Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0511440 | XP_003601282.1 | 94.949 | 297 | 10 | 2 | 1 | 293 | 1 | 296 | 0.0 | 583 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0511440 | sp|Q84WP5|CSPL8_ARATH | 59.906 | 212 | 77 | 3 | 79 | 286 | 70 | 277 | 8.74e-84 | 256 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0511440 | G7J5H7 | 94.949 | 297 | 10 | 2 | 1 | 293 | 1 | 296 | 0.0 | 583 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0163510 | Msa0511440 | 0.800671 | 1.292032e-48 | -8.615850e-47 |
| Msa0209140 | Msa0511440 | 0.813303 | 2.741037e-51 | -8.615850e-47 |
| Msa0402070 | Msa0511440 | -0.813959 | 1.965158e-51 | -8.615850e-47 |
| Msa0423550 | Msa0511440 | 0.996291 | 1.092998e-225 | -8.615850e-47 |
| Msa0450400 | Msa0511440 | -0.802816 | 4.688907e-49 | -8.615850e-47 |
| Msa0465500 | Msa0511440 | 0.965807 | 4.369884e-125 | -8.615850e-47 |
| Msa0257490 | Msa0511440 | 0.801010 | 1.101790e-48 | -8.615850e-47 |
| Msa0281530 | Msa0511440 | 0.804235 | 2.381027e-49 | -8.615850e-47 |
| Msa0288080 | Msa0511440 | 0.815249 | 1.018382e-51 | -8.615850e-47 |
| Msa0309990 | Msa0511440 | 0.806668 | 7.354923e-50 | -8.615850e-47 |
| Msa0320590 | Msa0511440 | 0.822220 | 2.661440e-53 | -8.615850e-47 |
| Msa0511440 | Msa0515800 | 0.804349 | 2.254751e-49 | -8.615850e-47 |
| Msa0511440 | Msa0611640 | 0.808317 | 3.286770e-50 | -8.615850e-47 |
| Msa0511440 | Msa0677530 | 0.819313 | 1.240207e-52 | -8.615850e-47 |
| Msa0511440 | Msa0693330 | 0.864687 | 1.016672e-64 | -8.615850e-47 |
| Msa0511440 | Msa0702720 | 0.822900 | 1.849250e-53 | -8.615850e-47 |
| Msa0511440 | Msa0752450 | 0.833493 | 5.165667e-56 | -8.615850e-47 |
| Msa0511440 | Msa0830660 | 0.820545 | 6.481889e-53 | -8.615850e-47 |
| Msa0511440 | Msa0841860 | 0.816267 | 6.040172e-52 | -8.615850e-47 |
| Msa0511440 | Msa1212830 | 0.802828 | 4.660910e-49 | -8.615850e-47 |
| Msa0511440 | Msa1213040 | 0.840563 | 8.065309e-58 | -8.615850e-47 |
| Msa0511440 | Msa1228040 | 0.854383 | 1.276908e-61 | -8.615850e-47 |
| Msa0511440 | Msa1238660 | 0.801581 | 8.414421e-49 | -8.615850e-47 |
| Msa0511440 | Msa1260220 | 0.833399 | 5.453656e-56 | -8.615850e-47 |
| Msa0511440 | Msa1308220 | 0.841560 | 4.411937e-58 | -8.615850e-47 |
| Msa0511440 | Msa1341840 | 0.801939 | 7.106089e-49 | -8.615850e-47 |
| Msa0511440 | Msa1454500 | 0.815025 | 1.141781e-51 | -8.615850e-47 |
| Msa0511440 | Msa1463950 | 0.802285 | 6.031113e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0511440 | MtrunA17_Chr3g0117741 | 94.949 | 297 | 10 | 2 | 1 | 293 | 1 | 296 | 0.0 | 583 |
| Msa0511440 | MtrunA17_Chr4g0059141 | 51.536 | 293 | 113 | 8 | 19 | 289 | 1 | 286 | 1.14e-91 | 273 |
| Msa0511440 | MtrunA17_Chr7g0228001 | 43.062 | 209 | 84 | 3 | 117 | 290 | 120 | 328 | 8.00e-46 | 157 |
| Msa0511440 | MtrunA17_Chr6g0450781 | 34.821 | 224 | 109 | 6 | 100 | 287 | 9 | 231 | 2.68e-28 | 108 |
| Msa0511440 | MtrunA17_Chr7g0243881 | 34.868 | 152 | 96 | 2 | 138 | 289 | 51 | 199 | 1.70e-24 | 97.8 |
| Msa0511440 | MtrunA17_Chr4g0004941 | 35.570 | 149 | 93 | 3 | 138 | 286 | 38 | 183 | 1.92e-20 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0511440 | AT2G36330.1 | 59.906 | 212 | 77 | 3 | 79 | 286 | 70 | 277 | 8.88e-85 | 256 |
| Msa0511440 | AT5G62820.1 | 46.358 | 302 | 127 | 8 | 19 | 292 | 3 | 297 | 1.60e-75 | 233 |
| Msa0511440 | AT5G40300.1 | 39.837 | 246 | 124 | 3 | 46 | 291 | 48 | 269 | 1.81e-56 | 183 |
| Msa0511440 | AT2G36330.2 | 53.247 | 154 | 64 | 3 | 79 | 228 | 70 | 219 | 2.83e-49 | 163 |
| Msa0511440 | AT2G38480.1 | 34.641 | 153 | 91 | 5 | 138 | 289 | 41 | 185 | 7.16e-19 | 82.8 |
| Msa0511440 | AT4G11655.1 | 34.177 | 158 | 83 | 5 | 145 | 289 | 56 | 205 | 1.08e-17 | 80.1 |
Find 93 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATCACTTTCAGTTCTTTA+TGG | 0.121664 | 3_4:+60986236 | Msa0511440:CDS |
| TGGATGATTGGCAGTCAAAT+TGG | 0.236395 | 3_4:+60986399 | Msa0511440:CDS |
| TGTTTATCTGTGAATGTTAT+CGG | 0.270069 | 3_4:+60986132 | Msa0511440:CDS |
| CCCTCGATTTCTTCATGGTT+GGG | 0.320817 | 3_4:-60985109 | None:intergenic |
| GGATGATTGGCAGTCAAATT+GGG | 0.348493 | 3_4:+60986400 | Msa0511440:CDS |
