2.54e-22 | 101 |
| Msa0827870 | AT4G38420.2 | 27.386 | 241 | 165 | 5 | 42 | 281 | 48 | 279 | 5.82e-20 | 93.2 |
| Msa0827870 | AT4G38420.3 | 27.386 | 241 | 165 | 5 | 42 | 281 | 48 | 279 | 1.10e-19 | 92.8 |
Find 152 sgRNAs with CRISPR-Local
Find 520 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAAAAGCTTTAGAAGTTTA+AGG | 0.083519 | 5_3:-69415726 | Msa0827870:CDS |
| ACCTATAGATTTACCATTAA+TGG | 0.101466 | 5_3:-69417118 | Msa0827870:CDS |
| CACCTACTACTGTTAGTTTA+TGG | 0.135494 | 5_3:+69416028 | None:intergenic |
| TGTACCTTCTTGTCCATTAA+TGG | 0.180702 | 5_3:+69417105 | None:intergenic |
| TGGCTTAGAGCCACAGTTTA+TGG | 0.186697 | 5_3:-69417058 | Msa0827870:CDS |
| AAAACATATACGCTCATATT+TGG | 0.224570 | 5_3:+69414234 | None:intergenic |
| CGTGAAACACCCATTCTTCT+AGG | 0.253813 | 5_3:-69416980 | Msa0827870:intron |
| ACAATTGTTCCAATTGATTC+AGG | 0.259031 | 5_3:-69416117 | Msa0827870:CDS |
| TATATTGTTGCTGAGGGATT+TGG | 0.270036 | 5_3:-69415304 | Msa0827870:CDS |
| ACTGTTGCTGTACCTGTTAA+TGG | 0.271612 | 5_3:-69415220 | Msa0827870:CDS |
| TCTGATGCATACACTATTAA+TGG | 0.273121 | 5_3:-69416557 | Msa0827870:CDS |
| ATTGTTTGTTTCCCTGCATT+GGG | 0.279523 | 5_3:-69414469 | Msa0827870:three_prime_UTR |
| CCAACTTTGGAAATTAATAA+TGG | 0.283923 | 5_3:-69417992 | Msa0827870:CDS |
| AAAGTTACTAAGTTGAGATT+TGG | 0.284792 | 5_3:-69415409 | Msa0827870:CDS |
| GGTGGCATGCTCATAGTTCA+TGG | 0.302145 | 5_3:-69417078 | Msa0827870:CDS |
| TGAGGACCTGCCTTTGTGTT+AGG | 0.313647 | 5_3:-69414539 | Msa0827870:exon |
| GTGCAGCATTGATTACTCTT+AGG | 0.316195 | 5_3:+69416082 | None:intergenic |
| GTGTATGCATCAGATATATT+TGG | 0.328938 | 5_3:+69416566 | None:intergenic |
| CATTGTTTGTTTCCCTGCAT+TGG | 0.329323 | 5_3:-69414470 | Msa0827870:three_prime_UTR |
| CTAGTATCAATTTAACCAAT+AGG | 0.331374 | 5_3:+69414330 | None:intergenic |
| GGACATTGAGTCACAAATTC+TGG | 0.334936 | 5_3:+69417163 | None:intergenic |
| AGATCTTCATCAATTTCATT+AGG | 0.335973 | 5_3:+69415691 | None:intergenic |
| AGAGGATGGAGAAGGGCTAT+TGG | 0.338124 | 5_3:-69414581 | Msa0827870:CDS |
| ACAACCAATGTTCTCATGTT+AGG | 0.341290 | 5_3:-69415979 | Msa0827870:CDS |
| TGTTCACATTGGATGGGGTT+TGG | 0.346069 | 5_3:-69414620 | Msa0827870:CDS |
| GTCCTCAGGAGGAGCTTCTA+TGG | 0.350489 | 5_3:+69414555 | None:intergenic |
| AATCACCCTATTCATCTTCA+TGG | 0.351556 | 5_3:-69415337 | Msa0827870:CDS |
| TCATATCCATGAAGATGAAT+AGG | 0.353366 | 5_3:+69415331 | None:intergenic |
| CCATTATTAATTTCCAAAGT+TGG | 0.356421 | 5_3:+69417992 | None:intergenic |
| GTTTGATGTATGTAGGTGTT+TGG | 0.364623 | 5_3:-69414663 | Msa0827870:intron |
| TTTGTTTCTCCTGAATCAAT+TGG | 0.365718 | 5_3:+69416108 | None:intergenic |
| CGCCGGGCGCGCTTACCAAT+CGG | 0.373787 | 5_3:-69415896 | Msa0827870:CDS |
| GGATAAGCATCTCCTTCCTT+AGG | 0.376333 | 5_3:+69417019 | None:intergenic |
| TAGTATCAATTTAACCAATA+GGG | 0.376992 | 5_3:+69414331 | None:intergenic |
| AATTAATAATGGAGATACTT+TGG | 0.377624 | 5_3:-69417981 | Msa0827870:CDS |
| GAGATTTGGATCAAGGGTTC+AGG | 0.378810 | 5_3:-69415395 | Msa0827870:CDS |
| ACAATTTCCTGGTCCAACTT+TGG | 0.400549 | 5_3:-69418005 | Msa0827870:CDS |
| ATAACTGCCCAACCATTAAC+AGG | 0.400604 | 5_3:+69415208 | None:intergenic |
| AGAATGGGTGTTTCACGCTT+TGG | 0.403573 | 5_3:+69416986 | None:intergenic |
| GGATTAGAACATCAGTGGTT+TGG | 0.403888 | 5_3:+69415950 | None:intergenic |
| CTAAGTTGAGATTTGGATCA+AGG | 0.404145 | 5_3:-69415402 | Msa0827870:CDS |
| TGCTGTACCTGTTAATGGTT+GGG | 0.408222 | 5_3:-69415215 | Msa0827870:CDS |
| TCCATTAATGGTAAATCTAT+AGG | 0.411836 | 5_3:+69417117 | None:intergenic |
| CAATGACCGACTCACATTAC+CGG | 0.413180 | 5_3:+69415453 | None:intergenic |
| AGCCGATTGGTAAGCGCGCC+CGG | 0.414132 | 5_3:+69415894 | None:intergenic |
| CCGGCGATGTAGTATCTTGA+TGG | 0.420568 | 5_3:+69415913 | None:intergenic |
| GTTACAATGTCACCATTCAT+TGG | 0.426411 | 5_3:-69417934 | Msa0827870:intron |
| ACTGTGAATGGACAATTTCC+TGG | 0.436760 | 5_3:-69418016 | Msa0827870:CDS |
| ATCCTGCAGGCTCATAAACT+TGG | 0.437751 | 5_3:-69415535 | Msa0827870:CDS |
| TTTGTAATTGATATGTTATG+AGG | 0.438070 | 5_3:-69414293 | Msa0827870:three_prime_UTR |
| TTTCATTTAGAGATAAAATT+GGG | 0.438549 | 5_3:-69414411 | Msa0827870:three_prime_UTR |
| CTTGGATGTTCACATTGGAT+GGG | 0.442663 | 5_3:-69414626 | Msa0827870:CDS |
| ATGATCATTACCTAGAAGAA+TGG | 0.443551 | 5_3:+69416970 | None:intergenic |
| GATAGTGTCACAAACCCTAT+TGG | 0.446797 | 5_3:-69414345 | Msa0827870:three_prime_UTR |
| TAACTTTCTCCAGGACGAAT+AGG | 0.449717 | 5_3:+69417142 | None:intergenic |
| ACTTGGATGTTCACATTGGA+TGG | 0.450150 | 5_3:-69414627 | Msa0827870:CDS |
| GCAGGTAATGAAGGCATGAT+TGG | 0.454006 | 5_3:+69415781 | None:intergenic |
| CATATCCATGAAGATGAATA+GGG | 0.455044 | 5_3:+69415332 | None:intergenic |
| GTGAGACAAGCCACACAAAC+AGG | 0.461238 | 5_3:-69416596 | Msa0827870:CDS |
| GTGTTGCACAGCCTCTTCAC+TGG | 0.461801 | 5_3:+69418052 | None:intergenic |
| TCATTGTGGCAACCGATTCA+AGG | 0.473488 | 5_3:-69415436 | Msa0827870:CDS |
| TCATCACCTTGTCCTGCAAA+GGG | 0.474167 | 5_3:-69415820 | Msa0827870:CDS |
| TAACACAAAGGCAGGTCCTC+AGG | 0.478994 | 5_3:+69414541 | None:intergenic |
| TTGCTGTACCTGTTAATGGT+TGG | 0.479566 | 5_3:-69415216 | Msa0827870:CDS |
| CAAATGAGCATCACTGTGAA+TGG | 0.479962 | 5_3:-69418028 | Msa0827870:CDS |
| TGATGATTTGTATTCAAGAA+TGG | 0.480556 | 5_3:+69415837 | None:intergenic |
| GTAACTTTAGTCCCTTGAAT+CGG | 0.482864 | 5_3:+69415424 | None:intergenic |
| AGATTTGTTGCTGACAATCC+AGG | 0.489827 | 5_3:-69415184 | Msa0827870:intron |
| TGATCATTACCTAGAAGAAT+GGG | 0.490111 | 5_3:+69416971 | None:intergenic |
| AAACTCGTGCTCATGAACTT+TGG | 0.490870 | 5_3:+69418193 | None:intergenic |
| ACCTTGTTGATCCACCTATG+AGG | 0.490977 | 5_3:-69415246 | Msa0827870:CDS |
| ACAGCAACAGTGTTCCTCAT+AGG | 0.495749 | 5_3:+69415232 | None:intergenic |
| TTGGATGTTCACATTGGATG+GGG | 0.496559 | 5_3:-69414625 | Msa0827870:CDS |
| TTGGATTATGCATTGTCACT+TGG | 0.496947 | 5_3:-69414644 | Msa0827870:CDS |
| AACCATAAACTAACAGTAGT+AGG | 0.497147 | 5_3:-69416030 | Msa0827870:CDS |
| GGGGTTAGACAAATCAGAAC+AGG | 0.499855 | 5_3:-69417199 | Msa0827870:CDS |
| TGATTTGCATTAAAATTCGA+TGG | 0.500850 | 5_3:+69415634 | None:intergenic |
| GATAAGCATCTCCTTCCTTA+GGG | 0.506054 | 5_3:+69417020 | None:intergenic |
| GCTTGTCTCACAACATCCAT+AGG | 0.506366 | 5_3:+69416608 | None:intergenic |
| ATGAGAACATTGGTTGTGAA+TGG | 0.509668 | 5_3:+69415985 | None:intergenic |
| TCACGCTTTGGCTTAGTGAA+AGG | 0.510131 | 5_3:+69416998 | None:intergenic |
| CTCCAAGTTTATGAGCCTGC+AGG | 0.510477 | 5_3:+69415533 | None:intergenic |
| AGAACATCAGTGGTTTGGCC+AGG | 0.514268 | 5_3:+69415955 | None:intergenic |
| ATCATCACCTTGTCCTGCAA+AGG | 0.514426 | 5_3:-69415821 | Msa0827870:CDS |
| GTGATATTATTACCAATGAA+TGG | 0.515384 | 5_3:+69417922 | None:intergenic |
| AGATGAATAGGGTGATTCTC+AGG | 0.517564 | 5_3:+69415343 | None:intergenic |
| ATCAGAACAGGATGGGCTGA+TGG | 0.518148 | 5_3:-69417187 | Msa0827870:CDS |
| TTGATGGTGGTTGGTCACCT+TGG | 0.518654 | 5_3:+69415929 | None:intergenic |
| GAAGTGAACCGTGTACCGTT+CGG | 0.519056 | 5_3:+69415601 | None:intergenic |
| TTTGCAATTGTGAAGAAAAG+AGG | 0.519484 | 5_3:+69416051 | None:intergenic |
| ACTCAATGTCCTATTCGTCC+TGG | 0.520865 | 5_3:-69417151 | Msa0827870:CDS |
| GATTATCCTAACACAAAGGC+AGG | 0.522293 | 5_3:+69414533 | None:intergenic |
| GCTCATAAACTTGGAGTACA+AGG | 0.524236 | 5_3:-69415526 | Msa0827870:CDS |
| CAGCATTGATTACTCTTAGG+AGG | 0.526575 | 5_3:+69416085 | None:intergenic |
| TTTACCATTAATGGACAAGA+AGG | 0.529526 | 5_3:-69417109 | Msa0827870:CDS |
| GTGTTTGTGTCATTGTAAGC+AGG | 0.530023 | 5_3:+69415763 | None:intergenic |
| ATGTGTGTGAATGAAGGTTA+AGG | 0.535530 | 5_3:+69418309 | None:intergenic |
