AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0128310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0128310 MtrunA17_Chr1g0195111 98.335 1021 7 2 1 1021 1 1011 0.0 2075
Msa0128310 MtrunA17_Chr7g0271961 54.917 1027 402 18 13 1021 16 999 0.0 1048
Msa0128310 MtrunA17_Chr7g0269691 80.510 549 102 1 8 556 12 555 0.0 894
Msa0128310 MtrunA17_Chr3g0102921 48.832 856 370 18 23 830 41 876 0.0 735
Msa0128310 MtrunA17_Chr5g0447041 47.568 843 353 15 23 787 37 868 0.0 728
Msa0128310 MtrunA17_Chr7g0269681 76.923 468 98 4 556 1020 21 481 0.0 724
Msa0128310 MtrunA17_Chr1g0192481 72.664 428 108 5 341 765 3 424 0.0 636
Msa0128310 MtrunA17_Chr7g0257301 45.980 796 336 19 25 760 14 775 0.0 624
Msa0128310 MtrunA17_Chr5g0411971 43.243 444 224 7 334 763 327 756 8.64e-104 349
Msa0128310 MtrunA17_Chr5g0421521 42.793 444 226 7 334 763 302 731 9.33e-103 344
Msa0128310 MtrunA17_Chr5g0421591 45.918 392 194 5 376 763 354 731 5.17e-102 340
Msa0128310 MtrunA17_Chr2g0312631 42.955 440 219 9 354 775 334 759 1.15e-100 340
Msa0128310 MtrunA17_Chr1g0191851 47.594 374 172 5 382 747 133 490 2.31e-100 333
Msa0128310 MtrunA17_Chr1g0192491 60.150 266 99 1 4 262 9 274 1.60e-99 315
Msa0128310 MtrunA17_Chr7g0272871 45.722 374 191 4 376 747 107 470 4.16e-94 315
Msa0128310 MtrunA17_Chr2g0319271 43.979 382 171 11 384 739 387 751 3.39e-87 297
Msa0128310 MtrunA17_Chr4g0042061 44.709 378 173 11 384 739 420 783 5.32e-85 291
Msa0128310 MtrunA17_Chr2g0280421 43.514 370 168 10 384 734 425 772 1.19e-84 290
Msa0128310 MtrunA17_Chr8g0386891 70.899 189 55 0 576 764 4 192 1.59e-83 276
Msa0128310 MtrunA17_Chr6g0484501 63.208 212 77 1 554 764 11 222 1.05e-76 251
Msa0128310 MtrunA17_Chr8g0386901 55.745 235 97 3 324 556 411 640 1.84e-76 265
Msa0128310 MtrunA17_Chr4g0049011 40.054 372 190 8 384 735 267 625 2.61e-76 263
Msa0128310 MtrunA17_Chr5g0407791 38.557 402 231 7 360 759 853 1240 2.13e-74 268
Msa0128310 MtrunA17_Chr6g0484511 52.679 224 100 2 334 556 227 445 1.41e-73 252
Msa0128310 MtrunA17_Chr8g0369881 39.084 371 211 5 360 728 839 1196 3.05e-71 258
Msa0128310 MtrunA17_Chr8g0390981 51.681 238 108 3 334 569 453 685 4.85e-70 247
Msa0128310 MtrunA17_Chr8g0390991 65.079 189 63 1 576 764 4 189 8.66e-69 240
Msa0128310 MtrunA17_Chr1g0191181 41.828 361 187 9 377 729 69 414 1.72e-65 233
Msa0128310 MtrunA17_Chr4g0069141 36.321 424 209 14 401 787 153 552 3.92e-59 222
Msa0128310 MtrunA17_Chr4g0045381 38.947 380 202 12 398 757 190 559 1.12e-58 221
Msa0128310 MtrunA17_Chr2g0322291 40.263 380 193 13 401 758 88 455 2.68e-58 219
Msa0128310 MtrunA17_Chr3g0122121 37.783 397 206 12 402 772 99 480 5.08e-58 218
Msa0128310 MtrunA17_Chr3g0132921 32.668 401 231 8 399 768 7 399 1.05e-57 208
Msa0128310 MtrunA17_Chr8g0367581 36.386 415 214 16 379 774 129 512 1.10e-56 214
Msa0128310 MtrunA17_Chr5g0398521 37.151 358 189 9 398 729 54 401 8.15e-55 206
Msa0128310 MtrunA17_Chr3g0134191 33.086 405 226 10 402 769 9 405 4.22e-54 205
Msa0128310 MtrunA17_Chr1g0178411 36.648 352 195 8 401 728 13 360 6.34e-54 204
Msa0128310 MtrunA17_Chr7g0266631 35.176 398 225 11 393 762 1 393 6.93e-54 204
Msa0128310 MtrunA17_Chr1g0182151 37.429 350 191 9 401 728 54 397 1.13e-53 204
Msa0128310 MtrunA17_Chr8g0377731 37.731 379 200 10 402 758 56 420 1.51e-53 204
Msa0128310 MtrunA17_Chr5g0427481 34.197 386 212 11 399 756 15 386 4.26e-53 202
Msa0128310 MtrunA17_Chr2g0327581 34.896 384 224 12 401 762 49 428 5.04e-53 202
Msa0128310 MtrunA17_Chr4g0053211 34.243 403 214 13 401 761 12 405 1.27e-52 200
Msa0128310 MtrunA17_Chr2g0307481 36.800 375 212 10 402 764 69 430 2.78e-52 195
Msa0128310 MtrunA17_Chr1g0153061 34.005 397 217 12 402 761 9 397 3.26e-52 199
Msa0128310 MtrunA17_Chr1g0193221 37.736 371 197 11 402 756 4 356 7.40e-52 199
Msa0128310 MtrunA17_Chr4g0062291 39.088 307 172 6 443 744 174 470 2.05e-51 193
Msa0128310 MtrunA17_Chr1g0152231 36.639 363 200 10 402 748 4 352 2.91e-51 194
Msa0128310 MtrunA17_Chr7g0245931 35.537 363 195 9 394 729 45 395 4.77e-51 194
Msa0128310 MtrunA17_Chr5g0405181 36.729 373 199 13 402 756 21 374 3.40e-49 189
Msa0128310 MtrunA17_Chr8g0372171 36.533 375 201 14 402 758 20 375 4.87e-48 186
Msa0128310 MtrunA17_Chr4g0036001 35.450 378 214 11 394 756 14 376 2.79e-47 182
Msa0128310 MtrunA17_Chr6g0483701 37.425 334 179 12 435 756 67 382 6.06e-47 182
Msa0128310 MtrunA17_Chr4g0070001 33.509 379 227 11 395 765 136 497 1.21e-44 175
Msa0128310 MtrunA17_Chr3g0145071 35.262 363 213 11 401 756 99 446 2.87e-44 174
Msa0128310 MtrunA17_Chr4g0035661 34.121 381 215 12 390 756 78 436 7.03e-44 173
Msa0128310 MtrunA17_Chr7g0258991 33.592 387 223 11 384 756 56 422 1.03e-43 172
Msa0128310 MtrunA17_Chr3g0142261 35.494 324 181 10 444 756 66 372 1.23e-43 173
Msa0128310 MtrunA17_Chr5g0445211 31.899 395 231 11 401 772 74 453 4.38e-42 167
Msa0128310 MtrunA17_Chr3g0101021 33.898 354 206 11 441 772 104 451 2.74e-40 162
Msa0128310 MtrunA17_Chr7g0238581 31.608 367 188 14 393 732 16 346 7.45e-35 142
Msa0128310 MtrunA17_Chr2g0331761 31.081 296 182 6 442 731 232 511 2.42e-34 141
Msa0128310 MtrunA17_Chr4g0067421 32.459 305 170 8 442 728 253 539 8.63e-34 140
Msa0128310 MtrunA17_Chr2g0295881 32.131 305 173 7 442 728 245 533 8.92e-34 140
Msa0128310 MtrunA17_Chr6g0485471 30.405 296 184 6 442 731 162 441 4.54e-33 137
Msa0128310 MtrunA17_Chr1g0187411 31.034 319 178 10 441 731 167 471 6.28e-28 121
Msa0128310 MtrunA17_Chr6g0470541 28.483 323 187 16 402 707 6 301 1.34e-17 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0128310 AT2G47500.1 63.957 1021 310 12 2 1016 9 977 0.0 1244
Msa0128310 AT2G47500.2 65.071 982 288 11 2 977 9 941 0.0 1228
Msa0128310 AT5G27000.1 55.501 1027 373 26 4 1006 11 977 0.0 1031
Msa0128310 AT1G09170.5 49.193 1053 444 27 6 1004 10 1025 0.0 904
Msa0128310 AT1G09170.4 57.595 790 293 11 6 760 10 792 0.0 896
Msa0128310 AT1G09170.2 57.595 790 293 11 6 760 10 792 0.0 896
Msa0128310 AT1G09170.3 56.996 779 293 11 6 749 10 781 0.0 874
Msa0128310 AT1G09170.7 56.996 779 293 11 6 749 10 781 0.0 874
Msa0128310 AT1G09170.1 47.104 1053 430 27 6 1004 10 989 0.0 842
Msa0128310 AT1G09170.6 55.234 726 283 11 6 696 10 728 0.0 788
Msa0128310 AT1G09170.8 55.234 726 283 11 6 696 10 728 0.0 788
Msa0128310 AT3G44730.2 51.114 808 329 19 25 785 21 809 0.0 747
Msa0128310 AT3G44730.3 51.114 808 329 19 25 785 21 809 0.0 747
Msa0128310 AT3G44730.1 51.028 778 316 18 55 785 5 764 0.0 718
Msa0128310 AT3G44730.4 51.028 778 316 18 55 785 5 764 0.0 718
Msa0128310 AT3G10310.2 46.036 782 366 18 21 783 3 747 0.0 600
Msa0128310 AT3G10310.1 46.036 782 366 18 21 783 3 747 0.0 600
Msa0128310 AT1G73860.2 58.315 451 180 4 316 764 347 791 4.42e-173 531
Msa0128310 AT1G73860.1 58.315 451 180 4 316 764 430 874 9.33e-172 530
Msa0128310 AT1G18410.3 58.980 451 176 5 316 764 410 853 4.31e-171 528
Msa0128310 AT1G18410.2 58.980 451 176 5 316 764 410 853 4.31e-171 528
Msa0128310 AT1G18410.4 58.980 451 176 5 316 764 553 996 1.62e-169 528
Msa0128310 AT1G18410.1 58.758 451 169 6 316 764 553 988 2.10e-166 519
Msa0128310 AT1G63640.1 57.456 456 183 5 315 765 388 837 3.34e-166 516
Msa0128310 AT1G63640.4 57.456 456 183 5 315 765 388 837 3.34e-166 516
Msa0128310 AT1G63640.3 57.456 456 183 5 315 765 388 837 3.54e-166 516
Msa0128310 AT1G63640.5 57.456 456 183 5 315 765 378 827 4.21e-166 516
Msa0128310 AT1G63640.2 57.456 456 176 5 315 765 388 830 4.07e-165 514
Msa0128310 AT1G18410.5 58.093 451 167 7 316 764 400 830 7.60e-164 508
Msa0128310 AT5G41310.1 52.772 487 197 6 283 764 310 768 4.49e-161 500
Msa0128310 AT2G22610.2 45.750 400 190 7 384 773 405 787 1.06e-99 338
Msa0128310 AT2G22610.1 45.750 400 190 7 384 773 405 787 1.15e-99 338
Msa0128310 AT2G22610.3 45.750 400 190 7 384 773 406 788 1.30e-99 338
Msa0128310 AT5G27550.2 45.910 379 183 4 382 753 118 481 1.37e-98 328
Msa0128310 AT5G27550.1 45.910 379 183 4 382 753 118 481 1.37e-98 328
Msa0128310 AT1G72250.1 44.988 409 194 7 381 775 476 867 2.14e-98 337
Msa0128310 AT1G72250.2 44.988 409 194 7 381 775 485 876 2.33e-98 337
Msa0128310 AT1G72250.4 44.988 409 194 7 381 775 496 887 2.87e-98 337
Msa0128310 AT1G72250.3 44.988 409 194 7 381 775 497 888 2.99e-98 337
Msa0128310 AT5G54670.3 45.109 368 173 8 384 734 324 679 3.03e-91 306
Msa0128310 AT4G27180.1 46.092 371 163 8 384 733 375 729 4.14e-91 307
Msa0128310 AT4G27180.2 46.092 371 163 8 384 733 375 729 4.14e-91 307
Msa0128310 AT5G54670.1 45.109 368 173 8 384 734 384 739 1.23e-90 306
Msa0128310 AT5G54670.2 45.109 368 173 8 384 734 384 739 1.23e-90 306
Msa0128310 AT4G05190.2 41.895 401 198 8 358 734 373 762 1.57e-84 290
Msa0128310 AT4G05190.1 41.895 401 198 8 358 734 386 775 2.23e-84 290
Msa0128310 AT4G21270.1 43.236 377 171 9 384 734 419 778 1.05e-81 283
Msa0128310 AT1G55550.1 36.092 435 238 7 384 794 79 497 3.16e-75 266
Msa0128310 AT5G65930.2 41.449 345 191 4 384 728 876 1209 3.87e-74 268
Msa0128310 AT5G65930.1 41.449 345 191 4 384 728 875 1208 3.99e-74 268
Msa0128310 AT5G65930.3 41.449 345 191 4 384 728 882 1215 5.07e-74 267
Msa0128310 AT5G27950.1 41.989 362 180 10 380 729 62 405 7.99e-67 237