| TCTTGACCATGATTTCTTCA+TGG | 0.357914 | 3_4:-60985147 | None:intergenic |
| GAAAGGCGGCGTTAGGGTTC+CGG | 0.362154 | 3_4:+60985519 | Msa0511440:CDS |
| CCCCTCGATTTCTTCATGGT+TGG | 0.373693 | 3_4:-60985110 | None:intergenic |
| CTTTCAGTTCTTTATGGATC+AGG | 0.380415 | 3_4:+60986242 | Msa0511440:CDS |
| GTGACGAGAAAGGCGGCGTT+AGG | 0.384659 | 3_4:+60985512 | Msa0511440:CDS |
| GGAGCCCCTCGATTTCTTCA+TGG | 0.407701 | 3_4:-60985114 | None:intergenic |
| GAGAGAGGAGCCGCAACGGC+AGG | 0.412526 | 3_4:+60985406 | Msa0511440:CDS |
| GCTATGAGCTCACTCATCTC+TGG | 0.414151 | 3_4:+60986491 | Msa0511440:CDS |
| TAGCAAAAGCAGCAAAAGAT+AGG | 0.423589 | 3_4:-60986472 | None:intergenic |
| CAGCTACAAGGGTGGATGAT+TGG | 0.429800 | 3_4:+60986387 | Msa0511440:CDS |
| ATCGAGGGGCTCCGATTCTC+CGG | 0.431310 | 3_4:+60985124 | Msa0511440:CDS |
| GTCTGTTGGGTCCCATCGTA+AGG | 0.440442 | 3_4:-60985216 | None:intergenic |
| GATACTCCGGTGAGTCTGTT+GGG | 0.454369 | 3_4:-60985229 | None:intergenic |
| TTTCTTCATGGCCGGAGAAT+CGG | 0.454399 | 3_4:-60985135 | None:intergenic |
| GCGGAGAGTGAGGTCGGATT+CGG | 0.459690 | 3_4:+60985469 | Msa0511440:CDS |
| GACCATGATTTCTTCATGGC+CGG | 0.460391 | 3_4:-60985143 | None:intergenic |
| AAGCTAAGGCAGTTAACTCC+TGG | 0.475857 | 3_4:+60985323 | Msa0511440:CDS |
| CGATACTCCGGTGAGTCTGT+TGG | 0.476888 | 3_4:-60985230 | None:intergenic |
| GTTCCGGCTGTGTGAGGTGG+TGG | 0.481197 | 3_4:+60985535 | Msa0511440:CDS |
| CATCATCCTCTGCAGCTACA+AGG | 0.484996 | 3_4:+60986375 | Msa0511440:CDS |
| GTTAACTCCTGGAAAATTAA+CGG | 0.485843 | 3_4:+60985334 | Msa0511440:CDS |
| GAAGCCACCGGAGAATGCTT+TGG | 0.488342 | 3_4:+60985364 | Msa0511440:CDS |
| AAGAAGGTGGTGAGCGCGAG+CGG | 0.493113 | 3_4:+60985450 | Msa0511440:CDS |
| ATGATCGTTATAAAGAATAC+AGG | 0.496029 | 3_4:+60985621 | Msa0511440:CDS |
| CCGAGAGAGAGGAGCCGCAA+CGG | 0.496946 | 3_4:+60985402 | Msa0511440:CDS |
| CAACGGCAGGTGACGAAGGT+GGG | 0.503015 | 3_4:+60985419 | Msa0511440:CDS |
| GTCGGATTCGGTTGGAAAGA+CGG | 0.503784 | 3_4:+60985481 | Msa0511440:CDS |
| CCGTTGCGGCTCCTCTCTCT+CGG | 0.504506 | 3_4:-60985402 | None:intergenic |
| CGATCACCGGAAAACTCGCC+GGG | 0.510555 | 3_4:+60985251 | Msa0511440:CDS |
| GGTTGGAAAGACGGCGGAGG+AGG | 0.512519 | 3_4:+60985490 | Msa0511440:CDS |
| TTGACTGCGACTACTGCCAT+TGG | 0.516286 | 3_4:-60985296 | None:intergenic |
| AAACCACCACCTCACACAGC+CGG | 0.516586 | 3_4:-60985538 | None:intergenic |
| CTCCGGCCATGAAGAAATCA+TGG | 0.516869 | 3_4:+60985141 | Msa0511440:CDS |
| AGCGTTACAAGCATGTGATC+TGG | 0.525461 | 3_4:+60986167 | Msa0511440:CDS |
| GGCGGAGGAGGTGACGAGAA+AGG | 0.525850 | 3_4:+60985502 | Msa0511440:CDS |
| TGGTCACATGGAGTTGCGGC+GGG | 0.527583 | 3_4:-60986528 | None:intergenic |
| ACCACTGCCAAAGCATTCTC+CGG | 0.529515 | 3_4:-60985371 | None:intergenic |
| AAGGGAGAGCAGAAACGTGC+TGG | 0.543305 | 3_4:-60985197 | None:intergenic |
| TTGAATGCAATTTGGTCACA+TGG | 0.548465 | 3_4:-60986540 | None:intergenic |
| ACCGGAGAATGCTTTGGCAG+TGG | 0.548529 | 3_4:+60985370 | Msa0511440:CDS |
| TTCGGTTGGAAAGACGGCGG+AGG | 0.549037 | 3_4:+60985487 | Msa0511440:CDS |
| GATGATTGGCAGTCAAATTG+GGG | 0.550674 | 3_4:+60986401 | Msa0511440:CDS |
| TGACGAGAAAGGCGGCGTTA+GGG | 0.554304 | 3_4:+60985513 | Msa0511440:CDS |
| TCGATCACCGGAAAACTCGC+CGG | 0.557632 | 3_4:+60985250 | Msa0511440:CDS |
| AAGGTGGGGAACACAGAAGA+AGG | 0.557970 | 3_4:+60985434 | Msa0511440:CDS |
| GATTGAAAATTCAAATCCAA+TGG | 0.560098 | 3_4:+60985280 | Msa0511440:CDS |
| TTTCTGCTCTCCCTTACGAT+GGG | 0.565604 | 3_4:+60985205 | Msa0511440:CDS |
| AACGGCAGGTGACGAAGGTG+GGG | 0.566365 | 3_4:+60985420 | Msa0511440:CDS |
| TGGAGTTGCGGCGGGTACAA+AGG | 0.567804 | 3_4:-60986520 | None:intergenic |
| GCGGCTCCTCTCTCTCGGAT+CGG | 0.569444 | 3_4:-60985397 | None:intergenic |
| GGTCAACCGATCCGAGAGAG+AGG | 0.574020 | 3_4:+60985391 | Msa0511440:CDS |
| GTTTCTGCTCTCCCTTACGA+TGG | 0.578678 | 3_4:+60985204 | Msa0511440:CDS |
| ATGGGACCCAACAGACTCAC+CGG | 0.579685 | 3_4:+60985223 | Msa0511440:CDS |
| AGGGTTCCGGCTGTGTGAGG+TGG | 0.580499 | 3_4:+60985532 | Msa0511440:CDS |
| CTGCGAATAAGACGCAAGGT+TGG | 0.580679 | 3_4:+60985585 | Msa0511440:CDS |