| ATGGTGGGATGCAAACCCTA+TGG | 0.535899 | 5_3:-69416624 | Msa0827870:CDS |
| GTTAAGGTTACAAATTGCAA+TGG | 0.537808 | 5_3:+69418325 | None:intergenic |
| TCATTGTAAGCAGGTAATGA+AGG | 0.540128 | 5_3:+69415772 | None:intergenic |
| TGATTTCTATATTGTTGCTG+AGG | 0.540678 | 5_3:-69415311 | Msa0827870:CDS |
| CTTTACAAGTGCTCTACCAA+AGG | 0.542011 | 5_3:-69416521 | Msa0827870:intron |
| TTTAATGCAAATCAATGTCA+AGG | 0.544640 | 5_3:-69415625 | Msa0827870:CDS |
| ATCACCTTGTCCTGCAAAGG+GGG | 0.545026 | 5_3:-69415818 | Msa0827870:CDS |
| CTATAGGTGTAACTTTCTCC+AGG | 0.545148 | 5_3:+69417133 | None:intergenic |
| TAAGTTGAGATTTGGATCAA+GGG | 0.547755 | 5_3:-69415401 | Msa0827870:CDS |
| CCATCAAGATACTACATCGC+CGG | 0.549313 | 5_3:-69415913 | Msa0827870:CDS |
| GATTTCTATATTGTTGCTGA+GGG | 0.549381 | 5_3:-69415310 | Msa0827870:CDS |
| TGGAGCTGCTCCTGTTTGTG+TGG | 0.553190 | 5_3:+69416586 | None:intergenic |
| AAAACAATGTGTGTGAATGA+AGG | 0.555844 | 5_3:+69418303 | None:intergenic |
| CATTGTGGCAACCGATTCAA+GGG | 0.556129 | 5_3:-69415435 | Msa0827870:CDS |
| ACCGGTGTAATCAAATTGCA+CGG | 0.556156 | 5_3:+69415471 | None:intergenic |
| GTCAAGGACCGAACGGTACA+CGG | 0.560784 | 5_3:-69415609 | Msa0827870:CDS |
| AGCTCTAATCATTCACCCTA+AGG | 0.560869 | 5_3:-69417035 | Msa0827870:CDS |
| CATCAAGATACTACATCGCC+GGG | 0.561153 | 5_3:-69415912 | Msa0827870:CDS |
| ACCACTGATGTTCTAATCCA+AGG | 0.563616 | 5_3:-69415946 | Msa0827870:CDS |
| TTAATTTCCAAAGTTGGACC+AGG | 0.564251 | 5_3:+69417998 | None:intergenic |
| GACAAGAAGGTACACTTTGG+TGG | 0.574088 | 5_3:-69417096 | Msa0827870:CDS |
| TTGTTTAATACTCTAAACAA+TGG | 0.576331 | 5_3:-69418273 | Msa0827870:exon |
| TTGTTTGTTTCCCTGCATTG+GGG | 0.580260 | 5_3:-69414468 | Msa0827870:three_prime_UTR |
| CTTGTCTCACAACATCCATA+GGG | 0.581965 | 5_3:+69416609 | None:intergenic |
| TACACTATTAATGGTCAACC+TGG | 0.583665 | 5_3:-69416548 | Msa0827870:CDS |
| CTAATCATTCACCCTAAGGA+AGG | 0.586825 | 5_3:-69417031 | Msa0827870:CDS |
| TGTAGTATCTTGATGGTGGT+TGG | 0.588008 | 5_3:+69415920 | None:intergenic |
| GGTTGTGAATGGTTTGACAT+AGG | 0.595120 | 5_3:+69415996 | None:intergenic |
| ACCTTGGATTAGAACATCAG+TGG | 0.604071 | 5_3:+69415945 | None:intergenic |
| ATGGACAAGAAGGTACACTT+TGG | 0.605647 | 5_3:-69417099 | Msa0827870:CDS |
| TTTGTATTCAAGAATGGCAG+TGG | 0.605780 | 5_3:+69415843 | None:intergenic |
| ATTGTTGAGTCCTAATCCAA+TGG | 0.608848 | 5_3:+69415660 | None:intergenic |
| TAGACAAATCAGAACAGGAT+GGG | 0.611575 | 5_3:-69417194 | Msa0827870:CDS |
| TACAAGCAACTCCAGTGAAG+AGG | 0.611814 | 5_3:-69418063 | Msa0827870:CDS |
| GAGCACTTGTAAAGATCACC+AGG | 0.619435 | 5_3:+69416530 | None:intergenic |
| GCAACAGTGTTCCTCATAGG+TGG | 0.621280 | 5_3:+69415235 | None:intergenic |
| TGTCACTTGGATGTTCACAT+TGG | 0.623581 | 5_3:-69414631 | Msa0827870:CDS |
| GTGTAATCAAATTGCACGGG+AGG | 0.625603 | 5_3:+69415475 | None:intergenic |
| CCGGTGTAATCAAATTGCAC+GGG | 0.626025 | 5_3:+69415472 | None:intergenic |
| ATTACACCGGTAATGTGAGT+CGG | 0.633330 | 5_3:-69415459 | Msa0827870:CDS |
| GTCCATAGAAGCTCCTCCTG+AGG | 0.638740 | 5_3:-69414557 | Msa0827870:CDS |
| AATGTTCTCATGTTAGGACC+TGG | 0.640008 | 5_3:-69415973 | Msa0827870:CDS |
| CACAAAGGCAGGTCCTCAGG+AGG | 0.658358 | 5_3:+69414544 | None:intergenic |
| GGGTTTGTGACACTATCAGA+TGG | 0.658383 | 5_3:+69414351 | None:intergenic |
| TCACCTTGTCCTGCAAAGGG+GGG | 0.659071 | 5_3:-69415817 | Msa0827870:CDS |
| TTTGGATTATCCTAACACAA+AGG | 0.661322 | 5_3:+69414529 | None:intergenic |
| GTAATGTGAGTCGGTCATTG+TGG | 0.663037 | 5_3:-69415450 | Msa0827870:CDS |
| TCCTCATAGGTGGATCAACA+AGG | 0.663984 | 5_3:+69415245 | None:intergenic |
| AATCAATGTCAAGGACCGAA+CGG | 0.668939 | 5_3:-69415616 | Msa0827870:CDS |
| CCCGTGCAATTTGATTACAC+CGG | 0.670640 | 5_3:-69415472 | Msa0827870:CDS |
| CATCACCTTGTCCTGCAAAG+GGG | 0.673225 | 5_3:-69415819 | Msa0827870:CDS |
| TTAGACAAATCAGAACAGGA+TGG | 0.677485 | 5_3:-69417195 | Msa0827870:CDS |
| AGGTCCTAACATGAGAACAT+TGG | 0.679248 | 5_3:+69415975 | None:intergenic |
| GATTAGAGCTCCATAAACTG+TGG | 0.691733 | 5_3:+69417048 | None:intergenic |
| GCGATGTAGTATCTTGATGG+TGG | 0.696908 | 5_3:+69415916 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTTTTAAAAAAAAAT+AGG | + | chr5_3:69414727-69414746 | None:intergenic | 0.0% |
| !!! | ATATTTTTTTAAAAAAAAAT+AGG | + | chr5_3:69414727-69414746 | None:intergenic | 0.0% |
| !! | TTAACAACTAAAAATAAAAA+GGG | + | chr5_3:69414418-69414437 | None:intergenic | 10.0% |
| !! | ATTAACAACTAAAAATAAAA+AGG | + | chr5_3:69414419-69414438 | None:intergenic | 10.0% |
| !! | ACTATAAAAATACTATTATA+TGG | + | chr5_3:69415160-69415179 | None:intergenic | 10.0% |
| !!! | TATAATAGTATTTTTATAGT+AGG | - | chr5_3:69415160-69415179 | Msa0827870:intron | 10.0% |
| !!! | ATAATAGTATTTTTATAGTA+GGG | - | chr5_3:69415161-69415180 | Msa0827870:intron | 10.0% |
| !!! | TTTTTTCAATTTGTTAATTA+AGG | - | chr5_3:69415772-69415791 | Msa0827870:CDS | 10.0% |
| !!! | ATGATGATTATTTTTTAATT+AGG | - | chr5_3:69415907-69415926 | Msa0827870:CDS | 10.0% |
| !!! | TGATGATTATTTTTTAATTA+GGG | - | chr5_3:69415908-69415927 | Msa0827870:CDS | 10.0% |
| !! | CAATTAATTTATTATGTATA+TGG | + | chr5_3:69416265-69416284 | None:intergenic | 10.0% |
| !!! | ATTTTGAATAAAATTTATGT+AGG | + | chr5_3:69417503-69417522 | None:intergenic | 10.0% |
| !!! | GAAAAAATTGTAAATTTTAT+AGG | - | chr5_3:69417636-69417655 | Msa0827870:intron | 10.0% |
| !! | AACTTTATCATAAAAATTAA+GGG | + | chr5_3:69417679-69417698 | None:intergenic | 10.0% |
| !! | AAACTTTATCATAAAAATTA+AGG | + | chr5_3:69417680-69417699 | None:intergenic | 10.0% |
| !!! | AATTACAAATTTTCATAATT+TGG | + | chr5_3:69418049-69418068 | None:intergenic | 10.0% |
| !! | TTAACAACTAAAAATAAAAA+GGG | + | chr5_3:69414418-69414437 | None:intergenic | 10.0% |
| !! | ATTAACAACTAAAAATAAAA+AGG | + | chr5_3:69414419-69414438 | None:intergenic | 10.0% |
| !! | ACTATAAAAATACTATTATA+TGG | + | chr5_3:69415160-69415179 | None:intergenic | 10.0% |
| !!! | TATAATAGTATTTTTATAGT+AGG | - | chr5_3:69415160-69415179 | Msa0827870:intron | 10.0% |
| !!! | ATAATAGTATTTTTATAGTA+GGG | - | chr5_3:69415161-69415180 | Msa0827870:intron | 10.0% |
| !!! | TTTTTTCAATTTGTTAATTA+AGG | - | chr5_3:69415772-69415791 | Msa0827870:CDS | 10.0% |
| !!! | ATGATGATTATTTTTTAATT+AGG | - | chr5_3:69415907-69415926 | Msa0827870:CDS | 10.0% |
| !!! | TGATGATTATTTTTTAATTA+GGG | - | chr5_3:69415908-69415927 | Msa0827870:CDS | 10.0% |
| !! | CAATTAATTTATTATGTATA+TGG | + | chr5_3:69416265-69416284 | None:intergenic | 10.0% |
| !!! | ATTTTGAATAAAATTTATGT+AGG | + | chr5_3:69417503-69417522 | None:intergenic | 10.0% |
| !!! | GAAAAAATTGTAAATTTTAT+AGG | - | chr5_3:69417636-69417655 | Msa0827870:intron | 10.0% |
| !! | AACTTTATCATAAAAATTAA+GGG | + | chr5_3:69417679-69417698 | None:intergenic | 10.0% |
| !! | AAACTTTATCATAAAAATTA+AGG | + | chr5_3:69417680-69417699 | None:intergenic | 10.0% |
| !!! | AATTACAAATTTTCATAATT+TGG | + | chr5_3:69418049-69418068 | None:intergenic | 10.0% |
| !! | GGAGATTAATTATAATTAAT+TGG | - | chr5_3:69414449-69414468 | Msa0827870:three_prime_UTR | 15.0% |
| !! | TTATATTCCTATTAGTATAT+AGG | - | chr5_3:69414832-69414851 | Msa0827870:intron | 15.0% |
| !! | AGTGTAATAACAAATTTAAT+TGG | - | chr5_3:69414906-69414925 | Msa0827870:intron | 15.0% |
| !! | TCAAAAATCAAAAACAAAAA+AGG | + | chr5_3:69415109-69415128 | None:intergenic | 15.0% |
| !! | TAAAAATACTATTATATGGA+AGG | + | chr5_3:69415156-69415175 | None:intergenic | 15.0% |
| !!! | ACCACAATTTAAAATTTTAA+TGG | - | chr5_3:69415236-69415255 | Msa0827870:CDS | 15.0% |
| !!! | ACCATTAAAATTTTAAATTG+TGG | + | chr5_3:69415240-69415259 | None:intergenic | 15.0% |
| !! | TGCAAATAATCAATAATTTA+TGG | - | chr5_3:69415302-69415321 | Msa0827870:CDS | 15.0% |