Msa0128310 AT3G17360.2 36.285 463 247 17 445 884 210 647 2.46e-61 229
Msa0128310 AT3G17360.3 36.147 462 241 17 445 884 210 639 4.38e-61 229
Msa0128310 AT3G17360.1 36.147 462 241 17 445 884 210 639 4.61e-61 229
Msa0128310 AT3G44050.1 38.482 382 203 11 401 761 93 463 3.11e-58 219
Msa0128310 AT3G19050.1 42.724 323 161 10 445 749 235 551 5.97e-58 219
Msa0128310 AT2G36200.1 36.154 390 216 12 401 762 12 396 1.91e-55 209
Msa0128310 AT2G36200.2 36.154 390 216 12 401 762 12 396 2.28e-55 209
Msa0128310 AT2G37420.1 40.514 311 157 8 438 728 88 390 2.57e-55 209
Msa0128310 AT2G37420.2 40.514 311 157 8 438 728 88 390 2.57e-55 209
Msa0128310 AT3G63480.2 39.236 288 164 4 444 724 47 330 2.86e-55 199
Msa0128310 AT3G23670.2 36.908 401 212 10 384 758 76 461 2.97e-55 208
Msa0128310 AT3G23670.1 36.908 401 212 10 384 758 76 461 5.54e-55 209
Msa0128310 AT5G65460.6 33.827 405 223 12 379 762 121 501 8.94e-55 207
Msa0128310 AT5G65460.2 33.827 405 223 12 379 762 121 501 1.01e-54 207
Msa0128310 AT5G65460.1 33.827 405 223 12 379 762 121 501 1.36e-54 207
Msa0128310 AT5G65460.4 33.827 405 223 12 379 762 121 501 1.62e-54 207
Msa0128310 AT3G63480.1 39.726 292 161 6 444 724 47 334 2.04e-54 197
Msa0128310 AT5G65460.3 33.824 408 226 12 379 762 121 508 5.15e-54 206
Msa0128310 AT1G59540.1 36.438 365 209 11 402 756 4 355 2.07e-53 201
Msa0128310 AT4G14150.1 35.930 398 216 10 384 758 75 456 2.86e-53 204
Msa0128310 AT5G47820.2 33.085 402 220 11 401 761 11 404 3.12e-53 202
Msa0128310 AT5G47820.1 33.085 402 220 11 401 761 11 404 3.12e-53 202
Msa0128310 AT2G28620.3 35.476 389 215 12 401 762 50 429 6.31e-53 202
Msa0128310 AT2G28620.2 35.476 389 215 12 401 762 50 429 6.31e-53 202
Msa0128310 AT2G28620.1 35.476 389 215 12 401 762 50 429 7.21e-53 201
Msa0128310 AT5G60930.2 32.360 445 241 12 399 792 4 439 9.88e-53 202
Msa0128310 AT5G60930.1 32.360 445 241 12 399 792 4 439 1.10e-52 202
Msa0128310 AT5G60930.3 32.360 445 241 12 399 792 4 439 1.29e-52 201
Msa0128310 AT4G24170.1 36.043 369 203 10 402 756 7 356 1.08e-51 197
Msa0128310 AT4G24170.2 36.043 369 203 10 402 756 7 356 1.08e-51 197
Msa0128310 AT1G12430.1 38.535 314 164 6 437 729 108 413 1.28e-50 194
Msa0128310 AT1G12430.2 38.535 314 164 6 437 729 108 413 1.29e-50 194
Msa0128310 AT4G38950.3 35.641 390 221 11 402 781 14 383 1.44e-50 193
Msa0128310 AT4G38950.5 35.641 390 221 11 402 781 14 383 1.44e-50 193
Msa0128310 AT4G38950.4 35.641 390 221 11 402 781 14 383 1.44e-50 193
Msa0128310 AT4G38950.1 35.641 390 221 11 402 781 14 383 1.44e-50 193
Msa0128310 AT4G38950.2 35.641 390 221 11 402 781 14 383 1.44e-50 193
Msa0128310 AT3G50240.2 33.333 393 217 12 402 757 26 410 1.80e-50 194
Msa0128310 AT3G50240.4 33.333 393 217 12 402 757 26 410 2.54e-50 194
Msa0128310 AT3G50240.1 33.333 393 217 12 402 757 26 410 2.80e-50 194
Msa0128310 AT5G10470.2 35.057 348 204 8 379 724 125 452 5.05e-50 193
Msa0128310 AT5G10470.1 35.057 348 204 8 379 724 125 452 5.09e-50 193
Msa0128310 AT3G49650.1 33.333 339 206 5 437 763 58 388 6.19e-50 191
Msa0128310 AT1G01950.2 35.655 359 196 10 396 729 55 403 1.01e-49 191
Msa0128310 AT1G18550.1 36.795 337 187 8 443 763 202 528 1.17e-49 189
Msa0128310 AT1G01950.1 35.655 359 196 10 396 729 55 403 1.31e-49 191
Msa0128310 AT1G01950.3 35.655 359 196 10 396 729 55 403 1.62e-49 190
Msa0128310 AT3G45850.2 34.896 384 222 13 402 762 56 434 2.78e-49 191
Msa0128310 AT3G45850.1 34.896 384 222 13 402 762 56 434 2.78e-49 191
Msa0128310 AT1G18370.1 39.815 324 163 12 444 754 77 381 7.36e-49 189
Msa0128310 AT2G21300.2 35.422 367 210 10 402 756 25 376 2.18e-48 186
Msa0128310 AT2G21300.4 35.422 367 210 10 402 756 25 376 2.18e-48 186
Msa0128310 AT2G21300.3 35.422 367 210 10 402 756 25 376 2.18e-48 186
Msa0128310 AT2G21300.1 35.422 367 210 10 402 756 25 376 2.18e-48 186
Msa0128310 AT2G21300.5 35.422 367 210 10 402 756 25 376 2.18e-48 186
Msa0128310 AT3G43210.3 37.368 380 205 14 395 760 22 382 6.77e-48 186
Msa0128310 AT3G43210.5 37.368 380 205 14 395 760 22 382 6.77e-48 186
Msa0128310 AT3G43210.2 37.368 380 205 14 395 760 22 382 6.77e-48 186
Msa0128310 AT3G43210.4 37.368 380 205 14 395 760 22 382 6.77e-48 186
Msa0128310 AT3G43210.1 37.368 380 205 14 395 760 22 382 6.77e-48 186
Msa0128310 AT3G54870.3 35.484 310 172 7 437 728 142 441 9.83e-48 185
Msa0128310 AT3G54870.1 35.484 310 172 7 437 728 142 441 9.87e-48 185
Msa0128310 AT3G54870.2 35.484 310 172 7 437 728 142 441 1.22e-47 185
Msa0128310 AT5G66310.2 36.646 322 180 9 444 756 66 372 3.65e-47 184
Msa0128310 AT5G66310.3 36.646 322 180 9 444 756 66 372 3.65e-47 184
Msa0128310 AT5G66310.1 36.646 322 180 9 444 756 66 372 3.65e-47 184
Msa0128310 AT3G51150.2 36.533 323 181 8 444 757 65 372 6.84e-47 183
Msa0128310 AT3G51150.4 36.533 323 181 8 444 757 65 372 6.84e-47 183
Msa0128310 AT3G51150.3 36.533 323 181 8 444 757 65 372 6.84e-47 183
Msa0128310 AT3G51150.1 36.533 323 181 8 444 757 65 372 6.86e-47 183
Msa0128310 AT3G10180.2 36.729 373 199 12 402 756 4 357 3.22e-46 181
Msa0128310 AT3G10180.1 36.729 373 199 12 402 756 4 357 3.92e-46 181
Msa0128310 AT4G39050.1 37.500 320 181 10 444 756 138 445 3.67e-45 177
Msa0128310 AT2G21380.2 36.562 320 184 10 444 756 144 451 4.85e-45 177
Msa0128310 AT2G21380.1 36.562 320 184 10 444 756 144 451 4.85e-45 177
Msa0128310 AT1G21730.1 35.185 378 216 12 397 762 71 431 1.23e-44 175
Msa0128310 AT5G06670.5 35.976 328 184 9 444 756 106 422 3.16e-44 172
Msa0128310 AT5G06670.8 35.976 328 184 9 444 756 106 422 4.38e-44 172
Msa0128310 AT5G06670.4 35.976 328 184 9 444 756 106 422 4.38e-44 172
Msa0128310 AT5G06670.7 35.976 328 184 9 444 756 106 422 4.38e-44 172
Msa0128310 AT5G06670.2 35.976 328 184 9 444 756 106 422 2.01e-43 172
Msa0128310 AT5G06670.3 35.976 328 184 9 444 756 106 422 2.01e-43 172
Msa0128310 AT5G06670.6 35.312 337 183 10 444 756 106 431 6.74e-42 167
Msa0128310 AT5G06670.1 35.312 337 183 10 444 756 106 431 6.74e-42 167
Msa0128310 AT1G01950.4 38.889 270 137 6 480 729 1 262 3.17e-41 163
Msa0128310 AT3G50240.3 36.246 309 159 10 484 757 3 308 5.17e-41 164
Msa0128310 AT3G12020.4 36.000 325 182 10 444 753 109 422 1.29e-40 162
Msa0128310 AT3G12020.1 36.000 325 182 10 444 753 109 422 1.29e-40 162
Msa0128310 AT3G12020.3 36.000 325 182 10 444 753 109 422 1.48e-40 163
Msa0128310 AT3G12020.2 36.000 325 182 10 444 753 109 422 1.48e-40 163
Msa0128310 AT1G59540.2 37.363 273 152 9 493 756 1 263 7.48e-38 152
Msa0128310 AT3G20150.2 34.091 352 195 13 443 767 134 475 2.16e-37 152
Msa0128310 AT3G20150.1 34.091 352 195 13 443 767 134 475 2.47e-37 152
Msa0128310 AT5G27950.2 39.669 242 128 6 500 729 4 239 2.30e-36 144
Msa0128310 AT3G16060.1 29.570 372 221 9 378 733 151 497 7.66e-35 143
Msa0128310 AT3G16630.2 29.972 357 212 10 394 728 186 526 4.40e-34 141
Msa0128310 AT3G16630.1 29.972 357 212 10 394 728 186 526 4.40e-34 141
Msa0128310 AT5G02370.1 31.579 342 191 9 401 724 20 336 2.15e-33 137
Msa0128310 AT5G42490.2 34.828 290 154 10 394 671 6 272 3.77e-32 136
Msa0128310 AT5G42490.1 34.828 290 154 10 394 671 6 272 4.27e-32 135
Msa0128310 AT4G14330.1 32.362 309 182 9 441 738 85 377 7.05e-32 134
Msa0128310 AT3G51150.5 38.916 203 116 4 563 757 17 219 3.15e-27 120
Msa0128310 AT5G65460.5 33.984 256 137 7 526 762 13 255 1.29e-26 118
Msa0128310 AT5G23910.2 26.471 306 200 9 430 734 44 325 1.58e-19 94.7
Msa0128310 AT5G23910.1 26.471 306 200 9 430 734 40 321 1.61e-19 94.7

Find 250 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTCACTATAGGATTTA+AGG 0.095452 1_3:-57975746 None:intergenic
TGAAAATGTTAGAAACTTTC+TGG 0.118054 1_3:+57975462 Msa0128310:CDS
AGCAAAGTATTTACCTAAAT+TGG 0.136829 1_3:-57977221 None:intergenic
TTGTTTAATCAGGAAGTATT+AGG 0.173618 1_3:+57977526 Msa0128310:intron
GCAGTCTAGTTCTCATTCTT+TGG 0.179747 1_3:+57976039 Msa0128310:intron
TATTTAACATTAGAGCTTTC+AGG 0.197880 1_3:+57980709 Msa0128310:three_prime_UTR
GGCTTAGCTCATGCTGCTTC+TGG 0.218020 1_3:+57977356 Msa0128310:CDS
TTCAACTTCAACAAAGTCTT+TGG 0.227045 1_3:+57977672 Msa0128310:CDS
ATCGGCTGCTACGGTCATTA+AGG 0.248332 1_3:-57978509 None:intergenic
CACGAGGAGTTCTCCAATTT+AGG 0.260528 1_3:+57977208 Msa0128310:CDS
AACAAATCTCTTTCAGCTTT+GGG 0.274588 1_3:+57978783 Msa0128310:CDS
TGTTGTATTTACACAGATAA+TGG 0.279167 1_3:+57980644 Msa0128310:three_prime_UTR
CGAGTAAGACCTTTCTTATC+TGG 0.281087 1_3:+57977558 Msa0128310:CDS
ACTGGAGCTGGTTGCCTTGT+TGG 0.285741 1_3:-57980422 None:intergenic
GCTAATGGTGTATGGAAATT+TGG 0.292995 1_3:+57975780 Msa0128310:CDS
CAGTCTAGTTCTCATTCTTT+GGG 0.293355 1_3:+57976040 Msa0128310:intron
AATTTAGAACATTCTATATC+TGG 0.297913 1_3:+57979302 Msa0128310:CDS
TAACAAATCTCTTTCAGCTT+TGG 0.302511 1_3:+57978782 Msa0128310:CDS
CAATGAAGTCCAGGATCTTA+AGG 0.313316 1_3:+57977415 Msa0128310:CDS
CTTAAGGGTAATAAGATTAC+TGG 0.318043 1_3:+57977431 Msa0128310:CDS
CTTGACAAAGAATTGGTAAA+TGG 0.318695 1_3:-57975858 None:intergenic
GGCAACCAGTTTAACATTGC+TGG 0.319385 1_3:+57979907 Msa0128310:CDS
TGATGTCGAGTCTAATAAAA+TGG 0.321854 1_3:+57975923 Msa0128310:CDS
CGCCCTTTCCCATTCTTTGA+GGG 0.330150 1_3:-57977642 None:intergenic
AAAGCCAAGGTGTAAATTAC+AGG 0.341060 1_3:+57978089 Msa0128310:CDS
