Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683960 | XP_003606662.2 | 99.422 | 346 | 1 | 1 | 1 | 346 | 1 | 345 | 0.0 | 708 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683960 | sp|Q9SN95|UXS5_ARATH | 89.971 | 339 | 34 | 0 | 6 | 344 | 2 | 340 | 0.0 | 626 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683960 | G7JUS9 | 99.422 | 346 | 1 | 1 | 1 | 346 | 1 | 345 | 0.0 | 708 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025160 | Msa0683960 | 0.815127 | 1.084037e-51 | -8.615850e-47 |
| Msa0034210 | Msa0683960 | 0.804610 | 1.988926e-49 | -8.615850e-47 |
| Msa0077340 | Msa0683960 | 0.818384 | 2.015963e-52 | -8.615850e-47 |
| Msa0077560 | Msa0683960 | 0.806381 | 8.454642e-50 | -8.615850e-47 |
| Msa0603120 | Msa0683960 | 0.832355 | 9.913549e-56 | -8.615850e-47 |
| Msa0611210 | Msa0683960 | 0.802924 | 4.452910e-49 | -8.615850e-47 |
| Msa0612350 | Msa0683960 | 0.801878 | 7.315520e-49 | -8.615850e-47 |
| Msa0644150 | Msa0683960 | 0.816827 | 4.523407e-52 | -8.615850e-47 |
| Msa0683960 | Msa0706230 | 0.813531 | 2.442189e-51 | -8.615850e-47 |
| Msa0683960 | Msa0735780 | 0.806203 | 9.220027e-50 | -8.615850e-47 |
| Msa0683960 | Msa0738700 | 0.831312 | 1.792439e-55 | -8.615850e-47 |
| Msa0683960 | Msa0756620 | 0.806166 | 9.386023e-50 | -8.615850e-47 |
| Msa0683960 | Msa0783850 | 0.840512 | 8.317741e-58 | -8.615850e-47 |
| Msa0683960 | Msa0818710 | 0.812812 | 3.511259e-51 | -8.615850e-47 |
| Msa0683960 | Msa0818720 | 0.817865 | 2.641637e-52 | -8.615850e-47 |
| Msa0683960 | Msa0818760 | 0.824258 | 8.897997e-54 | -8.615850e-47 |
| Msa0683960 | Msa0827870 | 0.823854 | 1.107093e-53 | -8.615850e-47 |
| Msa0683960 | Msa0859290 | 0.818515 | 1.882784e-52 | -8.615850e-47 |
| Msa0683960 | Msa1042160 | 0.808149 | 3.569296e-50 | -8.615850e-47 |
| Msa0683960 | Msa1042190 | 0.814827 | 1.263458e-51 | -8.615850e-47 |
| Msa0683960 | Msa1072940 | 0.817166 | 3.796274e-52 | -8.615850e-47 |
| Msa0683960 | Msa1160920 | 0.815988 | 6.970960e-52 | -8.615850e-47 |
| Msa0683960 | Msa1167470 | 0.808516 | 2.980525e-50 | -8.615850e-47 |
| Msa0683960 | Msa1170890 | 0.803154 | 3.991045e-49 | -8.615850e-47 |
| Msa0683960 | Msa1341840 | 0.822496 | 2.296207e-53 | -8.615850e-47 |
| Msa0683960 | Msa1405460 | 0.831340 | 1.764281e-55 | -8.615850e-47 |
| Msa0683960 | Msa1415540 | 0.824979 | 6.017437e-54 | -8.615850e-47 |
| Msa0683960 | Msa1445050 | 0.824400 | 8.240089e-54 | -8.615850e-47 |
| Msa0683960 | Msa1452140 | 0.804071 | 2.575812e-49 | -8.615850e-47 |
| Msa0683960 | Msa1459360 | 0.864046 | 1.611837e-64 | -8.615850e-47 |
| Msa0683960 | Msa1461370 | 0.809932 | 1.481892e-50 | -8.615850e-47 |
| Msa0125360 | Msa0683960 | 0.832042 | 1.184430e-55 | -8.615850e-47 |
| Msa0174450 | Msa0683960 | 0.824162 | 9.369808e-54 | -8.615850e-47 |
| Msa0193850 | Msa0683960 | 0.817100 | 3.928562e-52 | -8.615850e-47 |
| Msa0235710 | Msa0683960 | 0.802099 | 6.587180e-49 | -8.615850e-47 |
| Msa0389460 | Msa0683960 | 0.812629 | 3.850912e-51 | -8.615850e-47 |
| Msa0389500 | Msa0683960 | 0.818831 | 1.596201e-52 | -8.615850e-47 |
| Msa0392380 | Msa0683960 | 0.831178 | 1.933579e-55 | -8.615850e-47 |
| Msa0415610 | Msa0683960 | 0.815002 | 1.155512e-51 | -8.615850e-47 |
| Msa0440320 | Msa0683960 | 0.828408 | 9.142529e-55 | -8.615850e-47 |
| Msa0457770 | Msa0683960 | 0.803659 | 3.136951e-49 | -8.615850e-47 |
| Msa0307270 | Msa0683960 | 0.813463 | 2.526888e-51 | -8.615850e-47 |
| Msa0307670 | Msa0683960 | 0.802561 | 5.292778e-49 | -8.615850e-47 |
| Msa0314170 | Msa0683960 | 0.821309 | 4.325144e-53 | -8.615850e-47 |
| Msa0487500 | Msa0683960 | 0.810656 | 1.034043e-50 | -8.615850e-47 |
| Msa0528570 | Msa0683960 | 0.830674 | 2.570359e-55 | -8.615850e-47 |
| Msa0529030 | Msa0683960 | 0.832296 | 1.025248e-55 | -8.615850e-47 |
| Msa0548100 | Msa0683960 | 0.800521 | 1.386056e-48 | -8.615850e-47 |
| Msa0550050 | Msa0683960 | 0.807597 | 4.677791e-50 | -8.615850e-47 |
| Msa0557460 | Msa0683960 | 0.815856 | 7.459315e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683960 | MtrunA17_Chr4g0031131 | 99.422 | 346 | 1 | 1 | 1 | 346 | 1 | 345 | 0.0 | 708 |
| Msa0683960 | MtrunA17_Chr2g0327981 | 90.000 | 350 | 30 | 1 | 1 | 345 | 1 | 350 | 0.0 | 655 |
| Msa0683960 | MtrunA17_Chr1g0195521 | 69.069 | 333 | 86 | 2 | 30 | 346 | 115 | 446 | 1.40e-165 | 469 |
| Msa0683960 | MtrunA17_Chr4g0067461 | 72.964 | 307 | 77 | 2 | 34 | 340 | 112 | 412 | 1.90e-165 | 468 |
| Msa0683960 | MtrunA17_Chr1g0182091 | 73.516 | 219 | 58 | 0 | 122 | 340 | 4 | 222 | 4.85e-117 | 338 |
| Msa0683960 | MtrunA17_Chr1g0182071 | 68.539 | 89 | 27 | 1 | 33 | 121 | 112 | 199 | 1.95e-38 | 136 |
| Msa0683960 | MtrunA17_Chr1g0208111 | 29.060 | 351 | 191 | 13 | 33 | 329 | 19 | 365 | 7.41e-28 | 112 |
| Msa0683960 | MtrunA17_Chr4g0027491 | 27.954 | 347 | 200 | 12 | 33 | 329 | 19 | 365 | 1.65e-27 | 111 |
| Msa0683960 | MtrunA17_Chr2g0314601 | 28.939 | 311 | 198 | 10 | 35 | 329 | 9 | 312 | 8.35e-27 | 111 |
| Msa0683960 | MtrunA17_Chr7g0274131 | 28.025 | 314 | 200 | 10 | 33 | 331 | 29 | 331 | 9.15e-27 | 108 |
| Msa0683960 | MtrunA17_Chr8g0359401 | 28.296 | 311 | 200 | 10 | 35 | 329 | 9 | 312 | 3.17e-26 | 109 |
| Msa0683960 | MtrunA17_Chr1g0190771 | 27.832 | 309 | 208 | 9 | 33 | 331 | 28 | 331 | 5.72e-25 | 103 |
| Msa0683960 | MtrunA17_Chr1g0147841 | 27.273 | 319 | 209 | 10 | 35 | 337 | 7 | 318 | 1.60e-24 | 104 |
| Msa0683960 | MtrunA17_Chr1g0208571 | 26.946 | 334 | 202 | 11 | 33 | 329 | 19 | 347 | 1.92e-24 | 102 |
| Msa0683960 | MtrunA17_Chr5g0398811 | 27.273 | 330 | 202 | 12 | 31 | 329 | 88 | 410 | 1.53e-21 | 95.1 |
| Msa0683960 | MtrunA17_Chr4g0073351 | 26.807 | 332 | 203 | 13 | 30 | 329 | 92 | 415 | 1.97e-19 | 89.0 |
| Msa0683960 | MtrunA17_Chr3g0121661 | 25.460 | 326 | 205 | 11 | 35 | 329 | 101 | 419 | 5.44e-19 | 87.8 |
| Msa0683960 | MtrunA17_Chr8g0380921 | 25.501 | 349 | 220 | 11 | 15 | 329 | 53 | 395 | 1.46e-18 | 86.3 |
| Msa0683960 | MtrunA17_Chr4g0056941 | 26.048 | 334 | 201 | 13 | 31 | 329 | 91 | 413 | 5.60e-18 | 84.7 |
| Msa0683960 | MtrunA17_Chr7g0230291 | 25.893 | 336 | 201 | 14 | 30 | 329 | 79 | 402 | 1.18e-17 | 83.6 |
