Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465500 | XP_003601282.1 | 88.215 | 297 | 9 | 3 | 1 | 272 | 1 | 296 | 0.0 | 524 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465500 | sp|Q84WP5|CSPL8_ARATH | 53.774 | 212 | 69 | 4 | 79 | 265 | 70 | 277 | 5.11e-68 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465500 | G7J5H7 | 88.215 | 297 | 9 | 3 | 1 | 272 | 1 | 296 | 0.0 | 524 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0077340 | Msa0465500 | 0.809346 | 1.980142e-50 | -8.615850e-47 |
| Msa0122530 | Msa0465500 | 0.806660 | 7.386517e-50 | -8.615850e-47 |
| Msa0152850 | Msa0465500 | 0.825609 | 4.270199e-54 | -8.615850e-47 |
| Msa0189420 | Msa0465500 | 0.804991 | 1.656122e-49 | -8.615850e-47 |
| Msa0209140 | Msa0465500 | 0.807077 | 6.028221e-50 | -8.615850e-47 |
| Msa0402070 | Msa0465500 | -0.840918 | 6.509436e-58 | -8.615850e-47 |
| Msa0423550 | Msa0465500 | 0.963690 | 2.146890e-122 | -8.615850e-47 |
| Msa0424160 | Msa0465500 | 0.807535 | 4.821828e-50 | -8.615850e-47 |
| Msa0439960 | Msa0465500 | 0.804972 | 1.671254e-49 | -8.615850e-47 |
| Msa0465500 | Msa0511440 | 0.965807 | 4.369884e-125 | -8.615850e-47 |
| Msa0465500 | Msa0515800 | 0.815709 | 8.045212e-52 | -8.615850e-47 |
| Msa0465500 | Msa0570120 | 0.807051 | 6.104359e-50 | -8.615850e-47 |
| Msa0465500 | Msa0611640 | 0.800487 | 1.408517e-48 | -8.615850e-47 |
| Msa0465500 | Msa0693330 | 0.850763 | 1.375644e-60 | -8.615850e-47 |
| Msa0465500 | Msa0702720 | 0.825274 | 5.124879e-54 | -8.615850e-47 |
| Msa0465500 | Msa0703950 | 0.802560 | 5.295168e-49 | -8.615850e-47 |
| Msa0465500 | Msa0752450 | 0.823762 | 1.163414e-53 | -8.615850e-47 |
| Msa0465500 | Msa0795750 | 0.811047 | 8.509006e-51 | -8.615850e-47 |
| Msa0465500 | Msa0829330 | 0.807294 | 5.422017e-50 | -8.615850e-47 |
| Msa0465500 | Msa0833530 | 0.803018 | 4.257698e-49 | -8.615850e-47 |
| Msa0465500 | Msa0841860 | 0.812805 | 3.523304e-51 | -8.615850e-47 |
| Msa0465500 | Msa0851850 | 0.808100 | 3.655825e-50 | -8.615850e-47 |
| Msa0465500 | Msa0972680 | 0.802953 | 4.392503e-49 | -8.615850e-47 |
| Msa0465500 | Msa0992510 | 0.809144 | 2.187335e-50 | -8.615850e-47 |
| Msa0465500 | Msa1021590 | 0.803620 | 3.195653e-49 | -8.615850e-47 |
| Msa0465500 | Msa1044680 | 0.808102 | 3.652791e-50 | -8.615850e-47 |
| Msa0465500 | Msa1101880 | 0.809081 | 2.256496e-50 | -8.615850e-47 |
| Msa0465500 | Msa1106590 | 0.812133 | 4.941017e-51 | -8.615850e-47 |
| Msa0465500 | Msa1184230 | 0.801249 | 9.843711e-49 | -8.615850e-47 |
| Msa0465500 | Msa1212830 | 0.813079 | 3.069041e-51 | -8.615850e-47 |
| Msa0465500 | Msa1213040 | 0.844599 | 6.840634e-59 | -8.615850e-47 |
| Msa0465500 | Msa1228040 | 0.850010 | 2.238322e-60 | -8.615850e-47 |
| Msa0465500 | Msa1238660 | 0.811018 | 8.634997e-51 | -8.615850e-47 |
| Msa0465500 | Msa1260220 | 0.826725 | 2.316972e-54 | -8.615850e-47 |
| Msa0465500 | Msa1271130 | 0.800913 | 1.153223e-48 | -8.615850e-47 |
| Msa0465500 | Msa1308220 | 0.845535 | 3.822294e-59 | -8.615850e-47 |
| Msa0465500 | Msa1341840 | 0.810603 | 1.061907e-50 | -8.615850e-47 |
| Msa0465500 | Msa1405460 | 0.800606 | 1.331709e-48 | -8.615850e-47 |
| Msa0465500 | Msa1454500 | 0.815666 | 8.225772e-52 | -8.615850e-47 |
| Msa0465500 | Msa1461370 | 0.805118 | 1.557697e-49 | -8.615850e-47 |
| Msa0465500 | Msa1463950 | 0.811764 | 5.946539e-51 | -8.615850e-47 |
| Msa0309970 | Msa0465500 | 0.803525 | 3.344640e-49 | -8.615850e-47 |
| Msa0309990 | Msa0465500 | 0.814869 | 1.236912e-51 | -8.615850e-47 |
| Msa0315520 | Msa0465500 | 0.803309 | 3.706608e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465500 | MtrunA17_Chr3g0117741 | 88.215 | 297 | 9 | 3 | 1 | 272 | 1 | 296 | 0.0 | 524 |
| Msa0465500 | MtrunA17_Chr4g0059141 | 47.440 | 293 | 104 | 9 | 19 | 268 | 1 | 286 | 1.09e-74 | 229 |
| Msa0465500 | MtrunA17_Chr7g0228001 | 40.000 | 205 | 67 | 4 | 121 | 269 | 124 | 328 | 5.77e-34 | 125 |
| Msa0465500 | MtrunA17_Chr6g0450781 | 33.036 | 224 | 92 | 7 | 100 | 266 | 9 | 231 | 4.78e-20 | 86.3 |
| Msa0465500 | MtrunA17_Chr4g0004941 | 34.228 | 149 | 74 | 4 | 138 | 265 | 38 | 183 | 2.94e-18 | 80.5 |
| Msa0465500 | MtrunA17_Chr7g0243881 | 31.579 | 152 | 80 | 3 | 138 | 268 | 51 | 199 | 3.16e-18 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465500 | AT2G36330.1 | 53.774 | 212 | 69 | 4 | 79 | 265 | 70 | 277 | 5.19e-69 | 215 |
