Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479760 | XP_013462277.1 | 99.797 | 492 | 1 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1028 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479760 | sp|P25890|CATA_PEA | 92.105 | 494 | 37 | 1 | 1 | 492 | 1 | 494 | 0.0 | 968 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479760 | A0A072V3A8 | 99.797 | 492 | 1 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1028 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0479760 | 0.835803 | 1.356219e-56 | -8.615850e-47 |
| Msa0007810 | Msa0479760 | 0.808065 | 3.719078e-50 | -8.615850e-47 |
| Msa0017300 | Msa0479760 | 0.802129 | 6.494335e-49 | -8.615850e-47 |
| Msa0029520 | Msa0479760 | 0.812307 | 4.528421e-51 | -8.615850e-47 |
| Msa0033840 | Msa0479760 | 0.803207 | 3.891317e-49 | -8.615850e-47 |
| Msa0037650 | Msa0479760 | 0.801285 | 9.675718e-49 | -8.615850e-47 |
| Msa0046110 | Msa0479760 | 0.820914 | 5.331920e-53 | -8.615850e-47 |
| Msa0056230 | Msa0479760 | 0.800136 | 1.660705e-48 | -8.615850e-47 |
| Msa0065670 | Msa0479760 | 0.808733 | 2.679455e-50 | -8.615850e-47 |
| Msa0066890 | Msa0479760 | 0.827448 | 1.555742e-54 | -8.615850e-47 |
| Msa0067590 | Msa0479760 | 0.842353 | 2.724343e-58 | -8.615850e-47 |
| Msa0075990 | Msa0479760 | 0.800783 | 1.225749e-48 | -8.615850e-47 |
| Msa0081610 | Msa0479760 | 0.850722 | 1.413327e-60 | -8.615850e-47 |
| Msa0093950 | Msa0479760 | 0.819168 | 1.337807e-52 | -8.615850e-47 |
| Msa0094170 | Msa0479760 | 0.839274 | 1.747308e-57 | -8.615850e-47 |
| Msa0095810 | Msa0479760 | 0.838413 | 2.918829e-57 | -8.615850e-47 |
| Msa0111110 | Msa0479760 | 0.821641 | 3.624775e-53 | -8.615850e-47 |
| Msa0113370 | Msa0479760 | 0.806367 | 8.515326e-50 | -8.615850e-47 |
| Msa0120880 | Msa0479760 | -0.834393 | 3.076195e-56 | -8.615850e-47 |
| Msa0138990 | Msa0479760 | 0.873593 | 1.303541e-67 | -8.615850e-47 |
| Msa0140770 | Msa0479760 | 0.998166 | 9.091095e-258 | -8.615850e-47 |
| Msa0151510 | Msa0479760 | 0.804434 | 2.164267e-49 | -8.615850e-47 |
| Msa0154880 | Msa0479760 | 0.815925 | 7.199499e-52 | -8.615850e-47 |
| Msa0154890 | Msa0479760 | 0.836533 | 8.853070e-57 | -8.615850e-47 |
| Msa0156760 | Msa0479760 | -0.832560 | 8.814564e-56 | -8.615850e-47 |
| Msa0168770 | Msa0479760 | 0.813823 | 2.105610e-51 | -8.615850e-47 |
| Msa0173950 | Msa0479760 | 0.841317 | 5.112580e-58 | -8.615850e-47 |
| Msa0187590 | Msa0479760 | 0.837157 | 6.133166e-57 | -8.615850e-47 |
| Msa0189560 | Msa0479760 | 0.846919 | 1.604515e-59 | -8.615850e-47 |
| Msa0206040 | Msa0479760 | 0.810775 | 9.744923e-51 | -8.615850e-47 |
| Msa0220400 | Msa0479760 | 0.830135 | 3.483373e-55 | -8.615850e-47 |
| Msa0220990 | Msa0479760 | -0.831311 | 1.793415e-55 | -8.615850e-47 |