AGGTAGGAATTCCAATTTCC+TGG 0.342578 1_3:-57975492 None:intergenic
CCAGTTTAACATTGCTGGTT+CGG 0.343097 1_3:+57979912 Msa0128310:CDS
CCATTTGTTTGTTTCCTTGA+AGG 0.345907 1_3:-57980383 None:intergenic
GCCTCTCATGAACATATTAT+AGG 0.347422 1_3:-57979887 None:intergenic
CATCAGAACATGACTTGCTT+TGG 0.348531 1_3:+57979971 Msa0128310:CDS
GGGTGTTGGGAAGCAGATAA+TGG 0.350245 1_3:+57979799 Msa0128310:CDS
TATAGTGAATGGAAACAAAC+TGG 0.351051 1_3:+57975756 Msa0128310:CDS
CTTACCGTAGGAACTTCTTC+TGG 0.354763 1_3:-57976097 None:intergenic
CCATTCACTATAGGATTTAA+GGG 0.356112 1_3:-57975745 None:intergenic
TTGAGTTCTTTGTCTCGATA+TGG 0.357001 1_3:-57979614 None:intergenic
AAAGACTTTGTTGAAGTTGA+AGG 0.358638 1_3:-57977670 None:intergenic
GACATCTGGAGCTGTCTTAC+GGG 0.363400 1_3:+57978671 Msa0128310:CDS
CAACTCCTTCCCACATGCTT+CGG 0.364129 1_3:-57974530 None:intergenic
CTGCCCCATCCTTGTTGACT+CGG 0.365037 1_3:-57979123 None:intergenic
AAACTTTCTGGTGGCTATCC+AGG 0.365478 1_3:+57975474 Msa0128310:CDS
AAAACTTACCAAGTGAATCT+TGG 0.366053 1_3:-57978878 None:intergenic
TGTTTAATCAGGAAGTATTA+GGG 0.366153 1_3:+57977527 Msa0128310:intron
CTGATATGCAGCCACTTGTT+AGG 0.366564 1_3:+57977807 Msa0128310:CDS
CTGGTGGCTATCCAGGAAAT+TGG 0.366578 1_3:+57975481 Msa0128310:CDS
GTTGACATGAAACGTAAAAC+TGG 0.370072 1_3:+57980443 Msa0128310:CDS
AGGAACAAACAAATAATAAA+AGG 0.370114 1_3:-57980524 None:intergenic
AGTTTGTTTCCATTCACTAT+AGG 0.370258 1_3:-57975754 None:intergenic
TCGTCTTAAAGATCTTGATT+TGG 0.370539 1_3:+57974994 Msa0128310:CDS
TTCTCCAACAGCATTGGCCT+CGG 0.372109 1_3:-57979044 None:intergenic
ACTATCTCTCTTTGTTGCTT+CGG 0.379839 1_3:-57974560 None:intergenic
GATTGATGTTGGCAACTTAG+AGG 0.384355 1_3:+57979430 Msa0128310:CDS
TTCTTGCCAATGCTGCCTTA+AGG 0.390471 1_3:-57979271 None:intergenic
CTACTGCTCCTTCACCTTCA+AGG 0.390953 1_3:+57980369 Msa0128310:CDS
TGTTCTTAACAAGGTTCATC+CGG 0.391884 1_3:+57975272 Msa0128310:CDS
CCGAACCAGCAATGTTAAAC+TGG 0.392287 1_3:-57979912 None:intergenic
GCGCCCTTTCCCATTCTTTG+AGG 0.394470 1_3:-57977643 None:intergenic
TGAGCAAGTCAGAGATCTAT+TGG 0.396757 1_3:+57978198 Msa0128310:CDS
CATTCTATATCTGGAAGCTC+TGG 0.416237 1_3:+57979311 Msa0128310:CDS
TCCACGGTACTCGAATGATT+TGG 0.419332 1_3:-57977585 None:intergenic
TGCTTGACTGTACATGTTCA+AGG 0.421405 1_3:+57978639 Msa0128310:CDS
AAATACTGAAAAGCAGATAA+TGG 0.421522 1_3:-57975439 None:intergenic
AGCCTTCTGAGGAAGAGTTT+AGG 0.424022 1_3:+57975217 Msa0128310:CDS
GCTTACGGCCAAACAGGATC+AGG 0.424727 1_3:+57977863 Msa0128310:CDS
CATGAACTGCATACCAGCTT+TGG 0.425873 1_3:-57977173 None:intergenic
ATTAATGTTCCCTCAAAGAA+TGG 0.427785 1_3:+57977633 Msa0128310:CDS
GCAGATAATGGCGCTCCATC+GGG 0.427834 1_3:-57975427 None:intergenic
ACAGTTGGTTGAATCTGTTT+TGG 0.428273 1_3:+57976548 Msa0128310:intron
AGAGGTCCTTGACAAAGAAT+TGG 0.435919 1_3:-57975865 None:intergenic
GTTTCAGATTGCCAGCCTTA+AGG 0.436181 1_3:+57979256 Msa0128310:intron
TGGTAACATGTTAGGGTGTT+GGG 0.437816 1_3:+57979786 Msa0128310:CDS
GTGAGTTTGCTATTTCTGTA+AGG 0.441257 1_3:-57978846 None:intergenic
AATGAAGTCCAGGATCTTAA+GGG 0.442261 1_3:+57977416 Msa0128310:CDS
CAAGGAAGAGACTTGACATC+TGG 0.442958 1_3:+57978657 Msa0128310:CDS
GAAGCAACAAAGAGAGATAG+TGG 0.446472 1_3:+57974562 Msa0128310:five_prime_UTR
CCCTTAAATCCTATAGTGAA+TGG 0.447079 1_3:+57975745 Msa0128310:CDS
TGACATCTGGAGCTGTCTTA+CGG 0.447398 1_3:+57978670 Msa0128310:CDS
ATATTTGCTTACGGCCAAAC+AGG 0.449662 1_3:+57977857 Msa0128310:CDS
TCTCCAACAGCATTGGCCTC+GGG 0.454242 1_3:-57979043 None:intergenic
ACCCTTTGATTCATGTCCGT+TGG 0.457390 1_3:-57980025 None:intergenic
AACAAGACTGGTAACATGTT+AGG 0.459081 1_3:+57979778 Msa0128310:CDS
CGTCAAAGAGCTCAAAGAAC+AGG 0.459647 1_3:+57979147 Msa0128310:CDS
CATTACAAGCCAAGATGAAC+TGG 0.460521 1_3:+57976599 Msa0128310:CDS
AGCAGATAATGGCGCTCCAT+CGG 0.461774 1_3:-57975428 None:intergenic
TCTTATTACCCTTAAGATCC+TGG 0.463135 1_3:-57977424 None:intergenic
GCCCGCTGGCTTGCATGATA+AGG 0.463420 1_3:-57979365 None:intergenic
AATTGGAATTCCTACCTTTG+AGG 0.464052 1_3:+57975498 Msa0128310:CDS
TGGAAACAAACTGGGGCTAA+TGG 0.464682 1_3:+57975765 Msa0128310:CDS
TCGGCTGCTACGGTCATTAA+GGG 0.465945 1_3:-57978508 None:intergenic
TCATGCCATGTACAAGCAAC+GGG 0.466768 1_3:-57980677 None:intergenic
AAATTTATGTCTTATATCCC+TGG 0.467256 1_3:+57980783 Msa0128310:three_prime_UTR
TACAGGAGAGTGGGTTGATA+AGG 0.467459 1_3:+57979732 Msa0128310:CDS
CTGGTAACATGTTAGGGTGT+TGG 0.468558 1_3:+57979785 Msa0128310:CDS
CGTTTCATGTCAACTGGAGC+TGG 0.468835 1_3:-57980434 None:intergenic
TTAGGCTTGGTTTGAGAAGT+GGG 0.471557 1_3:+57975235 Msa0128310:CDS
GGATCGTTCTGAGTATACTT+TGG 0.472506 1_3:-57979866 None:intergenic
GGTGTTGGGAAGCAGATAAT+GGG 0.474927 1_3:+57979800 Msa0128310:CDS
CCAGCGGGCTGCAGATATCA+TGG 0.475683 1_3:+57979379 Msa0128310:CDS
TCTTCCTCAGAAGGCTCTGC+TGG 0.476392 1_3:-57975210 None:intergenic
TGCCAATGCTGCCTTAAGGC+TGG 0.477104 1_3:-57979267 None:intergenic
TGCCAGCCTTAAGGCAGCAT+TGG 0.477178 1_3:+57979265 Msa0128310:CDS
GTTTGGAACATAGTGGGGTT+CGG 0.478080 1_3:+57974505 Msa0128310:five_prime_UTR
TTTATAGGCATGCACATTCA+CGG 0.478168 1_3:+57977335 Msa0128310:intron
GAACTGCATACCAGCTTTGG+TGG 0.479749 1_3:-57977170 None:intergenic
TCTGAGGAAGAGTTTAGGCT+TGG 0.480056 1_3:+57975222 Msa0128310:CDS
AGAGTGGGTTGATAAGGTTA+TGG 0.481612 1_3:+57979738 Msa0128310:CDS
GTGAACAAACATTAGTGTCT+TGG 0.482148 1_3:-57979014 None:intergenic
GATATCATGGATGATCCCTT+TGG 0.484586 1_3:+57979392 Msa0128310:CDS
TAAGGCAGCATTGGCAAGAA+AGG 0.485960 1_3:+57979274 Msa0128310:CDS
CACTGGTTGCCGGCATCCAA+AGG 0.486861 1_3:-57979408 None:intergenic
AGTATCATACCAGTTCATCT+TGG 0.487526 1_3:-57976608 None:intergenic
AGGAAACCGGTACAGGAGAG+TGG 0.489309 1_3:+57979722 Msa0128310:CDS
ACCTGTGAGATCGGCTGCTA+CGG 0.491250 1_3:-57978518 None:intergenic
AAACTGGGGCTAATGGTGTA+TGG 0.492107 1_3:+57975772 Msa0128310:CDS
CAACATCAATCACTGGTTGC+CGG 0.493007 1_3:-57979418 None:intergenic
GGGATTAGTGCAGAATCAAC+AGG 0.493427 1_3:-57975406 None:intergenic
TGTTATTGAACTAATGAACT+TGG 0.493700 1_3:+57978455 Msa0128310:CDS
TTAAGAAGATATGAAGCAGC+AGG 0.495720 1_3:+57975144 Msa0128310:CDS
AATGTTTGCATATTTGCTTA+CGG 0.497791 1_3:+57977848 Msa0128310:CDS
GTATGAAAGAGGATGATGTT+TGG 0.499520 1_3:+57974488 None:intergenic
AAGAGAGATAGTGGGAGGAG+AGG 0.499752 1_3:+57974571 Msa0128310:five_prime_UTR
CTTGTTAGGTCTGTGCTCGA+TGG 0.501110 1_3:+57977821 Msa0128310:CDS
TGCCCCATCCTTGTTGACTC+GGG 0.501518 1_3:-57979122 None:intergenic
ACTTGAACAAGGCTTGCATC+TGG 0.501874 1_3:-57978417 None:intergenic
TGGATGATCCCTTTGGATGC+CGG 0.503861 1_3:+57979399 Msa0128310:CDS
TATTTCTGTAAGGGACATGT+TGG 0.504849 1_3:-57978836 None:intergenic
GCTGCCCGAGTCAACAAGGA+TGG 0.505773 1_3:+57979118 Msa0128310:CDS
AATTGTTTCTCCAACAGCAT+TGG 0.507069 1_3:-57979050 None:intergenic
AAGGATTGTGAGTAGTGTAT+TGG 0.507645 1_3:+57975722 Msa0128310:CDS
TTTAGGCTTGGTTTGAGAAG+TGG 0.507792 1_3:+57975234 Msa0128310:CDS
ATGCATCTCGTTGACTTGGC+AGG 0.508762 1_3:+57978699 Msa0128310:CDS
AAATTGTGTGGAAGACGATA+AGG 0.509546 1_3:+57979702 Msa0128310:CDS
TTAATGTTCCCTCAAAGAAT+GGG 0.510130 1_3:+57977634 Msa0128310:CDS
GATGATGTTTGGAACATAGT+GGG 0.512689 1_3:+57974499 Msa0128310:five_prime_UTR
CCTTCAAGGAAACAAACAAA+TGG 0.513212 1_3:+57980383 Msa0128310:CDS
TTCAGTGGCATCTGTTGTTG+AGG 0.514852 1_3:+57974949 Msa0128310:CDS
TAATGCCCGTTGCTTGTACA+TGG 0.516093 1_3:+57980672 Msa0128310:three_prime_UTR
CCATGATATCTGCAGCCCGC+TGG 0.516277 1_3:-57979379 None:intergenic
TTATACAGCGAATCAAAGAA+AGG 0.518620 1_3:+57978129 Msa0128310:CDS
TCCTATGGTAACAAAGAAAG+AGG 0.521036 1_3:+57976940 Msa0128310:CDS
ATCAACCCACTCTCCTGTAC+CGG 0.523615 1_3:-57979728 None:intergenic
GGATGATGTTTGGAACATAG+TGG 0.524459 1_3:+57974498 Msa0128310:five_prime_UTR
TGGGATAACTTCAGGAGGAC+AGG 0.526345 1_3:+57978991 Msa0128310:intron
CTGCCCGAGTCAACAAGGAT+GGG 0.526826 1_3:+57979119 Msa0128310:CDS
CGAAGCATGTGGGAAGGAGT+TGG 0.528965 1_3:+57974531 Msa0128310:five_prime_UTR
GTTTGTTTCCTTGAAGGTGA+AGG 0.529317 1_3:-57980377 None:intergenic
ACAAGACTGGTAACATGTTA+GGG 0.529408 1_3:+57979779 Msa0128310:CDS
AGGATATACACCTGTGAGAT+CGG 0.531914 1_3:-57978527 None:intergenic
GTCATGTTCTGATGAATCAC+TGG 0.532004 1_3:-57979962 None:intergenic
TCCTCTTTCTTTGTTACCAT+AGG 0.533041 1_3:-57976941 None:intergenic
ATGCATGCATCTCGTTGACT+TGG 0.535190 1_3:+57978695 Msa0128310:CDS
ACAGTTCAAACCACCAAAGC+TGG 0.535967 1_3:+57977160 Msa0128310:CDS
CTGGAAGCTCTGGAAAATGT+AGG 0.537051 1_3:+57979321 Msa0128310:CDS
ACCTTATCATGCAAGCCAGC+GGG 0.537523 1_3:+57979364 Msa0128310:CDS
TTCTAGATCAGATGCCTCAA+AGG 0.539627 1_3:-57975512 None:intergenic
GTGGAAGACGATAAGGAAAC+CGG 0.539726 1_3:+57979709 Msa0128310:CDS
TTTAGGGAGGAAAATCATCA+AGG 0.539794 1_3:+57975703 Msa0128310:intron
CAATTACTCCAAGATTCACT+TGG 0.541197 1_3:+57978870 Msa0128310:CDS
GGGCTGTTGCTCCGACTGCA+CGG 0.542943 1_3:-57978488 None:intergenic
CAGCTAAAAGCACAGAATTG+AGG 0.543524 1_3:+57980067 Msa0128310:CDS
AGAGATCTATTGGTTACTGA+TGG 0.546337 1_3:+57978208 Msa0128310:CDS
AGTGAAATGTCTCAAAGAGA+TGG 0.547324 1_3:+57976777 Msa0128310:CDS
CAAAGAATTGGTAAATGGCT+CGG 0.551364 1_3:-57975853 None:intergenic
TTCCCTCAAAGAATGGGAAA+GGG 0.552087 1_3:+57977640 Msa0128310:CDS