| TTGGTCACATGGAGTTGCGG+CGG | 0.580848 | 3_4:-60986529 | None:intergenic |
| TTTCTCAGTGACTTGTTGAA+AGG | 0.583154 | 3_4:-60986190 | None:intergenic |
| ATCCACCCTTGTAGCTGCAG+AGG | 0.583351 | 3_4:-60986381 | None:intergenic |
| ACCTTCGTCACCTGCCGTTG+CGG | 0.587126 | 3_4:-60985416 | None:intergenic |
| GCAACGGCAGGTGACGAAGG+TGG | 0.588754 | 3_4:+60985418 | Msa0511440:CDS |
| TCGCAGTCAATGATAAGCTA+AGG | 0.589888 | 3_4:+60985309 | Msa0511440:CDS |
| AATTTGGTCACATGGAGTTG+CGG | 0.595365 | 3_4:-60986532 | None:intergenic |
| GCCGCAACGGCAGGTGACGA+AGG | 0.596577 | 3_4:+60985415 | Msa0511440:CDS |
| ATCCTCTGCAGCTACAAGGG+TGG | 0.598683 | 3_4:+60986379 | Msa0511440:CDS |
| ATCATCCTCTGCAGCTACAA+GGG | 0.601170 | 3_4:+60986376 | Msa0511440:CDS |
| AATAAGACGCAAGGTTGGAG+TGG | 0.606780 | 3_4:+60985590 | Msa0511440:CDS |
| TGATTCGAACTGAGTTGAGT+CGG | 0.607066 | 3_4:-60985174 | None:intergenic |
| GAAAGATGAGTTCACAGAGA+TGG | 0.611579 | 3_4:+60986424 | Msa0511440:CDS |
| ATGAAGAAATCATGGTCAAG+AGG | 0.612510 | 3_4:+60985149 | Msa0511440:CDS |
| GTGAGCGCGAGCGGAGAGTG+AGG | 0.614179 | 3_4:+60985459 | Msa0511440:CDS |
| GTTAGGGTTCCGGCTGTGTG+AGG | 0.619774 | 3_4:+60985529 | Msa0511440:CDS |
| ACCCAACCATGAAGAAATCG+AGG | 0.622973 | 3_4:+60985108 | Msa0511440:CDS |
| TCTGTTGGGTCCCATCGTAA+GGG | 0.629894 | 3_4:-60985215 | None:intergenic |
| ACTGAAAGTGATAGCGAAGG+TGG | 0.630747 | 3_4:-60986227 | None:intergenic |
| GCGCGAGCGGAGAGTGAGGT+CGG | 0.631538 | 3_4:+60985463 | Msa0511440:CDS |
| AGAGTGAGGTCGGATTCGGT+TGG | 0.634318 | 3_4:+60985473 | Msa0511440:CDS |
| AACGGAGCAACAGAAGCCAC+CGG | 0.645256 | 3_4:+60985352 | Msa0511440:CDS |
| CTCACCGGAGTATCGATCAC+CGG | 0.649237 | 3_4:+60985238 | Msa0511440:CDS |
| CCCAACCATGAAGAAATCGA+GGG | 0.651097 | 3_4:+60985109 | Msa0511440:CDS |
| AGAACTGAAAGTGATAGCGA+AGG | 0.655594 | 3_4:-60986230 | None:intergenic |
| ATGGCTGCGAATAAGACGCA+AGG | 0.663414 | 3_4:+60985581 | Msa0511440:CDS |
| ACTGCCAAAGCATTCTCCGG+TGG | 0.663987 | 3_4:-60985368 | None:intergenic |
| TGACATTGCAACAGAAACAG+TGG | 0.680339 | 3_4:-60986447 | None:intergenic |
| GGAGGAGGTGACGAGAAAGG+CGG | 0.687695 | 3_4:+60985505 | Msa0511440:CDS |
| GTGGGGAACACAGAAGAAGG+TGG | 0.702784 | 3_4:+60985437 | Msa0511440:CDS |
| CCAACCATGAAGAAATCGAG+GGG | 0.723739 | 3_4:+60985110 | Msa0511440:CDS |
| ATGATTGGCAGTCAAATTGG+GGG | 0.727344 | 3_4:+60986402 | Msa0511440:CDS |
| GGATTCGGTTGGAAAGACGG+CGG | 0.748237 | 3_4:+60985484 | Msa0511440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTAAAAATCATCATA+TGG | + | chr3_4:60986054-60986073 | Msa0511440:intron | 10.0% |
| !!! | ATTTTTAAAAATCATCATAT+GGG | + | chr3_4:60986055-60986074 | Msa0511440:intron | 10.0% |
| !!! | TATTTTTAAAAATCATCATA+TGG | + | chr3_4:60986054-60986073 | Msa0511440:intron | 10.0% |
| !!! | ATTTTTAAAAATCATCATAT+GGG | + | chr3_4:60986055-60986074 | Msa0511440:intron | 10.0% |
| !!! | AGAATTTTTATTTTGTTTCT+TGG | + | chr3_4:60985695-60985714 | Msa0511440:intron | 15.0% |
| !!! | AGAATTTTTATTTTGTTTCT+TGG | + | chr3_4:60985695-60985714 | Msa0511440:intron | 15.0% |
| !! | TTTATTTGCTTGAATAATCT+TGG | + | chr3_4:60985990-60986009 | Msa0511440:intron | 20.0% |
| !! | AGGATAATATAACGATAATT+TGG | - | chr3_4:60986288-60986307 | None:intergenic | 20.0% |
| !! | TTTATTTGCTTGAATAATCT+TGG | + | chr3_4:60985990-60986009 | Msa0511440:intron | 20.0% |
| !! | AGGATAATATAACGATAATT+TGG | - | chr3_4:60986288-60986307 | None:intergenic | 20.0% |
| !!! | GAATTTTCAATCATTTTTCC+CGG | - | chr3_4:60985272-60985291 | None:intergenic | 25.0% |
| ! | GATTGAAAATTCAAATCCAA+TGG | + | chr3_4:60985280-60985299 | Msa0511440:CDS | 25.0% |
| ! | ATGATCGTTATAAAGAATAC+AGG | + | chr3_4:60985621-60985640 | Msa0511440:CDS | 25.0% |
| ! | CCATAGAAATCAATTAATTC+AGG | - | chr3_4:60985664-60985683 | None:intergenic | 25.0% |
| !! | CCTGAATTAATTGATTTCTA+TGG | + | chr3_4:60985661-60985680 | Msa0511440:intron | 25.0% |
| ! | TGAACAAAATGTGATTGTTA+GGG | - | chr3_4:60985953-60985972 | None:intergenic | 25.0% |
| ! | ATGAACAAAATGTGATTGTT+AGG | - | chr3_4:60985954-60985973 | None:intergenic | 25.0% |
| ! | TGTTTATCTGTGAATGTTAT+CGG | + | chr3_4:60986132-60986151 | Msa0511440:CDS | 25.0% |