| Msa0683960 | MtrunA17_Chr2g0293521 | 24.638 | 345 | 207 | 13 | 15 | 319 | 53 | 384 | 1.18e-17 | 83.6 |
| Msa0683960 | MtrunA17_Chr8g0388261 | 28.182 | 330 | 199 | 13 | 31 | 327 | 2 | 326 | 1.52e-17 | 82.4 |
| Msa0683960 | MtrunA17_Chr4g0011281 | 24.471 | 331 | 212 | 11 | 30 | 329 | 98 | 421 | 3.96e-17 | 82.0 |
| Msa0683960 | MtrunA17_Chr4g0076751 | 27.434 | 339 | 198 | 17 | 29 | 327 | 19 | 349 | 3.48e-15 | 75.9 |
| Msa0683960 | MtrunA17_Chr8g0386331 | 25.000 | 332 | 209 | 14 | 31 | 327 | 4 | 330 | 6.96e-14 | 72.0 |
| Msa0683960 | MtrunA17_Chr5g0396581 | 25.893 | 336 | 209 | 13 | 26 | 327 | 40 | 369 | 2.02e-12 | 67.8 |
| Msa0683960 | MtrunA17_Chr2g0300401 | 27.778 | 216 | 133 | 7 | 33 | 232 | 19 | 227 | 2.04e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683960 | AT3G46440.2 | 89.971 | 339 | 34 | 0 | 6 | 344 | 2 | 340 | 0.0 | 626 |
| Msa0683960 | AT3G46440.1 | 89.971 | 339 | 34 | 0 | 6 | 344 | 2 | 340 | 0.0 | 626 |
| Msa0683960 | AT2G28760.4 | 88.696 | 345 | 37 | 1 | 1 | 345 | 32 | 374 | 0.0 | 625 |
| Msa0683960 | AT2G28760.1 | 88.696 | 345 | 37 | 1 | 1 | 345 | 1 | 343 | 0.0 | 624 |
| Msa0683960 | AT2G28760.2 | 88.696 | 345 | 37 | 1 | 1 | 345 | 1 | 343 | 0.0 | 624 |
| Msa0683960 | AT2G28760.3 | 88.696 | 345 | 37 | 1 | 1 | 345 | 1 | 343 | 0.0 | 624 |
| Msa0683960 | AT5G59290.2 | 87.647 | 340 | 42 | 0 | 5 | 344 | 17 | 356 | 0.0 | 619 |
| Msa0683960 | AT5G59290.1 | 87.647 | 340 | 42 | 0 | 5 | 344 | 2 | 341 | 0.0 | 617 |
| Msa0683960 | AT5G59290.3 | 91.054 | 313 | 28 | 0 | 32 | 344 | 22 | 334 | 0.0 | 603 |
| Msa0683960 | AT5G59290.4 | 91.026 | 312 | 28 | 0 | 33 | 344 | 1 | 312 | 0.0 | 601 |
| Msa0683960 | AT2G47650.1 | 72.611 | 314 | 85 | 1 | 33 | 346 | 121 | 433 | 3.48e-169 | 478 |
| Msa0683960 | AT3G62830.2 | 71.924 | 317 | 88 | 1 | 30 | 346 | 116 | 431 | 1.50e-168 | 477 |
| Msa0683960 | AT3G62830.1 | 71.924 | 317 | 88 | 1 | 30 | 346 | 116 | 431 | 1.50e-168 | 477 |
| Msa0683960 | AT2G47650.2 | 71.250 | 320 | 85 | 2 | 33 | 346 | 121 | 439 | 2.29e-166 | 472 |
| Msa0683960 | AT3G53520.1 | 71.061 | 311 | 89 | 1 | 30 | 340 | 117 | 426 | 1.17e-164 | 467 |
| Msa0683960 | AT3G53520.2 | 70.740 | 311 | 88 | 2 | 30 | 340 | 117 | 424 | 6.23e-162 | 460 |
| Msa0683960 | AT3G53520.4 | 64.583 | 336 | 91 | 3 | 30 | 340 | 117 | 449 | 4.58e-154 | 441 |
| Msa0683960 | AT3G53520.3 | 74.775 | 222 | 55 | 1 | 30 | 251 | 117 | 337 | 5.63e-121 | 353 |
| Msa0683960 | AT1G08200.1 | 29.107 | 347 | 196 | 12 | 33 | 329 | 18 | 364 | 3.57e-30 | 119 |
| Msa0683960 | AT2G27860.1 | 28.818 | 347 | 197 | 12 | 33 | 329 | 18 | 364 | 3.49e-29 | 116 |
| Msa0683960 | AT1G78570.1 | 28.754 | 313 | 196 | 10 | 35 | 329 | 9 | 312 | 2.44e-26 | 110 |
| Msa0683960 | AT3G14790.2 | 28.435 | 313 | 197 | 10 | 35 | 329 | 12 | 315 | 8.19e-26 | 108 |
| Msa0683960 | AT3G14790.1 | 28.435 | 313 | 197 | 10 | 35 | 329 | 9 | 312 | 8.24e-26 | 108 |
| Msa0683960 | AT1G53500.1 | 27.476 | 313 | 200 | 10 | 35 | 329 | 11 | 314 | 1.75e-25 | 107 |
| Msa0683960 | AT5G28840.2 | 28.065 | 310 | 208 | 9 | 32 | 331 | 27 | 331 | 3.58e-25 | 105 |
| Msa0683960 | AT5G28840.1 | 28.065 | 310 | 208 | 9 | 32 | 331 | 27 | 331 | 3.58e-25 | 105 |
| Msa0683960 | AT2G28755.1 | 70.175 | 57 | 17 | 0 | 249 | 305 | 4 | 60 | 6.31e-22 | 88.2 |
| Msa0683960 | AT4G20460.1 | 24.496 | 347 | 222 | 10 | 17 | 329 | 54 | 394 | 6.61e-19 | 87.4 |
| Msa0683960 | AT2G45310.1 | 25.071 | 351 | 217 | 12 | 14 | 329 | 78 | 417 | 9.49e-19 | 87.4 |
| Msa0683960 | AT5G44480.3 | 24.556 | 338 | 202 | 11 | 25 | 322 | 63 | 387 | 3.35e-18 | 85.5 |
| Msa0683960 | AT5G44480.4 | 24.556 | 338 | 202 | 11 | 25 | 322 | 63 | 387 | 3.35e-18 | 85.5 |
| Msa0683960 | AT5G44480.2 | 24.556 | 338 | 202 | 11 | 25 | 322 | 63 | 387 | 3.35e-18 | 85.5 |
| Msa0683960 | AT5G44480.1 | 24.556 | 338 | 202 | 11 | 25 | 322 | 87 | 411 | 3.86e-18 | 85.5 |
| Msa0683960 | AT3G23820.1 | 25.210 | 357 | 204 | 13 | 10 | 329 | 102 | 432 | 5.35e-17 | 82.0 |
| Msa0683960 | AT4G00110.1 | 24.545 | 330 | 203 | 12 | 35 | 329 | 93 | 411 | 1.27e-16 | 80.9 |
| Msa0683960 | AT1G30620.1 | 25.143 | 350 | 220 | 11 | 15 | 329 | 53 | 395 | 1.56e-16 | 80.5 |
| Msa0683960 | AT1G30620.6 | 25.143 | 350 | 220 | 11 | 15 | 329 | 53 | 395 | 1.56e-16 | 80.5 |
| Msa0683960 | AT1G30620.4 | 25.143 | 350 | 220 | 11 | 15 | 329 | 53 | 395 | 1.56e-16 | 80.5 |
| Msa0683960 | AT1G30620.2 | 25.143 | 350 | 220 | 11 | 15 | 329 | 53 | 395 | 1.56e-16 | 80.5 |
| Msa0683960 | AT1G02000.1 | 23.881 | 335 | 209 | 12 | 30 | 329 | 89 | 412 | 1.93e-16 | 80.5 |
| Msa0683960 | AT1G30620.3 | 25.429 | 350 | 219 | 11 | 15 | 329 | 52 | 394 | 2.77e-16 | 79.7 |
| Msa0683960 | AT4G12250.1 | 25.602 | 332 | 207 | 13 | 30 | 329 | 93 | 416 | 6.02e-16 | 79.0 |
| Msa0683960 | AT4G23920.1 | 27.607 | 326 | 198 | 12 | 35 | 327 | 5 | 325 | 1.17e-15 | 77.4 |
| Msa0683960 | AT4G30440.1 | 23.780 | 328 | 212 | 10 | 33 | 329 | 88 | 408 | 6.38e-14 | 72.8 |
| Msa0683960 | AT1G73250.1 | 24.684 | 316 | 210 | 7 | 26 | 329 | 10 | 309 | 1.25e-13 | 71.2 |
| Msa0683960 | AT4G10960.1 | 26.380 | 326 | 202 | 12 | 35 | 327 | 6 | 326 | 2.34e-13 | 70.9 |
| Msa0683960 | AT1G64440.1 | 26.426 | 333 | 193 | 13 | 35 | 327 | 5 | 325 | 1.99e-11 | 64.7 |
| Msa0683960 | AT1G17890.2 | 23.899 | 318 | 210 | 9 | 26 | 329 | 5 | 304 | 2.73e-11 | 64.3 |
| Msa0683960 | AT1G17890.3 | 23.899 | 318 | 210 | 9 | 26 | 329 | 5 | 304 | 2.73e-11 | 64.3 |
| Msa0683960 | AT1G17890.1 | 23.899 | 318 | 210 | 9 | 26 | 329 | 13 | 312 | 3.41e-11 | 63.9 |
Find 133 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGTTTCTCCAAGTTCTTTC+AGG | 0.199352 | 4_4:-47037332 | Msa0683960:intron |
| TACTTTACTATACATGATTA+TGG | 0.231883 | 4_4:-47033699 | Msa0683960:three_prime_UTR |
| CTCTTGGAAGCTAAAATTTC+AGG | 0.233645 | 4_4:+47033657 | None:intergenic |
| ACATTGCCCCAATAGCTTTC+AGG | 0.235265 | 4_4:+47035189 | None:intergenic |
| ATAAATCCACCAGCAAAATT+TGG | 0.246270 | 4_4:+47033584 | None:intergenic |
| TCTTTACAACTTTCTTTATA+TGG | 0.250299 | 4_4:-47033518 | Msa0683960:three_prime_UTR |
| CACAAGAGTTGTTAGGGTTT+TGG | 0.263290 | 4_4:-47037565 | Msa0683960:five_prime_UTR |