AGTCCCGAGGCCAATGCTGT+TGG 0.554966 1_3:+57979040 Msa0128310:CDS
GTCATGCCATGTACAAGCAA+CGG 0.555428 1_3:-57980678 None:intergenic
GGTGGATAACAAGATTCCTA+TGG 0.557286 1_3:+57976925 Msa0128310:intron
ACTGGTTGCCGGCATCCAAA+GGG 0.557291 1_3:-57979407 None:intergenic
AAGTTAGATGTGAACAAGAC+TGG 0.557708 1_3:+57979766 Msa0128310:CDS
TCTAGAAAATCAGAAGAAGC+TGG 0.560090 1_3:+57975019 Msa0128310:CDS
AGAGTTGCTACAGTTGAACT+TGG 0.560508 1_3:+57979094 Msa0128310:CDS
GGTCGACAAATCTGAGGCGA+CGG 0.560580 1_3:+57978731 Msa0128310:CDS
TGAGTTTGCTATTTCTGTAA+GGG 0.560724 1_3:-57978845 None:intergenic
GTTCTTAACAAGGTTCATCC+GGG 0.561305 1_3:+57975273 Msa0128310:CDS
GACGATAAGGAAACCGGTAC+AGG 0.562544 1_3:+57979715 Msa0128310:CDS
GTTCCCTCAAAGAATGGGAA+AGG 0.565328 1_3:+57977639 Msa0128310:CDS
GTCGACAAATCTGAGGCGAC+GGG 0.565704 1_3:+57978732 Msa0128310:CDS
CATTTACCAATTCTTTGTCA+AGG 0.566014 1_3:+57975859 Msa0128310:CDS
AAGTTGCCAACATCAATCAC+TGG 0.567692 1_3:-57979425 None:intergenic
TTTGGTTGTCCAGATAAGAA+AGG 0.569317 1_3:-57977567 None:intergenic
AGCCAACGGACATGAATCAA+AGG 0.569973 1_3:+57980023 Msa0128310:CDS
GCAGCATTGGCAAGAAAGGA+AGG 0.570071 1_3:+57979278 Msa0128310:CDS
TTTGGACCATCTGCAGCCCA+AGG 0.571127 1_3:+57977690 Msa0128310:CDS
ACCGTAGCAGCCGATCTCAC+AGG 0.572158 1_3:+57978517 Msa0128310:CDS
AACCAACCTTGGGCTGCAGA+TGG 0.574279 1_3:-57977696 None:intergenic
TCTTTGTAATGTTCTTAACA+AGG 0.574812 1_3:+57975263 Msa0128310:CDS
GAGCCCTGTAATTTACACCT+TGG 0.575443 1_3:-57978093 None:intergenic
AGCAAATGCTCTTTGATCAA+CGG 0.575718 1_3:+57977020 Msa0128310:CDS
GGGTTCGGAACCGAAGCATG+TGG 0.581338 1_3:+57974520 Msa0128310:five_prime_UTR
TGCCCGAGTCAACAAGGATG+GGG 0.582451 1_3:+57979120 Msa0128310:CDS
CAAACTATACAATGAAGTCC+AGG 0.588403 1_3:+57977406 Msa0128310:CDS
AATGGTGTATGGAAATTTGG+TGG 0.588838 1_3:+57975783 Msa0128310:CDS
GACGGGCGATAGATTGAAAG+AGG 0.592922 1_3:+57978749 Msa0128310:CDS
CACCTTATCATGCAAGCCAG+CGG 0.593447 1_3:+57979363 Msa0128310:CDS
TTGACTTGGCAGGAAGTGAG+AGG 0.593669 1_3:+57978709 Msa0128310:CDS
GCCAACGGACATGAATCAAA+GGG 0.594270 1_3:+57980024 Msa0128310:CDS
AGCCTAAACTCTTCCTCAGA+AGG 0.596157 1_3:-57975219 None:intergenic
GTGACTCCTCGTCAGCAACA+TGG 0.598453 1_3:-57976979 None:intergenic
TTTGAACAAGACTATTCACT+GGG 0.599721 1_3:-57979681 None:intergenic
AGATCAGATGCCTCAAAGGT+AGG 0.602073 1_3:-57975508 None:intergenic
GTAGGACAGCGGCTAGTGAA+CGG 0.606275 1_3:+57979339 Msa0128310:CDS
TTCGTAGTAACTCTCAAAGA+GGG 0.606354 1_3:+57978385 Msa0128310:CDS
ATAGTGAATGGAAACAAACT+GGG 0.606384 1_3:+57975757 Msa0128310:CDS
GTCACCTTGGATACAGAACC+CGG 0.607742 1_3:-57975291 None:intergenic
CGGCAACCAGTGATTGATGT+TGG 0.608755 1_3:+57979419 Msa0128310:CDS
GAAGCCAGAAGAAGTTCCTA+CGG 0.609122 1_3:+57976093 Msa0128310:CDS
TCCTATAATATGTTCATGAG+AGG 0.612800 1_3:+57979886 Msa0128310:CDS
AAATGTTAGAAACTTTCTGG+TGG 0.614047 1_3:+57975465 Msa0128310:CDS
TTTATTAGACTCGACATCAG+AGG 0.616146 1_3:-57975919 None:intergenic
AAGCCAAGGTGTAAATTACA+GGG 0.618780 1_3:+57978090 Msa0128310:CDS
TGGTGCTGCCCGAGTCAACA+AGG 0.620113 1_3:+57979114 Msa0128310:CDS
TTTACCAGCAGAGCCTTCTG+AGG 0.621122 1_3:+57975206 Msa0128310:CDS
ACCGTGGAGAACATAGAAGA+TGG 0.621354 1_3:+57977600 Msa0128310:CDS
GGAAACCGGTACAGGAGAGT+GGG 0.621777 1_3:+57979723 Msa0128310:CDS
TCATCCGGGTTCTGTATCCA+AGG 0.624192 1_3:+57975287 Msa0128310:CDS
GGTCATAAGAACCGTGCAGT+CGG 0.625242 1_3:+57978477 Msa0128310:CDS
GGTAGCAGCATCAACATCAT+CGG 0.626833 1_3:-57979941 None:intergenic
GTTATTGAACTAATGAACTT+GGG 0.629233 1_3:+57978456 Msa0128310:CDS
ATTCGTAGTAACTCTCAAAG+AGG 0.631495 1_3:+57978384 Msa0128310:CDS
GATTCTGCACTAATCCCCGA+TGG 0.632933 1_3:+57975412 Msa0128310:CDS
TAGTCTTGTTCAAAATTGTG+TGG 0.633315 1_3:+57979690 Msa0128310:CDS
ACCATCTTCTATGTTCTCCA+CGG 0.634195 1_3:-57977601 None:intergenic
GTTTGTTCACATTAGTCCCG+AGG 0.634780 1_3:+57979027 Msa0128310:CDS
CGGAACCGAAGCATGTGGGA+AGG 0.635189 1_3:+57974525 Msa0128310:five_prime_UTR
CATGCAAATGAAATTTCACG+AGG 0.647135 1_3:+57977192 Msa0128310:CDS
TGAGAGGGTCGACAAATCTG+AGG 0.647349 1_3:+57978725 Msa0128310:CDS
TTGTTGATGATACTTGAACA+AGG 0.647374 1_3:-57978428 None:intergenic
TCGAGCACAGACCTAACAAG+TGG 0.649204 1_3:-57977818 None:intergenic
AAGCAACAAAGAGAGATAGT+GGG 0.649294 1_3:+57974563 Msa0128310:five_prime_UTR
GTGTACAGAGCAAAAGCCAA+AGG 0.650308 1_3:+57974646 Msa0128310:five_prime_UTR
ACATCTGGAGCTGTCTTACG+GGG 0.650405 1_3:+57978672 Msa0128310:CDS
TTGACATGAAACGTAAAACT+GGG 0.651208 1_3:+57980444 Msa0128310:CDS
TGAACAAGACTATTCACTGG+GGG 0.651920 1_3:-57979679 None:intergenic
GAGGATGTTCTTCAACAGCA+TGG 0.652965 1_3:+57974968 Msa0128310:CDS
CAACAAAGAGAGATAGTGGG+AGG 0.654842 1_3:+57974566 Msa0128310:five_prime_UTR
ATGATGTTTGGAACATAGTG+GGG 0.657605 1_3:+57974500 Msa0128310:five_prime_UTR
ACGGACATGAATCAAAGGGT+AGG 0.658106 1_3:+57980028 Msa0128310:CDS
TGACTTGGCAGGAAGTGAGA+GGG 0.658596 1_3:+57978710 Msa0128310:CDS
AGATAATGGGAACTTATCTG+AGG 0.660079 1_3:+57979813 Msa0128310:CDS
CAGATAATGGCGCTCCATCG+GGG 0.660924 1_3:-57975426 None:intergenic
AAAGTTACAAGCGTAGCCAA+CGG 0.665101 1_3:+57980009 Msa0128310:CDS
CTCTGGAAAATGTAGGACAG+CGG 0.675648 1_3:+57979328 Msa0128310:CDS
GGTTCGGAACCGAAGCATGT+GGG 0.676772 1_3:+57974521 Msa0128310:five_prime_UTR
ACCAAATCATTCGAGTACCG+TGG 0.683949 1_3:+57977584 Msa0128310:CDS
TAAGAAGATATGAAGCAGCA+GGG 0.688225 1_3:+57975145 Msa0128310:CDS
TCGCACATCGAACACCAACA+AGG 0.688670 1_3:+57980408 Msa0128310:CDS
CATTAACAAATTCACCACCC+TGG 0.700253 1_3:+57979656 Msa0128310:CDS
TAGTGAATGGAAACAAACTG+GGG 0.713604 1_3:+57975758 Msa0128310:CDS
GAAGATATGAAGCAGCAGGG+TGG 0.738522 1_3:+57975148 Msa0128310:CDS
TTGCTGACGAGGAGTCACAG+AGG 0.755516 1_3:+57976984 Msa0128310:CDS
TTGAACAAGACTATTCACTG+GGG 0.770387 1_3:-57979680 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAAAAATGATATCTTA+TGG + chr1_3:57979499-57979518 Msa0128310:intron 10.0%
!!! ATTTACTATGAATGATTTTT+TGG + chr1_3:57975329-57975348 Msa0128310:intron 15.0%
!!! TAAATTCTGTATTTTCTTTA+AGG + chr1_3:57975372-57975391 Msa0128310:intron 15.0%
!! TTTATGCCAATATAATATTA+AGG + chr1_3:57977497-57977516 Msa0128310:intron 15.0%
!! AGTTAACCTTAATATTATAT+TGG - chr1_3:57977506-57977525 None:intergenic 15.0%
!!! ATTTTAATGTAACAACTAAA+AGG - chr1_3:57978250-57978269 None:intergenic 15.0%
!! TGACTTCTTTAATATTTATT+TGG + chr1_3:57978612-57978631 Msa0128310:intron 15.0%
!!! GATATCATTTTTTAAAATCA+GGG - chr1_3:57979496-57979515 None:intergenic 15.0%
!!! AGATATCATTTTTTAAAATC+AGG - chr1_3:57979497-57979516 None:intergenic 15.0%
!!! TATCTTATGGAAATTTTATT+TGG + chr1_3:57979512-57979531 Msa0128310:intron 15.0%
!! TATTTCTTATTGATATCTTA+TGG + chr1_3:57979556-57979575 Msa0128310:intron 15.0%
!!! AATCATATATATTTTTTTGC+TGG + chr1_3:57980594-57980613 Msa0128310:three_prime_UTR 15.0%
!!! ATCATATATATTTTTTTGCT+GGG + chr1_3:57980595-57980614 Msa0128310:three_prime_UTR 15.0%
!!! ATTTTCATGTGAAATGTAAA+AGG + chr1_3:57975081-57975100 Msa0128310:intron 20.0%
!! TTTGAGTATAAAATGTATCA+TGG + chr1_3:57975577-57975596 Msa0128310:intron 20.0%
!! ATTATCTGATGTTGTATTAT+TGG - chr1_3:57975615-57975634 None:intergenic 20.0%
!! ATAATACAACATCAGATAAT+TGG + chr1_3:57975615-57975634 Msa0128310:intron 20.0%
!! TAATACAACATCAGATAATT+GGG + chr1_3:57975616-57975635 Msa0128310:intron 20.0%
!!! TGTAATTGATTCATGTTTTT+AGG + chr1_3:57975686-57975705 Msa0128310:intron 20.0%
!!! GTAATTGATTCATGTTTTTA+GGG + chr1_3:57975687-57975706 Msa0128310:intron 20.0%
!! GGTTTAAGAGTTTAATTAAA+CGG - chr1_3:57976213-57976232 None:intergenic 20.0%
!! ATTATTGTGCATCTAAAAAT+TGG + chr1_3:57976290-57976309 Msa0128310:intron 20.0%
!! AAATAACACTTAATAGCTAA+TGG - chr1_3:57976652-57976671 None:intergenic 20.0%
!! CTAAGAATTGAGTAAAATAA+TGG - chr1_3:57976679-57976698 None:intergenic 20.0%
!!! CATTATTTTACTCAATTCTT+AGG + chr1_3:57976677-57976696 Msa0128310:intron 20.0%
!!! TTTCTATTCGTGATTTTTTA+AGG + chr1_3:57977472-57977491 Msa0128310:intron 20.0%
!! AATTGTCATCAAAATATTCA+AGG - chr1_3:57978017-57978036 None:intergenic 20.0%
!!! TGATATTTGTTTCTAAATAC+TGG + chr1_3:57978297-57978316 Msa0128310:intron 20.0%
!!! AATTTAGAACATTCTATATC+TGG + chr1_3:57979302-57979321 Msa0128310:CDS 20.0%
!!! ATCTTATGGATATTTTAAAC+TGG + chr1_3:57979570-57979589 Msa0128310:intron 20.0%
!!! TTCTTGTTAAGCATTTTAAA+AGG + chr1_3:57980488-57980507 Msa0128310:three_prime_UTR 20.0%
!!! TCTTGTTAAGCATTTTAAAA+GGG + chr1_3:57980489-57980508 Msa0128310:three_prime_UTR 20.0%
!! AGGAACAAACAAATAATAAA+AGG - chr1_3:57980527-57980546 None:intergenic 20.0%
! AAGCAGATACAAAAAGAAAA+AGG + chr1_3:57974605-57974624 Msa0128310:five_prime_UTR 25.0%
! ATACAAAAAGAAAAAGGAAG+AGG + chr1_3:57974611-57974630 Msa0128310:five_prime_UTR 25.0%
! ATGTTATGTTATGTTACCTT+TGG - chr1_3:57974665-57974684 None:intergenic 25.0%
!! CTTTCTCTTTATTTCTTCTT+TGG + chr1_3:57974811-57974830 Msa0128310:intron 25.0%
! TAAACTTTGTCTTTAGTTGA+AGG + chr1_3:57974854-57974873 Msa0128310:intron 25.0%
! AGGATTAAGAAGAATTTAAG+AGG + chr1_3:57974874-57974893 Msa0128310:intron 25.0%
!!! GTTACATTGTTGTTTTGTTT+TGG + chr1_3:57974896-57974915 Msa0128310:intron 25.0%
!!! TTTTGGTTAGTTGTTTGTTA+TGG + chr1_3:57974913-57974932 Msa0128310:intron 25.0%