| !! | AACATGTTAGTACAATTTTG+AGG | - | chr3_4:60986308-60986327 | None:intergenic | 25.0% |
| !!! | GAATTTTCAATCATTTTTCC+CGG | - | chr3_4:60985272-60985291 | None:intergenic | 25.0% |
| ! | GATTGAAAATTCAAATCCAA+TGG | + | chr3_4:60985280-60985299 | Msa0511440:CDS | 25.0% |
| ! | ATGATCGTTATAAAGAATAC+AGG | + | chr3_4:60985621-60985640 | Msa0511440:CDS | 25.0% |
| ! | CCATAGAAATCAATTAATTC+AGG | - | chr3_4:60985664-60985683 | None:intergenic | 25.0% |
| !! | CCTGAATTAATTGATTTCTA+TGG | + | chr3_4:60985661-60985680 | Msa0511440:intron | 25.0% |
| ! | TGAACAAAATGTGATTGTTA+GGG | - | chr3_4:60985953-60985972 | None:intergenic | 25.0% |
| ! | ATGAACAAAATGTGATTGTT+AGG | - | chr3_4:60985954-60985973 | None:intergenic | 25.0% |
| ! | TGTTTATCTGTGAATGTTAT+CGG | + | chr3_4:60986132-60986151 | Msa0511440:CDS | 25.0% |
| !! | AACATGTTAGTACAATTTTG+AGG | - | chr3_4:60986308-60986327 | None:intergenic | 25.0% |
| GTTAACTCCTGGAAAATTAA+CGG | + | chr3_4:60985334-60985353 | Msa0511440:CDS | 30.0% | |
| !! | GGTTTGTTTGATTTCGTTTT+CGG | + | chr3_4:60985556-60985575 | Msa0511440:CDS | 30.0% |
| !! | TTTGATTTCGTTTTCGGTTA+TGG | + | chr3_4:60985562-60985581 | Msa0511440:CDS | 30.0% |
| !! | TTCTTGGTGATTTTCTAGAT+AGG | + | chr3_4:60985711-60985730 | Msa0511440:intron | 30.0% |
| !! | TCTTGGTGATTTTCTAGATA+GGG | + | chr3_4:60985712-60985731 | Msa0511440:intron | 30.0% |
| GAACAAAATGTGATTGTTAG+GGG | - | chr3_4:60985952-60985971 | None:intergenic | 30.0% | |
| ! | TCACATTTTGTTCATTTGCA+AGG | + | chr3_4:60985959-60985978 | Msa0511440:intron | 30.0% |
| CATTACCTTACAAATGTTGA+TGG | + | chr3_4:60986084-60986103 | Msa0511440:intron | 30.0% | |
| CTTTACCATCAACATTTGTA+AGG | - | chr3_4:60986092-60986111 | None:intergenic | 30.0% | |
| !! | CTTACAAATGTTGATGGTAA+AGG | + | chr3_4:60986090-60986109 | Msa0511440:intron | 30.0% |
| CTATCACTTTCAGTTCTTTA+TGG | + | chr3_4:60986236-60986255 | Msa0511440:CDS | 30.0% | |
| GTTAACTCCTGGAAAATTAA+CGG | + | chr3_4:60985334-60985353 | Msa0511440:CDS | 30.0% | |
| !! | GGTTTGTTTGATTTCGTTTT+CGG | + | chr3_4:60985556-60985575 | Msa0511440:CDS | 30.0% |
| !! | TTTGATTTCGTTTTCGGTTA+TGG | + | chr3_4:60985562-60985581 | Msa0511440:CDS | 30.0% |
| !! | TTCTTGGTGATTTTCTAGAT+AGG | + | chr3_4:60985711-60985730 | Msa0511440:intron | 30.0% |
| !! | TCTTGGTGATTTTCTAGATA+GGG | + | chr3_4:60985712-60985731 | Msa0511440:intron | 30.0% |
| GAACAAAATGTGATTGTTAG+GGG | - | chr3_4:60985952-60985971 | None:intergenic | 30.0% | |
| ! | TCACATTTTGTTCATTTGCA+AGG | + | chr3_4:60985959-60985978 | Msa0511440:intron | 30.0% |
| CATTACCTTACAAATGTTGA+TGG | + | chr3_4:60986084-60986103 | Msa0511440:intron | 30.0% | |
| CTTTACCATCAACATTTGTA+AGG | - | chr3_4:60986092-60986111 | None:intergenic | 30.0% | |
| !! | CTTACAAATGTTGATGGTAA+AGG | + | chr3_4:60986090-60986109 | Msa0511440:intron | 30.0% |
| CTATCACTTTCAGTTCTTTA+TGG | + | chr3_4:60986236-60986255 | Msa0511440:CDS | 30.0% | |
| TCTTGACCATGATTTCTTCA+TGG | - | chr3_4:60985150-60985169 | None:intergenic | 35.0% | |
| ATGAAGAAATCATGGTCAAG+AGG | + | chr3_4:60985149-60985168 | Msa0511440:CDS | 35.0% | |
| ! | CACTAAAGGTACATTCAACA+AGG | - | chr3_4:60985923-60985942 | None:intergenic | 35.0% |
| CTTGTTGAATGTACCTTTAG+TGG | + | chr3_4:60985921-60985940 | Msa0511440:intron | 35.0% | |
| GATGGTAAAGGTTAGTGATA+TGG | + | chr3_4:60986102-60986121 | Msa0511440:intron | 35.0% | |
| !! | TTTCTCAGTGACTTGTTGAA+AGG | - | chr3_4:60986193-60986212 | None:intergenic | 35.0% |
| CTTTCAGTTCTTTATGGATC+AGG | + | chr3_4:60986242-60986261 | Msa0511440:CDS | 35.0% | |
| TTGTGTGCAAATTGATGAGT+AGG | + | chr3_4:60986328-60986347 | Msa0511440:intron | 35.0% | |
| TAGCAAAAGCAGCAAAAGAT+AGG | - | chr3_4:60986475-60986494 | None:intergenic | 35.0% | |
| TCTTGACCATGATTTCTTCA+TGG | - | chr3_4:60985150-60985169 | None:intergenic | 35.0% | |
| ATGAAGAAATCATGGTCAAG+AGG | + | chr3_4:60985149-60985168 | Msa0511440:CDS | 35.0% | |
| ! | CACTAAAGGTACATTCAACA+AGG | - | chr3_4:60985923-60985942 | None:intergenic | 35.0% |
| CTTGTTGAATGTACCTTTAG+TGG | + | chr3_4:60985921-60985940 | Msa0511440:intron | 35.0% | |