| AAACTGCGAGTTTGCGTTCC+TGG | 0.265729 | 4_4:+47034499 | None:intergenic |
| ACTCTTCTCATTTGTTGCTT+TGG | 0.271974 | 4_4:-47037793 | Msa0683960:five_prime_UTR |
| TCACTGTATGACATTTATAA+TGG | 0.275203 | 4_4:-47033487 | Msa0683960:three_prime_UTR |
| TCCTCAACCTGAAAGCTATT+GGG | 0.285495 | 4_4:-47035196 | Msa0683960:CDS |
| TCCTTTGCTTTGGTTATGTC+TGG | 0.301398 | 4_4:+47033892 | None:intergenic |
| GGATTATATTTGTAGAAAAT+AGG | 0.307972 | 4_4:+47035637 | None:intergenic |
| TTTAATGTCCCTTAGGTTGA+TGG | 0.310321 | 4_4:-47034372 | Msa0683960:intron |
| TTTAGATCACAAGAGTTGTT+AGG | 0.311359 | 4_4:-47037572 | Msa0683960:five_prime_UTR |
| ACATCAACTTCAGAGGTATA+TGG | 0.326566 | 4_4:-47035234 | Msa0683960:CDS |
| ACTATCTTTATCTCCACATT+TGG | 0.333705 | 4_4:+47033949 | None:intergenic |
| ACTGGAGGAGCTGGTTTCAT+TGG | 0.339846 | 4_4:-47036341 | Msa0683960:CDS |
| TTTAATATATTGTTGCATAG+TGG | 0.348969 | 4_4:+47033406 | None:intergenic |
| CCTGGGTTGCCAAGATTGAT+TGG | 0.357256 | 4_4:+47034315 | None:intergenic |
| GCAAGAATCTTCAACACATA+TGG | 0.358114 | 4_4:-47034713 | Msa0683960:CDS |
| TTTCTCTGTCTTGGATCATC+AGG | 0.361145 | 4_4:+47033916 | None:intergenic |
| TGGGGCAATGTTAACCCTAT+TGG | 0.365765 | 4_4:-47035177 | Msa0683960:intron |
| AACATGAGAATCTTGGTTAC+TGG | 0.366684 | 4_4:-47036359 | Msa0683960:CDS |
| GCCAAGCAATTCCTTTGCTT+TGG | 0.366826 | 4_4:+47033882 | None:intergenic |
| ATCCTCAACCTGAAAGCTAT+TGG | 0.367484 | 4_4:-47035197 | Msa0683960:CDS |
| CTTTGATGTTTGATTATCAT+AGG | 0.378515 | 4_4:-47034870 | Msa0683960:CDS |
| TCACCTTGTCGATAGATTGA+TGG | 0.379182 | 4_4:-47036315 | Msa0683960:CDS |
| CCTTCACTCAGCTTGACCTT+TGG | 0.382651 | 4_4:+47033853 | None:intergenic |
| CATCAACTTCAGAGGTATAT+GGG | 0.387261 | 4_4:-47035233 | Msa0683960:CDS |
| CCCCAATAGCTTTCAGGTTG+AGG | 0.390949 | 4_4:+47035195 | None:intergenic |
| TTCAGGTGAATTCACGATGA+TGG | 0.402808 | 4_4:-47034214 | Msa0683960:intron |
| ATGCAGGAATTGAAATTCTC+AGG | 0.404303 | 4_4:-47037431 | Msa0683960:intron |
| GTTGCTGATAACTTCTTCAC+TGG | 0.405680 | 4_4:-47036106 | Msa0683960:CDS |
| TTATTAATTTAATTAGCGTT+TGG | 0.405769 | 4_4:-47037646 | Msa0683960:five_prime_UTR |
| GGAGATTTCCGTTTGAGGCT+TGG | 0.416400 | 4_4:-47033814 | Msa0683960:CDS |
| ATCTTGGTTACTGGAGGAGC+TGG | 0.420013 | 4_4:-47036350 | Msa0683960:CDS |
| TAGTTAGGTAGAATTTGTTA+TGG | 0.422569 | 4_4:-47037868 | None:intergenic |
| ATTATGGTACTGGAGAAGTT+GGG | 0.423099 | 4_4:-47033683 | Msa0683960:three_prime_UTR |
| TTGAGTTACCTGAAAGAACT+TGG | 0.424273 | 4_4:+47037324 | None:intergenic |
| TTGGCACTCTGAACATGCTT+GGG | 0.428559 | 4_4:-47035391 | Msa0683960:CDS |
| TATCATAGGCAACATGGAAT+AGG | 0.430209 | 4_4:-47034856 | Msa0683960:intron |
| AAGCAAAGGAATTGCTTGGC+TGG | 0.433406 | 4_4:-47033879 | Msa0683960:CDS |
| TCTCAGGTCTTTGCAATGGC+AGG | 0.439340 | 4_4:-47037415 | Msa0683960:exon |
| ACTATACATGATTATGGTAC+TGG | 0.440258 | 4_4:-47033693 | Msa0683960:three_prime_UTR |
| ATTGGCACTCTGAACATGCT+TGG | 0.441893 | 4_4:-47035392 | Msa0683960:CDS |
| GATTATGGTACTGGAGAAGT+TGG | 0.443810 | 4_4:-47033684 | Msa0683960:three_prime_UTR |
| TGACGGATAAGTTCAAATCT+TGG | 0.447891 | 4_4:+47036049 | None:intergenic |
| TCTTCTCTAAACTCTCGATC+AGG | 0.450279 | 4_4:-47037530 | Msa0683960:intron |
| AGGAGGCTGCTTAGCTGTTG+TGG | 0.458824 | 4_4:+47037369 | None:intergenic |
| GATAAAAGAACGTACCAATA+GGG | 0.459006 | 4_4:+47035163 | None:intergenic |
| GAGTTTGCGTTCCTGGCGCT+TGG | 0.464935 | 4_4:+47034506 | None:intergenic |
| GACACTGGTCCAATCAATCT+TGG | 0.466228 | 4_4:-47034324 | Msa0683960:CDS |
| TGGAAGGAGATTTCCGTTTG+AGG | 0.468564 | 4_4:-47033819 | Msa0683960:CDS |
| TTAATATATTGTTGCATAGT+GGG | 0.470417 | 4_4:+47033407 | None:intergenic |
| TCTTGTCAATAGAAAATAAG+TGG | 0.471089 | 4_4:-47033751 | Msa0683960:three_prime_UTR |
| TTAATTTAATTAGCGTTTGG+TGG | 0.471473 | 4_4:-47037643 | Msa0683960:five_prime_UTR |
| ATAGTCTAACATGAGAATCT+TGG | 0.477476 | 4_4:-47036366 | Msa0683960:intron |
| TTAGATCACAAGAGTTGTTA+GGG | 0.477796 | 4_4:-47037571 | Msa0683960:five_prime_UTR |
| TCCTTGACTGTCCAAGCGCC+AGG | 0.479424 | 4_4:-47034517 | Msa0683960:CDS |
| TTGTAGAAAATAGGAGATGC+GGG | 0.480312 | 4_4:+47035646 | None:intergenic |
| CTTGGGCTTGCAAAGAGAGT+TGG | 0.480768 | 4_4:-47035374 | Msa0683960:CDS |
| CGCAGGGGAGATGGCAAAGG+AGG | 0.489358 | 4_4:+47037352 | None:intergenic |
| GAGTGAAGGTCTTCCTCTCA+TGG | 0.489967 | 4_4:-47033839 | Msa0683960:CDS |
| TGATGGCCTTATCCGTCTCA+TGG | 0.493071 | 4_4:-47034355 | Msa0683960:CDS |
| AGACATTATCGTACCTTCAC+AGG | 0.493250 | 4_4:+47035616 | None:intergenic |
| ACAATAAAGACAAATGTGAT+TGG | 0.494499 | 4_4:-47035410 | Msa0683960:CDS |
| TAGCAAATCTCTGATACTCT+TGG | 0.494976 | 4_4:+47033641 | None:intergenic |
| AGCAAAGGAATTGCTTGGCT+GGG | 0.500005 | 4_4:-47033878 | Msa0683960:CDS |
| ATCCTCCCATGAGACGGATA+AGG | 0.500920 | 4_4:+47034349 | None:intergenic |
| AAACGCAGGGGAGATGGCAA+AGG | 0.502480 | 4_4:+47037349 | None:intergenic |
| AAATGTGGAGATAAAGATAG+TGG | 0.505212 | 4_4:-47033947 | Msa0683960:CDS |
| ATGGCAGGGAATTCTTCTAA+TGG | 0.507450 | 4_4:-47037400 | Msa0683960:CDS |
| TGTCAACTCCAAGCCTCAAA+CGG | 0.507833 | 4_4:+47033806 | None:intergenic |
| TTGGAGAAACGCAGGGGAGA+TGG | 0.512183 | 4_4:+47037343 | None:intergenic |
| TGTAAAGAGAAACATACAGC+AGG | 0.513196 | 4_4:+47033533 | None:intergenic |
| CAAGAATCTTCAACACATAT+GGG | 0.513301 | 4_4:-47034712 | Msa0683960:CDS |
| TGAAAGTCACGTAAAGTTGA+AGG | 0.531913 | 4_4:+47037756 | None:intergenic |
| AATTTATATATAGTCAGAAA+AGG | 0.533596 | 4_4:+47037612 | None:intergenic |
| CCTCGCATGAATATCGATGA+TGG | 0.536367 | 4_4:-47034689 | Msa0683960:CDS |
| TCCTGGCGCTTGGACAGTCA+AGG | 0.536722 | 4_4:+47034516 | None:intergenic |
| TATATTGTTGCATAGTGGGA+AGG | 0.538085 | 4_4:+47033411 | None:intergenic |
| ACCAAAGCAAAGGAATTGCT+TGG | 0.538585 | 4_4:-47033883 | Msa0683960:CDS |
| CACTGAGACTTTGATGATTG+AGG | 0.539187 | 4_4:-47035695 | Msa0683960:CDS |
| CTCAGGTCTTTGCAATGGCA+GGG | 0.544540 | 4_4:-47037414 | Msa0683960:exon |
| TCAATAGAAAATAAGTGGGA+TGG | 0.546084 | 4_4:-47033746 | Msa0683960:three_prime_UTR |
| ATAATCAAACATCAAAGTCT+CGG | 0.547377 | 4_4:+47034876 | None:intergenic |