| Msa0465500 | AT5G62820.1 | 44.040 | 302 | 113 | 9 | 19 | 271 | 3 | 297 | 5.75e-68 | 213 |
| Msa0465500 | AT5G40300.1 | 37.398 | 246 | 109 | 4 | 46 | 270 | 48 | 269 | 1.66e-48 | 162 |
| Msa0465500 | AT2G36330.2 | 51.064 | 141 | 61 | 3 | 79 | 215 | 70 | 206 | 7.58e-39 | 135 |
| Msa0465500 | AT2G38480.1 | 34.228 | 149 | 76 | 5 | 138 | 268 | 41 | 185 | 8.15e-17 | 77.0 |
| Msa0465500 | AT4G11655.1 | 32.026 | 153 | 70 | 5 | 146 | 268 | 57 | 205 | 7.17e-14 | 69.3 |
Find 89 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATGATTGGCAGTCAAAT+TGG | 0.236395 | 3_3:-65909168 | Msa0465500:CDS |
| TGTTTATCTGTGAATGTTAT+CGG | 0.270069 | 3_3:-65909435 | Msa0465500:CDS |
| CCCTCGATTTCTTCATGGTT+GGG | 0.320817 | 3_3:+65910423 | None:intergenic |
| GGATGATTGGCAGTCAAATT+GGG | 0.348493 | 3_3:-65909167 | Msa0465500:CDS |
| TCTTGACCATGATTTCTTCA+TGG | 0.357914 | 3_3:+65910385 | None:intergenic |
| GAAAGGCGGCGTTAGGGTTC+CGG | 0.362154 | 3_3:-65910013 | Msa0465500:CDS |
| CCCCTCGATTTCTTCATGGT+TGG | 0.373693 | 3_3:+65910422 | None:intergenic |
| GTGACGAGAAAGGCGGCGTT+AGG | 0.384659 | 3_3:-65910020 | Msa0465500:CDS |
| GGAGCCCCTCGATTTCTTCA+TGG | 0.407701 | 3_3:+65910418 | None:intergenic |
| GAGAGAGGAGCCGCAACGGC+AGG | 0.412526 | 3_3:-65910126 | Msa0465500:CDS |
| GCTATGAGCTCACTCATCTC+TGG | 0.414151 | 3_3:-65909076 | Msa0465500:CDS |
| TAGCAAAAGCAGCAAAAGAT+AGG | 0.423589 | 3_3:+65909095 | None:intergenic |
| CAGCTACAAGGGTGGATGAT+TGG | 0.429800 | 3_3:-65909180 | Msa0465500:CDS |
| ATCGAGGGGCTCCGATTCTC+CGG | 0.431310 | 3_3:-65910408 | Msa0465500:CDS |
| GTCTGTTGGGTCCCATCGTA+AGG | 0.440442 | 3_3:+65910316 | None:intergenic |
| GATACTCCGGTGAGTCTGTT+GGG | 0.454369 | 3_3:+65910303 | None:intergenic |
| TTTCTTCATGGCCGGAGAAT+CGG | 0.454399 | 3_3:+65910397 | None:intergenic |
| GCGGAGAGTGAGGTCGGATT+CGG | 0.459690 | 3_3:-65910063 | Msa0465500:CDS |
| GACCATGATTTCTTCATGGC+CGG | 0.460391 | 3_3:+65910389 | None:intergenic |
| AAGCTAAGGCAGTTAACTCC+TGG | 0.475857 | 3_3:-65910209 | Msa0465500:CDS |
| CGATACTCCGGTGAGTCTGT+TGG | 0.476888 | 3_3:+65910302 | None:intergenic |
| GTTCCGGCTGTGTGAGGTGG+TGG | 0.481197 | 3_3:-65909997 | Msa0465500:CDS |
| CATCATCCTCTGCAGCTACA+AGG | 0.484996 | 3_3:-65909192 | Msa0465500:CDS |
| GTTAACTCCTGGAAAATTAA+CGG | 0.485843 | 3_3:-65910198 | Msa0465500:CDS |
| GAAGCCACCGGAGAATGCTT+TGG | 0.488342 | 3_3:-65910168 | Msa0465500:CDS |
| AAGAAGGTGGTGAGCGCGAG+CGG | 0.493113 | 3_3:-65910082 | Msa0465500:CDS |
| ATGATCGTTATAAAGAATAC+AGG | 0.496029 | 3_3:-65909911 | Msa0465500:intron |
| CCGAGAGAGAGGAGCCGCAA+CGG | 0.496946 | 3_3:-65910130 | Msa0465500:CDS |
| CAACGGCAGGTGACGAAGGT+GGG | 0.503015 | 3_3:-65910113 | Msa0465500:CDS |
| GTCGGATTCGGTTGGAAAGA+CGG | 0.503784 | 3_3:-65910051 | Msa0465500:CDS |
| CCGTTGCGGCTCCTCTCTCT+CGG | 0.504506 | 3_3:+65910130 | None:intergenic |
| CGATCACCGGAAAACTCGCC+GGG | 0.510555 | 3_3:-65910281 | Msa0465500:CDS |
| GGTTGGAAAGACGGCGGAGG+AGG | 0.512519 | 3_3:-65910042 | Msa0465500:CDS |
| TTGACTGCGACTACTGCCAT+TGG | 0.516286 | 3_3:+65910236 | None:intergenic |
| AAACCACCACCTCACACAGC+CGG | 0.516586 | 3_3:+65909994 | None:intergenic |
| CTCCGGCCATGAAGAAATCA+TGG | 0.516869 | 3_3:-65910391 | Msa0465500:CDS |
| AGCGTTACAAGCATGTGATC+TGG | 0.525461 | 3_3:-65909400 | Msa0465500:CDS |
| GGCGGAGGAGGTGACGAGAA+AGG | 0.525850 | 3_3:-65910030 | Msa0465500:CDS |
| TGGTCACATGGAGTTGCGGC+GGG | 0.527583 | 3_3:+65909039 | None:intergenic |
| ACCACTGCCAAAGCATTCTC+CGG | 0.529515 | 3_3:+65910161 | None:intergenic |
| AAGGGAGAGCAGAAACGTGC+TGG | 0.543305 | 3_3:+65910335 | None:intergenic |
| TTGAATGCAATTTGGTCACA+TGG | 0.548465 | 3_3:+65909027 | None:intergenic |
| ACCGGAGAATGCTTTGGCAG+TGG | 0.548529 | 3_3:-65910162 | Msa0465500:CDS |
| TTCGGTTGGAAAGACGGCGG+AGG | 0.549037 | 3_3:-65910045 | Msa0465500:CDS |
| GATGATTGGCAGTCAAATTG+GGG | 0.550674 | 3_3:-65909166 | Msa0465500:CDS |
| TGACGAGAAAGGCGGCGTTA+GGG | 0.554304 | 3_3:-65910019 | Msa0465500:CDS |
| TCGATCACCGGAAAACTCGC+CGG | 0.557632 | 3_3:-65910282 | Msa0465500:CDS |
| AAGGTGGGGAACACAGAAGA+AGG | 0.557970 | 3_3:-65910098 | Msa0465500:CDS |
| GATTGAAAATTCAAATCCAA+TGG | 0.560098 | 3_3:-65910252 | Msa0465500:CDS |