| GATGGTAAAGGTTAGTGATA+TGG | + | chr3_4:60986102-60986121 | Msa0511440:intron | 35.0% | |
| !! | TTTCTCAGTGACTTGTTGAA+AGG | - | chr3_4:60986193-60986212 | None:intergenic | 35.0% |
| CTTTCAGTTCTTTATGGATC+AGG | + | chr3_4:60986242-60986261 | Msa0511440:CDS | 35.0% | |
| TTGTGTGCAAATTGATGAGT+AGG | + | chr3_4:60986328-60986347 | Msa0511440:intron | 35.0% | |
| TAGCAAAAGCAGCAAAAGAT+AGG | - | chr3_4:60986475-60986494 | None:intergenic | 35.0% | |
| ! | TGATTCGAACTGAGTTGAGT+CGG | - | chr3_4:60985177-60985196 | None:intergenic | 40.0% |
| TCGCAGTCAATGATAAGCTA+AGG | + | chr3_4:60985309-60985328 | Msa0511440:CDS | 40.0% | |
| ! | TGTTGCTCCGTTAATTTTCC+AGG | - | chr3_4:60985344-60985363 | None:intergenic | 40.0% |
| GTAAAGGTTAGTGATATGGC+AGG | + | chr3_4:60986106-60986125 | Msa0511440:intron | 40.0% | |
| ! | AGAACTGAAAGTGATAGCGA+AGG | - | chr3_4:60986233-60986252 | None:intergenic | 40.0% |
| GCAAATTGATGAGTAGGTTG+TGG | + | chr3_4:60986334-60986353 | Msa0511440:intron | 40.0% | |
| TGGATGATTGGCAGTCAAAT+TGG | + | chr3_4:60986399-60986418 | Msa0511440:CDS | 40.0% | |
| GGATGATTGGCAGTCAAATT+GGG | + | chr3_4:60986400-60986419 | Msa0511440:CDS | 40.0% | |
| GATGATTGGCAGTCAAATTG+GGG | + | chr3_4:60986401-60986420 | Msa0511440:CDS | 40.0% | |
| ATGATTGGCAGTCAAATTGG+GGG | + | chr3_4:60986402-60986421 | Msa0511440:CDS | 40.0% | |
| GAAAGATGAGTTCACAGAGA+TGG | + | chr3_4:60986424-60986443 | Msa0511440:CDS | 40.0% | |
| TGACATTGCAACAGAAACAG+TGG | - | chr3_4:60986450-60986469 | None:intergenic | 40.0% | |
| ! | TGATTCGAACTGAGTTGAGT+CGG | - | chr3_4:60985177-60985196 | None:intergenic | 40.0% |
| TCGCAGTCAATGATAAGCTA+AGG | + | chr3_4:60985309-60985328 | Msa0511440:CDS | 40.0% | |
| ! | TGTTGCTCCGTTAATTTTCC+AGG | - | chr3_4:60985344-60985363 | None:intergenic | 40.0% |
| GTAAAGGTTAGTGATATGGC+AGG | + | chr3_4:60986106-60986125 | Msa0511440:intron | 40.0% | |
| ! | AGAACTGAAAGTGATAGCGA+AGG | - | chr3_4:60986233-60986252 | None:intergenic | 40.0% |
| GCAAATTGATGAGTAGGTTG+TGG | + | chr3_4:60986334-60986353 | Msa0511440:intron | 40.0% | |
| TGGATGATTGGCAGTCAAAT+TGG | + | chr3_4:60986399-60986418 | Msa0511440:CDS | 40.0% | |
| GGATGATTGGCAGTCAAATT+GGG | + | chr3_4:60986400-60986419 | Msa0511440:CDS | 40.0% | |
| GATGATTGGCAGTCAAATTG+GGG | + | chr3_4:60986401-60986420 | Msa0511440:CDS | 40.0% | |
| ATGATTGGCAGTCAAATTGG+GGG | + | chr3_4:60986402-60986421 | Msa0511440:CDS | 40.0% | |
| GAAAGATGAGTTCACAGAGA+TGG | + | chr3_4:60986424-60986443 | Msa0511440:CDS | 40.0% | |
| TGACATTGCAACAGAAACAG+TGG | - | chr3_4:60986450-60986469 | None:intergenic | 40.0% | |
| ACCCAACCATGAAGAAATCG+AGG | + | chr3_4:60985108-60985127 | Msa0511440:CDS | 45.0% | |
| CCCTCGATTTCTTCATGGTT+GGG | - | chr3_4:60985112-60985131 | None:intergenic | 45.0% | |
| CCCAACCATGAAGAAATCGA+GGG | + | chr3_4:60985109-60985128 | Msa0511440:CDS | 45.0% | |
| CCAACCATGAAGAAATCGAG+GGG | + | chr3_4:60985110-60985129 | Msa0511440:CDS | 45.0% | |
| TTTCTTCATGGCCGGAGAAT+CGG | - | chr3_4:60985138-60985157 | None:intergenic | 45.0% | |
| GACCATGATTTCTTCATGGC+CGG | - | chr3_4:60985146-60985165 | None:intergenic | 45.0% | |
| TTTCTGCTCTCCCTTACGAT+GGG | + | chr3_4:60985205-60985224 | Msa0511440:CDS | 45.0% | |
| ! | TTTTCCGGTGATCGATACTC+CGG | - | chr3_4:60985245-60985264 | None:intergenic | 45.0% |
| ! | ATTTTTCCCGGCGAGTTTTC+CGG | - | chr3_4:60985260-60985279 | None:intergenic | 45.0% |
| AAGCTAAGGCAGTTAACTCC+TGG | + | chr3_4:60985323-60985342 | Msa0511440:CDS | 45.0% | |
| AATAAGACGCAAGGTTGGAG+TGG | + | chr3_4:60985590-60985609 | Msa0511440:CDS | 45.0% | |
| GTTAGGGGAAACTCCACTAA+AGG | - | chr3_4:60985937-60985956 | None:intergenic | 45.0% | |
| AGCGTTACAAGCATGTGATC+TGG | + | chr3_4:60986167-60986186 | Msa0511440:CDS | 45.0% | |
| ! | ACTGAAAGTGATAGCGAAGG+TGG | - | chr3_4:60986230-60986249 | None:intergenic | 45.0% |
| ATCATCCTCTGCAGCTACAA+GGG | + | chr3_4:60986376-60986395 | Msa0511440:CDS | 45.0% | |
| ACCCAACCATGAAGAAATCG+AGG | + | chr3_4:60985108-60985127 | Msa0511440:CDS | 45.0% | |
| CCCTCGATTTCTTCATGGTT+GGG | - | chr3_4:60985112-60985131 | None:intergenic | 45.0% | |