!! TATCATTTTCTCTCTGATAT+TGG + chr1_3:57975049-57975068 Msa0128310:intron 25.0%
! TCTTTGTAATGTTCTTAACA+AGG + chr1_3:57975263-57975282 Msa0128310:CDS 25.0%
! AGTAAATCAAATCAAGACTA+TGG - chr1_3:57975316-57975335 None:intergenic 25.0%
! AAATACTGAAAAGCAGATAA+TGG - chr1_3:57975442-57975461 None:intergenic 25.0%
! TGAAAATGTTAGAAACTTTC+TGG + chr1_3:57975462-57975481 Msa0128310:CDS 25.0%
!!! AGTTCAATAAATGTTGACTT+TGG + chr1_3:57975653-57975672 Msa0128310:intron 25.0%
! ATCAAATACAAAACCCTATT+TGG + chr1_3:57976182-57976201 Msa0128310:intron 25.0%
! TTAAACGGTTTATCCAAATA+GGG - chr1_3:57976198-57976217 None:intergenic 25.0%
! ATTAAACGGTTTATCCAAAT+AGG - chr1_3:57976199-57976218 None:intergenic 25.0%
!! GTATCTAAAACAGTCATTAA+GGG + chr1_3:57976317-57976336 Msa0128310:intron 25.0%
!! TATCTAAAACAGTCATTAAG+GGG + chr1_3:57976318-57976337 Msa0128310:intron 25.0%
! AATAACCAATTCTGCATTTA+GGG - chr1_3:57976400-57976419 None:intergenic 25.0%
!! CTTTAAGAAAGTAATCTCAA+AGG - chr1_3:57976506-57976525 None:intergenic 25.0%
!! AGCAAAGTATTTACCTAAAT+TGG - chr1_3:57977224-57977243 None:intergenic 25.0%
! GTGAAAACTAAAATATGATG+AGG - chr1_3:57977310-57977329 None:intergenic 25.0%
!! AAGGTTAACTTTGTTTAATC+AGG + chr1_3:57977516-57977535 Msa0128310:intron 25.0%
!!! TTGTTTAATCAGGAAGTATT+AGG + chr1_3:57977526-57977545 Msa0128310:intron 25.0%
!!! TGTTTAATCAGGAAGTATTA+GGG + chr1_3:57977527-57977546 Msa0128310:intron 25.0%
! CTAAAATATAGTAATCTTGC+AGG - chr1_3:57977742-57977761 None:intergenic 25.0%
!!! ATTTTTTGTCTATTGTGTTC+AGG + chr1_3:57977773-57977792 Msa0128310:intron 25.0%
!!! TTTTTTGTCTATTGTGTTCA+GGG + chr1_3:57977774-57977793 Msa0128310:intron 25.0%
! AATGTTTGCATATTTGCTTA+CGG + chr1_3:57977848-57977867 Msa0128310:CDS 25.0%
!! AATTTTGTTGAAATGCAGAA+CGG + chr1_3:57977953-57977972 Msa0128310:intron 25.0%
! TCTAATGTATGAATGGTTAA+GGG - chr1_3:57978363-57978382 None:intergenic 25.0%
! TTCTAATGTATGAATGGTTA+AGG - chr1_3:57978364-57978383 None:intergenic 25.0%
! ACGAATTTCTAATGTATGAA+TGG - chr1_3:57978370-57978389 None:intergenic 25.0%
! TGTTATTGAACTAATGAACT+TGG + chr1_3:57978455-57978474 Msa0128310:CDS 25.0%
! GTTATTGAACTAATGAACTT+GGG + chr1_3:57978456-57978475 Msa0128310:CDS 25.0%
! TGATAGAATTGTATAACTGA+GGG - chr1_3:57978946-57978965 None:intergenic 25.0%
! ATGATAGAATTGTATAACTG+AGG - chr1_3:57978947-57978966 None:intergenic 25.0%
!!! TGTTTTTCATTATGTTGCTT+GGG + chr1_3:57978972-57978991 Msa0128310:intron 25.0%
! TAAGACTATTATGAAGAACT+AGG - chr1_3:57979194-57979213 None:intergenic 25.0%
! AGATATCAATAAGAAATAGC+CGG - chr1_3:57979554-57979573 None:intergenic 25.0%
! TGTTGTATTTACACAGATAA+TGG + chr1_3:57980644-57980663 Msa0128310:three_prime_UTR 25.0%
! TATTTAACATTAGAGCTTTC+AGG + chr1_3:57980709-57980728 Msa0128310:three_prime_UTR 25.0%
TCTCTCTATGATCTTATAGT+TGG - chr1_3:57974742-57974761 None:intergenic 30.0%
TCGTCTTAAAGATCTTGATT+TGG + chr1_3:57974994-57975013 Msa0128310:CDS 30.0%
!!! CTGTATTTTCTTTAAGGTTG+TGG + chr1_3:57975378-57975397 Msa0128310:intron 30.0%
AAATGTTAGAAACTTTCTGG+TGG + chr1_3:57975465-57975484 Msa0128310:CDS 30.0%
! GATCTAGAACAAGTATGTAA+AGG + chr1_3:57975526-57975545 Msa0128310:intron 30.0%
!!! ATTGATTCATGTTTTTAGGG+AGG + chr1_3:57975690-57975709 Msa0128310:intron 30.0%
CCATTCACTATAGGATTTAA+GGG - chr1_3:57975748-57975767 None:intergenic 30.0%
TCCATTCACTATAGGATTTA+AGG - chr1_3:57975749-57975768 None:intergenic 30.0%
! AGTTTGTTTCCATTCACTAT+AGG - chr1_3:57975757-57975776 None:intergenic 30.0%
TATAGTGAATGGAAACAAAC+TGG + chr1_3:57975756-57975775 Msa0128310:CDS 30.0%
ATAGTGAATGGAAACAAACT+GGG + chr1_3:57975757-57975776 Msa0128310:CDS 30.0%
CTTGACAAAGAATTGGTAAA+TGG - chr1_3:57975861-57975880 None:intergenic 30.0%
CATTTACCAATTCTTTGTCA+AGG + chr1_3:57975859-57975878 Msa0128310:CDS 30.0%
! AGATTTTTCATTGATGGAAG+AGG - chr1_3:57975886-57975905 None:intergenic 30.0%
! AGTCACAGATTTTTCATTGA+TGG - chr1_3:57975892-57975911 None:intergenic 30.0%
TGATGTCGAGTCTAATAAAA+TGG + chr1_3:57975923-57975942 Msa0128310:CDS 30.0%
! TATGTGCTATGATTTTGTCT+AGG + chr1_3:57975973-57975992 Msa0128310:intron 30.0%
AGCTTATACATAAGCACTTA+TGG - chr1_3:57976234-57976253 None:intergenic 30.0%
! GGTATCTAAAACAGTCATTA+AGG + chr1_3:57976316-57976335 Msa0128310:intron 30.0%
CAATAACCAATTCTGCATTT+AGG - chr1_3:57976401-57976420 None:intergenic 30.0%
AGTAATATTGTTCTTCTGCA+TGG + chr1_3:57976524-57976543 Msa0128310:intron 30.0%
TAGCTAATGGCATTACTTAA+AGG - chr1_3:57976639-57976658 None:intergenic 30.0%
AATGCTTGATTCTTATACTG+TGG + chr1_3:57976888-57976907 Msa0128310:intron 30.0%
TTGTTATCCACCTAATCAAT+CGG - chr1_3:57976917-57976936 None:intergenic 30.0%
TCCTACAAAAAACACAAAGA+TGG - chr1_3:57977130-57977149 None:intergenic 30.0%
! TAGTTTTCACCTCTCTTTAT+AGG + chr1_3:57977320-57977339 Msa0128310:intron 30.0%
CTTAAGGGTAATAAGATTAC+TGG + chr1_3:57977431-57977450 Msa0128310:CDS 30.0%
ATTAATGTTCCCTCAAAGAA+TGG + chr1_3:57977633-57977652 Msa0128310:CDS 30.0%
TTAATGTTCCCTCAAAGAAT+GGG + chr1_3:57977634-57977653 Msa0128310:CDS 30.0%
AAAGACTTTGTTGAAGTTGA+AGG - chr1_3:57977673-57977692 None:intergenic 30.0%
TTCAACTTCAACAAAGTCTT+TGG + chr1_3:57977672-57977691 Msa0128310:CDS 30.0%
! TTTTTGTCTATTGTGTTCAG+GGG + chr1_3:57977775-57977794 Msa0128310:intron 30.0%
! AGAACGGACTTAAAAAACAA+TGG + chr1_3:57977969-57977988 Msa0128310:intron 30.0%
! TTCGTATTTGAAATGTAGAC+TGG + chr1_3:57978046-57978065 Msa0128310:intron 30.0%
!!! CTTTTTTCTGTGATCTCTTT+TGG - chr1_3:57978073-57978092 None:intergenic 30.0%
TTATACAGCGAATCAAAGAA+AGG + chr1_3:57978129-57978148 Msa0128310:CDS 30.0%
ACAATGAAAACAGCCTTTAT+TGG + chr1_3:57978328-57978347 Msa0128310:intron 30.0%
!! TTGTTGATGATACTTGAACA+AGG - chr1_3:57978431-57978450 None:intergenic 30.0%
TGGATAACAGGACAATAAAT+AGG - chr1_3:57978550-57978569 None:intergenic 30.0%
AAATGTCACAAAAACAGTTG+TGG - chr1_3:57978570-57978589 None:intergenic 30.0%
TAACAAATCTCTTTCAGCTT+TGG + chr1_3:57978782-57978801 Msa0128310:CDS 30.0%
AACAAATCTCTTTCAGCTTT+GGG + chr1_3:57978783-57978802 Msa0128310:CDS 30.0%
!! TGAGTTTGCTATTTCTGTAA+GGG - chr1_3:57978848-57978867 None:intergenic 30.0%
AAAACTTACCAAGTGAATCT+TGG - chr1_3:57978881-57978900 None:intergenic 30.0%
!!! TCACTTGGTAAGTTTTAAGT+TGG + chr1_3:57978885-57978904 Msa0128310:intron 30.0%
! GTGTTTTTCATTATGTTGCT+TGG + chr1_3:57978971-57978990 Msa0128310:intron 30.0%
!! TTTTATTTGGATGATCCCTT+TGG + chr1_3:57979525-57979544 Msa0128310:intron 30.0%
TTTGAACAAGACTATTCACT+GGG - chr1_3:57979684-57979703 None:intergenic 30.0%
! TTTTGAACAAGACTATTCAC+TGG - chr1_3:57979685-57979704 None:intergenic 30.0%
!! TAGTCTTGTTCAAAATTGTG+TGG + chr1_3:57979690-57979709 Msa0128310:CDS 30.0%
TCCTATAATATGTTCATGAG+AGG + chr1_3:57979886-57979905 Msa0128310:CDS 30.0%
ATGTTCAAAATTGTATGCAC+AGG - chr1_3:57980289-57980308 None:intergenic 30.0%
TTGACATGAAACGTAAAACT+GGG + chr1_3:57980444-57980463 Msa0128310:CDS 30.0%
CTCGAACTAAAAAATTGTGA+AGG - chr1_3:57980547-57980566 None:intergenic 30.0%
!!! CTTCACAATTTTTTAGTTCG+AGG + chr1_3:57980545-57980564 Msa0128310:three_prime_UTR 30.0%
! GATGATGTTTGGAACATAGT+GGG + chr1_3:57974499-57974518 Msa0128310:five_prime_UTR 35.0%
! ATGATGTTTGGAACATAGTG+GGG + chr1_3:57974500-57974519 Msa0128310:five_prime_UTR 35.0%
! ACTATCTCTCTTTGTTGCTT+CGG - chr1_3:57974563-57974582 None:intergenic 35.0%
AAGCAACAAAGAGAGATAGT+GGG + chr1_3:57974563-57974582 Msa0128310:five_prime_UTR 35.0%
TCTAGAAAATCAGAAGAAGC+TGG + chr1_3:57975019-57975038 Msa0128310:CDS 35.0%
TTAAGAAGATATGAAGCAGC+AGG + chr1_3:57975144-57975163 Msa0128310:CDS 35.0%
TAAGAAGATATGAAGCAGCA+GGG + chr1_3:57975145-57975164 Msa0128310:CDS 35.0%
TGTTCTTAACAAGGTTCATC+CGG + chr1_3:57975272-57975291 Msa0128310:CDS 35.0%
AATTGGAATTCCTACCTTTG+AGG + chr1_3:57975498-57975517 Msa0128310:CDS 35.0%
TTTAGGGAGGAAAATCATCA+AGG + chr1_3:57975703-57975722 Msa0128310:intron 35.0%
AAGGATTGTGAGTAGTGTAT+TGG + chr1_3:57975722-57975741 Msa0128310:CDS 35.0%
CCCTTAAATCCTATAGTGAA+TGG + chr1_3:57975745-57975764 Msa0128310:CDS 35.0%
TAGTGAATGGAAACAAACTG+GGG + chr1_3:57975758-57975777 Msa0128310:CDS 35.0%
GCTAATGGTGTATGGAAATT+TGG + chr1_3:57975780-57975799 Msa0128310:CDS 35.0%
AATGGTGTATGGAAATTTGG+TGG + chr1_3:57975783-57975802 Msa0128310:CDS 35.0%
! AAAGATTTTGCAGTGATTGC+TGG - chr1_3:57975819-57975838 None:intergenic 35.0%
CAAAGAATTGGTAAATGGCT+CGG - chr1_3:57975856-57975875 None:intergenic 35.0%
TTTATTAGACTCGACATCAG+AGG - chr1_3:57975922-57975941 None:intergenic 35.0%
GTCGAGTCTAATAAAATGGT+TGG + chr1_3:57975927-57975946 Msa0128310:intron 35.0%
! ATGATTTTGTCTAGGTGAGA+AGG + chr1_3:57975981-57976000 Msa0128310:intron 35.0%
!! CAGTCTAGTTCTCATTCTTT+GGG + chr1_3:57976040-57976059 Msa0128310:intron 35.0%
! TGTTCTTTTGTGTCTCACAT+AGG + chr1_3:57976133-57976152 Msa0128310:intron 35.0%
TGTGCATCTAAAAATTGGAC+AGG + chr1_3:57976295-57976314 Msa0128310:intron 35.0%
!!! TCTCTTCCTTTTAGTTTCTG+TGG + chr1_3:57976341-57976360 Msa0128310:intron 35.0%
AAATGGCCACAGAAACTAAA+AGG - chr1_3:57976350-57976369 None:intergenic 35.0%
! ACAGTTGGTTGAATCTGTTT+TGG + chr1_3:57976548-57976567 Msa0128310:intron 35.0%
AGTATCATACCAGTTCATCT+TGG - chr1_3:57976611-57976630 None:intergenic 35.0%