| TTTCTGCTCTCCCTTACGAT+GGG | 0.565604 | 3_3:-65910327 | Msa0465500:CDS |
| AACGGCAGGTGACGAAGGTG+GGG | 0.566365 | 3_3:-65910112 | Msa0465500:CDS |
| TGGAGTTGCGGCGGGTACAA+AGG | 0.567804 | 3_3:+65909047 | None:intergenic |
| GCGGCTCCTCTCTCTCGGAT+CGG | 0.569444 | 3_3:+65910135 | None:intergenic |
| GGTCAACCGATCCGAGAGAG+AGG | 0.574020 | 3_3:-65910141 | Msa0465500:CDS |
| GTTTCTGCTCTCCCTTACGA+TGG | 0.578678 | 3_3:-65910328 | Msa0465500:CDS |
| ATGGGACCCAACAGACTCAC+CGG | 0.579685 | 3_3:-65910309 | Msa0465500:CDS |
| AGGGTTCCGGCTGTGTGAGG+TGG | 0.580499 | 3_3:-65910000 | Msa0465500:CDS |
| CTGCGAATAAGACGCAAGGT+TGG | 0.580679 | 3_3:-65909947 | Msa0465500:CDS |
| TTGGTCACATGGAGTTGCGG+CGG | 0.580848 | 3_3:+65909038 | None:intergenic |
| TTTCTCAGTGACTTGTTGAA+AGG | 0.583154 | 3_3:+65909377 | None:intergenic |
| ATCCACCCTTGTAGCTGCAG+AGG | 0.583351 | 3_3:+65909186 | None:intergenic |
| ACCTTCGTCACCTGCCGTTG+CGG | 0.587126 | 3_3:+65910116 | None:intergenic |
| GCAACGGCAGGTGACGAAGG+TGG | 0.588754 | 3_3:-65910114 | Msa0465500:CDS |
| TCGCAGTCAATGATAAGCTA+AGG | 0.589888 | 3_3:-65910223 | Msa0465500:CDS |
| AATTTGGTCACATGGAGTTG+CGG | 0.595365 | 3_3:+65909035 | None:intergenic |
| GCCGCAACGGCAGGTGACGA+AGG | 0.596577 | 3_3:-65910117 | Msa0465500:CDS |
| ATCCTCTGCAGCTACAAGGG+TGG | 0.598683 | 3_3:-65909188 | Msa0465500:CDS |
| ATCATCCTCTGCAGCTACAA+GGG | 0.601170 | 3_3:-65909191 | Msa0465500:CDS |
| AATAAGACGCAAGGTTGGAG+TGG | 0.606780 | 3_3:-65909942 | Msa0465500:CDS |
| TGATTCGAACTGAGTTGAGT+CGG | 0.607066 | 3_3:+65910358 | None:intergenic |
| GAAAGATGAGTTCACAGAGA+TGG | 0.611579 | 3_3:-65909143 | Msa0465500:CDS |
| ATGAAGAAATCATGGTCAAG+AGG | 0.612510 | 3_3:-65910383 | Msa0465500:CDS |
| GTGAGCGCGAGCGGAGAGTG+AGG | 0.614179 | 3_3:-65910073 | Msa0465500:CDS |
| GTTAGGGTTCCGGCTGTGTG+AGG | 0.619774 | 3_3:-65910003 | Msa0465500:CDS |
| ACCCAACCATGAAGAAATCG+AGG | 0.622973 | 3_3:-65910424 | Msa0465500:CDS |
| TCTGTTGGGTCCCATCGTAA+GGG | 0.629894 | 3_3:+65910317 | None:intergenic |
| GCGCGAGCGGAGAGTGAGGT+CGG | 0.631538 | 3_3:-65910069 | Msa0465500:CDS |
| AGAGTGAGGTCGGATTCGGT+TGG | 0.634318 | 3_3:-65910059 | Msa0465500:CDS |
| AACGGAGCAACAGAAGCCAC+CGG | 0.645256 | 3_3:-65910180 | Msa0465500:CDS |
| CTCACCGGAGTATCGATCAC+CGG | 0.649237 | 3_3:-65910294 | Msa0465500:CDS |
| CCCAACCATGAAGAAATCGA+GGG | 0.651097 | 3_3:-65910423 | Msa0465500:CDS |
| ATGGCTGCGAATAAGACGCA+AGG | 0.663414 | 3_3:-65909951 | Msa0465500:CDS |
| ACTGCCAAAGCATTCTCCGG+TGG | 0.663987 | 3_3:+65910164 | None:intergenic |
| TGACATTGCAACAGAAACAG+TGG | 0.680339 | 3_3:+65909120 | None:intergenic |
| GGAGGAGGTGACGAGAAAGG+CGG | 0.687695 | 3_3:-65910027 | Msa0465500:CDS |
| GTGGGGAACACAGAAGAAGG+TGG | 0.702784 | 3_3:-65910095 | Msa0465500:CDS |
| CCAACCATGAAGAAATCGAG+GGG | 0.723739 | 3_3:-65910422 | Msa0465500:CDS |
| ATGATTGGCAGTCAAATTGG+GGG | 0.727344 | 3_3:-65909165 | Msa0465500:CDS |
| GGATTCGGTTGGAAAGACGG+CGG | 0.748237 | 3_3:-65910048 | Msa0465500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTAAAAATCATCATA+TGG | - | chr3_3:65909966-65909985 | Msa0465500:CDS | 10.0% |
| !!! | ATTTTTAAAAATCATCATAT+GGG | - | chr3_3:65909967-65909986 | Msa0465500:CDS | 10.0% |
| !!! | TATTTTTAAAAATCATCATA+TGG | - | chr3_3:65909966-65909985 | Msa0465500:CDS | 10.0% |
| !!! | ATTTTTAAAAATCATCATAT+GGG | - | chr3_3:65909967-65909986 | Msa0465500:CDS | 10.0% |
| !!! | AGAATTTTTATTTTGTTTCT+TGG | - | chr3_3:65909642-65909661 | Msa0465500:intron | 15.0% |
| !!! | AGAATTTTTATTTTGTTTCT+TGG | - | chr3_3:65909642-65909661 | Msa0465500:intron | 15.0% |
| !! | TTTATTTGCTTGAATAATCT+TGG | - | chr3_3:65909902-65909921 | Msa0465500:intron | 20.0% |
| !! | AGGATAATATAACGATAATT+TGG | + | chr3_3:65910200-65910219 | None:intergenic | 20.0% |
| !! | TTTATTTGCTTGAATAATCT+TGG | - | chr3_3:65909902-65909921 | Msa0465500:intron | 20.0% |
| !! | AGGATAATATAACGATAATT+TGG | + | chr3_3:65910200-65910219 | None:intergenic | 20.0% |
| !!! | GAATTTTCAATCATTTTTCC+CGG | + | chr3_3:65909219-65909238 | None:intergenic | 25.0% |
| ! | GATTGAAAATTCAAATCCAA+TGG | - | chr3_3:65909227-65909246 | Msa0465500:intron | 25.0% |
| ! | ATGATCGTTATAAAGAATAC+AGG | - | chr3_3:65909568-65909587 | Msa0465500:intron | 25.0% |