| Msa0225790 | Msa0479760 | 0.816099 | 6.584128e-52 | -8.615850e-47 |
| Msa0370580 | Msa0479760 | 0.829082 | 6.281809e-55 | -8.615850e-47 |
| Msa0373120 | Msa0479760 | 0.818196 | 2.223590e-52 | -8.615850e-47 |
| Msa0375330 | Msa0479760 | 0.821351 | 4.228447e-53 | -8.615850e-47 |
| Msa0380400 | Msa0479760 | 0.801817 | 7.528750e-49 | -8.615850e-47 |
| Msa0383870 | Msa0479760 | 0.804384 | 2.217226e-49 | -8.615850e-47 |
| Msa0385930 | Msa0479760 | 0.911893 | 3.626710e-83 | -8.615850e-47 |
| Msa0389080 | Msa0479760 | 0.837014 | 6.673490e-57 | -8.615850e-47 |
| Msa0402070 | Msa0479760 | 0.805706 | 1.172713e-49 | -8.615850e-47 |
| Msa0403480 | Msa0479760 | 0.865795 | 4.557318e-65 | -8.615850e-47 |
| Msa0437020 | Msa0479760 | -0.811411 | 7.094536e-51 | -8.615850e-47 |
| Msa0476170 | Msa0479760 | 0.803672 | 3.117332e-49 | -8.615850e-47 |
| Msa0479760 | Msa0500610 | 0.803074 | 4.146830e-49 | -8.615850e-47 |
| Msa0479760 | Msa0523420 | 0.830259 | 3.247563e-55 | -8.615850e-47 |
| Msa0479760 | Msa0523430 | 0.968689 | 4.912302e-129 | -8.615850e-47 |
| Msa0479760 | Msa0523490 | 0.927554 | 1.000314e-91 | -8.615850e-47 |
| Msa0479760 | Msa0536350 | -0.804924 | 1.710416e-49 | -8.615850e-47 |
| Msa0479760 | Msa0559450 | 0.846344 | 2.304393e-59 | -8.615850e-47 |
| Msa0479760 | Msa0566340 | -0.802821 | 4.677249e-49 | -8.615850e-47 |
| Msa0479760 | Msa0566940 | 0.838672 | 2.501695e-57 | -8.615850e-47 |
| Msa0479760 | Msa0572550 | 0.816750 | 4.707143e-52 | -8.615850e-47 |
| Msa0479760 | Msa0576020 | 0.860435 | 2.070508e-63 | -8.615850e-47 |
| Msa0479760 | Msa0576080 | 0.863190 | 2.970377e-64 | -8.615850e-47 |
| Msa0479760 | Msa0576090 | 0.866461 | 2.803584e-65 | -8.615850e-47 |
| Msa0479760 | Msa0576120 | 0.872669 | 2.662872e-67 | -8.615850e-47 |
| Msa0479760 | Msa0583360 | 0.804828 | 1.790812e-49 | -8.615850e-47 |
| Msa0479760 | Msa0590620 | 0.821521 | 3.863032e-53 | -8.615850e-47 |
| Msa0479760 | Msa0630770 | 0.835449 | 1.666869e-56 | -8.615850e-47 |
| Msa0479760 | Msa0637930 | 0.804346 | 2.257783e-49 | -8.615850e-47 |
| Msa0479760 | Msa0638010 | 0.845995 | 2.867698e-59 | -8.615850e-47 |
| Msa0479760 | Msa0646410 | 0.826963 | 2.032599e-54 | -8.615850e-47 |
| Msa0479760 | Msa0671210 | -0.800384 | 1.478135e-48 | -8.615850e-47 |
| Msa0479760 | Msa0686950 | 0.848152 | 7.351358e-60 | -8.615850e-47 |
| Msa0479760 | Msa0693340 | 0.810112 | 1.355449e-50 | -8.615850e-47 |
| Msa0479760 | Msa0701800 | 0.801516 | 8.679071e-49 | -8.615850e-47 |
| Msa0479760 | Msa0712860 | -0.803316 | 3.695494e-49 | -8.615850e-47 |
| Msa0479760 | Msa0726170 | 0.810560 | 1.084775e-50 | -8.615850e-47 |
| Msa0479760 | Msa0742370 | 0.849709 | 2.716924e-60 | -8.615850e-47 |
| Msa0479760 | Msa0765960 | 0.813750 | 2.185085e-51 | -8.615850e-47 |