| CCCAACCATGAAGAAATCGA+GGG | + | chr3_4:60985109-60985128 | Msa0511440:CDS | 45.0% | |
| CCAACCATGAAGAAATCGAG+GGG | + | chr3_4:60985110-60985129 | Msa0511440:CDS | 45.0% | |
| TTTCTTCATGGCCGGAGAAT+CGG | - | chr3_4:60985138-60985157 | None:intergenic | 45.0% | |
| GACCATGATTTCTTCATGGC+CGG | - | chr3_4:60985146-60985165 | None:intergenic | 45.0% | |
| TTTCTGCTCTCCCTTACGAT+GGG | + | chr3_4:60985205-60985224 | Msa0511440:CDS | 45.0% | |
| ! | TTTTCCGGTGATCGATACTC+CGG | - | chr3_4:60985245-60985264 | None:intergenic | 45.0% |
| ! | ATTTTTCCCGGCGAGTTTTC+CGG | - | chr3_4:60985260-60985279 | None:intergenic | 45.0% |
| AAGCTAAGGCAGTTAACTCC+TGG | + | chr3_4:60985323-60985342 | Msa0511440:CDS | 45.0% | |
| AATAAGACGCAAGGTTGGAG+TGG | + | chr3_4:60985590-60985609 | Msa0511440:CDS | 45.0% | |
| GTTAGGGGAAACTCCACTAA+AGG | - | chr3_4:60985937-60985956 | None:intergenic | 45.0% | |
| AGCGTTACAAGCATGTGATC+TGG | + | chr3_4:60986167-60986186 | Msa0511440:CDS | 45.0% | |
| ! | ACTGAAAGTGATAGCGAAGG+TGG | - | chr3_4:60986230-60986249 | None:intergenic | 45.0% |
| ATCATCCTCTGCAGCTACAA+GGG | + | chr3_4:60986376-60986395 | Msa0511440:CDS | 45.0% | |
| CCCCTCGATTTCTTCATGGT+TGG | - | chr3_4:60985113-60985132 | None:intergenic | 50.0% | |
| CTCCGGCCATGAAGAAATCA+TGG | + | chr3_4:60985141-60985160 | Msa0511440:CDS | 50.0% | |
| GTTTCTGCTCTCCCTTACGA+TGG | + | chr3_4:60985204-60985223 | Msa0511440:CDS | 50.0% | |
| TCTGTTGGGTCCCATCGTAA+GGG | - | chr3_4:60985218-60985237 | None:intergenic | 50.0% | |
| GATACTCCGGTGAGTCTGTT+GGG | - | chr3_4:60985232-60985251 | None:intergenic | 50.0% | |
| TTGACTGCGACTACTGCCAT+TGG | - | chr3_4:60985299-60985318 | None:intergenic | 50.0% | |
| ! | ACCACTGCCAAAGCATTCTC+CGG | - | chr3_4:60985374-60985393 | None:intergenic | 50.0% |
| AAGGTGGGGAACACAGAAGA+AGG | + | chr3_4:60985434-60985453 | Msa0511440:CDS | 50.0% | |
| ! | GTCGGATTCGGTTGGAAAGA+CGG | + | chr3_4:60985481-60985500 | Msa0511440:CDS | 50.0% |
| ATGGCTGCGAATAAGACGCA+AGG | + | chr3_4:60985581-60985600 | Msa0511440:CDS | 50.0% | |
| CTGCGAATAAGACGCAAGGT+TGG | + | chr3_4:60985585-60985604 | Msa0511440:CDS | 50.0% | |
| CATCATCCTCTGCAGCTACA+AGG | + | chr3_4:60986375-60986394 | Msa0511440:CDS | 50.0% | |
| CAGCTACAAGGGTGGATGAT+TGG | + | chr3_4:60986387-60986406 | Msa0511440:CDS | 50.0% | |
| GCTATGAGCTCACTCATCTC+TGG | + | chr3_4:60986491-60986510 | Msa0511440:CDS | 50.0% | |
| CCCCTCGATTTCTTCATGGT+TGG | - | chr3_4:60985113-60985132 | None:intergenic | 50.0% | |
| CTCCGGCCATGAAGAAATCA+TGG | + | chr3_4:60985141-60985160 | Msa0511440:CDS | 50.0% | |
| GTTTCTGCTCTCCCTTACGA+TGG | + | chr3_4:60985204-60985223 | Msa0511440:CDS | 50.0% | |
| TCTGTTGGGTCCCATCGTAA+GGG | - | chr3_4:60985218-60985237 | None:intergenic | 50.0% | |
| GATACTCCGGTGAGTCTGTT+GGG | - | chr3_4:60985232-60985251 | None:intergenic | 50.0% | |
| TTGACTGCGACTACTGCCAT+TGG | - | chr3_4:60985299-60985318 | None:intergenic | 50.0% | |
| ! | ACCACTGCCAAAGCATTCTC+CGG | - | chr3_4:60985374-60985393 | None:intergenic | 50.0% |
| AAGGTGGGGAACACAGAAGA+AGG | + | chr3_4:60985434-60985453 | Msa0511440:CDS | 50.0% | |
| ! | GTCGGATTCGGTTGGAAAGA+CGG | + | chr3_4:60985481-60985500 | Msa0511440:CDS | 50.0% |
| ATGGCTGCGAATAAGACGCA+AGG | + | chr3_4:60985581-60985600 | Msa0511440:CDS | 50.0% | |
| CTGCGAATAAGACGCAAGGT+TGG | + | chr3_4:60985585-60985604 | Msa0511440:CDS | 50.0% | |
| CATCATCCTCTGCAGCTACA+AGG | + | chr3_4:60986375-60986394 | Msa0511440:CDS | 50.0% | |
| CAGCTACAAGGGTGGATGAT+TGG | + | chr3_4:60986387-60986406 | Msa0511440:CDS | 50.0% | |
| GCTATGAGCTCACTCATCTC+TGG | + | chr3_4:60986491-60986510 | Msa0511440:CDS | 50.0% | |
| GGAGCCCCTCGATTTCTTCA+TGG | - | chr3_4:60985117-60985136 | None:intergenic | 55.0% | |
| AAGGGAGAGCAGAAACGTGC+TGG | - | chr3_4:60985200-60985219 | None:intergenic | 55.0% | |
| GTCTGTTGGGTCCCATCGTA+AGG | - | chr3_4:60985219-60985238 | None:intergenic | 55.0% | |
| ATGGGACCCAACAGACTCAC+CGG | + | chr3_4:60985223-60985242 | Msa0511440:CDS | 55.0% | |
| CGATACTCCGGTGAGTCTGT+TGG | - | chr3_4:60985233-60985252 | None:intergenic | 55.0% | |
| !! | CTCACCGGAGTATCGATCAC+CGG | + | chr3_4:60985238-60985257 | Msa0511440:CDS | 55.0% |