| ! | CCATAGAAATCAATTAATTC+AGG | + | chr3_3:65909611-65909630 | None:intergenic | 25.0% |
| !! | CCTGAATTAATTGATTTCTA+TGG | - | chr3_3:65909608-65909627 | Msa0465500:intron | 25.0% |
| ! | TGAACAAAATGTGATTGTTA+GGG | + | chr3_3:65909865-65909884 | None:intergenic | 25.0% |
| ! | ATGAACAAAATGTGATTGTT+AGG | + | chr3_3:65909866-65909885 | None:intergenic | 25.0% |
| ! | TGTTTATCTGTGAATGTTAT+CGG | - | chr3_3:65910044-65910063 | Msa0465500:CDS | 25.0% |
| !! | AACATGTTAGTACAATTTTG+AGG | + | chr3_3:65910220-65910239 | None:intergenic | 25.0% |
| !!! | GAATTTTCAATCATTTTTCC+CGG | + | chr3_3:65909219-65909238 | None:intergenic | 25.0% |
| ! | GATTGAAAATTCAAATCCAA+TGG | - | chr3_3:65909227-65909246 | Msa0465500:intron | 25.0% |
| ! | ATGATCGTTATAAAGAATAC+AGG | - | chr3_3:65909568-65909587 | Msa0465500:intron | 25.0% |
| ! | CCATAGAAATCAATTAATTC+AGG | + | chr3_3:65909611-65909630 | None:intergenic | 25.0% |
| !! | CCTGAATTAATTGATTTCTA+TGG | - | chr3_3:65909608-65909627 | Msa0465500:intron | 25.0% |
| ! | TGAACAAAATGTGATTGTTA+GGG | + | chr3_3:65909865-65909884 | None:intergenic | 25.0% |
| ! | ATGAACAAAATGTGATTGTT+AGG | + | chr3_3:65909866-65909885 | None:intergenic | 25.0% |
| ! | TGTTTATCTGTGAATGTTAT+CGG | - | chr3_3:65910044-65910063 | Msa0465500:CDS | 25.0% |
| !! | AACATGTTAGTACAATTTTG+AGG | + | chr3_3:65910220-65910239 | None:intergenic | 25.0% |
| GTTAACTCCTGGAAAATTAA+CGG | - | chr3_3:65909281-65909300 | Msa0465500:intron | 30.0% | |
| !! | GGTTTGTTTGATTTCGTTTT+CGG | - | chr3_3:65909503-65909522 | Msa0465500:intron | 30.0% |
| !! | TTTGATTTCGTTTTCGGTTA+TGG | - | chr3_3:65909509-65909528 | Msa0465500:intron | 30.0% |
| !! | TTCTTGGTGATTTTCTAGAT+AGG | - | chr3_3:65909658-65909677 | Msa0465500:intron | 30.0% |
| !! | TCTTGGTGATTTTCTAGATA+GGG | - | chr3_3:65909659-65909678 | Msa0465500:intron | 30.0% |
| GAACAAAATGTGATTGTTAG+GGG | + | chr3_3:65909864-65909883 | None:intergenic | 30.0% | |
| ! | TCACATTTTGTTCATTTGCA+AGG | - | chr3_3:65909871-65909890 | Msa0465500:intron | 30.0% |
| CATTACCTTACAAATGTTGA+TGG | - | chr3_3:65909996-65910015 | Msa0465500:CDS | 30.0% | |
| CTTTACCATCAACATTTGTA+AGG | + | chr3_3:65910004-65910023 | None:intergenic | 30.0% | |
| !! | CTTACAAATGTTGATGGTAA+AGG | - | chr3_3:65910002-65910021 | Msa0465500:CDS | 30.0% |
| CTATCACTTTCAGTTCTTTA+TGG | - | chr3_3:65910148-65910167 | Msa0465500:CDS | 30.0% | |
| GTTAACTCCTGGAAAATTAA+CGG | - | chr3_3:65909281-65909300 | Msa0465500:intron | 30.0% | |
| !! | GGTTTGTTTGATTTCGTTTT+CGG | - | chr3_3:65909503-65909522 | Msa0465500:intron | 30.0% |
| !! | TTTGATTTCGTTTTCGGTTA+TGG | - | chr3_3:65909509-65909528 | Msa0465500:intron | 30.0% |
| !! | TTCTTGGTGATTTTCTAGAT+AGG | - | chr3_3:65909658-65909677 | Msa0465500:intron | 30.0% |
| !! | TCTTGGTGATTTTCTAGATA+GGG | - | chr3_3:65909659-65909678 | Msa0465500:intron | 30.0% |
| GAACAAAATGTGATTGTTAG+GGG | + | chr3_3:65909864-65909883 | None:intergenic | 30.0% | |
| ! | TCACATTTTGTTCATTTGCA+AGG | - | chr3_3:65909871-65909890 | Msa0465500:intron | 30.0% |
| CATTACCTTACAAATGTTGA+TGG | - | chr3_3:65909996-65910015 | Msa0465500:CDS | 30.0% | |
| CTTTACCATCAACATTTGTA+AGG | + | chr3_3:65910004-65910023 | None:intergenic | 30.0% | |
| !! | CTTACAAATGTTGATGGTAA+AGG | - | chr3_3:65910002-65910021 | Msa0465500:CDS | 30.0% |
| CTATCACTTTCAGTTCTTTA+TGG | - | chr3_3:65910148-65910167 | Msa0465500:CDS | 30.0% | |
| TCTTGACCATGATTTCTTCA+TGG | + | chr3_3:65909097-65909116 | None:intergenic | 35.0% | |
| ATGAAGAAATCATGGTCAAG+AGG | - | chr3_3:65909096-65909115 | Msa0465500:CDS | 35.0% | |
| ! | CACTAAAGGTACATTCAACA+AGG | + | chr3_3:65909835-65909854 | None:intergenic | 35.0% |
| CTTGTTGAATGTACCTTTAG+TGG | - | chr3_3:65909833-65909852 | Msa0465500:intron | 35.0% | |
| GATGGTAAAGGTTAGTGATA+TGG | - | chr3_3:65910014-65910033 | Msa0465500:CDS | 35.0% | |
| !! | TTTCTCAGTGACTTGTTGAA+AGG | + | chr3_3:65910105-65910124 | None:intergenic | 35.0% |
| CTTTCAGTTCTTTATGGATC+AGG | - | chr3_3:65910154-65910173 | Msa0465500:CDS | 35.0% | |
| TTGTGTGCAAATTGATGAGT+AGG | - | chr3_3:65910240-65910259 | Msa0465500:CDS | 35.0% | |
| TAGCAAAAGCAGCAAAAGAT+AGG | + | chr3_3:65910387-65910406 | None:intergenic | 35.0% | |