| Msa0479760 | Msa0779450 | 0.846049 | 2.772077e-59 | -8.615850e-47 |
| Msa0479760 | Msa0795750 | -0.806570 | 7.714645e-50 | -8.615850e-47 |
| Msa0479760 | Msa0796580 | 0.820138 | 8.034863e-53 | -8.615850e-47 |
| Msa0479760 | Msa0800480 | -0.803518 | 3.354711e-49 | -8.615850e-47 |
| Msa0479760 | Msa0803780 | -0.808590 | 2.874623e-50 | -8.615850e-47 |
| Msa0479760 | Msa0823480 | 0.817215 | 3.701536e-52 | -8.615850e-47 |
| Msa0479760 | Msa0827520 | 0.845596 | 3.680752e-59 | -8.615850e-47 |
| Msa0479760 | Msa0833950 | 0.834287 | 3.270589e-56 | -8.615850e-47 |
| Msa0479760 | Msa0841860 | -0.824983 | 6.003903e-54 | -8.615850e-47 |
| Msa0479760 | Msa0862480 | 0.850127 | 2.075516e-60 | -8.615850e-47 |
| Msa0479760 | Msa0870460 | 0.834671 | 2.619079e-56 | -8.615850e-47 |
| Msa0479760 | Msa0881530 | 0.823823 | 1.125316e-53 | -8.615850e-47 |
| Msa0479760 | Msa0919120 | 0.805075 | 1.590167e-49 | -8.615850e-47 |
| Msa0479760 | Msa0982090 | 0.817390 | 3.380550e-52 | -8.615850e-47 |
| Msa0479760 | Msa1004410 | 0.816113 | 6.537375e-52 | -8.615850e-47 |
| Msa0479760 | Msa1021520 | -0.809668 | 1.688447e-50 | -8.615850e-47 |
| Msa0479760 | Msa1039190 | 0.841824 | 3.760018e-58 | -8.615850e-47 |
| Msa0479760 | Msa1039440 | 0.822401 | 2.415556e-53 | -8.615850e-47 |
| Msa0479760 | Msa1083620 | 0.804880 | 1.746871e-49 | -8.615850e-47 |
| Msa0479760 | Msa1085610 | 0.873412 | 1.500301e-67 | -8.615850e-47 |
| Msa0479760 | Msa1087520 | 0.821744 | 3.430840e-53 | -8.615850e-47 |
| Msa0479760 | Msa1088400 | 0.812851 | 3.443247e-51 | -8.615850e-47 |
| Msa0479760 | Msa1123770 | -0.839720 | 1.338206e-57 | -8.615850e-47 |
| Msa0479760 | Msa1128280 | -0.803295 | 3.731174e-49 | -8.615850e-47 |
| Msa0479760 | Msa1128610 | 0.847169 | 1.370972e-59 | -8.615850e-47 |
| Msa0479760 | Msa1129300 | 0.855961 | 4.438843e-62 | -8.615850e-47 |
| Msa0479760 | Msa1143370 | 0.852728 | 3.815965e-61 | -8.615850e-47 |
| Msa0479760 | Msa1143810 | 0.814314 | 1.640587e-51 | -8.615850e-47 |
| Msa0479760 | Msa1150960 | -0.814042 | 1.884381e-51 | -8.615850e-47 |
| Msa0479760 | Msa1165270 | -0.807997 | 3.845134e-50 | -8.615850e-47 |
| Msa0479760 | Msa1169910 | -0.837296 | 5.652498e-57 | -8.615850e-47 |
| Msa0479760 | Msa1175350 | -0.806272 | 8.917726e-50 | -8.615850e-47 |
| Msa0479760 | Msa1190100 | 0.822672 | 2.089637e-53 | -8.615850e-47 |
| Msa0479760 | Msa1207920 | 0.800733 | 1.255113e-48 | -8.615850e-47 |
| Msa0479760 | Msa1209870 | 0.838933 | 2.141979e-57 | -8.615850e-47 |
| Msa0479760 | Msa1210900 | -0.805842 | 1.098238e-49 | -8.615850e-47 |
| Msa0479760 | Msa1225860 | 0.800887 | 1.166966e-48 | -8.615850e-47 |
| Msa0479760 | Msa1258030 | 0.853506 | 2.284141e-61 | -8.615850e-47 |
| Msa0479760 | Msa1259290 | -0.806953 | 6.403512e-50 | -8.615850e-47 |