| !! | AGATAAGAATTAAAATAAGT+TGG | + | chr5_3:69415730-69415749 | None:intergenic | 15.0% |
| !!! | GATGATTATTTTTTAATTAG+GGG | - | chr5_3:69415909-69415928 | Msa0827870:CDS | 15.0% |
| !!! | TAAGCAAAAATCAATATTTT+AGG | + | chr5_3:69416294-69416313 | None:intergenic | 15.0% |
| !!! | TTTTCATTTAGAGATAAAAT+TGG | - | chr5_3:69418145-69418164 | Msa0827870:intron | 15.0% |
| !! | TTTCATTTAGAGATAAAATT+GGG | - | chr5_3:69418146-69418165 | Msa0827870:intron | 15.0% |
| !! | GGAGATTAATTATAATTAAT+TGG | - | chr5_3:69414449-69414468 | Msa0827870:three_prime_UTR | 15.0% |
| !! | TTATATTCCTATTAGTATAT+AGG | - | chr5_3:69414832-69414851 | Msa0827870:intron | 15.0% |
| !! | AGTGTAATAACAAATTTAAT+TGG | - | chr5_3:69414906-69414925 | Msa0827870:intron | 15.0% |
| !! | TCAAAAATCAAAAACAAAAA+AGG | + | chr5_3:69415109-69415128 | None:intergenic | 15.0% |
| !! | TAAAAATACTATTATATGGA+AGG | + | chr5_3:69415156-69415175 | None:intergenic | 15.0% |
| !!! | ACCACAATTTAAAATTTTAA+TGG | - | chr5_3:69415236-69415255 | Msa0827870:CDS | 15.0% |
| !!! | ACCATTAAAATTTTAAATTG+TGG | + | chr5_3:69415240-69415259 | None:intergenic | 15.0% |
| !! | TGCAAATAATCAATAATTTA+TGG | - | chr5_3:69415302-69415321 | Msa0827870:CDS | 15.0% |
| !! | AGATAAGAATTAAAATAAGT+TGG | + | chr5_3:69415730-69415749 | None:intergenic | 15.0% |
| !!! | GATGATTATTTTTTAATTAG+GGG | - | chr5_3:69415909-69415928 | Msa0827870:CDS | 15.0% |
| !!! | TAAGCAAAAATCAATATTTT+AGG | + | chr5_3:69416294-69416313 | None:intergenic | 15.0% |
| !!! | TTTTCATTTAGAGATAAAAT+TGG | - | chr5_3:69418145-69418164 | Msa0827870:intron | 15.0% |
| !! | TTTCATTTAGAGATAAAATT+GGG | - | chr5_3:69418146-69418165 | Msa0827870:intron | 15.0% |
| !! | TTGTTTAATACTCTAAACAA+TGG | - | chr5_3:69414284-69414303 | Msa0827870:three_prime_UTR | 20.0% |
| !! | TTAGTTGTTAATTTAACCTT+TGG | - | chr5_3:69414427-69414446 | Msa0827870:three_prime_UTR | 20.0% |
| !! | TAGTTGTTAATTTAACCTTT+GGG | - | chr5_3:69414428-69414447 | Msa0827870:three_prime_UTR | 20.0% |
| !! | AATTATAATTAATCTCCCAA+AGG | + | chr5_3:69414446-69414465 | None:intergenic | 20.0% |
| !!! | AATTAATAATGGAGATACTT+TGG | - | chr5_3:69414576-69414595 | Msa0827870:CDS | 20.0% |
| !!! | TACTTTTCCTATATACTAAT+AGG | + | chr5_3:69414842-69414861 | None:intergenic | 20.0% |
| !! | AAAACTAAAAAGTAACTAGA+TGG | + | chr5_3:69415055-69415074 | None:intergenic | 20.0% |
| !! | ATGCATGCTATAATTTATAA+AGG | - | chr5_3:69415269-69415288 | Msa0827870:CDS | 20.0% |
| !!! | TTATTGCATTTTGAATCTTT+AGG | - | chr5_3:69415332-69415351 | Msa0827870:CDS | 20.0% |
| !!! | ATTTTTATATCTGATGTAAC+TGG | - | chr5_3:69415661-69415680 | Msa0827870:CDS | 20.0% |
| !! | AATCTTTGTCTAAAAAGAAA+AGG | + | chr5_3:69415849-69415868 | None:intergenic | 20.0% |
| !!! | TTATTTTTTAATTAGGGGAA+TGG | - | chr5_3:69415914-69415933 | Msa0827870:CDS | 20.0% |
| !! | ACATAAAATAATCAAACCTT+TGG | + | chr5_3:69416055-69416074 | None:intergenic | 20.0% |
| !!! | TATATGGTCTTTTTAAATGT+CGG | + | chr5_3:69416249-69416268 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATAATAGTGAT+CGG | - | chr5_3:69416304-69416323 | Msa0827870:intron | 20.0% |
| !! | AATGATCATATGTCAAATAA+TGG | + | chr5_3:69416405-69416424 | None:intergenic | 20.0% |
| !! | ATTATTTGACATATGATCAT+TGG | - | chr5_3:69416404-69416423 | Msa0827870:intron | 20.0% |
| !!! | ATTAGGGTTAATTATGTTTT+CGG | - | chr5_3:69417439-69417458 | Msa0827870:intron | 20.0% |
| !! | TTGAATAAAATTTATGTAGG+AGG | + | chr5_3:69417500-69417519 | None:intergenic | 20.0% |
| !! | GTCTCAATAAAATCAAAATA+AGG | - | chr5_3:69417578-69417597 | Msa0827870:intron | 20.0% |
| !! | ATGTTTGATCTTATGTAATT+TGG | - | chr5_3:69417869-69417888 | Msa0827870:intron | 20.0% |
| !! | TAGTATCAATTTAACCAATA+GGG | + | chr5_3:69418229-69418248 | None:intergenic | 20.0% |
| !! | TTTGTAATTGATATGTTATG+AGG | - | chr5_3:69418264-69418283 | Msa0827870:exon | 20.0% |
| !! | TTGTTTAATACTCTAAACAA+TGG | - | chr5_3:69414284-69414303 | Msa0827870:three_prime_UTR | 20.0% |
| !! | TTAGTTGTTAATTTAACCTT+TGG | - | chr5_3:69414427-69414446 | Msa0827870:three_prime_UTR | 20.0% |
| !! | TAGTTGTTAATTTAACCTTT+GGG | - | chr5_3:69414428-69414447 | Msa0827870:three_prime_UTR | 20.0% |
| !! | AATTATAATTAATCTCCCAA+AGG | + | chr5_3:69414446-69414465 | None:intergenic | 20.0% |
| !!! | AATTAATAATGGAGATACTT+TGG | - | chr5_3:69414576-69414595 | Msa0827870:CDS | 20.0% |
| !!! | TACTTTTCCTATATACTAAT+AGG | + | chr5_3:69414842-69414861 | None:intergenic | 20.0% |
| !! | AAAACTAAAAAGTAACTAGA+TGG | + | chr5_3:69415055-69415074 | None:intergenic | 20.0% |
| !! | ATGCATGCTATAATTTATAA+AGG | - | chr5_3:69415269-69415288 | Msa0827870:CDS | 20.0% |
| !!! | TTATTGCATTTTGAATCTTT+AGG | - | chr5_3:69415332-69415351 | Msa0827870:CDS | 20.0% |
| !!! | ATTTTTATATCTGATGTAAC+TGG | - | chr5_3:69415661-69415680 | Msa0827870:CDS | 20.0% |
| !! | AATCTTTGTCTAAAAAGAAA+AGG | + | chr5_3:69415849-69415868 | None:intergenic | 20.0% |
| !!! | TTATTTTTTAATTAGGGGAA+TGG | - | chr5_3:69415914-69415933 | Msa0827870:CDS | 20.0% |
| !! | ACATAAAATAATCAAACCTT+TGG | + | chr5_3:69416055-69416074 | None:intergenic | 20.0% |
| !!! | TATATGGTCTTTTTAAATGT+CGG | + | chr5_3:69416249-69416268 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATAATAGTGAT+CGG | - | chr5_3:69416304-69416323 | Msa0827870:intron | 20.0% |
| !! | AATGATCATATGTCAAATAA+TGG | + | chr5_3:69416405-69416424 | None:intergenic | 20.0% |
| !! | ATTATTTGACATATGATCAT+TGG | - | chr5_3:69416404-69416423 | Msa0827870:intron | 20.0% |
| !!! | ATTAGGGTTAATTATGTTTT+CGG | - | chr5_3:69417439-69417458 | Msa0827870:intron | 20.0% |
| !! | TTGAATAAAATTTATGTAGG+AGG | + | chr5_3:69417500-69417519 | None:intergenic | 20.0% |
| !! | GTCTCAATAAAATCAAAATA+AGG | - | chr5_3:69417578-69417597 | Msa0827870:intron | 20.0% |
| !! | ATGTTTGATCTTATGTAATT+TGG | - | chr5_3:69417869-69417888 | Msa0827870:intron | 20.0% |
| !! | TAGTATCAATTTAACCAATA+GGG | + | chr5_3:69418229-69418248 | None:intergenic | 20.0% |
| !! | TTTGTAATTGATATGTTATG+AGG | - | chr5_3:69418264-69418283 | Msa0827870:exon | 20.0% |
| ! | AAGAAAAATTGCTAAGAAGA+TGG | + | chr5_3:69414322-69414341 | None:intergenic | 25.0% |
| ! | GCATGTTTATTAATGTGAAA+AGG | - | chr5_3:69414471-69414490 | Msa0827870:three_prime_UTR | 25.0% |
| ! | CCATTATTAATTTCCAAAGT+TGG | + | chr5_3:69414568-69414587 | None:intergenic | 25.0% |
| !! | CCAACTTTGGAAATTAATAA+TGG | - | chr5_3:69414565-69414584 | Msa0827870:CDS | 25.0% |
| ! | GTGATATTATTACCAATGAA+TGG | + | chr5_3:69414638-69414657 | None:intergenic | 25.0% |
| ! | GGAAAAGTAAATGATAGATA+CGG | - | chr5_3:69414853-69414872 | Msa0827870:intron | 25.0% |
| ! | ATAAATAGCAATGCTCAAAA+AGG | - | chr5_3:69414971-69414990 | Msa0827870:intron | 25.0% |
| ! | TAAATAGCAATGCTCAAAAA+GGG | - | chr5_3:69414972-69414991 | Msa0827870:intron | 25.0% |
| ! | AAGGTGTAAGAAAACAAAAA+AGG | + | chr5_3:69415137-69415156 | None:intergenic | 25.0% |
| ! | ACCTATAGATTTACCATTAA+TGG | - | chr5_3:69415439-69415458 | Msa0827870:CDS | 25.0% |
| ! | TCCATTAATGGTAAATCTAT+AGG | + | chr5_3:69415443-69415462 | None:intergenic | 25.0% |
| ! | AGAATTCAATAAGTGATTGA+AGG | + | chr5_3:69416351-69416370 | None:intergenic | 25.0% |
| ! | AATGGAAAAATGTTTAGTCA+TGG | + | chr5_3:69416387-69416406 | None:intergenic | 25.0% |
| !! | TGATGATTTGTATTCAAGAA+TGG | + | chr5_3:69416723-69416742 | None:intergenic | 25.0% |
| !!! | GTAAAAGCTTTAGAAGTTTA+AGG | - | chr5_3:69416831-69416850 | Msa0827870:intron | 25.0% |
| ! | AGATCTTCATCAATTTCATT+AGG | + | chr5_3:69416869-69416888 | None:intergenic | 25.0% |
| !! | TGATTTGCATTAAAATTCGA+TGG | + | chr5_3:69416926-69416945 | None:intergenic | 25.0% |