| TCTTGACCATGATTTCTTCA+TGG | + | chr3_3:65909097-65909116 | None:intergenic | 35.0% | |
| ATGAAGAAATCATGGTCAAG+AGG | - | chr3_3:65909096-65909115 | Msa0465500:CDS | 35.0% | |
| ! | CACTAAAGGTACATTCAACA+AGG | + | chr3_3:65909835-65909854 | None:intergenic | 35.0% |
| CTTGTTGAATGTACCTTTAG+TGG | - | chr3_3:65909833-65909852 | Msa0465500:intron | 35.0% | |
| GATGGTAAAGGTTAGTGATA+TGG | - | chr3_3:65910014-65910033 | Msa0465500:CDS | 35.0% | |
| !! | TTTCTCAGTGACTTGTTGAA+AGG | + | chr3_3:65910105-65910124 | None:intergenic | 35.0% |
| CTTTCAGTTCTTTATGGATC+AGG | - | chr3_3:65910154-65910173 | Msa0465500:CDS | 35.0% | |
| TTGTGTGCAAATTGATGAGT+AGG | - | chr3_3:65910240-65910259 | Msa0465500:CDS | 35.0% | |
| TAGCAAAAGCAGCAAAAGAT+AGG | + | chr3_3:65910387-65910406 | None:intergenic | 35.0% | |
| ! | TGATTCGAACTGAGTTGAGT+CGG | + | chr3_3:65909124-65909143 | None:intergenic | 40.0% |
| TCGCAGTCAATGATAAGCTA+AGG | - | chr3_3:65909256-65909275 | Msa0465500:intron | 40.0% | |
| ! | TGTTGCTCCGTTAATTTTCC+AGG | + | chr3_3:65909291-65909310 | None:intergenic | 40.0% |
| GTAAAGGTTAGTGATATGGC+AGG | - | chr3_3:65910018-65910037 | Msa0465500:CDS | 40.0% | |
| ! | AGAACTGAAAGTGATAGCGA+AGG | + | chr3_3:65910145-65910164 | None:intergenic | 40.0% |
| GCAAATTGATGAGTAGGTTG+TGG | - | chr3_3:65910246-65910265 | Msa0465500:CDS | 40.0% | |
| TGGATGATTGGCAGTCAAAT+TGG | - | chr3_3:65910311-65910330 | Msa0465500:CDS | 40.0% | |
| GGATGATTGGCAGTCAAATT+GGG | - | chr3_3:65910312-65910331 | Msa0465500:CDS | 40.0% | |
| GATGATTGGCAGTCAAATTG+GGG | - | chr3_3:65910313-65910332 | Msa0465500:CDS | 40.0% | |
| ATGATTGGCAGTCAAATTGG+GGG | - | chr3_3:65910314-65910333 | Msa0465500:CDS | 40.0% | |
| GAAAGATGAGTTCACAGAGA+TGG | - | chr3_3:65910336-65910355 | Msa0465500:CDS | 40.0% | |
| TGACATTGCAACAGAAACAG+TGG | + | chr3_3:65910362-65910381 | None:intergenic | 40.0% | |
| ! | TGATTCGAACTGAGTTGAGT+CGG | + | chr3_3:65909124-65909143 | None:intergenic | 40.0% |
| TCGCAGTCAATGATAAGCTA+AGG | - | chr3_3:65909256-65909275 | Msa0465500:intron | 40.0% | |
| ! | TGTTGCTCCGTTAATTTTCC+AGG | + | chr3_3:65909291-65909310 | None:intergenic | 40.0% |
| GTAAAGGTTAGTGATATGGC+AGG | - | chr3_3:65910018-65910037 | Msa0465500:CDS | 40.0% | |
| ! | AGAACTGAAAGTGATAGCGA+AGG | + | chr3_3:65910145-65910164 | None:intergenic | 40.0% |
| GCAAATTGATGAGTAGGTTG+TGG | - | chr3_3:65910246-65910265 | Msa0465500:CDS | 40.0% | |
| TGGATGATTGGCAGTCAAAT+TGG | - | chr3_3:65910311-65910330 | Msa0465500:CDS | 40.0% | |
| GGATGATTGGCAGTCAAATT+GGG | - | chr3_3:65910312-65910331 | Msa0465500:CDS | 40.0% | |
| GATGATTGGCAGTCAAATTG+GGG | - | chr3_3:65910313-65910332 | Msa0465500:CDS | 40.0% | |
| ATGATTGGCAGTCAAATTGG+GGG | - | chr3_3:65910314-65910333 | Msa0465500:CDS | 40.0% | |
| GAAAGATGAGTTCACAGAGA+TGG | - | chr3_3:65910336-65910355 | Msa0465500:CDS | 40.0% | |
| TGACATTGCAACAGAAACAG+TGG | + | chr3_3:65910362-65910381 | None:intergenic | 40.0% | |
| ACCCAACCATGAAGAAATCG+AGG | - | chr3_3:65909055-65909074 | Msa0465500:CDS | 45.0% | |
| CCCTCGATTTCTTCATGGTT+GGG | + | chr3_3:65909059-65909078 | None:intergenic | 45.0% | |
| CCCAACCATGAAGAAATCGA+GGG | - | chr3_3:65909056-65909075 | Msa0465500:CDS | 45.0% | |
| CCAACCATGAAGAAATCGAG+GGG | - | chr3_3:65909057-65909076 | Msa0465500:CDS | 45.0% | |
| TTTCTTCATGGCCGGAGAAT+CGG | + | chr3_3:65909085-65909104 | None:intergenic | 45.0% | |
| GACCATGATTTCTTCATGGC+CGG | + | chr3_3:65909093-65909112 | None:intergenic | 45.0% | |
| TTTCTGCTCTCCCTTACGAT+GGG | - | chr3_3:65909152-65909171 | Msa0465500:CDS | 45.0% | |
| ! | TTTTCCGGTGATCGATACTC+CGG | + | chr3_3:65909192-65909211 | None:intergenic | 45.0% |
| ! | ATTTTTCCCGGCGAGTTTTC+CGG | + | chr3_3:65909207-65909226 | None:intergenic | 45.0% |
| AAGCTAAGGCAGTTAACTCC+TGG | - | chr3_3:65909270-65909289 | Msa0465500:intron | 45.0% | |
| AATAAGACGCAAGGTTGGAG+TGG | - | chr3_3:65909537-65909556 | Msa0465500:intron | 45.0% | |
| GTTAGGGGAAACTCCACTAA+AGG | + | chr3_3:65909849-65909868 | None:intergenic | 45.0% | |
| AGCGTTACAAGCATGTGATC+TGG | - | chr3_3:65910079-65910098 | Msa0465500:CDS | 45.0% | |
| ! | ACTGAAAGTGATAGCGAAGG+TGG | + | chr3_3:65910142-65910161 | None:intergenic | 45.0% |
| ATCATCCTCTGCAGCTACAA+GGG | - | chr3_3:65910288-65910307 | Msa0465500:CDS | 45.0% | |