| TCGATCACCGGAAAACTCGC+CGG | + | chr3_4:60985250-60985269 | Msa0511440:CDS | 55.0% | |
| AACGGAGCAACAGAAGCCAC+CGG | + | chr3_4:60985352-60985371 | Msa0511440:CDS | 55.0% | |
| GAAGCCACCGGAGAATGCTT+TGG | + | chr3_4:60985364-60985383 | Msa0511440:CDS | 55.0% | |
| ! | ACTGCCAAAGCATTCTCCGG+TGG | - | chr3_4:60985371-60985390 | None:intergenic | 55.0% |
| ACCGGAGAATGCTTTGGCAG+TGG | + | chr3_4:60985370-60985389 | Msa0511440:CDS | 55.0% | |
| GTGGGGAACACAGAAGAAGG+TGG | + | chr3_4:60985437-60985456 | Msa0511440:CDS | 55.0% | |
| ! | AGAGTGAGGTCGGATTCGGT+TGG | + | chr3_4:60985473-60985492 | Msa0511440:CDS | 55.0% |
| ! | GGATTCGGTTGGAAAGACGG+CGG | + | chr3_4:60985484-60985503 | Msa0511440:CDS | 55.0% |
| TGACGAGAAAGGCGGCGTTA+GGG | + | chr3_4:60985513-60985532 | Msa0511440:CDS | 55.0% | |
| AAACCACCACCTCACACAGC+CGG | - | chr3_4:60985541-60985560 | None:intergenic | 55.0% | |
| ATCCTCTGCAGCTACAAGGG+TGG | + | chr3_4:60986379-60986398 | Msa0511440:CDS | 55.0% | |
| ATCCACCCTTGTAGCTGCAG+AGG | - | chr3_4:60986384-60986403 | None:intergenic | 55.0% | |
| GGAGCCCCTCGATTTCTTCA+TGG | - | chr3_4:60985117-60985136 | None:intergenic | 55.0% | |
| AAGGGAGAGCAGAAACGTGC+TGG | - | chr3_4:60985200-60985219 | None:intergenic | 55.0% | |
| GTCTGTTGGGTCCCATCGTA+AGG | - | chr3_4:60985219-60985238 | None:intergenic | 55.0% | |
| ATGGGACCCAACAGACTCAC+CGG | + | chr3_4:60985223-60985242 | Msa0511440:CDS | 55.0% | |
| CGATACTCCGGTGAGTCTGT+TGG | - | chr3_4:60985233-60985252 | None:intergenic | 55.0% | |
| !! | CTCACCGGAGTATCGATCAC+CGG | + | chr3_4:60985238-60985257 | Msa0511440:CDS | 55.0% |
| TCGATCACCGGAAAACTCGC+CGG | + | chr3_4:60985250-60985269 | Msa0511440:CDS | 55.0% | |
| AACGGAGCAACAGAAGCCAC+CGG | + | chr3_4:60985352-60985371 | Msa0511440:CDS | 55.0% | |
| GAAGCCACCGGAGAATGCTT+TGG | + | chr3_4:60985364-60985383 | Msa0511440:CDS | 55.0% | |
| ! | ACTGCCAAAGCATTCTCCGG+TGG | - | chr3_4:60985371-60985390 | None:intergenic | 55.0% |
| ACCGGAGAATGCTTTGGCAG+TGG | + | chr3_4:60985370-60985389 | Msa0511440:CDS | 55.0% | |
| GTGGGGAACACAGAAGAAGG+TGG | + | chr3_4:60985437-60985456 | Msa0511440:CDS | 55.0% | |
| ! | AGAGTGAGGTCGGATTCGGT+TGG | + | chr3_4:60985473-60985492 | Msa0511440:CDS | 55.0% |
| ! | GGATTCGGTTGGAAAGACGG+CGG | + | chr3_4:60985484-60985503 | Msa0511440:CDS | 55.0% |
| TGACGAGAAAGGCGGCGTTA+GGG | + | chr3_4:60985513-60985532 | Msa0511440:CDS | 55.0% | |
| AAACCACCACCTCACACAGC+CGG | - | chr3_4:60985541-60985560 | None:intergenic | 55.0% | |
| ATCCTCTGCAGCTACAAGGG+TGG | + | chr3_4:60986379-60986398 | Msa0511440:CDS | 55.0% | |
| ATCCACCCTTGTAGCTGCAG+AGG | - | chr3_4:60986384-60986403 | None:intergenic | 55.0% | |
| ATCGAGGGGCTCCGATTCTC+CGG | + | chr3_4:60985124-60985143 | Msa0511440:CDS | 60.0% | |
| CGATCACCGGAAAACTCGCC+GGG | + | chr3_4:60985251-60985270 | Msa0511440:CDS | 60.0% | |
| GGTCAACCGATCCGAGAGAG+AGG | + | chr3_4:60985391-60985410 | Msa0511440:CDS | 60.0% | |
| ACCTTCGTCACCTGCCGTTG+CGG | - | chr3_4:60985419-60985438 | None:intergenic | 60.0% | |
| CAACGGCAGGTGACGAAGGT+GGG | + | chr3_4:60985419-60985438 | Msa0511440:CDS | 60.0% | |
| AACGGCAGGTGACGAAGGTG+GGG | + | chr3_4:60985420-60985439 | Msa0511440:CDS | 60.0% | |
| AAGAAGGTGGTGAGCGCGAG+CGG | + | chr3_4:60985450-60985469 | Msa0511440:CDS | 60.0% | |
| GCGGAGAGTGAGGTCGGATT+CGG | + | chr3_4:60985469-60985488 | Msa0511440:CDS | 60.0% | |
| TTCGGTTGGAAAGACGGCGG+AGG | + | chr3_4:60985487-60985506 | Msa0511440:CDS | 60.0% | |
| GGAGGAGGTGACGAGAAAGG+CGG | + | chr3_4:60985505-60985524 | Msa0511440:CDS | 60.0% | |
| GTGACGAGAAAGGCGGCGTT+AGG | + | chr3_4:60985512-60985531 | Msa0511440:CDS | 60.0% | |
| GAAAGGCGGCGTTAGGGTTC+CGG | + | chr3_4:60985519-60985538 | Msa0511440:CDS | 60.0% | |
| GTTAGGGTTCCGGCTGTGTG+AGG | + | chr3_4:60985529-60985548 | Msa0511440:CDS | 60.0% | |
| TGGAGTTGCGGCGGGTACAA+AGG | - | chr3_4:60986523-60986542 | None:intergenic | 60.0% | |
| ATCGAGGGGCTCCGATTCTC+CGG | + | chr3_4:60985124-60985143 | Msa0511440:CDS | 60.0% | |
| CGATCACCGGAAAACTCGCC+GGG | + | chr3_4:60985251-60985270 | Msa0511440:CDS | 60.0% | |