AGTGAAATGTCTCAAAGAGA+TGG + chr1_3:57976777-57976796 Msa0128310:CDS 35.0%
! AGCTGTAGCAAAGTTTTCTA+TGG + chr1_3:57976800-57976819 Msa0128310:CDS 35.0%
! GTTTTCTATGGCACGTAAAA+AGG + chr1_3:57976812-57976831 Msa0128310:CDS 35.0%
TCCTATGGTAACAAAGAAAG+AGG + chr1_3:57976940-57976959 Msa0128310:CDS 35.0%
TCCTCTTTCTTTGTTACCAT+AGG - chr1_3:57976944-57976963 None:intergenic 35.0%
AGCAAATGCTCTTTGATCAA+CGG + chr1_3:57977020-57977039 Msa0128310:CDS 35.0%
!!! GCCATCTTTGTGTTTTTTGT+AGG + chr1_3:57977126-57977145 Msa0128310:intron 35.0%
CATGCAAATGAAATTTCACG+AGG + chr1_3:57977192-57977211 Msa0128310:CDS 35.0%
TTTATAGGCATGCACATTCA+CGG + chr1_3:57977335-57977354 Msa0128310:intron 35.0%
CAAACTATACAATGAAGTCC+AGG + chr1_3:57977406-57977425 Msa0128310:CDS 35.0%
AATGAAGTCCAGGATCTTAA+GGG + chr1_3:57977416-57977435 Msa0128310:CDS 35.0%
TCTTATTACCCTTAAGATCC+TGG - chr1_3:57977427-57977446 None:intergenic 35.0%
AGGGTAATAAGATTACTGGT+TGG + chr1_3:57977435-57977454 Msa0128310:intron 35.0%
! TAATAAGATTACTGGTTGGC+TGG + chr1_3:57977439-57977458 Msa0128310:intron 35.0%
TTTGGTTGTCCAGATAAGAA+AGG - chr1_3:57977570-57977589 None:intergenic 35.0%
CAGGTAAGAGATAACTGAAA+AGG - chr1_3:57977723-57977742 None:intergenic 35.0%
! AAGTTTTTCCTGATCCTGTT+TGG - chr1_3:57977874-57977893 None:intergenic 35.0%
ATCAGGAAAAACTTTCACCA+TGG + chr1_3:57977880-57977899 Msa0128310:CDS 35.0%
ACTTCAACTGTATCTTACCA+TGG - chr1_3:57977900-57977919 None:intergenic 35.0%
AAAGCCAAGGTGTAAATTAC+AGG + chr1_3:57978089-57978108 Msa0128310:CDS 35.0%
AAGCCAAGGTGTAAATTACA+GGG + chr1_3:57978090-57978109 Msa0128310:CDS 35.0%
! AGAGATCTATTGGTTACTGA+TGG + chr1_3:57978208-57978227 Msa0128310:CDS 35.0%
ATGAAAACAGCCTTTATTGG+TGG + chr1_3:57978331-57978350 Msa0128310:intron 35.0%
ATTCGTAGTAACTCTCAAAG+AGG + chr1_3:57978384-57978403 Msa0128310:CDS 35.0%
TTCGTAGTAACTCTCAAAGA+GGG + chr1_3:57978385-57978404 Msa0128310:CDS 35.0%
CAAAAACAGTTGTGGATAAC+AGG - chr1_3:57978562-57978581 None:intergenic 35.0%
!!! ATGTTGGTTTTTCTGAGCAA+GGG - chr1_3:57978823-57978842 None:intergenic 35.0%
! TATTTCTGTAAGGGACATGT+TGG - chr1_3:57978839-57978858 None:intergenic 35.0%
!! GTGAGTTTGCTATTTCTGTA+AGG - chr1_3:57978849-57978868 None:intergenic 35.0%
CAATTACTCCAAGATTCACT+TGG + chr1_3:57978870-57978889 Msa0128310:CDS 35.0%
GTGAACAAACATTAGTGTCT+TGG - chr1_3:57979017-57979036 None:intergenic 35.0%
! AATTGTTTCTCCAACAGCAT+TGG - chr1_3:57979053-57979072 None:intergenic 35.0%
GACTATTATGAAGAACTAGG+AGG - chr1_3:57979191-57979210 None:intergenic 35.0%
TAAACTTAACTGACGCAGTA+AGG - chr1_3:57979222-57979241 None:intergenic 35.0%
TTGAGTTCTTTGTCTCGATA+TGG - chr1_3:57979617-57979636 None:intergenic 35.0%
TTGAACAAGACTATTCACTG+GGG - chr1_3:57979683-57979702 None:intergenic 35.0%
AAATTGTGTGGAAGACGATA+AGG + chr1_3:57979702-57979721 Msa0128310:CDS 35.0%
AAGTTAGATGTGAACAAGAC+TGG + chr1_3:57979766-57979785 Msa0128310:CDS 35.0%
AACAAGACTGGTAACATGTT+AGG + chr1_3:57979778-57979797 Msa0128310:CDS 35.0%
ACAAGACTGGTAACATGTTA+GGG + chr1_3:57979779-57979798 Msa0128310:CDS 35.0%
!! AGATAATGGGAACTTATCTG+AGG + chr1_3:57979813-57979832 Msa0128310:CDS 35.0%
GCCTCTCATGAACATATTAT+AGG - chr1_3:57979890-57979909 None:intergenic 35.0%
TCTTCTTTAGTAATGCTCGT+AGG + chr1_3:57980104-57980123 Msa0128310:intron 35.0%
CTTCTTTAGTAATGCTCGTA+GGG + chr1_3:57980105-57980124 Msa0128310:intron 35.0%
CCATTTGTTTGTTTCCTTGA+AGG - chr1_3:57980386-57980405 None:intergenic 35.0%
CCTTCAAGGAAACAAACAAA+TGG + chr1_3:57980383-57980402 Msa0128310:CDS 35.0%
! GTTTTACGTTTCATGTCAAC+TGG - chr1_3:57980443-57980462 None:intergenic 35.0%
GTTGACATGAAACGTAAAAC+TGG + chr1_3:57980443-57980462 Msa0128310:CDS 35.0%
! GGATGATGTTTGGAACATAG+TGG + chr1_3:57974498-57974517 Msa0128310:five_prime_UTR 40.0%
GAAGCAACAAAGAGAGATAG+TGG + chr1_3:57974562-57974581 Msa0128310:five_prime_UTR 40.0%
! TTTAGGCTTGGTTTGAGAAG+TGG + chr1_3:57975234-57975253 Msa0128310:CDS 40.0%
! TTAGGCTTGGTTTGAGAAGT+GGG + chr1_3:57975235-57975254 Msa0128310:CDS 40.0%
GTTCTTAACAAGGTTCATCC+GGG + chr1_3:57975273-57975292 Msa0128310:CDS 40.0%
AATCAAGACTATGGTCACCT+TGG - chr1_3:57975307-57975326 None:intergenic 40.0%
AGGTAGGAATTCCAATTTCC+TGG - chr1_3:57975495-57975514 None:intergenic 40.0%
TTCTAGATCAGATGCCTCAA+AGG - chr1_3:57975515-57975534 None:intergenic 40.0%
AGAGGTCCTTGACAAAGAAT+TGG - chr1_3:57975868-57975887 None:intergenic 40.0%
! ATTTTGTCTAGGTGAGAAGG+CGG + chr1_3:57975984-57976003 Msa0128310:intron 40.0%
GAGAAGGCGGAATAACTAAA+TGG + chr1_3:57975997-57976016 Msa0128310:intron 40.0%
!! GCAGTCTAGTTCTCATTCTT+TGG + chr1_3:57976039-57976058 Msa0128310:intron 40.0%
TTCCTACGGTAAGGACTAAA+TGG + chr1_3:57976107-57976126 Msa0128310:intron 40.0%
ATCCATTTAGTCCTTACCGT+AGG - chr1_3:57976112-57976131 None:intergenic 40.0%
AGCGTTTCAGGAAAACGAAA+TGG - chr1_3:57976367-57976386 None:intergenic 40.0%
CTAGTGCAGTACTACTAGAT+GGG - chr1_3:57976429-57976448 None:intergenic 40.0%
ACTAGTGCAGTACTACTAGA+TGG - chr1_3:57976430-57976449 None:intergenic 40.0%
CATTACAAGCCAAGATGAAC+TGG + chr1_3:57976599-57976618 Msa0128310:CDS 40.0%
ACTGTGGTTTCCGATTGATT+AGG + chr1_3:57976904-57976923 Msa0128310:intron 40.0%
GGTGGATAACAAGATTCCTA+TGG + chr1_3:57976925-57976944 Msa0128310:intron 40.0%
TAAAAACCATGTTGCTGACG+AGG + chr1_3:57976973-57976992 Msa0128310:CDS 40.0%
GGCAGAGAGATATTCAAGTA+GGG + chr1_3:57977041-57977060 Msa0128310:intron 40.0%
ATGTGCATGCCTATAAAGAG+AGG - chr1_3:57977332-57977351 None:intergenic 40.0%
CAATGAAGTCCAGGATCTTA+AGG + chr1_3:57977415-57977434 Msa0128310:CDS 40.0%
CGAGTAAGACCTTTCTTATC+TGG + chr1_3:57977558-57977577 Msa0128310:CDS 40.0%
ACCATCTTCTATGTTCTCCA+CGG - chr1_3:57977604-57977623 None:intergenic 40.0%
TTCCCTCAAAGAATGGGAAA+GGG + chr1_3:57977640-57977659 Msa0128310:CDS 40.0%
CTGAAAAGGAAACCAACCTT+GGG - chr1_3:57977709-57977728 None:intergenic 40.0%
ACTGAAAAGGAAACCAACCT+TGG - chr1_3:57977710-57977729 None:intergenic 40.0%
ATATTTGCTTACGGCCAAAC+AGG + chr1_3:57977857-57977876 Msa0128310:CDS 40.0%
GAGATCACAGAAAAAAGCCA+AGG + chr1_3:57978076-57978095 Msa0128310:CDS 40.0%
TGAGCAAGTCAGAGATCTAT+TGG + chr1_3:57978198-57978217 Msa0128310:CDS 40.0%
AGGATATACACCTGTGAGAT+CGG - chr1_3:57978530-57978549 None:intergenic 40.0%
TGCTTGACTGTACATGTTCA+AGG + chr1_3:57978639-57978658 Msa0128310:CDS 40.0%
!!! CATGTTGGTTTTTCTGAGCA+AGG - chr1_3:57978824-57978843 None:intergenic 40.0%
! ATGTTGCTTGGGATAACTTC+AGG + chr1_3:57978983-57979002 Msa0128310:intron 40.0%
AGAGTTGCTACAGTTGAACT+TGG + chr1_3:57979094-57979113 Msa0128310:CDS 40.0%
CATTCTATATCTGGAAGCTC+TGG + chr1_3:57979311-57979330 Msa0128310:CDS 40.0%
GATATCATGGATGATCCCTT+TGG + chr1_3:57979392-57979411 Msa0128310:CDS 40.0%
AAGTTGCCAACATCAATCAC+TGG - chr1_3:57979428-57979447 None:intergenic 40.0%
GATTGATGTTGGCAACTTAG+AGG + chr1_3:57979430-57979449 Msa0128310:CDS 40.0%
CATTAACAAATTCACCACCC+TGG + chr1_3:57979656-57979675 Msa0128310:CDS 40.0%
TGAACAAGACTATTCACTGG+GGG - chr1_3:57979682-57979701 None:intergenic 40.0%
!! AGAGTGGGTTGATAAGGTTA+TGG + chr1_3:57979738-57979757 Msa0128310:CDS 40.0%
! TGGTAACATGTTAGGGTGTT+GGG + chr1_3:57979786-57979805 Msa0128310:CDS 40.0%
! GGATCGTTCTGAGTATACTT+TGG - chr1_3:57979869-57979888 None:intergenic 40.0%
! CCAGTTTAACATTGCTGGTT+CGG + chr1_3:57979912-57979931 Msa0128310:CDS 40.0%
GTCATGTTCTGATGAATCAC+TGG - chr1_3:57979965-57979984 None:intergenic 40.0%
!! CATCAGAACATGACTTGCTT+TGG + chr1_3:57979971-57979990 Msa0128310:CDS 40.0%
AAAGTTACAAGCGTAGCCAA+CGG + chr1_3:57980009-57980028 Msa0128310:CDS 40.0%
! CAGCTAAAAGCACAGAATTG+AGG + chr1_3:57980067-57980086 Msa0128310:CDS 40.0%
GTTTGTTTCCTTGAAGGTGA+AGG - chr1_3:57980380-57980399 None:intergenic 40.0%
! GTTTGGAACATAGTGGGGTT+CGG + chr1_3:57974505-57974524 Msa0128310:five_prime_UTR 45.0%
!! CAACAAAGAGAGATAGTGGG+AGG + chr1_3:57974566-57974585 Msa0128310:five_prime_UTR 45.0%
GTGTACAGAGCAAAAGCCAA+AGG + chr1_3:57974646-57974665 Msa0128310:five_prime_UTR 45.0%
!!! GGCAGCATTGTCATTTTCAG+TGG + chr1_3:57974934-57974953 Msa0128310:CDS 45.0%
TTCAGTGGCATCTGTTGTTG+AGG + chr1_3:57974949-57974968 Msa0128310:CDS 45.0%
GAGGATGTTCTTCAACAGCA+TGG + chr1_3:57974968-57974987 Msa0128310:CDS 45.0%
AGCAGGGTGGTTGAGAAAAA+TGG + chr1_3:57975161-57975180 Msa0128310:CDS 45.0%
GGGTGGTTGAGAAAAATGGT+TGG + chr1_3:57975165-57975184 Msa0128310:CDS 45.0%
! AGCCTTCTGAGGAAGAGTTT+AGG + chr1_3:57975217-57975236 Msa0128310:CDS 45.0%
AGCCTAAACTCTTCCTCAGA+AGG - chr1_3:57975222-57975241 None:intergenic 45.0%
TCTGAGGAAGAGTTTAGGCT+TGG + chr1_3:57975222-57975241 Msa0128310:CDS 45.0%
! GGGATTAGTGCAGAATCAAC+AGG - chr1_3:57975409-57975428 None:intergenic 45.0%
! AAACTTTCTGGTGGCTATCC+AGG + chr1_3:57975474-57975493 Msa0128310:CDS 45.0%
AGATCAGATGCCTCAAAGGT+AGG - chr1_3:57975511-57975530 None:intergenic 45.0%
TGGAAACAAACTGGGGCTAA+TGG + chr1_3:57975765-57975784 Msa0128310:CDS 45.0%
AAACTGGGGCTAATGGTGTA+TGG + chr1_3:57975772-57975791 Msa0128310:CDS 45.0%
GAAGCCAGAAGAAGTTCCTA+CGG + chr1_3:57976093-57976112 Msa0128310:CDS 45.0%
CTTACCGTAGGAACTTCTTC+TGG - chr1_3:57976100-57976119 None:intergenic 45.0%