| ACCCAACCATGAAGAAATCG+AGG | - | chr3_3:65909055-65909074 | Msa0465500:CDS | 45.0% | |
| CCCTCGATTTCTTCATGGTT+GGG | + | chr3_3:65909059-65909078 | None:intergenic | 45.0% | |
| CCCAACCATGAAGAAATCGA+GGG | - | chr3_3:65909056-65909075 | Msa0465500:CDS | 45.0% | |
| CCAACCATGAAGAAATCGAG+GGG | - | chr3_3:65909057-65909076 | Msa0465500:CDS | 45.0% | |
| TTTCTTCATGGCCGGAGAAT+CGG | + | chr3_3:65909085-65909104 | None:intergenic | 45.0% | |
| GACCATGATTTCTTCATGGC+CGG | + | chr3_3:65909093-65909112 | None:intergenic | 45.0% | |
| TTTCTGCTCTCCCTTACGAT+GGG | - | chr3_3:65909152-65909171 | Msa0465500:CDS | 45.0% | |
| ! | TTTTCCGGTGATCGATACTC+CGG | + | chr3_3:65909192-65909211 | None:intergenic | 45.0% |
| ! | ATTTTTCCCGGCGAGTTTTC+CGG | + | chr3_3:65909207-65909226 | None:intergenic | 45.0% |
| AAGCTAAGGCAGTTAACTCC+TGG | - | chr3_3:65909270-65909289 | Msa0465500:intron | 45.0% | |
| AATAAGACGCAAGGTTGGAG+TGG | - | chr3_3:65909537-65909556 | Msa0465500:intron | 45.0% | |
| GTTAGGGGAAACTCCACTAA+AGG | + | chr3_3:65909849-65909868 | None:intergenic | 45.0% | |
| AGCGTTACAAGCATGTGATC+TGG | - | chr3_3:65910079-65910098 | Msa0465500:CDS | 45.0% | |
| ! | ACTGAAAGTGATAGCGAAGG+TGG | + | chr3_3:65910142-65910161 | None:intergenic | 45.0% |
| ATCATCCTCTGCAGCTACAA+GGG | - | chr3_3:65910288-65910307 | Msa0465500:CDS | 45.0% | |
| CCCCTCGATTTCTTCATGGT+TGG | + | chr3_3:65909060-65909079 | None:intergenic | 50.0% | |
| CTCCGGCCATGAAGAAATCA+TGG | - | chr3_3:65909088-65909107 | Msa0465500:CDS | 50.0% | |
| GTTTCTGCTCTCCCTTACGA+TGG | - | chr3_3:65909151-65909170 | Msa0465500:CDS | 50.0% | |
| TCTGTTGGGTCCCATCGTAA+GGG | + | chr3_3:65909165-65909184 | None:intergenic | 50.0% | |
| GATACTCCGGTGAGTCTGTT+GGG | + | chr3_3:65909179-65909198 | None:intergenic | 50.0% | |
| TTGACTGCGACTACTGCCAT+TGG | + | chr3_3:65909246-65909265 | None:intergenic | 50.0% | |
| ! | ACCACTGCCAAAGCATTCTC+CGG | + | chr3_3:65909321-65909340 | None:intergenic | 50.0% |
| AAGGTGGGGAACACAGAAGA+AGG | - | chr3_3:65909381-65909400 | Msa0465500:intron | 50.0% | |
| ! | GTCGGATTCGGTTGGAAAGA+CGG | - | chr3_3:65909428-65909447 | Msa0465500:CDS | 50.0% |
| ATGGCTGCGAATAAGACGCA+AGG | - | chr3_3:65909528-65909547 | Msa0465500:intron | 50.0% | |
| CTGCGAATAAGACGCAAGGT+TGG | - | chr3_3:65909532-65909551 | Msa0465500:intron | 50.0% | |
| CATCATCCTCTGCAGCTACA+AGG | - | chr3_3:65910287-65910306 | Msa0465500:CDS | 50.0% | |
| CAGCTACAAGGGTGGATGAT+TGG | - | chr3_3:65910299-65910318 | Msa0465500:CDS | 50.0% | |
| GCTATGAGCTCACTCATCTC+TGG | - | chr3_3:65910403-65910422 | Msa0465500:CDS | 50.0% | |
| CCCCTCGATTTCTTCATGGT+TGG | + | chr3_3:65909060-65909079 | None:intergenic | 50.0% | |
| CTCCGGCCATGAAGAAATCA+TGG | - | chr3_3:65909088-65909107 | Msa0465500:CDS | 50.0% | |
| GTTTCTGCTCTCCCTTACGA+TGG | - | chr3_3:65909151-65909170 | Msa0465500:CDS | 50.0% | |
| TCTGTTGGGTCCCATCGTAA+GGG | + | chr3_3:65909165-65909184 | None:intergenic | 50.0% | |
| GATACTCCGGTGAGTCTGTT+GGG | + | chr3_3:65909179-65909198 | None:intergenic | 50.0% | |
| TTGACTGCGACTACTGCCAT+TGG | + | chr3_3:65909246-65909265 | None:intergenic | 50.0% | |
| ! | ACCACTGCCAAAGCATTCTC+CGG | + | chr3_3:65909321-65909340 | None:intergenic | 50.0% |
| AAGGTGGGGAACACAGAAGA+AGG | - | chr3_3:65909381-65909400 | Msa0465500:intron | 50.0% | |
| ! | GTCGGATTCGGTTGGAAAGA+CGG | - | chr3_3:65909428-65909447 | Msa0465500:CDS | 50.0% |
| ATGGCTGCGAATAAGACGCA+AGG | - | chr3_3:65909528-65909547 | Msa0465500:intron | 50.0% | |
| CTGCGAATAAGACGCAAGGT+TGG | - | chr3_3:65909532-65909551 | Msa0465500:intron | 50.0% | |
| CATCATCCTCTGCAGCTACA+AGG | - | chr3_3:65910287-65910306 | Msa0465500:CDS | 50.0% | |
| CAGCTACAAGGGTGGATGAT+TGG | - | chr3_3:65910299-65910318 | Msa0465500:CDS | 50.0% | |
| GCTATGAGCTCACTCATCTC+TGG | - | chr3_3:65910403-65910422 | Msa0465500:CDS | 50.0% | |
| GGAGCCCCTCGATTTCTTCA+TGG | + | chr3_3:65909064-65909083 | None:intergenic | 55.0% | |
| AAGGGAGAGCAGAAACGTGC+TGG | + | chr3_3:65909147-65909166 | None:intergenic | 55.0% | |
| GTCTGTTGGGTCCCATCGTA+AGG | + | chr3_3:65909166-65909185 | None:intergenic | 55.0% | |
| ATGGGACCCAACAGACTCAC+CGG | - | chr3_3:65909170-65909189 | Msa0465500:CDS | 55.0% | |