| TCAGGTTGAGGATGCTCAAG+AGG | 0.557605 | 4_4:+47035207 | None:intergenic |
| AGATTTGAACTTATCCGTCA+TGG | 0.559399 | 4_4:-47036046 | Msa0683960:intron |
| GATGGAAAATGAAAAGAATG+AGG | 0.564416 | 4_4:-47036297 | Msa0683960:intron |
| CCTCAACCTGAAAGCTATTG+GGG | 0.567825 | 4_4:-47035195 | Msa0683960:CDS |
| CGGAAATCTCCTTCCATGAG+AGG | 0.568379 | 4_4:+47033826 | None:intergenic |
| GATGGCCTTATCCGTCTCAT+GGG | 0.568978 | 4_4:-47034354 | Msa0683960:CDS |
| TATATAAATTGCTCTGATCA+CGG | 0.572202 | 4_4:-47037599 | Msa0683960:five_prime_UTR |
| AAATTCTCAGGTCTTTGCAA+TGG | 0.575634 | 4_4:-47037419 | Msa0683960:exon |
| GCAACAAATGAGAAGAGTGA+TGG | 0.580738 | 4_4:+47037798 | None:intergenic |
| GAAAGAACTTGGAGAAACGC+AGG | 0.583091 | 4_4:+47037335 | None:intergenic |
| TTTGCTTACATCAACTTCAG+AGG | 0.585158 | 4_4:-47035241 | Msa0683960:CDS |
| CTTGTCAATAGAAAATAAGT+GGG | 0.585856 | 4_4:-47033750 | Msa0683960:three_prime_UTR |
| CTACAAATATAATCCTGTGA+AGG | 0.587182 | 4_4:-47035629 | Msa0683960:intron |
| GAAGGTCTTCCTCTCATGGA+AGG | 0.592285 | 4_4:-47033835 | Msa0683960:CDS |
| GTTCGTAGCTGCTATGACGA+GGG | 0.592450 | 4_4:-47034910 | Msa0683960:CDS |
| GCAGCTTATTAATCCAAATG+TGG | 0.592641 | 4_4:-47033962 | Msa0683960:intron |
| GGCCTTATCCGTCTCATGGG+AGG | 0.595699 | 4_4:-47034351 | Msa0683960:CDS |
| TAACTTCTTCACTGGATCGA+AGG | 0.596587 | 4_4:-47036098 | Msa0683960:CDS |
| ATTGCTTGGCTGGGAACCAA+AGG | 0.597155 | 4_4:-47033869 | Msa0683960:CDS |
| TTTGATTATCATAGGCAACA+TGG | 0.598463 | 4_4:-47034862 | Msa0683960:CDS |
| GAGATGCGGGGCATGCGAGA+TGG | 0.598472 | 4_4:+47035659 | None:intergenic |
| CCAATCAATCTTGGCAACCC+AGG | 0.598660 | 4_4:-47034315 | Msa0683960:intron |
| CCAAAGGTCAAGCTGAGTGA+AGG | 0.601047 | 4_4:-47033853 | Msa0683960:CDS |
| TTATGGTACTGGAGAAGTTG+GGG | 0.601340 | 4_4:-47033682 | Msa0683960:three_prime_UTR |
| ACCAGACATAACCAAAGCAA+AGG | 0.602664 | 4_4:-47033893 | Msa0683960:CDS |
| TTTGTAGAAAATAGGAGATG+CGG | 0.604591 | 4_4:+47035645 | None:intergenic |
| AGTTCGTAGCTGCTATGACG+AGG | 0.615229 | 4_4:-47034911 | Msa0683960:CDS |
| TTGCAAAGAGAGTTGGAGCA+AGG | 0.617224 | 4_4:-47035367 | Msa0683960:intron |
| TTTCTGCTATGTCTCTGACC+TGG | 0.618172 | 4_4:-47034479 | Msa0683960:intron |
| AAAGAACTTGGAGAAACGCA+GGG | 0.625919 | 4_4:+47037336 | None:intergenic |
| GTAAAGAGAAACATACAGCA+GGG | 0.626738 | 4_4:+47033534 | None:intergenic |
| TGTCTGATCCTCCCATGAGA+CGG | 0.626861 | 4_4:+47034343 | None:intergenic |
| ATCAACTTCAGAGGTATATG+GGG | 0.630585 | 4_4:-47035232 | Msa0683960:CDS |
| TGAGACTTTGATGATTGAGG+TGG | 0.635484 | 4_4:-47035692 | Msa0683960:CDS |
| ATGAGAATCTTGGTTACTGG+AGG | 0.635776 | 4_4:-47036356 | Msa0683960:CDS |
| ACTTGCTGAGACAGTGAAGG+AGG | 0.645692 | 4_4:-47034190 | Msa0683960:intron |
| TTCGTAGCTGCTATGACGAG+GGG | 0.651810 | 4_4:-47034909 | Msa0683960:CDS |
| CTCATGGGAGGATCAGACAC+TGG | 0.654323 | 4_4:-47034339 | Msa0683960:CDS |
| TTTCCATCAATCTATCGACA+AGG | 0.663439 | 4_4:+47036312 | None:intergenic |
| CTATGACGAGGGGAAACGTG+TGG | 0.668216 | 4_4:-47034899 | Msa0683960:CDS |
| TAAAGAGAAACATACAGCAG+GGG | 0.669324 | 4_4:+47033535 | None:intergenic |
| CCATCATCGATATTCATGCG+AGG | 0.684477 | 4_4:+47034689 | None:intergenic |
| GGAACTTGCTGAGACAGTGA+AGG | 0.698005 | 4_4:-47034193 | Msa0683960:CDS |
| TGTAGAAAATAGGAGATGCG+GGG | 0.699354 | 4_4:+47035647 | None:intergenic |
| AAGAACTTGGAGAAACGCAG+GGG | 0.748466 | 4_4:+47037337 | None:intergenic |
| ACTTCATTGCTCAAGCACTG+CGG | 0.763614 | 4_4:-47034652 | Msa0683960:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTATTTTAATTTAATT+TGG | + | chr4_4:47033533-47033552 | None:intergenic | 0.0% |
| !!! | TTATTTTAATTTAATTTGGA+AGG | + | chr4_4:47033529-47033548 | None:intergenic | 10.0% |
| !!! | TATCTATTTTATCAAATTTA+GGG | + | chr4_4:47035073-47035092 | None:intergenic | 10.0% |
| !! | AAAAATATAACAATTCAAAA+AGG | + | chr4_4:47036995-47037014 | None:intergenic | 10.0% |
| !! | TTATTAATTTAATTAGCGTT+TGG | - | chr4_4:47033611-47033630 | Msa0683960:three_prime_UTR | 15.0% |
| !! | AATTTATATATAGTCAGAAA+AGG | + | chr4_4:47033648-47033667 | None:intergenic | 15.0% |
| !!! | GTATCTATTTTATCAAATTT+AGG | + | chr4_4:47035074-47035093 | None:intergenic | 15.0% |
| !!! | TTTATTTATTTTGTTCCATT+TGG | - | chr4_4:47035307-47035326 | Msa0683960:intron | 15.0% |
| !!! | TTTGTAGGATTTTAAATTAA+GGG | + | chr4_4:47035376-47035395 | None:intergenic | 15.0% |
| !!! | TTTTGTAGGATTTTAAATTA+AGG | + | chr4_4:47035377-47035396 | None:intergenic | 15.0% |
| !! | GTAAACATATTAAATAAGAA+AGG | + | chr4_4:47036210-47036229 | None:intergenic | 15.0% |
| !! | TGTATAGTAAAGTAAAAAAT+CGG | + | chr4_4:47037552-47037571 | None:intergenic | 15.0% |
| !! | TTAGAGAATTAAGAAAAAGA+AGG | + | chr4_4:47033573-47033592 | None:intergenic | 20.0% |
| !!! | GATTTTTCTGATTGTTATTA+TGG | - | chr4_4:47033782-47033801 | Msa0683960:exon | 20.0% |
| !! | ACAAAATAACTAAAGTAACA+CGG | + | chr4_4:47034041-47034060 | None:intergenic | 20.0% |
| !! | ATAATTGAGAAAAGATCATA+TGG | - | chr4_4:47034434-47034453 | Msa0683960:intron | 20.0% |
| !!! | TGTTTTTAGATTAGCTAAAT+GGG | + | chr4_4:47034506-47034525 | None:intergenic | 20.0% |
| !! | TTATTACATGATTATGAATG+AGG | - | chr4_4:47034783-47034802 | Msa0683960:intron | 20.0% |
| !!! | TCTGCATAACATTTTTTTTT+TGG | - | chr4_4:47034826-47034845 | Msa0683960:intron | 20.0% |
| !! | AACAAAATGTTAGTTAAACA+AGG | + | chr4_4:47034860-47034879 | None:intergenic | 20.0% |
| !! | TAAAGATAGTTGAATTGAAA+AGG | + | chr4_4:47035248-47035267 | None:intergenic | 20.0% |
| !! | GGATTATATTTGTAGAAAAT+AGG | + | chr4_4:47035623-47035642 | None:intergenic | 20.0% |
| !! | TTAATTCTTATTCTATTGAC+AGG | - | chr4_4:47035991-47036010 | Msa0683960:intron | 20.0% |
| !!! | ATCTTTAAAAATCATAGCAA+CGG | + | chr4_4:47036162-47036181 | None:intergenic | 20.0% |
| !!! | AACTTAATTTTGTTCATAAC+AGG | - | chr4_4:47036323-47036342 | Msa0683960:CDS | 20.0% |
| !! | AGAAAAAAACAAAGATTGAA+CGG | + | chr4_4:47036813-47036832 | None:intergenic | 20.0% |
| !! | AAACTTACTGATGTTAAATA+TGG | - | chr4_4:47037132-47037151 | Msa0683960:intron | 20.0% |
| !!! | TGTTATCTGAAACTAAAATT+GGG | - | chr4_4:47037240-47037259 | Msa0683960:intron | 20.0% |