| Msa0479760 | Msa1273620 | 0.836928 | 7.018207e-57 | -8.615850e-47 |
| Msa0479760 | Msa1277260 | -0.839031 | 2.020132e-57 | -8.615850e-47 |
| Msa0479760 | Msa1285360 | 0.815186 | 1.051725e-51 | -8.615850e-47 |
| Msa0479760 | Msa1311600 | 0.810229 | 1.278949e-50 | -8.615850e-47 |
| Msa0479760 | Msa1315890 | -0.815886 | 7.345367e-52 | -8.615850e-47 |
| Msa0479760 | Msa1329750 | -0.805173 | 1.516647e-49 | -8.615850e-47 |
| Msa0479760 | Msa1330540 | 0.866950 | 1.959892e-65 | -8.615850e-47 |
| Msa0479760 | Msa1340200 | -0.806770 | 7.000184e-50 | -8.615850e-47 |
| Msa0479760 | Msa1341060 | -0.804602 | 1.997007e-49 | -8.615850e-47 |
| Msa0479760 | Msa1342960 | 0.872960 | 2.128041e-67 | -8.615850e-47 |
| Msa0479760 | Msa1348170 | 0.822424 | 2.386444e-53 | -8.615850e-47 |
| Msa0479760 | Msa1352600 | 0.806341 | 8.622992e-50 | -8.615850e-47 |
| Msa0479760 | Msa1356600 | 0.819205 | 1.312437e-52 | -8.615850e-47 |
| Msa0479760 | Msa1361670 | 0.845874 | 3.093105e-59 | -8.615850e-47 |
| Msa0479760 | Msa1364350 | 0.846850 | 1.676095e-59 | -8.615850e-47 |
| Msa0479760 | Msa1372770 | 0.842577 | 2.375763e-58 | -8.615850e-47 |
| Msa0479760 | Msa1375610 | 0.801629 | 8.226829e-49 | -8.615850e-47 |
| Msa0479760 | Msa1375970 | 0.824865 | 6.402822e-54 | -8.615850e-47 |
| Msa0479760 | Msa1376550 | 0.803267 | 3.783061e-49 | -8.615850e-47 |
| Msa0479760 | Msa1382380 | 0.819808 | 9.560191e-53 | -8.615850e-47 |
| Msa0479760 | Msa1385720 | -0.839793 | 1.280881e-57 | -8.615850e-47 |
| Msa0479760 | Msa1388030 | 0.813729 | 2.208936e-51 | -8.615850e-47 |
| Msa0479760 | Msa1389900 | -0.803242 | 3.828086e-49 | -8.615850e-47 |
| Msa0479760 | Msa1398450 | 0.812546 | 4.014820e-51 | -8.615850e-47 |
| Msa0479760 | Msa1428230 | 0.800598 | 1.337121e-48 | -8.615850e-47 |
| Msa0479760 | Msa1431510 | 0.837643 | 4.604270e-57 | -8.615850e-47 |
| Msa0479760 | Msa1433870 | -0.810406 | 1.171000e-50 | -8.615850e-47 |
| Msa0479760 | Msa1434090 | -0.829597 | 4.709975e-55 | -8.615850e-47 |
| Msa0479760 | Msa1445910 | 0.826230 | 3.040150e-54 | -8.615850e-47 |
| Msa0479760 | Msa1457390 | 0.823152 | 1.615327e-53 | -8.615850e-47 |
| Msa0479760 | Msa1459130 | 0.802103 | 6.576191e-49 | -8.615850e-47 |
| Msa0479760 | Msa1464090 | -0.812279 | 4.592796e-51 | -8.615850e-47 |
| Msa0240900 | Msa0479760 | -0.808875 | 2.498133e-50 | -8.615850e-47 |
| Msa0260580 | Msa0479760 | 0.837404 | 5.302813e-57 | -8.615850e-47 |
| Msa0260640 | Msa0479760 | 0.822262 | 2.602994e-53 | -8.615850e-47 |
| Msa0269220 | Msa0479760 | 0.801944 | 7.089173e-49 | -8.615850e-47 |
| Msa0297610 | Msa0479760 | -0.810943 | 8.964433e-51 | -8.615850e-47 |
| Msa0300280 | Msa0479760 | -0.824166 | 9.353341e-54 | -8.615850e-47 |
| Msa0319920 | Msa0479760 | -0.805736 | 1.155697e-49 | -8.615850e-47 |