| CGATACTCCGGTGAGTCTGT+TGG | + | chr3_3:65909180-65909199 | None:intergenic | 55.0% | |
| !! | CTCACCGGAGTATCGATCAC+CGG | - | chr3_3:65909185-65909204 | Msa0465500:CDS | 55.0% |
| TCGATCACCGGAAAACTCGC+CGG | - | chr3_3:65909197-65909216 | Msa0465500:CDS | 55.0% | |
| AACGGAGCAACAGAAGCCAC+CGG | - | chr3_3:65909299-65909318 | Msa0465500:intron | 55.0% | |
| GAAGCCACCGGAGAATGCTT+TGG | - | chr3_3:65909311-65909330 | Msa0465500:intron | 55.0% | |
| ! | ACTGCCAAAGCATTCTCCGG+TGG | + | chr3_3:65909318-65909337 | None:intergenic | 55.0% |
| ACCGGAGAATGCTTTGGCAG+TGG | - | chr3_3:65909317-65909336 | Msa0465500:intron | 55.0% | |
| GTGGGGAACACAGAAGAAGG+TGG | - | chr3_3:65909384-65909403 | Msa0465500:intron | 55.0% | |
| ! | AGAGTGAGGTCGGATTCGGT+TGG | - | chr3_3:65909420-65909439 | Msa0465500:CDS | 55.0% |
| ! | GGATTCGGTTGGAAAGACGG+CGG | - | chr3_3:65909431-65909450 | Msa0465500:CDS | 55.0% |
| TGACGAGAAAGGCGGCGTTA+GGG | - | chr3_3:65909460-65909479 | Msa0465500:intron | 55.0% | |
| AAACCACCACCTCACACAGC+CGG | + | chr3_3:65909488-65909507 | None:intergenic | 55.0% | |
| ATCCTCTGCAGCTACAAGGG+TGG | - | chr3_3:65910291-65910310 | Msa0465500:CDS | 55.0% | |
| ATCCACCCTTGTAGCTGCAG+AGG | + | chr3_3:65910296-65910315 | None:intergenic | 55.0% | |
| GGAGCCCCTCGATTTCTTCA+TGG | + | chr3_3:65909064-65909083 | None:intergenic | 55.0% | |
| AAGGGAGAGCAGAAACGTGC+TGG | + | chr3_3:65909147-65909166 | None:intergenic | 55.0% | |
| GTCTGTTGGGTCCCATCGTA+AGG | + | chr3_3:65909166-65909185 | None:intergenic | 55.0% | |
| ATGGGACCCAACAGACTCAC+CGG | - | chr3_3:65909170-65909189 | Msa0465500:CDS | 55.0% | |
| CGATACTCCGGTGAGTCTGT+TGG | + | chr3_3:65909180-65909199 | None:intergenic | 55.0% | |
| !! | CTCACCGGAGTATCGATCAC+CGG | - | chr3_3:65909185-65909204 | Msa0465500:CDS | 55.0% |
| TCGATCACCGGAAAACTCGC+CGG | - | chr3_3:65909197-65909216 | Msa0465500:CDS | 55.0% | |
| AACGGAGCAACAGAAGCCAC+CGG | - | chr3_3:65909299-65909318 | Msa0465500:intron | 55.0% | |
| GAAGCCACCGGAGAATGCTT+TGG | - | chr3_3:65909311-65909330 | Msa0465500:intron | 55.0% | |
| ! | ACTGCCAAAGCATTCTCCGG+TGG | + | chr3_3:65909318-65909337 | None:intergenic | 55.0% |
| ACCGGAGAATGCTTTGGCAG+TGG | - | chr3_3:65909317-65909336 | Msa0465500:intron | 55.0% | |
| GTGGGGAACACAGAAGAAGG+TGG | - | chr3_3:65909384-65909403 | Msa0465500:intron | 55.0% | |
| ! | AGAGTGAGGTCGGATTCGGT+TGG | - | chr3_3:65909420-65909439 | Msa0465500:CDS | 55.0% |
| ! | GGATTCGGTTGGAAAGACGG+CGG | - | chr3_3:65909431-65909450 | Msa0465500:CDS | 55.0% |
| TGACGAGAAAGGCGGCGTTA+GGG | - | chr3_3:65909460-65909479 | Msa0465500:intron | 55.0% | |
| AAACCACCACCTCACACAGC+CGG | + | chr3_3:65909488-65909507 | None:intergenic | 55.0% | |
| ATCCTCTGCAGCTACAAGGG+TGG | - | chr3_3:65910291-65910310 | Msa0465500:CDS | 55.0% | |
| ATCCACCCTTGTAGCTGCAG+AGG | + | chr3_3:65910296-65910315 | None:intergenic | 55.0% | |
| ATCGAGGGGCTCCGATTCTC+CGG | - | chr3_3:65909071-65909090 | Msa0465500:CDS | 60.0% | |
| CGATCACCGGAAAACTCGCC+GGG | - | chr3_3:65909198-65909217 | Msa0465500:CDS | 60.0% | |
| GGTCAACCGATCCGAGAGAG+AGG | - | chr3_3:65909338-65909357 | Msa0465500:intron | 60.0% | |
| ACCTTCGTCACCTGCCGTTG+CGG | + | chr3_3:65909366-65909385 | None:intergenic | 60.0% | |
| CAACGGCAGGTGACGAAGGT+GGG | - | chr3_3:65909366-65909385 | Msa0465500:intron | 60.0% | |
| AACGGCAGGTGACGAAGGTG+GGG | - | chr3_3:65909367-65909386 | Msa0465500:intron | 60.0% | |
| AAGAAGGTGGTGAGCGCGAG+CGG | - | chr3_3:65909397-65909416 | Msa0465500:CDS | 60.0% | |
| GCGGAGAGTGAGGTCGGATT+CGG | - | chr3_3:65909416-65909435 | Msa0465500:CDS | 60.0% | |
| TTCGGTTGGAAAGACGGCGG+AGG | - | chr3_3:65909434-65909453 | Msa0465500:CDS | 60.0% | |
| GGAGGAGGTGACGAGAAAGG+CGG | - | chr3_3:65909452-65909471 | Msa0465500:intron | 60.0% | |
| GTGACGAGAAAGGCGGCGTT+AGG | - | chr3_3:65909459-65909478 | Msa0465500:intron | 60.0% | |
| GAAAGGCGGCGTTAGGGTTC+CGG | - | chr3_3:65909466-65909485 | Msa0465500:intron | 60.0% | |
| GTTAGGGTTCCGGCTGTGTG+AGG | - | chr3_3:65909476-65909495 | Msa0465500:intron | 60.0% | |
| TGGAGTTGCGGCGGGTACAA+AGG | + | chr3_3:65910435-65910454 | None:intergenic | 60.0% | |
| ATCGAGGGGCTCCGATTCTC+CGG | - | chr3_3:65909071-65909090 | Msa0465500:CDS | 60.0% | |
| CGATCACCGGAAAACTCGCC+GGG | - | chr3_3:65909198-65909217 | Msa0465500:CDS | 60.0% | |