| !! | TACTTTACTATACATGATTA+TGG | - | chr4_4:47037558-47037577 | Msa0683960:five_prime_UTR | 20.0% |
| !! | TCTTTACAACTTTCTTTATA+TGG | - | chr4_4:47037739-47037758 | Msa0683960:five_prime_UTR | 20.0% |
| !! | TTAATATATTGTTGCATAGT+GGG | + | chr4_4:47037853-47037872 | None:intergenic | 20.0% |
| !! | TTTAATATATTGTTGCATAG+TGG | + | chr4_4:47037854-47037873 | None:intergenic | 20.0% |
| ! | TTAATTTAATTAGCGTTTGG+TGG | - | chr4_4:47033614-47033633 | Msa0683960:three_prime_UTR | 25.0% |
| ! | TATATAAATTGCTCTGATCA+CGG | - | chr4_4:47033658-47033677 | Msa0683960:three_prime_UTR | 25.0% |
| ! | TACGAAACAAAAAACTACTA+CGG | + | chr4_4:47034073-47034092 | None:intergenic | 25.0% |
| ! | TATTATCAATATCTGCATGT+TGG | + | chr4_4:47034130-47034149 | None:intergenic | 25.0% |
| !! | TCTTCAATTTGAAGTTTAGT+AGG | - | chr4_4:47034211-47034230 | Msa0683960:CDS | 25.0% |
| ! | CATTCAAAGATATAACAATG+AGG | + | chr4_4:47034386-47034405 | None:intergenic | 25.0% |
| !!! | AATCTTTTTTATAAGTCCTG+AGG | - | chr4_4:47034406-47034425 | Msa0683960:intron | 25.0% |
| !!! | ATCTTTTTTATAAGTCCTGA+GGG | - | chr4_4:47034407-47034426 | Msa0683960:intron | 25.0% |
| !!! | CTGTTTTTAGATTAGCTAAA+TGG | + | chr4_4:47034507-47034526 | None:intergenic | 25.0% |
| !! | TTTAATTTCGAGGTTAGATA+AGG | + | chr4_4:47034693-47034712 | None:intergenic | 25.0% |
| !! | TCTATAGAAAGAGATTTTGT+AGG | + | chr4_4:47035391-47035410 | None:intergenic | 25.0% |
| ! | ACAATAAAGACAAATGTGAT+TGG | - | chr4_4:47035847-47035866 | Msa0683960:intron | 25.0% |
| !! | AAGGTTAGGAATTTTTCTTT+AGG | - | chr4_4:47035909-47035928 | Msa0683960:intron | 25.0% |
| ! | TTATAATTTCAGCTTCTACA+TGG | - | chr4_4:47035940-47035959 | Msa0683960:intron | 25.0% |
| !!! | CTTAGTTCTGTTTTTCTTTA+TGG | - | chr4_4:47035964-47035983 | Msa0683960:intron | 25.0% |
| ! | GGATATAATTTCATTTCAGA+AGG | + | chr4_4:47036141-47036160 | None:intergenic | 25.0% |
| ! | TTAAATAAGAAAGGTCTTCA+AGG | + | chr4_4:47036201-47036220 | None:intergenic | 25.0% |
| ! | ATAATCAAACATCAAAGTCT+CGG | + | chr4_4:47036384-47036403 | None:intergenic | 25.0% |
| ! | CTTTGATGTTTGATTATCAT+AGG | - | chr4_4:47036387-47036406 | Msa0683960:intron | 25.0% |
| !!! | AGAGCATTGATTTAGAAATA+GGG | + | chr4_4:47036664-47036683 | None:intergenic | 25.0% |
| !!! | TAGAGCATTGATTTAGAAAT+AGG | + | chr4_4:47036665-47036684 | None:intergenic | 25.0% |
| ! | GAAAAAAACAAAGATTGAAC+GGG | + | chr4_4:47036812-47036831 | None:intergenic | 25.0% |
| ! | TTCTCATTGAATTATACTAG+TGG | - | chr4_4:47036844-47036863 | Msa0683960:intron | 25.0% |
| !!! | TATGTATTTTAATGTCCCTT+AGG | - | chr4_4:47036878-47036897 | Msa0683960:intron | 25.0% |
| ! | CAATTGTAAAAATCTAACCT+GGG | + | chr4_4:47036962-47036981 | None:intergenic | 25.0% |
| ! | TCAATTGTAAAAATCTAACC+TGG | + | chr4_4:47036963-47036982 | None:intergenic | 25.0% |
| ! | GTGTAAACAAAACAATGAAA+CGG | + | chr4_4:47037106-47037125 | None:intergenic | 25.0% |
| !! | CTGTTATCTGAAACTAAAAT+TGG | - | chr4_4:47037239-47037258 | Msa0683960:intron | 25.0% |
| ! | TCTTGTCAATAGAAAATAAG+TGG | - | chr4_4:47037506-47037525 | Msa0683960:intron | 25.0% |
| ! | CTTGTCAATAGAAAATAAGT+GGG | - | chr4_4:47037507-47037526 | Msa0683960:intron | 25.0% |
| ! | TCACTGTATGACATTTATAA+TGG | - | chr4_4:47037770-47037789 | Msa0683960:five_prime_UTR | 25.0% |
| ! | TCTTTTCTATGTTCTCTGTT+TGG | - | chr4_4:47033428-47033447 | Msa0683960:three_prime_UTR | 30.0% |
| TTTAGATCACAAGAGTTGTT+AGG | - | chr4_4:47033685-47033704 | Msa0683960:three_prime_UTR | 30.0% | |
| TTAGATCACAAGAGTTGTTA+GGG | - | chr4_4:47033686-47033705 | Msa0683960:three_prime_UTR | 30.0% | |
| TCAGGTTCATTACTTGATTA+TGG | - | chr4_4:47033745-47033764 | Msa0683960:three_prime_UTR | 30.0% | |
| !! | ATCTTTCTGAAATTTGATGC+AGG | - | chr4_4:47033810-47033829 | Msa0683960:CDS | 30.0% |
| AACAAATGAGAACAACAATG+TGG | + | chr4_4:47033995-47034014 | None:intergenic | 30.0% | |
| !! | TGTTGTTCTCATTTGTTTTC+TGG | - | chr4_4:47033998-47034017 | Msa0683960:intron | 30.0% |
| !!! | TCTTTTTTATAAGTCCTGAG+GGG | - | chr4_4:47034408-47034427 | Msa0683960:intron | 30.0% |
| GAAAAGATCATATGGATGTT+TGG | - | chr4_4:47034442-47034461 | Msa0683960:intron | 30.0% | |
| TAATCTAAAAACAGATTCCC+TGG | - | chr4_4:47034513-47034532 | Msa0683960:CDS | 30.0% | |
| CTCAACCATTCATTTAGATT+GGG | + | chr4_4:47034573-47034592 | None:intergenic | 30.0% | |
| ACTCAACCATTCATTTAGAT+TGG | + | chr4_4:47034574-47034593 | None:intergenic | 30.0% | |
| !! | TTCGATCATTGATTTCAGAT+CGG | + | chr4_4:47034637-47034656 | None:intergenic | 30.0% |
| CTGAAATCAATGATCGAAAT+TGG | - | chr4_4:47034639-47034658 | Msa0683960:intron | 30.0% | |
| AGACTGAGTGATTCTTATAA+TGG | + | chr4_4:47034809-47034828 | None:intergenic | 30.0% | |
| ATAGTCTAACATGAGAATCT+TGG | - | chr4_4:47034891-47034910 | Msa0683960:CDS | 30.0% | |
| GATGGAAAATGAAAAGAATG+AGG | - | chr4_4:47034960-47034979 | Msa0683960:intron | 30.0% | |
| TAACATCAACATCTTGAATC+AGG | - | chr4_4:47035123-47035142 | Msa0683960:intron | 30.0% | |
| AGATAGTTGAATTGAAAAGG+TGG | + | chr4_4:47035245-47035264 | None:intergenic | 30.0% | |
| ACAACTTACACATAAGTGTT+TGG | + | chr4_4:47035343-47035362 | None:intergenic | 30.0% | |
| !! | AAATCACAATTTTGATCAGC+TGG | - | chr4_4:47035410-47035429 | Msa0683960:CDS | 30.0% |
| TTTGTAGAAAATAGGAGATG+CGG | + | chr4_4:47035615-47035634 | None:intergenic | 30.0% | |
| CTACAAATATAATCCTGTGA+AGG | - | chr4_4:47035628-47035647 | Msa0683960:intron | 30.0% | |
| ATGTTTACTTGCCAAGTAAA+CGG | + | chr4_4:47035686-47035705 | None:intergenic | 30.0% | |
| ACACATTAGATAATCTCTCA+AGG | + | chr4_4:47035806-47035825 | None:intergenic | 30.0% | |
| GAGAGATTATCTAATGTGTA+AGG | - | chr4_4:47035807-47035826 | Msa0683960:intron | 30.0% | |
| GATAAAAGAACGTACCAATA+GGG | + | chr4_4:47036097-47036116 | None:intergenic | 30.0% | |
| AGATAAAAGAACGTACCAAT+AGG | + | chr4_4:47036098-47036117 | None:intergenic | 30.0% | |
| ATTTCAGAAGGTCAATATAC+AGG | + | chr4_4:47036129-47036148 | None:intergenic | 30.0% | |
| CTTCAAGGTTTATTTAGTAC+AGG | + | chr4_4:47036186-47036205 | None:intergenic | 30.0% | |
| TTTGATTATCATAGGCAACA+TGG | - | chr4_4:47036395-47036414 | Msa0683960:intron | 30.0% | |