| Msa0326170 | Msa0479760 | 0.828865 | 7.088509e-55 | -8.615850e-47 |
| Msa0334450 | Msa0479760 | 0.860482 | 2.002563e-63 | -8.615850e-47 |
| Msa0337710 | Msa0479760 | -0.821936 | 3.096420e-53 | -8.615850e-47 |
| Msa0343500 | Msa0479760 | -0.857207 | 1.910661e-62 | -8.615850e-47 |
| Msa0355080 | Msa0479760 | 0.809100 | 2.235682e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479760 | MtrunA17_Chr3g0143911 | 99.797 | 492 | 1 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1028 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479760 | AT4G35090.1 | 87.398 | 492 | 62 | 0 | 1 | 492 | 1 | 492 | 0.0 | 920 |
| Msa0479760 | AT4G35090.3 | 87.090 | 488 | 63 | 0 | 5 | 492 | 5 | 492 | 0.0 | 910 |
| Msa0479760 | AT1G20630.1 | 85.569 | 492 | 71 | 0 | 1 | 492 | 1 | 492 | 0.0 | 895 |
| Msa0479760 | AT4G35090.2 | 87.553 | 474 | 59 | 0 | 1 | 474 | 1 | 474 | 0.0 | 889 |
| Msa0479760 | AT1G20620.1 | 78.455 | 492 | 106 | 0 | 1 | 492 | 1 | 492 | 0.0 | 843 |
| Msa0479760 | AT1G20620.6 | 78.234 | 487 | 106 | 0 | 6 | 492 | 65 | 551 | 0.0 | 833 |
| Msa0479760 | AT1G20620.5 | 77.033 | 492 | 106 | 1 | 1 | 492 | 1 | 485 | 0.0 | 822 |
| Msa0479760 | AT1G20620.2 | 78.282 | 419 | 91 | 0 | 1 | 419 | 1 | 419 | 0.0 | 715 |
| Msa0479760 | AT1G20620.4 | 76.393 | 377 | 89 | 0 | 116 | 492 | 1 | 377 | 0.0 | 637 |
| Msa0479760 | AT1G20620.7 | 77.818 | 275 | 61 | 0 | 116 | 390 | 1 | 275 | 7.34e-167 | 473 |
Find 188 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGGGTCTCTCAAGGTTTC+AGG | 0.120854 | 3_3:-84931437 | None:intergenic |
| AACATGAGGCCTAGCATTTA+AGG | 0.173184 | 3_3:+84933907 | Msa0479760:CDS |
| GCGCTTACAATTCTCCTTTC+TGG | 0.174679 | 3_3:+84930110 | Msa0479760:CDS |
| GAGAACATGTGAAGACTTTC+TGG | 0.177485 | 3_3:-84932184 | None:intergenic |
| ACTACATCTGACGTTATATT+AGG | 0.208614 | 3_3:+84934249 | Msa0479760:three_prime_UTR |
| ACTTATCAATGCAATCAATT+TGG | 0.222368 | 3_3:-84934200 | None:intergenic |
| GGATCCGTTCCCTATCAAAT+TGG | 0.267128 | 3_3:-84931256 | None:intergenic |
| GTTGGATCCTCCCACCTTAA+TGG | 0.271983 | 3_3:-84932365 | None:intergenic |
| CTTTCCCAGCCTTGTTGATC+AGG | 0.273529 | 3_3:-84932279 | None:intergenic |
| TGTTTGTTTGGATAATTTAA+AGG | 0.280785 | 3_3:+84933990 | Msa0479760:three_prime_UTR |
| TATAGGCACATGGATGGTTT+TGG | 0.286155 | 3_3:+84932241 | Msa0479760:CDS |
| ATTCTCCTGGATGTGGGACT+TGG | 0.295541 | 3_3:-84932131 | None:intergenic |
| CTGGCATGGACAACACGTTC+TGG | 0.317458 | 3_3:-84931278 | None:intergenic |
| TGGATGTGGGACTTGGGGTT+GGG | 0.323157 | 3_3:-84932124 | None:intergenic |
| TTAAGAGCATGGACCATATC+TGG | 0.327136 | 3_3:-84932100 | None:intergenic |
| TTCTCCTGGATGTGGGACTT+GGG | 0.330541 | 3_3:-84932130 | None:intergenic |
| CTGGATGTGGGACTTGGGGT+TGG | 0.333029 | 3_3:-84932125 | None:intergenic |