| ! | TTTAATGCAAATCAATGTCA+AGG | - | chr5_3:69416932-69416951 | Msa0827870:intron | 25.0% |
| !! | AAAGTTACTAAGTTGAGATT+TGG | - | chr5_3:69417148-69417167 | Msa0827870:CDS | 25.0% |
| !!! | ATTTTGAAGCATCTTTCTTA+GGG | + | chr5_3:69417288-69417307 | None:intergenic | 25.0% |
| !!! | AATTTTGAAGCATCTTTCTT+AGG | + | chr5_3:69417289-69417308 | None:intergenic | 25.0% |
| ! | AAAGTTTCACAAACATGATA+TGG | - | chr5_3:69417693-69417712 | Msa0827870:intron | 25.0% |
| ! | AGAAAAATGAAACAGAACAA+TGG | + | chr5_3:69418126-69418145 | None:intergenic | 25.0% |
| ! | CTAGTATCAATTTAACCAAT+AGG | + | chr5_3:69418230-69418249 | None:intergenic | 25.0% |
| ! | AAAACATATACGCTCATATT+TGG | + | chr5_3:69418326-69418345 | None:intergenic | 25.0% |
| ! | AAGAAAAATTGCTAAGAAGA+TGG | + | chr5_3:69414322-69414341 | None:intergenic | 25.0% |
| ! | GCATGTTTATTAATGTGAAA+AGG | - | chr5_3:69414471-69414490 | Msa0827870:three_prime_UTR | 25.0% |
| ! | CCATTATTAATTTCCAAAGT+TGG | + | chr5_3:69414568-69414587 | None:intergenic | 25.0% |
| !! | CCAACTTTGGAAATTAATAA+TGG | - | chr5_3:69414565-69414584 | Msa0827870:CDS | 25.0% |
| ! | GTGATATTATTACCAATGAA+TGG | + | chr5_3:69414638-69414657 | None:intergenic | 25.0% |
| ! | GGAAAAGTAAATGATAGATA+CGG | - | chr5_3:69414853-69414872 | Msa0827870:intron | 25.0% |
| ! | ATAAATAGCAATGCTCAAAA+AGG | - | chr5_3:69414971-69414990 | Msa0827870:intron | 25.0% |
| ! | TAAATAGCAATGCTCAAAAA+GGG | - | chr5_3:69414972-69414991 | Msa0827870:intron | 25.0% |
| ! | AAGGTGTAAGAAAACAAAAA+AGG | + | chr5_3:69415137-69415156 | None:intergenic | 25.0% |
| ! | ACCTATAGATTTACCATTAA+TGG | - | chr5_3:69415439-69415458 | Msa0827870:CDS | 25.0% |
| ! | TCCATTAATGGTAAATCTAT+AGG | + | chr5_3:69415443-69415462 | None:intergenic | 25.0% |
| ! | AGAATTCAATAAGTGATTGA+AGG | + | chr5_3:69416351-69416370 | None:intergenic | 25.0% |
| ! | AATGGAAAAATGTTTAGTCA+TGG | + | chr5_3:69416387-69416406 | None:intergenic | 25.0% |
| !! | TGATGATTTGTATTCAAGAA+TGG | + | chr5_3:69416723-69416742 | None:intergenic | 25.0% |
| !!! | GTAAAAGCTTTAGAAGTTTA+AGG | - | chr5_3:69416831-69416850 | Msa0827870:intron | 25.0% |
| ! | AGATCTTCATCAATTTCATT+AGG | + | chr5_3:69416869-69416888 | None:intergenic | 25.0% |
| !! | TGATTTGCATTAAAATTCGA+TGG | + | chr5_3:69416926-69416945 | None:intergenic | 25.0% |
| ! | TTTAATGCAAATCAATGTCA+AGG | - | chr5_3:69416932-69416951 | Msa0827870:intron | 25.0% |
| !! | AAAGTTACTAAGTTGAGATT+TGG | - | chr5_3:69417148-69417167 | Msa0827870:CDS | 25.0% |
| !!! | ATTTTGAAGCATCTTTCTTA+GGG | + | chr5_3:69417288-69417307 | None:intergenic | 25.0% |
| !!! | AATTTTGAAGCATCTTTCTT+AGG | + | chr5_3:69417289-69417308 | None:intergenic | 25.0% |
| ! | AAAGTTTCACAAACATGATA+TGG | - | chr5_3:69417693-69417712 | Msa0827870:intron | 25.0% |
| ! | AGAAAAATGAAACAGAACAA+TGG | + | chr5_3:69418126-69418145 | None:intergenic | 25.0% |
| ! | CTAGTATCAATTTAACCAAT+AGG | + | chr5_3:69418230-69418249 | None:intergenic | 25.0% |
| ! | AAAACATATACGCTCATATT+TGG | + | chr5_3:69418326-69418345 | None:intergenic | 25.0% |
| AAAACAATGTGTGTGAATGA+AGG | + | chr5_3:69414257-69414276 | None:intergenic | 30.0% | |
| ! | CTTAGCAATTTTTCTTCTCT+TGG | - | chr5_3:69414326-69414345 | Msa0827870:three_prime_UTR | 30.0% |
| TAAATGAGTTAAGACAAGTC+AGG | - | chr5_3:69415022-69415041 | Msa0827870:intron | 30.0% | |
| AAATGAGTTAAGACAAGTCA+GGG | - | chr5_3:69415023-69415042 | Msa0827870:intron | 30.0% | |
| ! | CATTTTGAATCTTTAGGCAT+GGG | - | chr5_3:69415338-69415357 | Msa0827870:CDS | 30.0% |
| ! | ATTTTGAATCTTTAGGCATG+GGG | - | chr5_3:69415339-69415358 | Msa0827870:CDS | 30.0% |
| ! | TTTACCATTAATGGACAAGA+AGG | - | chr5_3:69415448-69415467 | Msa0827870:CDS | 30.0% |
| TGATCATTACCTAGAAGAAT+GGG | + | chr5_3:69415589-69415608 | None:intergenic | 30.0% | |
| ATGATCATTACCTAGAAGAA+TGG | + | chr5_3:69415590-69415609 | None:intergenic | 30.0% | |
| GACAAAGATTATGTTCATGA+TGG | - | chr5_3:69415859-69415878 | Msa0827870:CDS | 30.0% | |
| !!! | TTTTTTAATTAGGGGAATGG+TGG | - | chr5_3:69415917-69415936 | Msa0827870:CDS | 30.0% |
| !! | TTTTTAATTAGGGGAATGGT+GGG | - | chr5_3:69415918-69415937 | Msa0827870:CDS | 30.0% |
| GTGTATGCATCAGATATATT+TGG | + | chr5_3:69415994-69416013 | None:intergenic | 30.0% | |
| TCTGATGCATACACTATTAA+TGG | - | chr5_3:69416000-69416019 | Msa0827870:CDS | 30.0% | |
| ! | ACAATTGTTCCAATTGATTC+AGG | - | chr5_3:69416440-69416459 | Msa0827870:intron | 30.0% |
| ! | TTTGTTTCTCCTGAATCAAT+TGG | + | chr5_3:69416452-69416471 | None:intergenic | 30.0% |
| TTTGCAATTGTGAAGAAAAG+AGG | + | chr5_3:69416509-69416528 | None:intergenic | 30.0% | |
| AACCATAAACTAACAGTAGT+AGG | - | chr5_3:69416527-69416546 | Msa0827870:CDS | 30.0% | |
| ! | GAAGATCTTTTCTTTACCAT+TGG | - | chr5_3:69416881-69416900 | Msa0827870:intron | 30.0% |
| ! | CTTTTCTTTACCATTGGATT+AGG | - | chr5_3:69416887-69416906 | Msa0827870:intron | 30.0% |
| ! | TAAGTTGAGATTTGGATCAA+GGG | - | chr5_3:69417156-69417175 | Msa0827870:CDS | 30.0% |
| CATATCCATGAAGATGAATA+GGG | + | chr5_3:69417228-69417247 | None:intergenic | 30.0% | |
| TCATATCCATGAAGATGAAT+AGG | + | chr5_3:69417229-69417248 | None:intergenic | 30.0% | |
| TGATTTCTATATTGTTGCTG+AGG | - | chr5_3:69417246-69417265 | Msa0827870:intron | 30.0% | |
| GATTTCTATATTGTTGCTGA+GGG | - | chr5_3:69417247-69417266 | Msa0827870:intron | 30.0% | |
| ATCAAAATAAGGACTGAAAG+TGG | - | chr5_3:69417589-69417608 | Msa0827870:intron | 30.0% | |
| TTTGGTTGTTTGATGTATGT+AGG | - | chr5_3:69417887-69417906 | Msa0827870:intron | 30.0% | |
| TTTGGATTATCCTAACACAA+AGG | + | chr5_3:69418031-69418050 | None:intergenic | 30.0% | |
| AAAACAATGTGTGTGAATGA+AGG | + | chr5_3:69414257-69414276 | None:intergenic | 30.0% | |
| ! | CTTAGCAATTTTTCTTCTCT+TGG | - | chr5_3:69414326-69414345 | Msa0827870:three_prime_UTR | 30.0% |
| TAAATGAGTTAAGACAAGTC+AGG | - | chr5_3:69415022-69415041 | Msa0827870:intron | 30.0% | |
| AAATGAGTTAAGACAAGTCA+GGG | - | chr5_3:69415023-69415042 | Msa0827870:intron | 30.0% | |
| ! | CATTTTGAATCTTTAGGCAT+GGG | - | chr5_3:69415338-69415357 | Msa0827870:CDS | 30.0% |
| ! | ATTTTGAATCTTTAGGCATG+GGG | - | chr5_3:69415339-69415358 | Msa0827870:CDS | 30.0% |
| ! | TTTACCATTAATGGACAAGA+AGG | - | chr5_3:69415448-69415467 | Msa0827870:CDS | 30.0% |
| TGATCATTACCTAGAAGAAT+GGG | + | chr5_3:69415589-69415608 | None:intergenic | 30.0% | |
| ATGATCATTACCTAGAAGAA+TGG | + | chr5_3:69415590-69415609 | None:intergenic | 30.0% | |
| GACAAAGATTATGTTCATGA+TGG | - | chr5_3:69415859-69415878 | Msa0827870:CDS | 30.0% | |
| !!! | TTTTTTAATTAGGGGAATGG+TGG | - | chr5_3:69415917-69415936 | Msa0827870:CDS | 30.0% |
| !! | TTTTTAATTAGGGGAATGGT+GGG | - | chr5_3:69415918-69415937 | Msa0827870:CDS | 30.0% |
| GTGTATGCATCAGATATATT+TGG | + | chr5_3:69415994-69416013 | None:intergenic | 30.0% | |
| TCTGATGCATACACTATTAA+TGG | - | chr5_3:69416000-69416019 | Msa0827870:CDS | 30.0% | |
| ! | ACAATTGTTCCAATTGATTC+AGG | - | chr5_3:69416440-69416459 | Msa0827870:intron | 30.0% |
| ! | TTTGTTTCTCCTGAATCAAT+TGG | + | chr5_3:69416452-69416471 | None:intergenic | 30.0% |
| TTTGCAATTGTGAAGAAAAG+AGG | + | chr5_3:69416509-69416528 | None:intergenic | 30.0% | |
| AACCATAAACTAACAGTAGT+AGG | - | chr5_3:69416527-69416546 | Msa0827870:CDS | 30.0% | |
| ! | GAAGATCTTTTCTTTACCAT+TGG | - | chr5_3:69416881-69416900 | Msa0827870:intron | 30.0% |
| ! | CTTTTCTTTACCATTGGATT+AGG | - | chr5_3:69416887-69416906 | Msa0827870:intron | 30.0% |
| ! | TAAGTTGAGATTTGGATCAA+GGG | - | chr5_3:69417156-69417175 | Msa0827870:CDS | 30.0% |
| CATATCCATGAAGATGAATA+GGG | + | chr5_3:69417228-69417247 | None:intergenic | 30.0% | |