| TTACAAAGCAAAACTTCTAC+AGG | + | chr4_4:47036483-47036502 | None:intergenic | 30.0% | |
| CAAGAATCTTCAACACATAT+GGG | - | chr4_4:47036545-47036564 | Msa0683960:intron | 30.0% | |
| GAAAAGACAGTTAGTTAAAC+TGG | + | chr4_4:47036688-47036707 | None:intergenic | 30.0% | |
| ACTATCTTTATCTCCACATT+TGG | + | chr4_4:47037311-47037330 | None:intergenic | 30.0% | |
| AAATGTGGAGATAAAGATAG+TGG | - | chr4_4:47037310-47037329 | Msa0683960:intron | 30.0% | |
| TCAATAGAAAATAAGTGGGA+TGG | - | chr4_4:47037511-47037530 | Msa0683960:intron | 30.0% | |
| ACTATACATGATTATGGTAC+TGG | - | chr4_4:47037564-47037583 | Msa0683960:five_prime_UTR | 30.0% | |
| ATAAATCCACCAGCAAAATT+TGG | + | chr4_4:47037676-47037695 | None:intergenic | 30.0% | |
| ! | ACTCTTCTCATTTGTTGCTT+TGG | - | chr4_4:47033464-47033483 | Msa0683960:three_prime_UTR | 35.0% |
| TGAAAGTCACGTAAAGTTGA+AGG | + | chr4_4:47033504-47033523 | None:intergenic | 35.0% | |
| ATGCAGGAATTGAAATTCTC+AGG | - | chr4_4:47033826-47033845 | Msa0683960:CDS | 35.0% | |
| AAATTCTCAGGTCTTTGCAA+TGG | - | chr4_4:47033838-47033857 | Msa0683960:CDS | 35.0% | |
| TTGAGTTACCTGAAAGAACT+TGG | + | chr4_4:47033936-47033955 | None:intergenic | 35.0% | |
| AACCATTCATTTAGATTGGG+CGG | + | chr4_4:47034570-47034589 | None:intergenic | 35.0% | |
| CTGCATGGTAATAGTAATAC+CGG | - | chr4_4:47034665-47034684 | Msa0683960:CDS | 35.0% | |
| ACCTCGAAATTAAATACCTC+TGG | - | chr4_4:47034699-47034718 | Msa0683960:CDS | 35.0% | |
| !! | ACCAGAGGTATTTAATTTCG+AGG | + | chr4_4:47034703-47034722 | None:intergenic | 35.0% |
| AACATGAGAATCTTGGTTAC+TGG | - | chr4_4:47034898-47034917 | Msa0683960:CDS | 35.0% | |
| TTTCCATCAATCTATCGACA+AGG | + | chr4_4:47034948-47034967 | None:intergenic | 35.0% | |
| GACAACCTCAAAAAATGGAT+TGG | - | chr4_4:47035181-47035200 | Msa0683960:CDS | 35.0% | |
| !!! | GATGACCAATCCATTTTTTG+AGG | + | chr4_4:47035189-47035208 | None:intergenic | 35.0% |
| ! | TGACGGATAAGTTCAAATCT+TGG | + | chr4_4:47035211-47035230 | None:intergenic | 35.0% |
| AGATTTGAACTTATCCGTCA+TGG | - | chr4_4:47035211-47035230 | Msa0683960:CDS | 35.0% | |
| !! | AGGTGGATTTTATACCATGA+CGG | + | chr4_4:47035228-47035247 | None:intergenic | 35.0% |
| !! | TTTGGTGATGTACTACCAAA+TGG | + | chr4_4:47035325-47035344 | None:intergenic | 35.0% |
| TTGTAGAAAATAGGAGATGC+GGG | + | chr4_4:47035614-47035633 | None:intergenic | 35.0% | |
| CTTTAATCAGACCGTTTACT+TGG | - | chr4_4:47035672-47035691 | Msa0683960:CDS | 35.0% | |
| ATAAACATACTGCAGAATGC+AGG | + | chr4_4:47035740-47035759 | None:intergenic | 35.0% | |
| TTTGCTTACATCAACTTCAG+AGG | - | chr4_4:47036016-47036035 | Msa0683960:intron | 35.0% | |
| ! | ACATCAACTTCAGAGGTATA+TGG | - | chr4_4:47036023-47036042 | Msa0683960:intron | 35.0% |
| ! | CATCAACTTCAGAGGTATAT+GGG | - | chr4_4:47036024-47036043 | Msa0683960:intron | 35.0% |
| ! | ATCAACTTCAGAGGTATATG+GGG | - | chr4_4:47036025-47036044 | Msa0683960:intron | 35.0% |
| AGAAGGTCAATATACAGGTT+GGG | + | chr4_4:47036124-47036143 | None:intergenic | 35.0% | |
| TATCATAGGCAACATGGAAT+AGG | - | chr4_4:47036401-47036420 | Msa0683960:intron | 35.0% | |
| AACATGGAATAGGTAATTCC+TGG | - | chr4_4:47036411-47036430 | Msa0683960:intron | 35.0% | |
| GCAAGAATCTTCAACACATA+TGG | - | chr4_4:47036544-47036563 | Msa0683960:intron | 35.0% | |
| ! | GTCTTTTCTAACGTAACCAT+TGG | - | chr4_4:47036700-47036719 | Msa0683960:intron | 35.0% |
| !! | TAACCATTGGTGTGTTTTAG+TGG | - | chr4_4:47036713-47036732 | Msa0683960:intron | 35.0% |
| !! | TTTAATGTCCCTTAGGTTGA+TGG | - | chr4_4:47036885-47036904 | Msa0683960:intron | 35.0% |
| GCAGCTTATTAATCCAAATG+TGG | - | chr4_4:47037295-47037314 | Msa0683960:intron | 35.0% | |
| ! | ATTATGGTACTGGAGAAGTT+GGG | - | chr4_4:47037574-47037593 | Msa0683960:five_prime_UTR | 35.0% |
| CTCTTGGAAGCTAAAATTTC+AGG | + | chr4_4:47037603-47037622 | None:intergenic | 35.0% | |
| TAGCAAATCTCTGATACTCT+TGG | + | chr4_4:47037619-47037638 | None:intergenic | 35.0% | |
| ! | CATTTCTGTCCAAATTTTGC+TGG | - | chr4_4:47037664-47037683 | Msa0683960:five_prime_UTR | 35.0% |
| TAAAGAGAAACATACAGCAG+GGG | + | chr4_4:47037725-47037744 | None:intergenic | 35.0% | |
| GTAAAGAGAAACATACAGCA+GGG | + | chr4_4:47037726-47037745 | None:intergenic | 35.0% | |
| TGTAAAGAGAAACATACAGC+AGG | + | chr4_4:47037727-47037746 | None:intergenic | 35.0% | |
| ! | TATATTGTTGCATAGTGGGA+AGG | + | chr4_4:47037849-47037868 | None:intergenic | 35.0% |
| GCAACAAATGAGAAGAGTGA+TGG | + | chr4_4:47033462-47033481 | None:intergenic | 40.0% | |
| ! | CACAAGAGTTGTTAGGGTTT+TGG | - | chr4_4:47033692-47033711 | Msa0683960:three_prime_UTR | 40.0% |
| TCTTCTCTAAACTCTCGATC+AGG | - | chr4_4:47033727-47033746 | Msa0683960:three_prime_UTR | 40.0% | |
| ATGGCAGGGAATTCTTCTAA+TGG | - | chr4_4:47033857-47033876 | Msa0683960:CDS | 40.0% | |
| AAAGAACTTGGAGAAACGCA+GGG | + | chr4_4:47033924-47033943 | None:intergenic | 40.0% | |
| AGTGATTATGTGTAGTCACG+TGG | - | chr4_4:47034165-47034184 | Msa0683960:intron | 40.0% | |
| GTGATTATGTGTAGTCACGT+GGG | - | chr4_4:47034166-47034185 | Msa0683960:intron | 40.0% | |
| TTCTCAATTATCATCCCCTC+AGG | + | chr4_4:47034425-47034444 | None:intergenic | 40.0% | |
| TGAATGACACAGTTACTCCA+GGG | + | chr4_4:47034533-47034552 | None:intergenic | 40.0% | |
| TTGAATGACACAGTTACTCC+AGG | + | chr4_4:47034534-47034553 | None:intergenic | 40.0% | |
| AACCGCCCAATCTAAATGAA+TGG | - | chr4_4:47034565-47034584 | Msa0683960:intron | 40.0% | |
| ! | GATCGAAATTGGTAACTGCA+TGG | - | chr4_4:47034650-47034669 | Msa0683960:intron | 40.0% |
| TTCGAGGTTAGATAAGGATC+CGG | + | chr4_4:47034687-47034706 | None:intergenic | 40.0% | |
| TAGACATTCTTGTGAACCAG+AGG | + | chr4_4:47034718-47034737 | None:intergenic | 40.0% | |
| ATGAGAATCTTGGTTACTGG+AGG | - | chr4_4:47034901-47034920 | Msa0683960:CDS | 40.0% | |
| TCACCTTGTCGATAGATTGA+TGG | - | chr4_4:47034942-47034961 | Msa0683960:intron | 40.0% | |
| GTTGCTGATAACTTCTTCAC+TGG | - | chr4_4:47035151-47035170 | Msa0683960:intron | 40.0% | |
| TAACTTCTTCACTGGATCGA+AGG | - | chr4_4:47035159-47035178 | Msa0683960:intron | 40.0% | |