CAGAAGAAGTTCCTACGGTA+AGG + chr1_3:57976098-57976117 Msa0128310:intron 45.0%
ATGCGCCCTAAATGCAGAAT+TGG + chr1_3:57976392-57976411 Msa0128310:intron 45.0%
GTTCTTCTGCATGGAACAGT+TGG + chr1_3:57976533-57976552 Msa0128310:intron 45.0%
!!! TGTTTTGGCGAAAGTCGTAG+AGG + chr1_3:57976563-57976582 Msa0128310:CDS 45.0%
GTGGTTTCCGATTGATTAGG+TGG + chr1_3:57976907-57976926 Msa0128310:intron 45.0%
CGGCAGAGAGATATTCAAGT+AGG + chr1_3:57977040-57977059 Msa0128310:intron 45.0%
ACAGTTCAAACCACCAAAGC+TGG + chr1_3:57977160-57977179 Msa0128310:CDS 45.0%
CATGAACTGCATACCAGCTT+TGG - chr1_3:57977176-57977195 None:intergenic 45.0%
CACGAGGAGTTCTCCAATTT+AGG + chr1_3:57977208-57977227 Msa0128310:CDS 45.0%
! ACCAAATCATTCGAGTACCG+TGG + chr1_3:57977584-57977603 Msa0128310:CDS 45.0%
TCCACGGTACTCGAATGATT+TGG - chr1_3:57977588-57977607 None:intergenic 45.0%
ACCGTGGAGAACATAGAAGA+TGG + chr1_3:57977600-57977619 Msa0128310:CDS 45.0%
GTTCCCTCAAAGAATGGGAA+AGG + chr1_3:57977639-57977658 Msa0128310:CDS 45.0%
TTGTCTATTGTGTTCAGGGG+AGG + chr1_3:57977778-57977797 Msa0128310:intron 45.0%
CTGATATGCAGCCACTTGTT+AGG + chr1_3:57977807-57977826 Msa0128310:CDS 45.0%
GAGCCCTGTAATTTACACCT+TGG - chr1_3:57978096-57978115 None:intergenic 45.0%
AGGGATAGCACCACCAATAA+AGG - chr1_3:57978344-57978363 None:intergenic 45.0%
ACTTGAACAAGGCTTGCATC+TGG - chr1_3:57978420-57978439 None:intergenic 45.0%
CAAGGAAGAGACTTGACATC+TGG + chr1_3:57978657-57978676 Msa0128310:CDS 45.0%
! TGACATCTGGAGCTGTCTTA+CGG + chr1_3:57978670-57978689 Msa0128310:CDS 45.0%
! ATGCATGCATCTCGTTGACT+TGG + chr1_3:57978695-57978714 Msa0128310:CDS 45.0%
TTGCTTGGGATAACTTCAGG+AGG + chr1_3:57978986-57979005 Msa0128310:intron 45.0%
GTTTGTTCACATTAGTCCCG+AGG + chr1_3:57979027-57979046 Msa0128310:CDS 45.0%
CGTCAAAGAGCTCAAAGAAC+AGG + chr1_3:57979147-57979166 Msa0128310:CDS 45.0%
! TAAGGCTGGCAATCTGAAAC+AGG - chr1_3:57979256-57979275 None:intergenic 45.0%
GTTTCAGATTGCCAGCCTTA+AGG + chr1_3:57979256-57979275 Msa0128310:intron 45.0%
TTCTTGCCAATGCTGCCTTA+AGG - chr1_3:57979274-57979293 None:intergenic 45.0%
!! TAAGGCAGCATTGGCAAGAA+AGG + chr1_3:57979274-57979293 Msa0128310:CDS 45.0%
!! CTGGAAGCTCTGGAAAATGT+AGG + chr1_3:57979321-57979340 Msa0128310:CDS 45.0%
! CTCTGGAAAATGTAGGACAG+CGG + chr1_3:57979328-57979347 Msa0128310:CDS 45.0%
! CAACATCAATCACTGGTTGC+CGG - chr1_3:57979421-57979440 None:intergenic 45.0%
AGAAATAGCCGGCATCCAAA+GGG - chr1_3:57979543-57979562 None:intergenic 45.0%
AAGAAATAGCCGGCATCCAA+AGG - chr1_3:57979544-57979563 None:intergenic 45.0%
GTGGAAGACGATAAGGAAAC+CGG + chr1_3:57979709-57979728 Msa0128310:CDS 45.0%
!! TACAGGAGAGTGGGTTGATA+AGG + chr1_3:57979732-57979751 Msa0128310:CDS 45.0%
CTGGTAACATGTTAGGGTGT+TGG + chr1_3:57979785-57979804 Msa0128310:CDS 45.0%
! GGTGTTGGGAAGCAGATAAT+GGG + chr1_3:57979800-57979819 Msa0128310:CDS 45.0%
GGCAACCAGTTTAACATTGC+TGG + chr1_3:57979907-57979926 Msa0128310:CDS 45.0%
CCGAACCAGCAATGTTAAAC+TGG - chr1_3:57979915-57979934 None:intergenic 45.0%
GGTAGCAGCATCAACATCAT+CGG - chr1_3:57979944-57979963 None:intergenic 45.0%
AGCCAACGGACATGAATCAA+AGG + chr1_3:57980023-57980042 Msa0128310:CDS 45.0%
GCCAACGGACATGAATCAAA+GGG + chr1_3:57980024-57980043 Msa0128310:CDS 45.0%
ACCCTTTGATTCATGTCCGT+TGG - chr1_3:57980028-57980047 None:intergenic 45.0%
ACGGACATGAATCAAAGGGT+AGG + chr1_3:57980028-57980047 Msa0128310:CDS 45.0%
TAATGCCCGTTGCTTGTACA+TGG + chr1_3:57980672-57980691 Msa0128310:three_prime_UTR 45.0%
TCATGCCATGTACAAGCAAC+GGG - chr1_3:57980680-57980699 None:intergenic 45.0%
GTCATGCCATGTACAAGCAA+CGG - chr1_3:57980681-57980700 None:intergenic 45.0%
CAACTCCTTCCCACATGCTT+CGG - chr1_3:57974533-57974552 None:intergenic 50.0%
!! AAGAGAGATAGTGGGAGGAG+AGG + chr1_3:57974571-57974590 Msa0128310:five_prime_UTR 50.0%
GAAGATATGAAGCAGCAGGG+TGG + chr1_3:57975148-57975167 Msa0128310:CDS 50.0%
TTTACCAGCAGAGCCTTCTG+AGG + chr1_3:57975206-57975225 Msa0128310:CDS 50.0%
TCATCCGGGTTCTGTATCCA+AGG + chr1_3:57975287-57975306 Msa0128310:CDS 50.0%
GTCACCTTGGATACAGAACC+CGG - chr1_3:57975294-57975313 None:intergenic 50.0%
GATTCTGCACTAATCCCCGA+TGG + chr1_3:57975412-57975431 Msa0128310:CDS 50.0%
! AGCAGATAATGGCGCTCCAT+CGG - chr1_3:57975431-57975450 None:intergenic 50.0%
CTGGTGGCTATCCAGGAAAT+TGG + chr1_3:57975481-57975500 Msa0128310:CDS 50.0%
!! GGCGCATTTTTCAGCGTTTC+AGG - chr1_3:57976379-57976398 None:intergenic 50.0%
! GAACTGCATACCAGCTTTGG+TGG - chr1_3:57977173-57977192 None:intergenic 50.0%
CGCCCTTTCCCATTCTTTGA+GGG - chr1_3:57977645-57977664 None:intergenic 50.0%
TCGAGCACAGACCTAACAAG+TGG - chr1_3:57977821-57977840 None:intergenic 50.0%
CTTGTTAGGTCTGTGCTCGA+TGG + chr1_3:57977821-57977840 Msa0128310:CDS 50.0%
TCGGCTGCTACGGTCATTAA+GGG - chr1_3:57978511-57978530 None:intergenic 50.0%
ATCGGCTGCTACGGTCATTA+AGG - chr1_3:57978512-57978531 None:intergenic 50.0%
! GACATCTGGAGCTGTCTTAC+GGG + chr1_3:57978671-57978690 Msa0128310:CDS 50.0%
! ACATCTGGAGCTGTCTTACG+GGG + chr1_3:57978672-57978691 Msa0128310:CDS 50.0%
!! ATGCATCTCGTTGACTTGGC+AGG + chr1_3:57978699-57978718 Msa0128310:CDS 50.0%
!! TTGACTTGGCAGGAAGTGAG+AGG + chr1_3:57978709-57978728 Msa0128310:CDS 50.0%
! TGACTTGGCAGGAAGTGAGA+GGG + chr1_3:57978710-57978729 Msa0128310:CDS 50.0%
TGAGAGGGTCGACAAATCTG+AGG + chr1_3:57978725-57978744 Msa0128310:CDS 50.0%
GACGGGCGATAGATTGAAAG+AGG + chr1_3:57978749-57978768 Msa0128310:CDS 50.0%
TGGGATAACTTCAGGAGGAC+AGG + chr1_3:57978991-57979010 Msa0128310:intron 50.0%
!! TTCTCCAACAGCATTGGCCT+CGG - chr1_3:57979047-57979066 None:intergenic 50.0%
!! GCAGCATTGGCAAGAAAGGA+AGG + chr1_3:57979278-57979297 Msa0128310:CDS 50.0%
CACCTTATCATGCAAGCCAG+CGG + chr1_3:57979363-57979382 Msa0128310:CDS 50.0%
ACCTTATCATGCAAGCCAGC+GGG + chr1_3:57979364-57979383 Msa0128310:CDS 50.0%
TGGATGATCCCTTTGGATGC+CGG + chr1_3:57979399-57979418 Msa0128310:CDS 50.0%
CGGCAACCAGTGATTGATGT+TGG + chr1_3:57979419-57979438 Msa0128310:CDS 50.0%
TGGATGATCCCTTTGGATGC+CGG + chr1_3:57979399-57979418 Msa0128310:CDS 50.0%
GACGATAAGGAAACCGGTAC+AGG + chr1_3:57979715-57979734 Msa0128310:CDS 50.0%
ATCAACCCACTCTCCTGTAC+CGG - chr1_3:57979731-57979750 None:intergenic 50.0%
!! GGGTGTTGGGAAGCAGATAA+TGG + chr1_3:57979799-57979818 Msa0128310:CDS 50.0%
ATTGTATGCACAGGCAGCAC+TGG - chr1_3:57980280-57980299 None:intergenic 50.0%
CTACTGCTCCTTCACCTTCA+AGG + chr1_3:57980369-57980388 Msa0128310:CDS 50.0%
TCGCACATCGAACACCAACA+AGG + chr1_3:57980408-57980427 Msa0128310:CDS 50.0%
CGTTTCATGTCAACTGGAGC+TGG - chr1_3:57980437-57980456 None:intergenic 50.0%
GGTTCGGAACCGAAGCATGT+GGG + chr1_3:57974521-57974540 Msa0128310:five_prime_UTR 55.0%
CGAAGCATGTGGGAAGGAGT+TGG + chr1_3:57974531-57974550 Msa0128310:five_prime_UTR 55.0%
TCTTCCTCAGAAGGCTCTGC+TGG - chr1_3:57975213-57975232 None:intergenic 55.0%
! CAGATAATGGCGCTCCATCG+GGG - chr1_3:57975429-57975448 None:intergenic 55.0%
! GCAGATAATGGCGCTCCATC+GGG - chr1_3:57975430-57975449 None:intergenic 55.0%
GTGACTCCTCGTCAGCAACA+TGG - chr1_3:57976982-57977001 None:intergenic 55.0%
TTGCTGACGAGGAGTCACAG+AGG + chr1_3:57976984-57977003 Msa0128310:CDS 55.0%
! GGCTTAGCTCATGCTGCTTC+TGG + chr1_3:57977356-57977375 Msa0128310:CDS 55.0%
GCGCCCTTTCCCATTCTTTG+AGG - chr1_3:57977646-57977665 None:intergenic 55.0%
TTTGGACCATCTGCAGCCCA+AGG + chr1_3:57977690-57977709 Msa0128310:CDS 55.0%
AACCAACCTTGGGCTGCAGA+TGG - chr1_3:57977699-57977718 None:intergenic 55.0%
GCTTACGGCCAAACAGGATC+AGG + chr1_3:57977863-57977882 Msa0128310:CDS 55.0%
ACCTGTGAGATCGGCTGCTA+CGG - chr1_3:57978521-57978540 None:intergenic 55.0%
! GGTCGACAAATCTGAGGCGA+CGG + chr1_3:57978731-57978750 Msa0128310:CDS 55.0%
! GTCGACAAATCTGAGGCGAC+GGG + chr1_3:57978732-57978751 Msa0128310:CDS 55.0%
!! TCTCCAACAGCATTGGCCTC+GGG - chr1_3:57979046-57979065 None:intergenic 55.0%
CTGCCCGAGTCAACAAGGAT+GGG + chr1_3:57979119-57979138 Msa0128310:CDS 55.0%
TGCCCGAGTCAACAAGGATG+GGG + chr1_3:57979120-57979139 Msa0128310:CDS 55.0%
!! TGCCCCATCCTTGTTGACTC+GGG - chr1_3:57979125-57979144 None:intergenic 55.0%
! CTGCCCCATCCTTGTTGACT+CGG - chr1_3:57979126-57979145 None:intergenic 55.0%
TGCCAGCCTTAAGGCAGCAT+TGG + chr1_3:57979265-57979284 Msa0128310:CDS 55.0%
TGCCAATGCTGCCTTAAGGC+TGG - chr1_3:57979270-57979289 None:intergenic 55.0%
GTAGGACAGCGGCTAGTGAA+CGG + chr1_3:57979339-57979358 Msa0128310:CDS 55.0%
ACTGGTTGCCGGCATCCAAA+GGG - chr1_3:57979410-57979429 None:intergenic 55.0%
AGACTATTCACTGGGGGCCA+GGG - chr1_3:57979676-57979695 None:intergenic 55.0%
AAGACTATTCACTGGGGGCC+AGG - chr1_3:57979677-57979696 None:intergenic 55.0%
AGGAAACCGGTACAGGAGAG+TGG + chr1_3:57979722-57979741 Msa0128310:CDS 55.0%
GGAAACCGGTACAGGAGAGT+GGG + chr1_3:57979723-57979742 Msa0128310:CDS 55.0%
ACTGGAGCTGGTTGCCTTGT+TGG - chr1_3:57980425-57980444 None:intergenic 55.0%
GGGTTCGGAACCGAAGCATG+TGG + chr1_3:57974520-57974539 Msa0128310:five_prime_UTR 60.0%
CGGAACCGAAGCATGTGGGA+AGG + chr1_3:57974525-57974544 Msa0128310:five_prime_UTR 60.0%
GACCATCTGCAGCCCAAGGT+TGG + chr1_3:57977694-57977713 Msa0128310:intron 60.0%
ACCGTAGCAGCCGATCTCAC+AGG + chr1_3:57978517-57978536 Msa0128310:CDS 60.0%
AGTCCCGAGGCCAATGCTGT+TGG + chr1_3:57979040-57979059 Msa0128310:CDS 60.0%