| TCATATCCATGAAGATGAAT+AGG | + | chr5_3:69417229-69417248 | None:intergenic | 30.0% | |
| TGATTTCTATATTGTTGCTG+AGG | - | chr5_3:69417246-69417265 | Msa0827870:intron | 30.0% | |
| GATTTCTATATTGTTGCTGA+GGG | - | chr5_3:69417247-69417266 | Msa0827870:intron | 30.0% | |
| ATCAAAATAAGGACTGAAAG+TGG | - | chr5_3:69417589-69417608 | Msa0827870:intron | 30.0% | |
| TTTGGTTGTTTGATGTATGT+AGG | - | chr5_3:69417887-69417906 | Msa0827870:intron | 30.0% | |
| TTTGGATTATCCTAACACAA+AGG | + | chr5_3:69418031-69418050 | None:intergenic | 30.0% | |
| ATGTGTGTGAATGAAGGTTA+AGG | + | chr5_3:69414251-69414270 | None:intergenic | 35.0% | |
| TTAATTTCCAAAGTTGGACC+AGG | + | chr5_3:69414562-69414581 | None:intergenic | 35.0% | |
| GTTACAATGTCACCATTCAT+TGG | - | chr5_3:69414623-69414642 | Msa0827870:CDS | 35.0% | |
| !! | AAAAGTGTTTGCTTGCTTGT+GGG | + | chr5_3:69414762-69414781 | None:intergenic | 35.0% |
| !! | AAAAAGTGTTTGCTTGCTTG+TGG | + | chr5_3:69414763-69414782 | None:intergenic | 35.0% |
| TCTTAGTACAAGTGTGAAGA+AGG | + | chr5_3:69414790-69414809 | None:intergenic | 35.0% | |
| AAAAGGAATGTCACTCTACA+TGG | + | chr5_3:69415092-69415111 | None:intergenic | 35.0% | |
| ! | GCATTTTGAATCTTTAGGCA+TGG | - | chr5_3:69415337-69415356 | Msa0827870:CDS | 35.0% |
| TTAGACAAATCAGAACAGGA+TGG | - | chr5_3:69415362-69415381 | Msa0827870:CDS | 35.0% | |
| TAGACAAATCAGAACAGGAT+GGG | - | chr5_3:69415363-69415382 | Msa0827870:CDS | 35.0% | |
| TGTACCTTCTTGTCCATTAA+TGG | + | chr5_3:69415455-69415474 | None:intergenic | 35.0% | |
| ! | GATTATGTTCATGATGGAGA+TGG | - | chr5_3:69415865-69415884 | Msa0827870:CDS | 35.0% |
| ! | TCATGATGGAGATGGTTTAA+CGG | - | chr5_3:69415873-69415892 | Msa0827870:CDS | 35.0% |
| TACACTATTAATGGTCAACC+TGG | - | chr5_3:69416009-69416028 | Msa0827870:CDS | 35.0% | |
| TTGCTTATAATAGTGATCGG+AGG | - | chr5_3:69416307-69416326 | Msa0827870:intron | 35.0% | |
| ! | CACCTACTACTGTTAGTTTA+TGG | + | chr5_3:69416532-69416551 | None:intergenic | 35.0% |
| ! | ATGAGAACATTGGTTGTGAA+TGG | + | chr5_3:69416575-69416594 | None:intergenic | 35.0% |
| ACAACCAATGTTCTCATGTT+AGG | - | chr5_3:69416578-69416597 | Msa0827870:CDS | 35.0% | |
| TTTGTATTCAAGAATGGCAG+TGG | + | chr5_3:69416717-69416736 | None:intergenic | 35.0% | |
| TCATTGTAAGCAGGTAATGA+AGG | + | chr5_3:69416788-69416807 | None:intergenic | 35.0% | |
| ATTGTTGAGTCCTAATCCAA+TGG | + | chr5_3:69416900-69416919 | None:intergenic | 35.0% | |
| TGCAGGATTGAAAAATTGCT+AGG | + | chr5_3:69417010-69417029 | None:intergenic | 35.0% | |
| !! | TAGCAATTTTTCAATCCTGC+AGG | - | chr5_3:69417009-69417028 | Msa0827870:CDS | 35.0% |
| !! | AGTACAAGGTGTTTTTACGA+CGG | - | chr5_3:69417045-69417064 | Msa0827870:CDS | 35.0% |
| GTAACTTTAGTCCCTTGAAT+CGG | + | chr5_3:69417136-69417155 | None:intergenic | 35.0% | |
| ! | CTAAGTTGAGATTTGGATCA+AGG | - | chr5_3:69417155-69417174 | Msa0827870:CDS | 35.0% |
| AATCACCCTATTCATCTTCA+TGG | - | chr5_3:69417220-69417239 | Msa0827870:intron | 35.0% | |
| TATATTGTTGCTGAGGGATT+TGG | - | chr5_3:69417253-69417272 | Msa0827870:intron | 35.0% | |
| GAAATTGAGCTAATGTTACC+TGG | + | chr5_3:69417394-69417413 | None:intergenic | 35.0% | |
| GAGACTAAGTACATGACTAA+AGG | + | chr5_3:69417563-69417582 | None:intergenic | 35.0% | |
| GCAGTCAAATGAAATTGATG+TGG | + | chr5_3:69417764-69417783 | None:intergenic | 35.0% | |
| GTTTGATGTATGTAGGTGTT+TGG | - | chr5_3:69417894-69417913 | Msa0827870:intron | 35.0% | |
| TTGGATTATGCATTGTCACT+TGG | - | chr5_3:69417913-69417932 | Msa0827870:intron | 35.0% | |
| ATTGTTTGTTTCCCTGCATT+GGG | - | chr5_3:69418088-69418107 | Msa0827870:intron | 35.0% | |
| GAAAAAAAATCCCCAATGCA+GGG | + | chr5_3:69418102-69418121 | None:intergenic | 35.0% | |
| AGAAAAAAAATCCCCAATGC+AGG | + | chr5_3:69418103-69418122 | None:intergenic | 35.0% | |
| ATGTGTGTGAATGAAGGTTA+AGG | + | chr5_3:69414251-69414270 | None:intergenic | 35.0% | |
| TTAATTTCCAAAGTTGGACC+AGG | + | chr5_3:69414562-69414581 | None:intergenic | 35.0% | |
| GTTACAATGTCACCATTCAT+TGG | - | chr5_3:69414623-69414642 | Msa0827870:CDS | 35.0% | |
| !! | AAAAGTGTTTGCTTGCTTGT+GGG | + | chr5_3:69414762-69414781 | None:intergenic | 35.0% |
| !! | AAAAAGTGTTTGCTTGCTTG+TGG | + | chr5_3:69414763-69414782 | None:intergenic | 35.0% |
| TCTTAGTACAAGTGTGAAGA+AGG | + | chr5_3:69414790-69414809 | None:intergenic | 35.0% | |
| AAAAGGAATGTCACTCTACA+TGG | + | chr5_3:69415092-69415111 | None:intergenic | 35.0% | |
| ! | GCATTTTGAATCTTTAGGCA+TGG | - | chr5_3:69415337-69415356 | Msa0827870:CDS | 35.0% |
| TTAGACAAATCAGAACAGGA+TGG | - | chr5_3:69415362-69415381 | Msa0827870:CDS | 35.0% | |
| TAGACAAATCAGAACAGGAT+GGG | - | chr5_3:69415363-69415382 | Msa0827870:CDS | 35.0% | |
| TGTACCTTCTTGTCCATTAA+TGG | + | chr5_3:69415455-69415474 | None:intergenic | 35.0% | |
| ! | GATTATGTTCATGATGGAGA+TGG | - | chr5_3:69415865-69415884 | Msa0827870:CDS | 35.0% |
| ! | TCATGATGGAGATGGTTTAA+CGG | - | chr5_3:69415873-69415892 | Msa0827870:CDS | 35.0% |
| TACACTATTAATGGTCAACC+TGG | - | chr5_3:69416009-69416028 | Msa0827870:CDS | 35.0% | |
| TTGCTTATAATAGTGATCGG+AGG | - | chr5_3:69416307-69416326 | Msa0827870:intron | 35.0% | |
| ! | CACCTACTACTGTTAGTTTA+TGG | + | chr5_3:69416532-69416551 | None:intergenic | 35.0% |
| ! | ATGAGAACATTGGTTGTGAA+TGG | + | chr5_3:69416575-69416594 | None:intergenic | 35.0% |
| ACAACCAATGTTCTCATGTT+AGG | - | chr5_3:69416578-69416597 | Msa0827870:CDS | 35.0% | |
| TTTGTATTCAAGAATGGCAG+TGG | + | chr5_3:69416717-69416736 | None:intergenic | 35.0% | |
| TCATTGTAAGCAGGTAATGA+AGG | + | chr5_3:69416788-69416807 | None:intergenic | 35.0% | |
| ATTGTTGAGTCCTAATCCAA+TGG | + | chr5_3:69416900-69416919 | None:intergenic | 35.0% | |
| TGCAGGATTGAAAAATTGCT+AGG | + | chr5_3:69417010-69417029 | None:intergenic | 35.0% | |
| !! | TAGCAATTTTTCAATCCTGC+AGG | - | chr5_3:69417009-69417028 | Msa0827870:CDS | 35.0% |
| !! | AGTACAAGGTGTTTTTACGA+CGG | - | chr5_3:69417045-69417064 | Msa0827870:CDS | 35.0% |
| GTAACTTTAGTCCCTTGAAT+CGG | + | chr5_3:69417136-69417155 | None:intergenic | 35.0% | |
| ! | CTAAGTTGAGATTTGGATCA+AGG | - | chr5_3:69417155-69417174 | Msa0827870:CDS | 35.0% |
| AATCACCCTATTCATCTTCA+TGG | - | chr5_3:69417220-69417239 | Msa0827870:intron | 35.0% | |
| TATATTGTTGCTGAGGGATT+TGG | - | chr5_3:69417253-69417272 | Msa0827870:intron | 35.0% | |
| GAAATTGAGCTAATGTTACC+TGG | + | chr5_3:69417394-69417413 | None:intergenic | 35.0% | |
| GAGACTAAGTACATGACTAA+AGG | + | chr5_3:69417563-69417582 | None:intergenic | 35.0% | |
| GCAGTCAAATGAAATTGATG+TGG | + | chr5_3:69417764-69417783 | None:intergenic | 35.0% | |
| GTTTGATGTATGTAGGTGTT+TGG | - | chr5_3:69417894-69417913 | Msa0827870:intron | 35.0% | |
| TTGGATTATGCATTGTCACT+TGG | - | chr5_3:69417913-69417932 | Msa0827870:intron | 35.0% | |
| ATTGTTTGTTTCCCTGCATT+GGG | - | chr5_3:69418088-69418107 | Msa0827870:intron | 35.0% | |
| GAAAAAAAATCCCCAATGCA+GGG | + | chr5_3:69418102-69418121 | None:intergenic | 35.0% | |
| AGAAAAAAAATCCCCAATGC+AGG | + | chr5_3:69418103-69418122 | None:intergenic | 35.0% | |
| AAACTCGTGCTCATGAACTT+TGG | + | chr5_3:69414367-69414386 | None:intergenic | 40.0% | |
| CAAATGAGCATCACTGTGAA+TGG | - | chr5_3:69414529-69414548 | Msa0827870:exon | 40.0% | |
| ACTGTGAATGGACAATTTCC+TGG | - | chr5_3:69414541-69414560 | Msa0827870:CDS | 40.0% | |
| ACAATTTCCTGGTCCAACTT+TGG | - | chr5_3:69414552-69414571 | Msa0827870:CDS | 40.0% | |
| GGACATTGAGTCACAAATTC+TGG | + | chr5_3:69415397-69415416 | None:intergenic | 40.0% | |
| TAACTTTCTCCAGGACGAAT+AGG | + | chr5_3:69415418-69415437 | None:intergenic | 40.0% | |
| CTATAGGTGTAACTTTCTCC+AGG | + | chr5_3:69415427-69415446 | None:intergenic | 40.0% | |