| GGTCAACCGATCCGAGAGAG+AGG | + | chr3_4:60985391-60985410 | Msa0511440:CDS | 60.0% | |
| ACCTTCGTCACCTGCCGTTG+CGG | - | chr3_4:60985419-60985438 | None:intergenic | 60.0% | |
| CAACGGCAGGTGACGAAGGT+GGG | + | chr3_4:60985419-60985438 | Msa0511440:CDS | 60.0% | |
| AACGGCAGGTGACGAAGGTG+GGG | + | chr3_4:60985420-60985439 | Msa0511440:CDS | 60.0% | |
| AAGAAGGTGGTGAGCGCGAG+CGG | + | chr3_4:60985450-60985469 | Msa0511440:CDS | 60.0% | |
| GCGGAGAGTGAGGTCGGATT+CGG | + | chr3_4:60985469-60985488 | Msa0511440:CDS | 60.0% | |
| TTCGGTTGGAAAGACGGCGG+AGG | + | chr3_4:60985487-60985506 | Msa0511440:CDS | 60.0% | |
| GGAGGAGGTGACGAGAAAGG+CGG | + | chr3_4:60985505-60985524 | Msa0511440:CDS | 60.0% | |
| GTGACGAGAAAGGCGGCGTT+AGG | + | chr3_4:60985512-60985531 | Msa0511440:CDS | 60.0% | |
| GAAAGGCGGCGTTAGGGTTC+CGG | + | chr3_4:60985519-60985538 | Msa0511440:CDS | 60.0% | |
| GTTAGGGTTCCGGCTGTGTG+AGG | + | chr3_4:60985529-60985548 | Msa0511440:CDS | 60.0% | |
| TGGAGTTGCGGCGGGTACAA+AGG | - | chr3_4:60986523-60986542 | None:intergenic | 60.0% | |
| GCGGCTCCTCTCTCTCGGAT+CGG | - | chr3_4:60985400-60985419 | None:intergenic | 65.0% | |
| CCGTTGCGGCTCCTCTCTCT+CGG | - | chr3_4:60985405-60985424 | None:intergenic | 65.0% | |
| CCGAGAGAGAGGAGCCGCAA+CGG | + | chr3_4:60985402-60985421 | Msa0511440:CDS | 65.0% | |
| GCAACGGCAGGTGACGAAGG+TGG | + | chr3_4:60985418-60985437 | Msa0511440:CDS | 65.0% | |
| GGTTGGAAAGACGGCGGAGG+AGG | + | chr3_4:60985490-60985509 | Msa0511440:CDS | 65.0% | |
| GGCGGAGGAGGTGACGAGAA+AGG | + | chr3_4:60985502-60985521 | Msa0511440:CDS | 65.0% | |
| AGGGTTCCGGCTGTGTGAGG+TGG | + | chr3_4:60985532-60985551 | Msa0511440:CDS | 65.0% | |
| GTTCCGGCTGTGTGAGGTGG+TGG | + | chr3_4:60985535-60985554 | Msa0511440:CDS | 65.0% | |
| GCGGCTCCTCTCTCTCGGAT+CGG | - | chr3_4:60985400-60985419 | None:intergenic | 65.0% | |
| CCGTTGCGGCTCCTCTCTCT+CGG | - | chr3_4:60985405-60985424 | None:intergenic | 65.0% | |
| CCGAGAGAGAGGAGCCGCAA+CGG | + | chr3_4:60985402-60985421 | Msa0511440:CDS | 65.0% | |
| GCAACGGCAGGTGACGAAGG+TGG | + | chr3_4:60985418-60985437 | Msa0511440:CDS | 65.0% | |
| GGTTGGAAAGACGGCGGAGG+AGG | + | chr3_4:60985490-60985509 | Msa0511440:CDS | 65.0% | |
| GGCGGAGGAGGTGACGAGAA+AGG | + | chr3_4:60985502-60985521 | Msa0511440:CDS | 65.0% | |
| AGGGTTCCGGCTGTGTGAGG+TGG | + | chr3_4:60985532-60985551 | Msa0511440:CDS | 65.0% | |
| GTTCCGGCTGTGTGAGGTGG+TGG | + | chr3_4:60985535-60985554 | Msa0511440:CDS | 65.0% | |
| GAGAGAGGAGCCGCAACGGC+AGG | + | chr3_4:60985406-60985425 | Msa0511440:CDS | 70.0% | |
| GCCGCAACGGCAGGTGACGA+AGG | + | chr3_4:60985415-60985434 | Msa0511440:CDS | 70.0% | |
| GTGAGCGCGAGCGGAGAGTG+AGG | + | chr3_4:60985459-60985478 | Msa0511440:CDS | 70.0% | |
| GCGCGAGCGGAGAGTGAGGT+CGG | + | chr3_4:60985463-60985482 | Msa0511440:CDS | 70.0% | |
| GAGAGAGGAGCCGCAACGGC+AGG | + | chr3_4:60985406-60985425 | Msa0511440:CDS | 70.0% | |
| GCCGCAACGGCAGGTGACGA+AGG | + | chr3_4:60985415-60985434 | Msa0511440:CDS | 70.0% | |
| GTGAGCGCGAGCGGAGAGTG+AGG | + | chr3_4:60985459-60985478 | Msa0511440:CDS | 70.0% | |
| GCGCGAGCGGAGAGTGAGGT+CGG | + | chr3_4:60985463-60985482 | Msa0511440:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 60985095 | 60986547 | 60985095 | ID=Msa0511440;Name=Msa0511440 |
| chr3_4 | mRNA | 60985095 | 60986547 | 60985095 | ID=Msa0511440-mRNA-1;Parent=Msa0511440;Name=Msa0511440-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|3|0|293 |
| chr3_4 | exon | 60985095 | 60985642 | 60985095 | ID=Msa0511440-mRNA-1:exon:14712;Parent=Msa0511440-mRNA-1 |
| chr3_4 | exon | 60986128 | 60986263 | 60986128 | ID=Msa0511440-mRNA-1:exon:14713;Parent=Msa0511440-mRNA-1 |
| chr3_4 | exon | 60986350 | 60986547 | 60986350 | ID=Msa0511440-mRNA-1:exon:14714;Parent=Msa0511440-mRNA-1 |
| chr3_4 | CDS | 60985095 | 60985642 | 60985095 | ID=Msa0511440-mRNA-1:cds;Parent=Msa0511440-mRNA-1 |
| chr3_4 | CDS | 60986128 | 60986263 | 60986128 | ID=Msa0511440-mRNA-1:cds;Parent=Msa0511440-mRNA-1 |
| chr3_4 | CDS | 60986350 | 60986547 | 60986350 | ID=Msa0511440-mRNA-1:cds;Parent=Msa0511440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