| GGTCAACCGATCCGAGAGAG+AGG | - | chr3_3:65909338-65909357 | Msa0465500:intron | 60.0% | |
| ACCTTCGTCACCTGCCGTTG+CGG | + | chr3_3:65909366-65909385 | None:intergenic | 60.0% | |
| CAACGGCAGGTGACGAAGGT+GGG | - | chr3_3:65909366-65909385 | Msa0465500:intron | 60.0% | |
| AACGGCAGGTGACGAAGGTG+GGG | - | chr3_3:65909367-65909386 | Msa0465500:intron | 60.0% | |
| AAGAAGGTGGTGAGCGCGAG+CGG | - | chr3_3:65909397-65909416 | Msa0465500:CDS | 60.0% | |
| GCGGAGAGTGAGGTCGGATT+CGG | - | chr3_3:65909416-65909435 | Msa0465500:CDS | 60.0% | |
| TTCGGTTGGAAAGACGGCGG+AGG | - | chr3_3:65909434-65909453 | Msa0465500:CDS | 60.0% | |
| GGAGGAGGTGACGAGAAAGG+CGG | - | chr3_3:65909452-65909471 | Msa0465500:intron | 60.0% | |
| GTGACGAGAAAGGCGGCGTT+AGG | - | chr3_3:65909459-65909478 | Msa0465500:intron | 60.0% | |
| GAAAGGCGGCGTTAGGGTTC+CGG | - | chr3_3:65909466-65909485 | Msa0465500:intron | 60.0% | |
| GTTAGGGTTCCGGCTGTGTG+AGG | - | chr3_3:65909476-65909495 | Msa0465500:intron | 60.0% | |
| TGGAGTTGCGGCGGGTACAA+AGG | + | chr3_3:65910435-65910454 | None:intergenic | 60.0% | |
| GCGGCTCCTCTCTCTCGGAT+CGG | + | chr3_3:65909347-65909366 | None:intergenic | 65.0% | |
| CCGTTGCGGCTCCTCTCTCT+CGG | + | chr3_3:65909352-65909371 | None:intergenic | 65.0% | |
| CCGAGAGAGAGGAGCCGCAA+CGG | - | chr3_3:65909349-65909368 | Msa0465500:intron | 65.0% | |
| GCAACGGCAGGTGACGAAGG+TGG | - | chr3_3:65909365-65909384 | Msa0465500:intron | 65.0% | |
| GGTTGGAAAGACGGCGGAGG+AGG | - | chr3_3:65909437-65909456 | Msa0465500:CDS | 65.0% | |
| GGCGGAGGAGGTGACGAGAA+AGG | - | chr3_3:65909449-65909468 | Msa0465500:intron | 65.0% | |
| AGGGTTCCGGCTGTGTGAGG+TGG | - | chr3_3:65909479-65909498 | Msa0465500:intron | 65.0% | |
| GTTCCGGCTGTGTGAGGTGG+TGG | - | chr3_3:65909482-65909501 | Msa0465500:intron | 65.0% | |
| GCGGCTCCTCTCTCTCGGAT+CGG | + | chr3_3:65909347-65909366 | None:intergenic | 65.0% | |
| CCGTTGCGGCTCCTCTCTCT+CGG | + | chr3_3:65909352-65909371 | None:intergenic | 65.0% | |
| CCGAGAGAGAGGAGCCGCAA+CGG | - | chr3_3:65909349-65909368 | Msa0465500:intron | 65.0% | |
| GCAACGGCAGGTGACGAAGG+TGG | - | chr3_3:65909365-65909384 | Msa0465500:intron | 65.0% | |
| GGTTGGAAAGACGGCGGAGG+AGG | - | chr3_3:65909437-65909456 | Msa0465500:CDS | 65.0% | |
| GGCGGAGGAGGTGACGAGAA+AGG | - | chr3_3:65909449-65909468 | Msa0465500:intron | 65.0% | |
| AGGGTTCCGGCTGTGTGAGG+TGG | - | chr3_3:65909479-65909498 | Msa0465500:intron | 65.0% | |
| GTTCCGGCTGTGTGAGGTGG+TGG | - | chr3_3:65909482-65909501 | Msa0465500:intron | 65.0% | |
| GAGAGAGGAGCCGCAACGGC+AGG | - | chr3_3:65909353-65909372 | Msa0465500:intron | 70.0% | |
| GCCGCAACGGCAGGTGACGA+AGG | - | chr3_3:65909362-65909381 | Msa0465500:intron | 70.0% | |
| GTGAGCGCGAGCGGAGAGTG+AGG | - | chr3_3:65909406-65909425 | Msa0465500:CDS | 70.0% | |
| GCGCGAGCGGAGAGTGAGGT+CGG | - | chr3_3:65909410-65909429 | Msa0465500:CDS | 70.0% | |
| GAGAGAGGAGCCGCAACGGC+AGG | - | chr3_3:65909353-65909372 | Msa0465500:intron | 70.0% | |
| GCCGCAACGGCAGGTGACGA+AGG | - | chr3_3:65909362-65909381 | Msa0465500:intron | 70.0% | |
| GTGAGCGCGAGCGGAGAGTG+AGG | - | chr3_3:65909406-65909425 | Msa0465500:CDS | 70.0% | |
| GCGCGAGCGGAGAGTGAGGT+CGG | - | chr3_3:65909410-65909429 | Msa0465500:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 65909042 | 65910459 | 65909042 | ID=Msa0465500;Name=Msa0465500 |
| chr3_3 | mRNA | 65909042 | 65910459 | 65909042 | ID=Msa0465500-mRNA-1;Parent=Msa0465500;Name=Msa0465500-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|3|0|272 |
| chr3_3 | exon | 65909912 | 65910459 | 65909912 | ID=Msa0465500-mRNA-1:exon:14796;Parent=Msa0465500-mRNA-1 |
| chr3_3 | exon | 65909389 | 65909461 | 65909389 | ID=Msa0465500-mRNA-1:exon:14795;Parent=Msa0465500-mRNA-1 |
| chr3_3 | exon | 65909042 | 65909239 | 65909042 | ID=Msa0465500-mRNA-1:exon:14794;Parent=Msa0465500-mRNA-1 |
| chr3_3 | CDS | 65909912 | 65910459 | 65909912 | ID=Msa0465500-mRNA-1:cds;Parent=Msa0465500-mRNA-1 |
| chr3_3 | CDS | 65909389 | 65909461 | 65909389 | ID=Msa0465500-mRNA-1:cds;Parent=Msa0465500-mRNA-1 |
| chr3_3 | CDS | 65909042 | 65909239 | 65909042 | ID=Msa0465500-mRNA-1:cds;Parent=Msa0465500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