| TGCTTGAAGTTGTTCTGCTT+TGG | 0.342575 | 3_3:-84933520 | None:intergenic |
| CTCCTTCCTGTTTGATGATG+TGG | 0.344839 | 3_3:+84932204 | Msa0479760:CDS |
| GCGGGAAGTTGCAGATAGTT+TGG | 0.347365 | 3_3:-84932718 | None:intergenic |
| CAGGGTAACTTTGACCTTGT+TGG | 0.356144 | 3_3:+84932034 | Msa0479760:intron |
| CCTTTCTGGACTACAAATTC+CGG | 0.359209 | 3_3:+84930124 | Msa0479760:CDS |
| TTCATTAATTTCTACCTCTC+TGG | 0.360898 | 3_3:-84931483 | None:intergenic |
| TATGATAAAGGATGTTTGTT+TGG | 0.363957 | 3_3:+84933978 | Msa0479760:three_prime_UTR |
| CCCATGAAATCCGCAGCATC+TGG | 0.368012 | 3_3:+84933719 | Msa0479760:CDS |
| CAAATTCCGGTGCACCTGTT+TGG | 0.371503 | 3_3:+84930137 | Msa0479760:CDS |
| ACCCTTTGCACTTGCTCCCC+TGG | 0.372101 | 3_3:-84931297 | None:intergenic |
| CTGGAGAGCGATACCGATCT+TGG | 0.372596 | 3_3:+84933545 | Msa0479760:CDS |
| AAAAGCTTGCCCAATTTGAT+AGG | 0.374612 | 3_3:+84931246 | Msa0479760:CDS |
| AGTCCCACATCCAGGAGAAT+TGG | 0.375895 | 3_3:+84932134 | Msa0479760:CDS |
| CTGTCTTCTTCGTTCATGAC+GGG | 0.379692 | 3_3:+84932068 | Msa0479760:CDS |
| TGATAATCTTCCAAGAGAAT+TGG | 0.382249 | 3_3:-84931215 | None:intergenic |
| TTTGGCAGGTCCAATTCTCT+TGG | 0.391620 | 3_3:+84931205 | Msa0479760:intron |
| TCCAGATGCTGCGGATTTCA+TGG | 0.392167 | 3_3:-84933720 | None:intergenic |
| GTTGGAGGAAGAGGCCATTA+AGG | 0.394703 | 3_3:+84932351 | Msa0479760:CDS |
| TCAAATTTGTCTTCGTGAGC+AGG | 0.405045 | 3_3:-84932472 | None:intergenic |
| CGGTGGAGAAGAAGAAGAAA+TGG | 0.408470 | 3_3:-84929852 | None:intergenic |
| CTACATCTGACGTTATATTA+GGG | 0.413036 | 3_3:+84934250 | Msa0479760:three_prime_UTR |
| TTGCACTTGCTCCCCTGGCA+TGG | 0.415695 | 3_3:-84931292 | None:intergenic |
| TCCTTCCTGTTTGATGATGT+GGG | 0.418017 | 3_3:+84932205 | Msa0479760:CDS |
| GATGAGTTGTTGTTCCAAAC+AGG | 0.420786 | 3_3:-84930151 | None:intergenic |
| TGGGTGTCCCACAAGATTAT+AGG | 0.422410 | 3_3:+84932224 | Msa0479760:CDS |
| CCTTCAGCCCGTAGGTCGCC+TGG | 0.422999 | 3_3:+84932543 | Msa0479760:CDS |
| AATTTCAACATCTGCAACTC+TGG | 0.423648 | 3_3:-84933954 | None:intergenic |
| TGTCCTGCCATTATTGTGCC+TGG | 0.427513 | 3_3:+84932619 | Msa0479760:CDS |
| GTATTGTTGTATACCTTGTA+TGG | 0.430027 | 3_3:-84929913 | None:intergenic |
| CCTGTCTTCTTCGTTCATGA+CGG | 0.433221 | 3_3:+84932067 | Msa0479760:CDS |
| ATTGTTGTGGTGAGCACACT+TGG | 0.434174 | 3_3:-84932749 | None:intergenic |
| GTAATAGTAGAGAGAAAGGA+TGG | 0.437046 | 3_3:-84929879 | None:intergenic |
| GCAGATTTCCTACGAGCTCC+TGG | 0.438797 | 3_3:+84931359 | Msa0479760:CDS |
| AGGTCAATTACTTCCCTTCA+AGG | 0.445115 | 3_3:+84932964 | Msa0479760:intron |
| CTTGGAAGATTATCATCTTG+TGG | 0.451741 | 3_3:+84931223 | Msa0479760:CDS |
| ACCTCTAGATCCAACGGTTA+GGG | 0.454007 | 3_3:-84930173 | None:intergenic |
| ATATACACCAGGCACAATAA+TGG | 0.457625 | 3_3:-84932626 | None:intergenic |