| ! | ATGGACAAGAAGGTACACTT+TGG | - | chr5_3:69415458-69415477 | Msa0827870:CDS | 40.0% |
| GATTAGAGCTCCATAAACTG+TGG | + | chr5_3:69415512-69415531 | None:intergenic | 40.0% | |
| ! | AGCTCTAATCATTCACCCTA+AGG | - | chr5_3:69415522-69415541 | Msa0827870:CDS | 40.0% |
| CTAATCATTCACCCTAAGGA+AGG | - | chr5_3:69415526-69415545 | Msa0827870:CDS | 40.0% | |
| GATAAGCATCTCCTTCCTTA+GGG | + | chr5_3:69415540-69415559 | None:intergenic | 40.0% | |
| CTTGTCTCACAACATCCATA+GGG | + | chr5_3:69415951-69415970 | None:intergenic | 40.0% | |
| CTTTACAAGTGCTCTACCAA+AGG | - | chr5_3:69416036-69416055 | Msa0827870:CDS | 40.0% | |
| CATATGATCATTGGCAATGC+AGG | - | chr5_3:69416413-69416432 | Msa0827870:intron | 40.0% | |
| !! | CAGCATTGATTACTCTTAGG+AGG | + | chr5_3:69416475-69416494 | None:intergenic | 40.0% |
| !! | GTGCAGCATTGATTACTCTT+AGG | + | chr5_3:69416478-69416497 | None:intergenic | 40.0% |
| GGTTGTGAATGGTTTGACAT+AGG | + | chr5_3:69416564-69416583 | None:intergenic | 40.0% | |
| AGGTCCTAACATGAGAACAT+TGG | + | chr5_3:69416585-69416604 | None:intergenic | 40.0% | |
| AATGTTCTCATGTTAGGACC+TGG | - | chr5_3:69416584-69416603 | Msa0827870:CDS | 40.0% | |
| GGATTAGAACATCAGTGGTT+TGG | + | chr5_3:69416610-69416629 | None:intergenic | 40.0% | |
| ACCACTGATGTTCTAATCCA+AGG | - | chr5_3:69416611-69416630 | Msa0827870:CDS | 40.0% | |
| ! | ACCTTGGATTAGAACATCAG+TGG | + | chr5_3:69416615-69416634 | None:intergenic | 40.0% |
| !! | TGTAGTATCTTGATGGTGGT+TGG | + | chr5_3:69416640-69416659 | None:intergenic | 40.0% |
| ! | GTGTTTGTGTCATTGTAAGC+AGG | + | chr5_3:69416797-69416816 | None:intergenic | 40.0% |
| AATCAATGTCAAGGACCGAA+CGG | - | chr5_3:69416941-69416960 | Msa0827870:intron | 40.0% | |
| GCTCATAAACTTGGAGTACA+AGG | - | chr5_3:69417031-69417050 | Msa0827870:CDS | 40.0% | |
| ACCGGTGTAATCAAATTGCA+CGG | + | chr5_3:69417089-69417108 | None:intergenic | 40.0% | |
| ATTACACCGGTAATGTGAGT+CGG | - | chr5_3:69417098-69417117 | Msa0827870:CDS | 40.0% | |
| AGATGAATAGGGTGATTCTC+AGG | + | chr5_3:69417217-69417236 | None:intergenic | 40.0% | |
| ACTGTTGCTGTACCTGTTAA+TGG | - | chr5_3:69417337-69417356 | Msa0827870:intron | 40.0% | |
| TTGCTGTACCTGTTAATGGT+TGG | - | chr5_3:69417341-69417360 | Msa0827870:intron | 40.0% | |
| TGCTGTACCTGTTAATGGTT+GGG | - | chr5_3:69417342-69417361 | Msa0827870:intron | 40.0% | |
| ATAACTGCCCAACCATTAAC+AGG | + | chr5_3:69417352-69417371 | None:intergenic | 40.0% | |
| !! | AGATTTGTTGCTGACAATCC+AGG | - | chr5_3:69417373-69417392 | Msa0827870:intron | 40.0% |
| ! | TGTTTCTGTGACCATAACTG+AGG | - | chr5_3:69417738-69417757 | Msa0827870:intron | 40.0% |
| AATTGATGTGGCCTCAGTTA+TGG | + | chr5_3:69417752-69417771 | None:intergenic | 40.0% | |
| CAGGACCAAGTATCTATATG+CGG | - | chr5_3:69417793-69417812 | Msa0827870:intron | 40.0% | |
| GCGGTTGCGATATAAAACTT+TGG | - | chr5_3:69417812-69417831 | Msa0827870:intron | 40.0% | |
| ! | TGTCACTTGGATGTTCACAT+TGG | - | chr5_3:69417926-69417945 | Msa0827870:intron | 40.0% |
| ACTTGGATGTTCACATTGGA+TGG | - | chr5_3:69417930-69417949 | Msa0827870:intron | 40.0% | |
| CTTGGATGTTCACATTGGAT+GGG | - | chr5_3:69417931-69417950 | Msa0827870:intron | 40.0% | |
| TTGGATGTTCACATTGGATG+GGG | - | chr5_3:69417932-69417951 | Msa0827870:intron | 40.0% | |
| !!! | ACTGTGTTTTTGGTAGAGGA+TGG | - | chr5_3:69417962-69417981 | Msa0827870:CDS | 40.0% |
| !! | TTTTTGGTAGAGGATGGAGA+AGG | - | chr5_3:69417968-69417987 | Msa0827870:CDS | 40.0% |
| ! | TTTTGGTAGAGGATGGAGAA+GGG | - | chr5_3:69417969-69417988 | Msa0827870:CDS | 40.0% |
| GATTATCCTAACACAAAGGC+AGG | + | chr5_3:69418027-69418046 | None:intergenic | 40.0% | |
| CATTGTTTGTTTCCCTGCAT+TGG | - | chr5_3:69418087-69418106 | Msa0827870:intron | 40.0% | |
| TTGTTTGTTTCCCTGCATTG+GGG | - | chr5_3:69418089-69418108 | Msa0827870:intron | 40.0% | |
| GATAGTGTCACAAACCCTAT+TGG | - | chr5_3:69418212-69418231 | Msa0827870:CDS | 40.0% | |
| AAACTCGTGCTCATGAACTT+TGG | + | chr5_3:69414367-69414386 | None:intergenic | 40.0% | |
| CAAATGAGCATCACTGTGAA+TGG | - | chr5_3:69414529-69414548 | Msa0827870:exon | 40.0% | |
| ACTGTGAATGGACAATTTCC+TGG | - | chr5_3:69414541-69414560 | Msa0827870:CDS | 40.0% | |
| ACAATTTCCTGGTCCAACTT+TGG | - | chr5_3:69414552-69414571 | Msa0827870:CDS | 40.0% | |
| GGACATTGAGTCACAAATTC+TGG | + | chr5_3:69415397-69415416 | None:intergenic | 40.0% | |
| TAACTTTCTCCAGGACGAAT+AGG | + | chr5_3:69415418-69415437 | None:intergenic | 40.0% | |
| CTATAGGTGTAACTTTCTCC+AGG | + | chr5_3:69415427-69415446 | None:intergenic | 40.0% | |
| ! | ATGGACAAGAAGGTACACTT+TGG | - | chr5_3:69415458-69415477 | Msa0827870:CDS | 40.0% |
| GATTAGAGCTCCATAAACTG+TGG | + | chr5_3:69415512-69415531 | None:intergenic | 40.0% | |
| ! | AGCTCTAATCATTCACCCTA+AGG | - | chr5_3:69415522-69415541 | Msa0827870:CDS | 40.0% |
| CTAATCATTCACCCTAAGGA+AGG | - | chr5_3:69415526-69415545 | Msa0827870:CDS | 40.0% | |
| GATAAGCATCTCCTTCCTTA+GGG | + | chr5_3:69415540-69415559 | None:intergenic | 40.0% | |
| CTTGTCTCACAACATCCATA+GGG | + | chr5_3:69415951-69415970 | None:intergenic | 40.0% | |
| CTTTACAAGTGCTCTACCAA+AGG | - | chr5_3:69416036-69416055 | Msa0827870:CDS | 40.0% | |
| CATATGATCATTGGCAATGC+AGG | - | chr5_3:69416413-69416432 | Msa0827870:intron | 40.0% | |
| !! | CAGCATTGATTACTCTTAGG+AGG | + | chr5_3:69416475-69416494 | None:intergenic | 40.0% |
| !! | GTGCAGCATTGATTACTCTT+AGG | + | chr5_3:69416478-69416497 | None:intergenic | 40.0% |
| GGTTGTGAATGGTTTGACAT+AGG | + | chr5_3:69416564-69416583 | None:intergenic | 40.0% | |
| AGGTCCTAACATGAGAACAT+TGG | + | chr5_3:69416585-69416604 | None:intergenic | 40.0% | |
| AATGTTCTCATGTTAGGACC+TGG | - | chr5_3:69416584-69416603 | Msa0827870:CDS | 40.0% | |
| GGATTAGAACATCAGTGGTT+TGG | + | chr5_3:69416610-69416629 | None:intergenic | 40.0% | |
| ACCACTGATGTTCTAATCCA+AGG | - | chr5_3:69416611-69416630 | Msa0827870:CDS | 40.0% | |
| ! | ACCTTGGATTAGAACATCAG+TGG | + | chr5_3:69416615-69416634 | None:intergenic | 40.0% |
| !! | TGTAGTATCTTGATGGTGGT+TGG | + | chr5_3:69416640-69416659 | None:intergenic | 40.0% |
| ! | GTGTTTGTGTCATTGTAAGC+AGG | + | chr5_3:69416797-69416816 | None:intergenic | 40.0% |
| AATCAATGTCAAGGACCGAA+CGG | - | chr5_3:69416941-69416960 | Msa0827870:intron | 40.0% | |
| GCTCATAAACTTGGAGTACA+AGG | - | chr5_3:69417031-69417050 | Msa0827870:CDS | 40.0% | |
| ACCGGTGTAATCAAATTGCA+CGG | + | chr5_3:69417089-69417108 | None:intergenic | 40.0% | |
| ATTACACCGGTAATGTGAGT+CGG | - | chr5_3:69417098-69417117 | Msa0827870:CDS | 40.0% | |
| AGATGAATAGGGTGATTCTC+AGG | + | chr5_3:69417217-69417236 | None:intergenic | 40.0% | |
| ACTGTTGCTGTACCTGTTAA+TGG | - | chr5_3:69417337-69417356 | Msa0827870:intron | 40.0% | |
| TTGCTGTACCTGTTAATGGT+TGG | - | chr5_3:69417341-69417360 | Msa0827870:intron | 40.0% | |
| TGCTGTACCTGTTAATGGTT+GGG | - | chr5_3:69417342-69417361 | Msa0827870:intron | 40.0% | |
| ATAACTGCCCAACCATTAAC+AGG | + | chr5_3:69417352-69417371 | None:intergenic | 40.0% | |
| !! | AGATTTGTTGCTGACAATCC+AGG | - | chr5_3:69417373-69417392 | Msa0827870:intron | 40.0% |
| ! | TGTTTCTGTGACCATAACTG+AGG | - | chr5_3:69417738-69417757 | Msa0827870:intron | 40.0% |
| AATTGATGTGGCCTCAGTTA+TGG | + | chr5_3:69417752-69417771 | None:intergenic | 40.0% | |
| CAGGACCAAGTATCTATATG+CGG | - | chr5_3:69417793-69417812 | Msa0827870:intron | 40.0% | |
| GCGGTTGCGATATAAAACTT+TGG | - | chr5_3:69417812-69417831 | Msa0827870:intron | 40.0% | |
| ! | TGTCACTTGGATGTTCACAT+TGG | - | chr5_3:69417926-69417945 | Msa0827870:intron | 40.0% |
| ACTTGGATGTTCACATTGGA+TGG | - | chr5_3:69417930-69417949 | Msa0827870:intron | 40.0% | |
| CTTGGATGTTCACATTGGAT+GGG | - | chr5_3:69417931-69417950 | Msa0827870:intron | 40.0% | |