| CGAAGGACAACCTCAAAAAA+TGG | - | chr4_4:47035176-47035195 | Msa0683960:intron | 40.0% | |
| CATCTACAAAGGGATCAGAA+TGG | + | chr4_4:47035541-47035560 | None:intergenic | 40.0% | |
| GTCTCAGTGACATCTACAAA+GGG | + | chr4_4:47035551-47035570 | None:intergenic | 40.0% | |
| AGTCTCAGTGACATCTACAA+AGG | + | chr4_4:47035552-47035571 | None:intergenic | 40.0% | |
| ! | CACTGAGACTTTGATGATTG+AGG | - | chr4_4:47035562-47035581 | Msa0683960:intron | 40.0% |
| ! | TGAGACTTTGATGATTGAGG+TGG | - | chr4_4:47035565-47035584 | Msa0683960:intron | 40.0% |
| TGTAGAAAATAGGAGATGCG+GGG | + | chr4_4:47035613-47035632 | None:intergenic | 40.0% | |
| AGACATTATCGTACCTTCAC+AGG | + | chr4_4:47035644-47035663 | None:intergenic | 40.0% | |
| ATATCTTCTGCATCACTCGT+TGG | - | chr4_4:47035758-47035777 | Msa0683960:intron | 40.0% | |
| ATCCTCAACCTGAAAGCTAT+TGG | - | chr4_4:47036060-47036079 | Msa0683960:CDS | 40.0% | |
| TCCTCAACCTGAAAGCTATT+GGG | - | chr4_4:47036061-47036080 | Msa0683960:CDS | 40.0% | |
| CAGAAGGTCAATATACAGGT+TGG | + | chr4_4:47036125-47036144 | None:intergenic | 40.0% | |
| TATACCATACAGAGAACGAG+AGG | + | chr4_4:47036457-47036476 | None:intergenic | 40.0% | |
| ! | TGCAACACGTATTTCTGCAT+TGG | + | chr4_4:47036527-47036546 | None:intergenic | 40.0% |
| GGAGAACATAGCAGAAGAAA+AGG | + | chr4_4:47036643-47036662 | None:intergenic | 40.0% | |
| TCACCACTAAAACACACCAA+TGG | + | chr4_4:47036719-47036738 | None:intergenic | 40.0% | |
| ATTGAACGGGACATATTACC+AGG | + | chr4_4:47036799-47036818 | None:intergenic | 40.0% | |
| ! | TTGAGTCTCTTTGCCTTTTC+AGG | - | chr4_4:47037026-47037045 | Msa0683960:intron | 40.0% |
| CATCGTGAATTCACCTGAAA+AGG | + | chr4_4:47037042-47037061 | None:intergenic | 40.0% | |
| TTCAGGTGAATTCACGATGA+TGG | - | chr4_4:47037043-47037062 | Msa0683960:intron | 40.0% | |
| TCTATATCGCTATTGCGTAG+CGG | - | chr4_4:47037156-47037175 | Msa0683960:intron | 40.0% | |
| ! | GTGTTGACAATTGCAAATCG+TGG | + | chr4_4:47037203-47037222 | None:intergenic | 40.0% |
| TTTCTCTGTCTTGGATCATC+AGG | + | chr4_4:47037344-47037363 | None:intergenic | 40.0% | |
| !!! | ATGTCTGGTTTTCTCTGTCT+TGG | + | chr4_4:47037353-47037372 | None:intergenic | 40.0% |
| ACCAGACATAACCAAAGCAA+AGG | - | chr4_4:47037364-47037383 | Msa0683960:CDS | 40.0% | |
| TCCTTTGCTTTGGTTATGTC+TGG | + | chr4_4:47037368-47037387 | None:intergenic | 40.0% | |
| ACCAAAGCAAAGGAATTGCT+TGG | - | chr4_4:47037374-47037393 | Msa0683960:CDS | 40.0% | |
| ! | GATTATGGTACTGGAGAAGT+TGG | - | chr4_4:47037573-47037592 | Msa0683960:five_prime_UTR | 40.0% |
| ! | TTATGGTACTGGAGAAGTTG+GGG | - | chr4_4:47037575-47037594 | Msa0683960:five_prime_UTR | 40.0% |
| ! | TTCTGTCCAAATTTTGCTGG+TGG | - | chr4_4:47037667-47037686 | Msa0683960:five_prime_UTR | 40.0% |
| AAGAACTTGGAGAAACGCAG+GGG | + | chr4_4:47033923-47033942 | None:intergenic | 45.0% | |
| GAAAGAACTTGGAGAAACGC+AGG | + | chr4_4:47033925-47033944 | None:intergenic | 45.0% | |
| GCGTTTCTCCAAGTTCTTTC+AGG | - | chr4_4:47033925-47033944 | Msa0683960:CDS | 45.0% | |
| CGTAGCAAGTAGCACAAACA+CGG | - | chr4_4:47034089-47034108 | Msa0683960:intron | 45.0% | |
| TTATGTGTAGTCACGTGGGT+CGG | - | chr4_4:47034170-47034189 | Msa0683960:intron | 45.0% | |
| TTAGATTGGGCGGTTGAGAT+CGG | + | chr4_4:47034560-47034579 | None:intergenic | 45.0% | |
| ATTGGCACTCTGAACATGCT+TGG | - | chr4_4:47035865-47035884 | Msa0683960:intron | 45.0% | |
| TTGGCACTCTGAACATGCTT+GGG | - | chr4_4:47035866-47035885 | Msa0683960:intron | 45.0% | |
| TTGCAAAGAGAGTTGGAGCA+AGG | - | chr4_4:47035890-47035909 | Msa0683960:intron | 45.0% | |
| AAGAGAGTTGGAGCAAGGTT+AGG | - | chr4_4:47035895-47035914 | Msa0683960:intron | 45.0% | |
| CCTCAACCTGAAAGCTATTG+GGG | - | chr4_4:47036062-47036081 | Msa0683960:CDS | 45.0% | |
| ACATTGCCCCAATAGCTTTC+AGG | + | chr4_4:47036071-47036090 | None:intergenic | 45.0% | |
| TGGGGCAATGTTAACCCTAT+TGG | - | chr4_4:47036080-47036099 | Msa0683960:CDS | 45.0% | |
| ATTAAGAGGAACAGCAGACC+AGG | + | chr4_4:47036432-47036451 | None:intergenic | 45.0% | |
| GAGAACGAGAGGAGATTAAG+AGG | + | chr4_4:47036446-47036465 | None:intergenic | 45.0% | |
| ATCTCCTCTCGTTCTCTGTA+TGG | - | chr4_4:47036450-47036469 | Msa0683960:intron | 45.0% | |
| CCATCATCGATATTCATGCG+AGG | + | chr4_4:47036571-47036590 | None:intergenic | 45.0% | |
| CCTCGCATGAATATCGATGA+TGG | - | chr4_4:47036568-47036587 | Msa0683960:intron | 45.0% | |
| ! | ACTTCATTGCTCAAGCACTG+CGG | - | chr4_4:47036605-47036624 | Msa0683960:intron | 45.0% |
| TTTCTGCTATGTCTCTGACC+TGG | - | chr4_4:47036778-47036797 | Msa0683960:intron | 45.0% | |
| GGATAAGGCCATCAACCTAA+GGG | + | chr4_4:47036896-47036915 | None:intergenic | 45.0% | |
| GACACTGGTCCAATCAATCT+TGG | - | chr4_4:47036933-47036952 | Msa0683960:intron | 45.0% | |
| GCCAAGCAATTCCTTTGCTT+TGG | + | chr4_4:47037378-47037397 | None:intergenic | 45.0% | |
| AAGCAAAGGAATTGCTTGGC+TGG | - | chr4_4:47037378-47037397 | Msa0683960:CDS | 45.0% | |
| AGCAAAGGAATTGCTTGGCT+GGG | - | chr4_4:47037379-47037398 | Msa0683960:CDS | 45.0% | |
| TGGAAGGAGATTTCCGTTTG+AGG | - | chr4_4:47037438-47037457 | Msa0683960:intron | 45.0% | |
| TGTCAACTCCAAGCCTCAAA+CGG | + | chr4_4:47037454-47037473 | None:intergenic | 45.0% | |
| TCTCAGGTCTTTGCAATGGC+AGG | - | chr4_4:47033842-47033861 | Msa0683960:CDS | 50.0% | |
| CTCAGGTCTTTGCAATGGCA+GGG | - | chr4_4:47033843-47033862 | Msa0683960:CDS | 50.0% | |
| ! | GAGGTTGTAGCAAGCTCTGA+TGG | + | chr4_4:47034367-47034386 | None:intergenic | 50.0% |
| ATCTTGGTTACTGGAGGAGC+TGG | - | chr4_4:47034907-47034926 | Msa0683960:CDS | 50.0% | |
| ! | ACTGGAGGAGCTGGTTTCAT+TGG | - | chr4_4:47034916-47034935 | Msa0683960:intron | 50.0% |
| CTTGGGCTTGCAAAGAGAGT+TGG | - | chr4_4:47035883-47035902 | Msa0683960:intron | 50.0% | |
| !! | TCAGGTTGAGGATGCTCAAG+AGG | + | chr4_4:47036053-47036072 | None:intergenic | 50.0% |
| !! | CCCCAATAGCTTTCAGGTTG+AGG | + | chr4_4:47036065-47036084 | None:intergenic | 50.0% |
| AGTTCGTAGCTGCTATGACG+AGG | - | chr4_4:47036346-47036365 | Msa0683960:CDS | 50.0% | |
| GTTCGTAGCTGCTATGACGA+GGG | - | chr4_4:47036347-47036366 | Msa0683960:CDS | 50.0% | |
| TTCGTAGCTGCTATGACGAG+GGG | - | chr4_4:47036348-47036367 | Msa0683960:CDS | 50.0% | |