!! TGGTGCTGCCCGAGTCAACA+AGG + chr1_3:57979114-57979133 Msa0128310:CDS 60.0%
GCTGCCCGAGTCAACAAGGA+TGG + chr1_3:57979118-57979137 Msa0128310:CDS 60.0%
!! GCCCGCTGGCTTGCATGATA+AGG - chr1_3:57979368-57979387 None:intergenic 60.0%
CCATGATATCTGCAGCCCGC+TGG - chr1_3:57979382-57979401 None:intergenic 60.0%
!! CCAGCGGGCTGCAGATATCA+TGG + chr1_3:57979379-57979398 Msa0128310:CDS 60.0%
! CACTGGTTGCCGGCATCCAA+AGG - chr1_3:57979411-57979430 None:intergenic 60.0%
CTATTCACTGGGGGCCAGGG+TGG - chr1_3:57979673-57979692 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 57974492 57980804 57974492 ID=Msa0128310;Name=Msa0128310
chr1_3 mRNA 57974492 57980804 57974492 ID=Msa0128310-mRNA-1;Parent=Msa0128310;Name=Msa0128310-mRNA-1;_AED=0.13;_eAED=0.13;_QI=185|0.84|0.8|1|0.94|0.9|20|326|1021
chr1_3 exon 57974492 57974667 57974492 ID=Msa0128310-mRNA-1:exon:18534;Parent=Msa0128310-mRNA-1
chr1_3 exon 57974923 57975040 57974923 ID=Msa0128310-mRNA-1:exon:18535;Parent=Msa0128310-mRNA-1
chr1_3 exon 57975142 57975308 57975142 ID=Msa0128310-mRNA-1:exon:18536;Parent=Msa0128310-mRNA-1
chr1_3 exon 57975394 57975537 57975394 ID=Msa0128310-mRNA-1:exon:18537;Parent=Msa0128310-mRNA-1
chr1_3 exon 57975708 57975944 57975708 ID=Msa0128310-mRNA-1:exon:18538;Parent=Msa0128310-mRNA-1
chr1_3 exon 57976043 57976114 57976043 ID=Msa0128310-mRNA-1:exon:18539;Parent=Msa0128310-mRNA-1
chr1_3 exon 57976552 57976620 57976552 ID=Msa0128310-mRNA-1:exon:18540;Parent=Msa0128310-mRNA-1
chr1_3 exon 57976759 57976833 57976759 ID=Msa0128310-mRNA-1:exon:18541;Parent=Msa0128310-mRNA-1
chr1_3 exon 57976926 57977057 57976926 ID=Msa0128310-mRNA-1:exon:18542;Parent=Msa0128310-mRNA-1
chr1_3 exon 57977148 57977229 57977148 ID=Msa0128310-mRNA-1:exon:18543;Parent=Msa0128310-mRNA-1
chr1_3 exon 57977342 57977452 57977342 ID=Msa0128310-mRNA-1:exon:18544;Parent=Msa0128310-mRNA-1
chr1_3 exon 57977538 57977711 57977538 ID=Msa0128310-mRNA-1:exon:18545;Parent=Msa0128310-mRNA-1
chr1_3 exon 57977795 57977901 57977795 ID=Msa0128310-mRNA-1:exon:18546;Parent=Msa0128310-mRNA-1
chr1_3 exon 57978064 57978253 57978064 ID=Msa0128310-mRNA-1:exon:18547;Parent=Msa0128310-mRNA-1
chr1_3 exon 57978382 57978538 57978382 ID=Msa0128310-mRNA-1:exon:18548;Parent=Msa0128310-mRNA-1
chr1_3 exon 57978638 57978891 57978638 ID=Msa0128310-mRNA-1:exon:18549;Parent=Msa0128310-mRNA-1
chr1_3 exon 57979005 57979168 57979005 ID=Msa0128310-mRNA-1:exon:18550;Parent=Msa0128310-mRNA-1
chr1_3 exon 57979263 57979466 57979263 ID=Msa0128310-mRNA-1:exon:18551;Parent=Msa0128310-mRNA-1
chr1_3 exon 57979601 57980088 57979601 ID=Msa0128310-mRNA-1:exon:18552;Parent=Msa0128310-mRNA-1
chr1_3 exon 57980349 57980804 57980349 ID=Msa0128310-mRNA-1:exon:18553;Parent=Msa0128310-mRNA-1
chr1_3 five_prime_UTR 57974492 57974667 57974492 ID=Msa0128310-mRNA-1:five_prime_utr;Parent=Msa0128310-mRNA-1
chr1_3 five_prime_UTR 57974923 57974931 57974923 ID=Msa0128310-mRNA-1:five_prime_utr;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57974932 57975040 57974932 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57975142 57975308 57975142 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57975394 57975537 57975394 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57975708 57975944 57975708 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57976043 57976114 57976043 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57976552 57976620 57976552 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57976759 57976833 57976759 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57976926 57977057 57976926 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57977148 57977229 57977148 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57977342 57977452 57977342 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57977538 57977711 57977538 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57977795 57977901 57977795 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57978064 57978253 57978064 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57978382 57978538 57978382 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57978638 57978891 57978638 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57979005 57979168 57979005 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57979263 57979466 57979263 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57979601 57980088 57979601 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 CDS 57980349 57980478 57980349 ID=Msa0128310-mRNA-1:cds;Parent=Msa0128310-mRNA-1
chr1_3 three_prime_UTR 57980479 57980804 57980479 ID=Msa0128310-mRNA-1:three_prime_utr;Parent=Msa0128310-mRNA-1
Gene Sequence

>Msa0128310

ATGGCAGCATTGTCATTTTCAGTGGCATCTGTTGTTGAGGATGTTCTTCAACAGCATGGTACTCGTCTTAAAGATCTTGATTTGGAATCTAGAAAATCAGAAGAAGCTGCATTAAGAAGATATGAAGCAGCAGGGTGGTTGAGAAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAGCCTTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATTCTTTGTAATGTTCTTAACAAGGTTCATCCGGGTTCTGTATCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCACTAATCCCCGATGGAGCGCCATTATCTGCTTTTCAGTATTTTGAAAATGTTAGAAACTTTCTGGTGGCTATCCAGGAAATTGGAATTCCTACCTTTGAGGCATCTGATCTAGAACAAGGAGGAAAATCATCAAGGATTGTGAGTAGTGTATTGGCCCTTAAATCCTATAGTGAATGGAAACAAACTGGGGCTAATGGTGTATGGAAATTTGGTGGAACTATCAAACCAGCAATCACTGCAAAATCTTTTGTGAGAAAAAACTCCGAGCCATTTACCAATTCTTTGTCAAGGACCTCTTCCATCAATGAAAAATCTGTGACTTCTTTTACCTCTGATGTCGAGTCTAATAAAATGTCTAGTTCTCATTCTTTGGGTATGCTTGTTCGTGCAATACTTTTCGATAAGAAGCCAGAAGAAGTTCCTACGTTGGTTGAATCTGTTTTGGCGAAAGTCGTAGAGGAGTTTGAGCATCGCATTACAAGCCAAGATGAACTGACAAAAACAACTTCAAGAAGTGAAATGTCTCAAAGAGATGGAGCTGTAGCAAAGTTTTCTATGGCACGTAAAAAGGTGGATAACAAGATTCCTATGGTAACAAAGAAAGAGGAATTCATCTATAAAAACCATGTTGCTGACGAGGAGTCACAGAGGCAACTTCAGAAGCAGCAAATGCTCTTTGATCAACGGCAGAGAGATATTCAAGAATTAAAGCATACAGTTCAAACCACCAAAGCTGGTATGCAGTTCATGCAAATGAAATTTCACGAGGAGTTCTCCAATTTAGGCATGCACATTCACGGCTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTCGAAGAAAATCGCAAACTATACAATGAAGTCCAGGATCTTAAGGGTAATAAGATTACTGGAAGTATTAGGGTTTACTGTCGAGTAAGACCTTTCTTATCTGGACAACCAAATCATTCGAGTACCGTGGAGAACATAGAAGATGGTGTTATCACAATTAATGTTCCCTCAAAGAATGGGAAAGGGCGCAGATCCTTCAACTTCAACAAAGTCTTTGGACCATCTGCAGCCCAAGGGGAGGTCTTCGCTGATATGCAGCCACTTGTTAGGTCTGTGCTCGATGGTTTTAATGTTTGCATATTTGCTTACGGCCAAACAGGATCAGGAAAAACTTTCACCATGACTGGACCAAAAGAGATCACAGAAAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGTGATCTATTTTATACAGCGAATCAAAGAAAGGACACTTTTCGCTATGATGTGTCTGTTCAGATGATTGAAATATATAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGAACAAACAAAAGATATCCTTTTAAAATTCGTAGTAACTCTCAAAGAGGGCTAAGTGTACCAGATGCAAGCCTTGTTCAAGTATCATCAACAAATGATGTTATTGAACTAATGAACTTGGGTCATAAGAACCGTGCAGTCGGAGCAACAGCCCTTAATGACCGTAGCAGCCGATCTCACAGTTGCTTGACTGTACATGTTCAAGGAAGAGACTTGACATCTGGAGCTGTCTTACGGGGATGCATGCATCTCGTTGACTTGGCAGGAAGTGAGAGGGTCGACAAATCTGAGGCGACGGGCGATAGATTGAAAGAGGCACAACATATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATTGCTTCCCTTGCTCAGAAAAACCAACATGTCCCTTACAGAAATAGCAAACTCACACAATTACTCCAAGATTCACTTGGAGGACAGGCCAAGACACTAATGTTTGTTCACATTAGTCCCGAGGCCAATGCTGTTGGAGAAACAATTAGCACATTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGTGCTGCCCGAGTCAACAAGGATGGGGCAGACGTCAAAGAGCTCAAAGAACAGATTGCCAGCCTTAAGGCAGCATTGGCAAGAAAGGAAGGAAATTTAGAACATTCTATATCTGGAAGCTCTGGAAAATGTAGGACAGCGGCTAGTGAACGGTCACCTTATCATGCAAGCCAGCGGGCTGCAGATATCATGGATGATCCCTTTGGATGCCGGCAACCAGTGATTGATGTTGGCAACTTAGAGGCATGTATATTTTTTCTTCAGAGCAATACCATATCGAGACAAAGAACTCAAAGCTTTGATTTTGATGAGACATTAACAAATTCACCACCCTGGCCCCCAGTGAATAGTCTTGTTCAAAATTGTGTGGAAGACGATAAGGAAACCGGTACAGGAGAGTGGGTTGATAAGGTTATGGTAAACAAGTTAGATGTGAACAAGACTGGTAACATGTTAGGGTGTTGGGAAGCAGATAATGGGAACTTATCTGAGGAATTTTATCAGAAATATCTTCAAGATTCTTCCAAAGTATACTCAGAACGATCCTATAATATGTTCATGAGAGGCAACCAGTTTAACATTGCTGGTTCGGATGACACCGATGATGTTGATGCTGCTACCAGTGATTCATCAGAACATGACTTGCTTTGGCAATTTAATCATTCAAAAGTTACAAGCGTAGCCAACGGACATGAATCAAAGGGTAGGAGATTTGTCTCAAAGTCAGCTAAAAGCACAGAATTGAGCAAGAATAGCATTCATTCTTCTACTGCTCCTTCACCTTCAAGGAAACAAACAAATGGTGTCGCACATCGAACACCAACAAGGCAACCAGCTCCAGTTGACATGAAACGTAAAACTGGGACTAGAAAGTGA
Protein sequence

>Msa0128310

MAALSFSVASVVEDVLQQHGTRLKDLDLESRKSEEAALRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVHPGSVSKVVESPVDSALIPDGAPLSAFQYFENVRNFLVAIQEIGIPTFEASDLEQGGKSSRIVSSVLALKSYSEWKQTGANGVWKFGGTIKPAITAKSFVRKNSEPFTNSLSRTSSINEKSVTSFTSDVESNKMSSSHSLGMLVRAILFDKKPEEVPTLVESVLAKVVEEFEHRITSQDELTKTTSRSEMSQRDGAVAKFSMARKKVDNKIPMVTKKEEFIYKNHVADEESQRQLQKQQMLFDQRQRDIQELKHTVQTTKAGMQFMQMKFHEEFSNLGMHIHGLAHAASGYHRVLEENRKLYNEVQDLKGNKITGSIRVYCRVRPFLSGQPNHSSTVENIEDGVITINVPSKNGKGRRSFNFNKVFGPSAAQGEVFADMQPLVRSVLDGFNVCIFAYGQTGSGKTFTMTGPKEITEKSQGVNYRALSDLFYTANQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGTNKRYPFKIRSNSQRGLSVPDASLVQVSSTNDVIELMNLGHKNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAVLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEANAVGETISTLKFAERVATVELGAARVNKDGADVKELKEQIASLKAALARKEGNLEHSISGSSGKCRTAASERSPYHASQRAADIMDDPFGCRQPVIDVGNLEACIFFLQSNTISRQRTQSFDFDETLTNSPPWPPVNSLVQNCVEDDKETGTGEWVDKVMVNKLDVNKTGNMLGCWEADNGNLSEEFYQKYLQDSSKVYSERSYNMFMRGNQFNIAGSDDTDDVDAATSDSSEHDLLWQFNHSKVTSVANGHESKGRRFVSKSAKSTELSKNSIHSSTAPSPSRKQTNGVAHRTPTRQPAPVDMKRKTGTRK*