| TTGGATGTTCACATTGGATG+GGG | - | chr5_3:69417932-69417951 | Msa0827870:intron | 40.0% | |
| !!! | ACTGTGTTTTTGGTAGAGGA+TGG | - | chr5_3:69417962-69417981 | Msa0827870:CDS | 40.0% |
| !! | TTTTTGGTAGAGGATGGAGA+AGG | - | chr5_3:69417968-69417987 | Msa0827870:CDS | 40.0% |
| ! | TTTTGGTAGAGGATGGAGAA+GGG | - | chr5_3:69417969-69417988 | Msa0827870:CDS | 40.0% |
| GATTATCCTAACACAAAGGC+AGG | + | chr5_3:69418027-69418046 | None:intergenic | 40.0% | |
| CATTGTTTGTTTCCCTGCAT+TGG | - | chr5_3:69418087-69418106 | Msa0827870:intron | 40.0% | |
| TTGTTTGTTTCCCTGCATTG+GGG | - | chr5_3:69418089-69418108 | Msa0827870:intron | 40.0% | |
| GATAGTGTCACAAACCCTAT+TGG | - | chr5_3:69418212-69418231 | Msa0827870:CDS | 40.0% | |
| TACAAGCAACTCCAGTGAAG+AGG | - | chr5_3:69414494-69414513 | Msa0827870:three_prime_UTR | 45.0% | |
| GGGGTTAGACAAATCAGAAC+AGG | - | chr5_3:69415358-69415377 | Msa0827870:CDS | 45.0% | |
| ACTCAATGTCCTATTCGTCC+TGG | - | chr5_3:69415406-69415425 | Msa0827870:CDS | 45.0% | |
| ! | GACAAGAAGGTACACTTTGG+TGG | - | chr5_3:69415461-69415480 | Msa0827870:CDS | 45.0% |
| TGGCTTAGAGCCACAGTTTA+TGG | - | chr5_3:69415499-69415518 | Msa0827870:CDS | 45.0% | |
| GGATAAGCATCTCCTTCCTT+AGG | + | chr5_3:69415541-69415560 | None:intergenic | 45.0% | |
| ! | TCACGCTTTGGCTTAGTGAA+AGG | + | chr5_3:69415562-69415581 | None:intergenic | 45.0% |
| AGAATGGGTGTTTCACGCTT+TGG | + | chr5_3:69415574-69415593 | None:intergenic | 45.0% | |
| CGTGAAACACCCATTCTTCT+AGG | - | chr5_3:69415577-69415596 | Msa0827870:CDS | 45.0% | |
| GCTTGTCTCACAACATCCAT+AGG | + | chr5_3:69415952-69415971 | None:intergenic | 45.0% | |
| GAGCACTTGTAAAGATCACC+AGG | + | chr5_3:69416030-69416049 | None:intergenic | 45.0% | |
| GCGATGTAGTATCTTGATGG+TGG | + | chr5_3:69416644-69416663 | None:intergenic | 45.0% | |
| CCATCAAGATACTACATCGC+CGG | - | chr5_3:69416644-69416663 | Msa0827870:intron | 45.0% | |
| CATCAAGATACTACATCGCC+GGG | - | chr5_3:69416645-69416664 | Msa0827870:intron | 45.0% | |
| ATCATCACCTTGTCCTGCAA+AGG | - | chr5_3:69416736-69416755 | Msa0827870:intron | 45.0% | |
| TCATCACCTTGTCCTGCAAA+GGG | - | chr5_3:69416737-69416756 | Msa0827870:intron | 45.0% | |
| ! | GCAGGTAATGAAGGCATGAT+TGG | + | chr5_3:69416779-69416798 | None:intergenic | 45.0% |
| ATCCTGCAGGCTCATAAACT+TGG | - | chr5_3:69417022-69417041 | Msa0827870:CDS | 45.0% | |
| !! | AATTGCACGGGAGGTTTTGT+GGG | + | chr5_3:69417076-69417095 | None:intergenic | 45.0% |
| ! | AAATTGCACGGGAGGTTTTG+TGG | + | chr5_3:69417077-69417096 | None:intergenic | 45.0% |
| GTGTAATCAAATTGCACGGG+AGG | + | chr5_3:69417085-69417104 | None:intergenic | 45.0% | |
| CCGGTGTAATCAAATTGCAC+GGG | + | chr5_3:69417088-69417107 | None:intergenic | 45.0% | |
| CCCGTGCAATTTGATTACAC+CGG | - | chr5_3:69417085-69417104 | Msa0827870:CDS | 45.0% | |
| ! | CAATGACCGACTCACATTAC+CGG | + | chr5_3:69417107-69417126 | None:intergenic | 45.0% |
| GTAATGTGAGTCGGTCATTG+TGG | - | chr5_3:69417107-69417126 | Msa0827870:CDS | 45.0% | |
| ! | TCATTGTGGCAACCGATTCA+AGG | - | chr5_3:69417121-69417140 | Msa0827870:CDS | 45.0% |
| ! | CATTGTGGCAACCGATTCAA+GGG | - | chr5_3:69417122-69417141 | Msa0827870:CDS | 45.0% |
| GAGATTTGGATCAAGGGTTC+AGG | - | chr5_3:69417162-69417181 | Msa0827870:CDS | 45.0% | |
| ACCTTGTTGATCCACCTATG+AGG | - | chr5_3:69417311-69417330 | Msa0827870:intron | 45.0% | |
| TCCTCATAGGTGGATCAACA+AGG | + | chr5_3:69417315-69417334 | None:intergenic | 45.0% | |
| ACAGCAACAGTGTTCCTCAT+AGG | + | chr5_3:69417328-69417347 | None:intergenic | 45.0% | |
| ATTTGACTGCGATTCTCTGC+AGG | - | chr5_3:69417774-69417793 | Msa0827870:intron | 45.0% | |
| CGCAACCGCATATAGATACT+TGG | + | chr5_3:69417801-69417820 | None:intergenic | 45.0% | |
| TGTTCACATTGGATGGGGTT+TGG | - | chr5_3:69417937-69417956 | Msa0827870:CDS | 45.0% | |
| ! | GGGTTTGGCTACTGTGTTTT+TGG | - | chr5_3:69417952-69417971 | Msa0827870:CDS | 45.0% |
| !!! | GGCTACTGTGTTTTTGGTAG+AGG | - | chr5_3:69417958-69417977 | Msa0827870:CDS | 45.0% |
| GGGTTTGTGACACTATCAGA+TGG | + | chr5_3:69418209-69418228 | None:intergenic | 45.0% | |
| TACAAGCAACTCCAGTGAAG+AGG | - | chr5_3:69414494-69414513 | Msa0827870:three_prime_UTR | 45.0% | |
| GGGGTTAGACAAATCAGAAC+AGG | - | chr5_3:69415358-69415377 | Msa0827870:CDS | 45.0% | |
| ACTCAATGTCCTATTCGTCC+TGG | - | chr5_3:69415406-69415425 | Msa0827870:CDS | 45.0% | |
| ! | GACAAGAAGGTACACTTTGG+TGG | - | chr5_3:69415461-69415480 | Msa0827870:CDS | 45.0% |
| TGGCTTAGAGCCACAGTTTA+TGG | - | chr5_3:69415499-69415518 | Msa0827870:CDS | 45.0% | |
| GGATAAGCATCTCCTTCCTT+AGG | + | chr5_3:69415541-69415560 | None:intergenic | 45.0% | |
| ! | TCACGCTTTGGCTTAGTGAA+AGG | + | chr5_3:69415562-69415581 | None:intergenic | 45.0% |
| AGAATGGGTGTTTCACGCTT+TGG | + | chr5_3:69415574-69415593 | None:intergenic | 45.0% | |
| CGTGAAACACCCATTCTTCT+AGG | - | chr5_3:69415577-69415596 | Msa0827870:CDS | 45.0% | |
| GCTTGTCTCACAACATCCAT+AGG | + | chr5_3:69415952-69415971 | None:intergenic | 45.0% | |
| GAGCACTTGTAAAGATCACC+AGG | + | chr5_3:69416030-69416049 | None:intergenic | 45.0% | |
| GCGATGTAGTATCTTGATGG+TGG | + | chr5_3:69416644-69416663 | None:intergenic | 45.0% | |
| CCATCAAGATACTACATCGC+CGG | - | chr5_3:69416644-69416663 | Msa0827870:intron | 45.0% | |
| CATCAAGATACTACATCGCC+GGG | - | chr5_3:69416645-69416664 | Msa0827870:intron | 45.0% | |
| ATCATCACCTTGTCCTGCAA+AGG | - | chr5_3:69416736-69416755 | Msa0827870:intron | 45.0% | |
| TCATCACCTTGTCCTGCAAA+GGG | - | chr5_3:69416737-69416756 | Msa0827870:intron | 45.0% | |
| ! | GCAGGTAATGAAGGCATGAT+TGG | + | chr5_3:69416779-69416798 | None:intergenic | 45.0% |
| ATCCTGCAGGCTCATAAACT+TGG | - | chr5_3:69417022-69417041 | Msa0827870:CDS | 45.0% | |
| !! | AATTGCACGGGAGGTTTTGT+GGG | + | chr5_3:69417076-69417095 | None:intergenic | 45.0% |
| ! | AAATTGCACGGGAGGTTTTG+TGG | + | chr5_3:69417077-69417096 | None:intergenic | 45.0% |
| GTGTAATCAAATTGCACGGG+AGG | + | chr5_3:69417085-69417104 | None:intergenic | 45.0% | |
| CCGGTGTAATCAAATTGCAC+GGG | + | chr5_3:69417088-69417107 | None:intergenic | 45.0% | |
| CCCGTGCAATTTGATTACAC+CGG | - | chr5_3:69417085-69417104 | Msa0827870:CDS | 45.0% | |
| ! | CAATGACCGACTCACATTAC+CGG | + | chr5_3:69417107-69417126 | None:intergenic | 45.0% |
| GTAATGTGAGTCGGTCATTG+TGG | - | chr5_3:69417107-69417126 | Msa0827870:CDS | 45.0% | |
| ! | TCATTGTGGCAACCGATTCA+AGG | - | chr5_3:69417121-69417140 | Msa0827870:CDS | 45.0% |
| ! | CATTGTGGCAACCGATTCAA+GGG | - | chr5_3:69417122-69417141 | Msa0827870:CDS | 45.0% |
| GAGATTTGGATCAAGGGTTC+AGG | - | chr5_3:69417162-69417181 | Msa0827870:CDS | 45.0% | |
| ACCTTGTTGATCCACCTATG+AGG | - | chr5_3:69417311-69417330 | Msa0827870:intron | 45.0% | |
| TCCTCATAGGTGGATCAACA+AGG | + | chr5_3:69417315-69417334 | None:intergenic | 45.0% | |
| ACAGCAACAGTGTTCCTCAT+AGG | + | chr5_3:69417328-69417347 | None:intergenic | 45.0% | |
| ATTTGACTGCGATTCTCTGC+AGG | - | chr5_3:69417774-69417793 | Msa0827870:intron | 45.0% | |
| CGCAACCGCATATAGATACT+TGG | + | chr5_3:69417801-69417820 | None:intergenic | 45.0% | |
| TGTTCACATTGGATGGGGTT+TGG | - | chr5_3:69417937-69417956 | Msa0827870:CDS | 45.0% | |
| ! | GGGTTTGGCTACTGTGTTTT+TGG | - | chr5_3:69417952-69417971 | Msa0827870:CDS | 45.0% |
| !!! | GGCTACTGTGTTTTTGGTAG+AGG | - | chr5_3:69417958-69417977 | Msa0827870:CDS | 45.0% |
| GGGTTTGTGACACTATCAGA+TGG | + | chr5_3:69418209-69418228 | None:intergenic | 45.0% | |
| !! | ATTGTATAAAAAATATAATT+AGG | - | chr5_3:69417422-69417441 | Msa0827870:intron | 5.0% |
| !! | TTGTATAAAAAATATAATTA+GGG | - | chr5_3:69417423-69417442 | Msa0827870:intron | 5.0% |