| ATGCAGGCTGATCGTTCTCT+TGG | 0.464966 | 3_3:+84933862 | Msa0479760:intron |
| TTCTCCAATTCTCCTGGATG+TGG | 0.467363 | 3_3:-84932138 | None:intergenic |
| CAAGGATTCTCCAATTCTCC+TGG | 0.469085 | 3_3:-84932144 | None:intergenic |
| CCATGTGCCTATAATCTTGT+GGG | 0.470182 | 3_3:-84932231 | None:intergenic |
| GAGGGTCTCTCAAGGTTTCA+GGG | 0.471242 | 3_3:-84931436 | None:intergenic |
| GTTGGTAATAGTAGAGAGAA+AGG | 0.471489 | 3_3:-84929883 | None:intergenic |
| TTTCTCTGCATGCCGTGAAA+AGG | 0.473118 | 3_3:+84933034 | Msa0479760:CDS |
| TACCTCTAGATCCAACGGTT+AGG | 0.473805 | 3_3:-84930174 | None:intergenic |
| AAGATAGATTTCTCCGCAGA+TGG | 0.473911 | 3_3:+84933668 | Msa0479760:CDS |
| CAAGATCGGTATCGCTCTCC+AGG | 0.473917 | 3_3:-84933544 | None:intergenic |
| CTGGATCTCATACTGGTCTC+AGG | 0.475961 | 3_3:+84933738 | Msa0479760:CDS |
| GTTTCATGAATTTCATTCAC+AGG | 0.477320 | 3_3:+84932782 | Msa0479760:CDS |
| TGGCATGGACAACACGTTCT+GGG | 0.477969 | 3_3:-84931277 | None:intergenic |
| CAGAACGTGTTGTCCATGCC+AGG | 0.477991 | 3_3:+84931279 | Msa0479760:CDS |
| TCCTGTTCGTCATGCAGAAA+AGG | 0.478892 | 3_3:+84932992 | Msa0479760:CDS |
| ATGTTGAAATTGTATGATAA+AGG | 0.480801 | 3_3:+84933966 | Msa0479760:three_prime_UTR |
| CGAACAGGATCATGCCTTGA+AGG | 0.481337 | 3_3:-84932978 | None:intergenic |
| CTATGTTCTTGTTCAAGACC+AGG | 0.484090 | 3_3:-84932561 | None:intergenic |
| GTGTGTGTTATTTATATATG+AGG | 0.485036 | 3_3:+84929774 | Msa0479760:five_prime_UTR |
| CAGAACAACTTCAAGCAGCC+TGG | 0.486042 | 3_3:+84933526 | Msa0479760:CDS |
| GATCCGTTCCCTATCAAATT+GGG | 0.489050 | 3_3:-84931255 | None:intergenic |
| TCTCCTGGATGTGGGACTTG+GGG | 0.492998 | 3_3:-84932129 | None:intergenic |
| TTTCCCAGCCTTGTTGATCA+GGG | 0.494239 | 3_3:-84932278 | None:intergenic |
| GAAAGGAGAATTGTAAGCGC+TGG | 0.495605 | 3_3:-84930107 | None:intergenic |
| TTATATTAGGGAGGAAAGTA+AGG | 0.497358 | 3_3:+84934262 | Msa0479760:three_prime_UTR |
| GTAGGAAATCTGCACAAGTC+AGG | 0.497677 | 3_3:-84931349 | None:intergenic |
| GAGAAATTAGCAGTAGGAAT+GGG | 0.501006 | 3_3:-84933017 | None:intergenic |
| CAGGCGACCTACGGGCTGAA+GGG | 0.503163 | 3_3:-84932542 | None:intergenic |
| GTTCAAGACCAGGCGACCTA+CGG | 0.504173 | 3_3:-84932551 | None:intergenic |
| TGGGGTTGGGTTTAAGAGCA+TGG | 0.506473 | 3_3:-84932111 | None:intergenic |
| CAGCAGCAATTGAATCATAC+AGG | 0.508681 | 3_3:-84932408 | None:intergenic |
| TCGCAACAACCTTAAATGCT+AGG | 0.510006 | 3_3:-84933916 | None:intergenic |
| GGACACCCACATCATCAAAC+AGG | 0.511274 | 3_3:-84932210 | None:intergenic |
| ACCGATCTTGGGCACCCGAC+AGG | 0.511670 | 3_3:+84933557 | Msa0479760:CDS |
| CAGTGTACGTGAAATTTCAC+TGG | 0.512177 | 3_3:+84932302 | Msa0479760:CDS |
| ACCTGTCGGGTGCCCAAGAT+CGG | 0.512897 | 3_3:-84933558 | None:intergenic |
| GCAGCATCTGGATCTCATAC+TGG | 0.513786 | 3_3:+84933731 | Msa0479760:CDS |