| AAACTGCGAGTTTGCGTTCC+TGG | + | chr4_4:47036761-47036780 | None:intergenic | 50.0% | |
| CGGATAAGGCCATCAACCTA+AGG | + | chr4_4:47036897-47036916 | None:intergenic | 50.0% | |
| !! | TGATGGCCTTATCCGTCTCA+TGG | - | chr4_4:47036902-47036921 | Msa0683960:intron | 50.0% |
| !! | GATGGCCTTATCCGTCTCAT+GGG | - | chr4_4:47036903-47036922 | Msa0683960:intron | 50.0% |
| ATCCTCCCATGAGACGGATA+AGG | + | chr4_4:47036911-47036930 | None:intergenic | 50.0% | |
| TGTCTGATCCTCCCATGAGA+CGG | + | chr4_4:47036917-47036936 | None:intergenic | 50.0% | |
| CCTGGGTTGCCAAGATTGAT+TGG | + | chr4_4:47036945-47036964 | None:intergenic | 50.0% | |
| CCAATCAATCTTGGCAACCC+AGG | - | chr4_4:47036942-47036961 | Msa0683960:intron | 50.0% | |
| !! | GGAACTTGCTGAGACAGTGA+AGG | - | chr4_4:47037064-47037083 | Msa0683960:intron | 50.0% |
| ! | ACTTGCTGAGACAGTGAAGG+AGG | - | chr4_4:47037067-47037086 | Msa0683960:intron | 50.0% |
| ATTGCTTGGCTGGGAACCAA+AGG | - | chr4_4:47037388-47037407 | Msa0683960:CDS | 50.0% | |
| CCTTCACTCAGCTTGACCTT+TGG | + | chr4_4:47037407-47037426 | None:intergenic | 50.0% | |
| CCAAAGGTCAAGCTGAGTGA+AGG | - | chr4_4:47037404-47037423 | Msa0683960:exon | 50.0% | |
| GAGTGAAGGTCTTCCTCTCA+TGG | - | chr4_4:47037418-47037437 | Msa0683960:exon | 50.0% | |
| GAAGGTCTTCCTCTCATGGA+AGG | - | chr4_4:47037422-47037441 | Msa0683960:exon | 50.0% | |
| CGGAAATCTCCTTCCATGAG+AGG | + | chr4_4:47037434-47037453 | None:intergenic | 50.0% | |
| ! | GGAGATTTCCGTTTGAGGCT+TGG | - | chr4_4:47037443-47037462 | Msa0683960:intron | 50.0% |
| AGGAGGCTGCTTAGCTGTTG+TGG | + | chr4_4:47033891-47033910 | None:intergenic | 55.0% | |
| AAACGCAGGGGAGATGGCAA+AGG | + | chr4_4:47033911-47033930 | None:intergenic | 55.0% | |
| TTGGAGAAACGCAGGGGAGA+TGG | + | chr4_4:47033917-47033936 | None:intergenic | 55.0% | |
| CTATGACGAGGGGAAACGTG+TGG | - | chr4_4:47036358-47036377 | Msa0683960:CDS | 55.0% | |
| CTCATGGGAGGATCAGACAC+TGG | - | chr4_4:47036918-47036937 | Msa0683960:intron | 55.0% | |
| GCTGAGACAGTGAAGGAGGT+CGG | - | chr4_4:47037071-47037090 | Msa0683960:intron | 55.0% | |
| GTAGTCACGTGGGTCGGTGT+TGG | - | chr4_4:47034176-47034195 | Msa0683960:intron | 60.0% | |
| TCCTTGACTGTCCAAGCGCC+AGG | - | chr4_4:47036740-47036759 | Msa0683960:intron | 60.0% | |
| TCCTGGCGCTTGGACAGTCA+AGG | + | chr4_4:47036744-47036763 | None:intergenic | 60.0% | |
| GAGTTTGCGTTCCTGGCGCT+TGG | + | chr4_4:47036754-47036773 | None:intergenic | 60.0% | |
| ! | GGCCTTATCCGTCTCATGGG+AGG | - | chr4_4:47036906-47036925 | Msa0683960:intron | 60.0% |
| CGCAGGGGAGATGGCAAAGG+AGG | + | chr4_4:47033908-47033927 | None:intergenic | 65.0% | |
| GAGATGCGGGGCATGCGAGA+TGG | + | chr4_4:47035601-47035620 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 47033398 | 47037881 | 47033398 | ID=Msa0683960;Name=Msa0683960 |
| chr4_4 | mRNA | 47033398 | 47037881 | 47033398 | ID=Msa0683960-mRNA-1;Parent=Msa0683960;Name=Msa0683960-mRNA-1;_AED=0.09;_eAED=0.09;_QI=376|1|1|1|0.91|0.84|13|397|346 |
| chr4_4 | exon | 47033398 | 47033980 | 47033398 | ID=Msa0683960-mRNA-1:exon:11583;Parent=Msa0683960-mRNA-1 |
| chr4_4 | exon | 47034191 | 47034231 | 47034191 | ID=Msa0683960-mRNA-1:exon:11582;Parent=Msa0683960-mRNA-1 |
| chr4_4 | exon | 47034316 | 47034379 | 47034316 | ID=Msa0683960-mRNA-1:exon:11581;Parent=Msa0683960-mRNA-1 |
| chr4_4 | exon | 47034480 | 47034546 | 47034480 | ID=Msa0683960-mRNA-1:exon:11580;Parent=Msa0683960-mRNA-1 |
| chr4_4 | exon | 47034653 | 47034746 | 47034653 | ID=Msa0683960-mRNA-1:exon:11579;Parent=Msa0683960-mRNA-1 |
| chr4_4 | exon | 47034857 | 47034934 | 47034857 | ID=Msa0683960-mRNA-1:exon:11578;Parent=Msa0683960-mRNA-1 |
| chr4_4 | exon | 47035178 | 47035266 | 47035178 | ID=Msa0683960-mRNA-1:exon:11577;Parent=Msa0683960-mRNA-1 |
| chr4_4 | exon | 47035368 | 47035432 | 47035368 | ID=Msa0683960-mRNA-1:exon:11576;Parent=Msa0683960-mRNA-1 |
| chr4_4 | exon | 47035630 | 47035721 | 47035630 | ID=Msa0683960-mRNA-1:exon:11575;Parent=Msa0683960-mRNA-1 |
| chr4_4 | exon | 47036047 | 47036134 | 47036047 | ID=Msa0683960-mRNA-1:exon:11574;Parent=Msa0683960-mRNA-1 |
| chr4_4 | exon | 47036298 | 47036384 | 47036298 | ID=Msa0683960-mRNA-1:exon:11573;Parent=Msa0683960-mRNA-1 |
| chr4_4 | exon | 47037333 | 47037447 | 47037333 | ID=Msa0683960-mRNA-1:exon:11572;Parent=Msa0683960-mRNA-1 |
| chr4_4 | exon | 47037531 | 47037881 | 47037531 | ID=Msa0683960-mRNA-1:exon:11571;Parent=Msa0683960-mRNA-1 |
| chr4_4 | five_prime_UTR | 47037531 | 47037881 | 47037531 | ID=Msa0683960-mRNA-1:five_prime_utr;Parent=Msa0683960-mRNA-1 |
| chr4_4 | five_prime_UTR | 47037423 | 47037447 | 47037423 | ID=Msa0683960-mRNA-1:five_prime_utr;Parent=Msa0683960-mRNA-1 |
| chr4_4 | CDS | 47037333 | 47037422 | 47037333 | ID=Msa0683960-mRNA-1:cds;Parent=Msa0683960-mRNA-1 |
| chr4_4 | CDS | 47036298 | 47036384 | 47036298 | ID=Msa0683960-mRNA-1:cds;Parent=Msa0683960-mRNA-1 |
| chr4_4 | CDS | 47036047 | 47036134 | 47036047 | ID=Msa0683960-mRNA-1:cds;Parent=Msa0683960-mRNA-1 |
| chr4_4 | CDS | 47035630 | 47035721 | 47035630 | ID=Msa0683960-mRNA-1:cds;Parent=Msa0683960-mRNA-1 |
| chr4_4 | CDS | 47035368 | 47035432 | 47035368 | ID=Msa0683960-mRNA-1:cds;Parent=Msa0683960-mRNA-1 |
| chr4_4 | CDS | 47035178 | 47035266 | 47035178 | ID=Msa0683960-mRNA-1:cds;Parent=Msa0683960-mRNA-1 |
| chr4_4 | CDS | 47034857 | 47034934 | 47034857 | ID=Msa0683960-mRNA-1:cds;Parent=Msa0683960-mRNA-1 |
| chr4_4 | CDS | 47034653 | 47034746 | 47034653 | ID=Msa0683960-mRNA-1:cds;Parent=Msa0683960-mRNA-1 |
| chr4_4 | CDS | 47034480 | 47034546 | 47034480 | ID=Msa0683960-mRNA-1:cds;Parent=Msa0683960-mRNA-1 |
| chr4_4 | CDS | 47034316 | 47034379 | 47034316 | ID=Msa0683960-mRNA-1:cds;Parent=Msa0683960-mRNA-1 |
| chr4_4 | CDS | 47034191 | 47034231 | 47034191 | ID=Msa0683960-mRNA-1:cds;Parent=Msa0683960-mRNA-1 |
| chr4_4 | CDS | 47033795 | 47033980 | 47033795 | ID=Msa0683960-mRNA-1:cds;Parent=Msa0683960-mRNA-1 |
| chr4_4 | three_prime_UTR | 47033398 | 47033794 | 47033398 | ID=Msa0683960-mRNA-1:three_prime_utr;Parent=Msa0683960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