| !! | TGTAAAAATTAATAAAAATA+GGG | + | chr5_3:69417530-69417549 | None:intergenic | 5.0% |
| !! | TTGTAAAAATTAATAAAAAT+AGG | + | chr5_3:69417531-69417550 | None:intergenic | 5.0% |
| !!! | TTTTATTAATTTTTACAAAA+TGG | - | chr5_3:69417533-69417552 | Msa0827870:intron | 5.0% |
| !!! | AAAAAATTGTAAATTTTATA+GGG | - | chr5_3:69417637-69417656 | Msa0827870:intron | 5.0% |
| !! | ATTGTATAAAAAATATAATT+AGG | - | chr5_3:69417422-69417441 | Msa0827870:intron | 5.0% |
| !! | TTGTATAAAAAATATAATTA+GGG | - | chr5_3:69417423-69417442 | Msa0827870:intron | 5.0% |
| !! | TGTAAAAATTAATAAAAATA+GGG | + | chr5_3:69417530-69417549 | None:intergenic | 5.0% |
| !! | TTGTAAAAATTAATAAAAAT+AGG | + | chr5_3:69417531-69417550 | None:intergenic | 5.0% |
| !!! | TTTTATTAATTTTTACAAAA+TGG | - | chr5_3:69417533-69417552 | Msa0827870:intron | 5.0% |
| !!! | AAAAAATTGTAAATTTTATA+GGG | - | chr5_3:69417637-69417656 | Msa0827870:intron | 5.0% |
| !! | ATCAGAACAGGATGGGCTGA+TGG | - | chr5_3:69415370-69415389 | Msa0827870:CDS | 50.0% |
| GGTGGCATGCTCATAGTTCA+TGG | - | chr5_3:69415479-69415498 | Msa0827870:CDS | 50.0% | |
| ! | ATGGTGGGATGCAAACCCTA+TGG | - | chr5_3:69415933-69415952 | Msa0827870:CDS | 50.0% |
| GTGAGACAAGCCACACAAAC+AGG | - | chr5_3:69415961-69415980 | Msa0827870:CDS | 50.0% | |
| ! | AGAACATCAGTGGTTTGGCC+AGG | + | chr5_3:69416605-69416624 | None:intergenic | 50.0% |
| !! | TTGATGGTGGTTGGTCACCT+TGG | + | chr5_3:69416631-69416650 | None:intergenic | 50.0% |
| CCGGCGATGTAGTATCTTGA+TGG | + | chr5_3:69416647-69416666 | None:intergenic | 50.0% | |
| ! | ACGCAGCATTTTGAGCCGAT+TGG | + | chr5_3:69416679-69416698 | None:intergenic | 50.0% |
| CATCACCTTGTCCTGCAAAG+GGG | - | chr5_3:69416738-69416757 | Msa0827870:intron | 50.0% | |
| ATCACCTTGTCCTGCAAAGG+GGG | - | chr5_3:69416739-69416758 | Msa0827870:intron | 50.0% | |
| ATATTTGCACCCCCCTTTGC+AGG | + | chr5_3:69416752-69416771 | None:intergenic | 50.0% | |
| GAAGTGAACCGTGTACCGTT+CGG | + | chr5_3:69416959-69416978 | None:intergenic | 50.0% | |
| CTCCAAGTTTATGAGCCTGC+AGG | + | chr5_3:69417027-69417046 | None:intergenic | 50.0% | |
| GCAACAGTGTTCCTCATAGG+TGG | + | chr5_3:69417325-69417344 | None:intergenic | 50.0% | |
| AGAGGATGGAGAAGGGCTAT+TGG | - | chr5_3:69417976-69417995 | Msa0827870:CDS | 50.0% | |
| TAACACAAAGGCAGGTCCTC+AGG | + | chr5_3:69418019-69418038 | None:intergenic | 50.0% | |
| TGAGGACCTGCCTTTGTGTT+AGG | - | chr5_3:69418018-69418037 | Msa0827870:CDS | 50.0% | |
| !! | ATCAGAACAGGATGGGCTGA+TGG | - | chr5_3:69415370-69415389 | Msa0827870:CDS | 50.0% |
| GGTGGCATGCTCATAGTTCA+TGG | - | chr5_3:69415479-69415498 | Msa0827870:CDS | 50.0% | |
| ! | ATGGTGGGATGCAAACCCTA+TGG | - | chr5_3:69415933-69415952 | Msa0827870:CDS | 50.0% |
| GTGAGACAAGCCACACAAAC+AGG | - | chr5_3:69415961-69415980 | Msa0827870:CDS | 50.0% | |
| ! | AGAACATCAGTGGTTTGGCC+AGG | + | chr5_3:69416605-69416624 | None:intergenic | 50.0% |
| !! | TTGATGGTGGTTGGTCACCT+TGG | + | chr5_3:69416631-69416650 | None:intergenic | 50.0% |
| CCGGCGATGTAGTATCTTGA+TGG | + | chr5_3:69416647-69416666 | None:intergenic | 50.0% | |
| ! | ACGCAGCATTTTGAGCCGAT+TGG | + | chr5_3:69416679-69416698 | None:intergenic | 50.0% |
| CATCACCTTGTCCTGCAAAG+GGG | - | chr5_3:69416738-69416757 | Msa0827870:intron | 50.0% | |
| ATCACCTTGTCCTGCAAAGG+GGG | - | chr5_3:69416739-69416758 | Msa0827870:intron | 50.0% | |
| ATATTTGCACCCCCCTTTGC+AGG | + | chr5_3:69416752-69416771 | None:intergenic | 50.0% | |
| GAAGTGAACCGTGTACCGTT+CGG | + | chr5_3:69416959-69416978 | None:intergenic | 50.0% | |
| CTCCAAGTTTATGAGCCTGC+AGG | + | chr5_3:69417027-69417046 | None:intergenic | 50.0% | |
| GCAACAGTGTTCCTCATAGG+TGG | + | chr5_3:69417325-69417344 | None:intergenic | 50.0% | |
| AGAGGATGGAGAAGGGCTAT+TGG | - | chr5_3:69417976-69417995 | Msa0827870:CDS | 50.0% | |
| TAACACAAAGGCAGGTCCTC+AGG | + | chr5_3:69418019-69418038 | None:intergenic | 50.0% | |
| TGAGGACCTGCCTTTGTGTT+AGG | - | chr5_3:69418018-69418037 | Msa0827870:CDS | 50.0% | |
| GTGTTGCACAGCCTCTTCAC+TGG | + | chr5_3:69414508-69414527 | None:intergenic | 55.0% | |
| TGGAGCTGCTCCTGTTTGTG+TGG | + | chr5_3:69415974-69415993 | None:intergenic | 55.0% | |
| TCACCTTGTCCTGCAAAGGG+GGG | - | chr5_3:69416740-69416759 | Msa0827870:intron | 55.0% | |
| GTCAAGGACCGAACGGTACA+CGG | - | chr5_3:69416948-69416967 | Msa0827870:intron | 55.0% | |
| GTCCATAGAAGCTCCTCCTG+AGG | - | chr5_3:69418000-69418019 | Msa0827870:CDS | 55.0% | |
| GTCCTCAGGAGGAGCTTCTA+TGG | + | chr5_3:69418005-69418024 | None:intergenic | 55.0% | |
| GTGTTGCACAGCCTCTTCAC+TGG | + | chr5_3:69414508-69414527 | None:intergenic | 55.0% | |
| TGGAGCTGCTCCTGTTTGTG+TGG | + | chr5_3:69415974-69415993 | None:intergenic | 55.0% | |
| TCACCTTGTCCTGCAAAGGG+GGG | - | chr5_3:69416740-69416759 | Msa0827870:intron | 55.0% | |
| GTCAAGGACCGAACGGTACA+CGG | - | chr5_3:69416948-69416967 | Msa0827870:intron | 55.0% | |
| GTCCATAGAAGCTCCTCCTG+AGG | - | chr5_3:69418000-69418019 | Msa0827870:CDS | 55.0% | |
| GTCCTCAGGAGGAGCTTCTA+TGG | + | chr5_3:69418005-69418024 | None:intergenic | 55.0% | |
| CACAAAGGCAGGTCCTCAGG+AGG | + | chr5_3:69418016-69418035 | None:intergenic | 60.0% | |
| CACAAAGGCAGGTCCTCAGG+AGG | + | chr5_3:69418016-69418035 | None:intergenic | 60.0% | |
| AGCCGATTGGTAAGCGCGCC+CGG | + | chr5_3:69416666-69416685 | None:intergenic | 65.0% | |
| GCACCCCCCTTTGCAGGACA+AGG | + | chr5_3:69416746-69416765 | None:intergenic | 65.0% | |
| AGCCGATTGGTAAGCGCGCC+CGG | + | chr5_3:69416666-69416685 | None:intergenic | 65.0% | |
| GCACCCCCCTTTGCAGGACA+AGG | + | chr5_3:69416746-69416765 | None:intergenic | 65.0% | |
| CGCCGGGCGCGCTTACCAAT+CGG | - | chr5_3:69416661-69416680 | Msa0827870:intron | 70.0% | |
| CGCCGGGCGCGCTTACCAAT+CGG | - | chr5_3:69416661-69416680 | Msa0827870:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 69414234 | 69418345 | 69414234 | ID=Msa0827870;Name=Msa0827870 |
| chr5_3 | mRNA | 69414234 | 69418345 | 69414234 | ID=Msa0827870-mRNA-1;Parent=Msa0827870;Name=Msa0827870-mRNA-1;_AED=0.05;_eAED=0.05;_QI=69|1|1|1|1|1|6|306|567 |
| chr5_3 | exon | 69414234 | 69414670 | 69414234 | ID=Msa0827870-mRNA-1:exon:21869;Parent=Msa0827870-mRNA-1 |
| chr5_3 | exon | 69415185 | 69416144 | 69415185 | ID=Msa0827870-mRNA-1:exon:21868;Parent=Msa0827870-mRNA-1 |
| chr5_3 | exon | 69416522 | 69416650 | 69416522 | ID=Msa0827870-mRNA-1:exon:21867;Parent=Msa0827870-mRNA-1 |
| chr5_3 | exon | 69416981 | 69417225 | 69416981 | ID=Msa0827870-mRNA-1:exon:21866;Parent=Msa0827870-mRNA-1 |
| chr5_3 | exon | 69417935 | 69418086 | 69417935 | ID=Msa0827870-mRNA-1:exon:21865;Parent=Msa0827870-mRNA-1 |
| chr5_3 | exon | 69418190 | 69418345 | 69418190 | ID=Msa0827870-mRNA-1:exon:21864;Parent=Msa0827870-mRNA-1 |
| chr5_3 | five_prime_UTR | 69418277 | 69418345 | 69418277 | ID=Msa0827870-mRNA-1:five_prime_utr;Parent=Msa0827870-mRNA-1 |
| chr5_3 | CDS | 69418190 | 69418276 | 69418190 | ID=Msa0827870-mRNA-1:cds;Parent=Msa0827870-mRNA-1 |
| chr5_3 | CDS | 69417935 | 69418086 | 69417935 | ID=Msa0827870-mRNA-1:cds;Parent=Msa0827870-mRNA-1 |
| chr5_3 | CDS | 69416981 | 69417225 | 69416981 | ID=Msa0827870-mRNA-1:cds;Parent=Msa0827870-mRNA-1 |
| chr5_3 | CDS | 69416522 | 69416650 | 69416522 | ID=Msa0827870-mRNA-1:cds;Parent=Msa0827870-mRNA-1 |
| chr5_3 | CDS | 69415185 | 69416144 | 69415185 | ID=Msa0827870-mRNA-1:cds;Parent=Msa0827870-mRNA-1 |
| chr5_3 | CDS | 69414540 | 69414670 | 69414540 | ID=Msa0827870-mRNA-1:cds;Parent=Msa0827870-mRNA-1 |
| chr5_3 | three_prime_UTR | 69414234 | 69414539 | 69414234 | ID=Msa0827870-mRNA-1:three_prime_utr;Parent=Msa0827870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