| ATGACAGGTGTCTGAACTCC+AGG | 0.514052 | 3_3:-84931377 | None:intergenic |
| TAGAGAGAAAGGATGGAGGA+CGG | 0.516706 | 3_3:-84929872 | None:intergenic |
| GTATACCTTGTATGGATCCA+TGG | 0.516916 | 3_3:-84929905 | None:intergenic |
| TATTCCCTGATCAACAAGGC+TGG | 0.522948 | 3_3:+84932274 | Msa0479760:CDS |
| TTCAAGACCAGGCGACCTAC+GGG | 0.524652 | 3_3:-84932550 | None:intergenic |
| CAAGTCTTAGTTACATCAAG+TGG | 0.525209 | 3_3:-84932502 | None:intergenic |
| TTGAGTAGCATGGCTGTGGT+TGG | 0.529136 | 3_3:-84932383 | None:intergenic |
| GATTCACAGAGGCACAGACT+TGG | 0.529651 | 3_3:+84932694 | Msa0479760:CDS |
| TGGAGAGCGATACCGATCTT+GGG | 0.535088 | 3_3:+84933546 | Msa0479760:CDS |
| CGGATTTCATGGGTGACGCG+TGG | 0.535385 | 3_3:-84933709 | None:intergenic |
| CAACCCCAAGTCCCACATCC+AGG | 0.536425 | 3_3:+84932126 | Msa0479760:CDS |
| AGAGAAATTAGCAGTAGGAA+TGG | 0.536458 | 3_3:-84933018 | None:intergenic |
| AGAGAAAGGATGGAGGACGG+TGG | 0.539677 | 3_3:-84929869 | None:intergenic |
| CCAGGCGACCTACGGGCTGA+AGG | 0.540862 | 3_3:-84932543 | None:intergenic |
| GTAGAGAAACGCACAATGAC+AGG | 0.540987 | 3_3:-84931392 | None:intergenic |
| TCCATGTGCCTATAATCTTG+TGG | 0.541036 | 3_3:-84932232 | None:intergenic |
| CACTTGATGTAACTAAGACT+TGG | 0.542839 | 3_3:+84932503 | Msa0479760:CDS |
| CTCTCTACTATTACCAACCA+TGG | 0.543386 | 3_3:+84929888 | Msa0479760:exon |
| GCACACTTGGGAGCATTAGC+GGG | 0.543955 | 3_3:-84932736 | None:intergenic |
| AGCACACTTGGGAGCATTAG+CGG | 0.545062 | 3_3:-84932737 | None:intergenic |
| CTGTATGATTCAATTGCTGC+TGG | 0.545137 | 3_3:+84932409 | Msa0479760:CDS |
| TGAAGGGGTATAATGTCCTC+AGG | 0.545718 | 3_3:-84932526 | None:intergenic |
| GCCAGGGGAGCAAGTGCAAA+GGG | 0.546598 | 3_3:+84931296 | Msa0479760:CDS |
| AGCTCAACGAGTCACGTACA+TGG | 0.546903 | 3_3:-84934061 | None:intergenic |
| AAAGCTTGCCCAATTTGATA+GGG | 0.548471 | 3_3:+84931247 | Msa0479760:CDS |
| TCTCCAATTCTCCTGGATGT+GGG | 0.550324 | 3_3:-84932137 | None:intergenic |
| TGCCAGGGGAGCAAGTGCAA+AGG | 0.551070 | 3_3:+84931295 | Msa0479760:CDS |
| CCAGATGCTGCGGATTTCAT+GGG | 0.552199 | 3_3:-84933719 | None:intergenic |
| GAAGTGTCTGTTGGAGGAAG+AGG | 0.554768 | 3_3:+84932342 | Msa0479760:CDS |
| CCGTCATGAACGAAGAAGAC+AGG | 0.555643 | 3_3:-84932067 | None:intergenic |
| TTTCATTCACAGGGATGAAG+AGG | 0.555667 | 3_3:+84932792 | Msa0479760:CDS |
| TCCCTAACCGTTGGATCTAG+AGG | 0.556180 | 3_3:+84930172 | Msa0479760:CDS |
| TTGCCCAATTTGATAGGGAA+CGG | 0.556792 | 3_3:+84931252 | Msa0479760:CDS |
| ATAGTAGAGAGAAAGGATGG+AGG | 0.562175 | 3_3:-84929876 | None:intergenic |
| GTTGTTCCAAACAGGTGCAC+CGG | 0.562996 | 3_3:-84930143 | None:intergenic |
| AGGCGACCTACGGGCTGAAG+GGG | 0.563132 | 3_3:-84932541 | None:intergenic |
| AACAACTCATCCCTAACCGT+TGG | 0.569919 | 3_3:+84930163 | Msa0479760:CDS |
| GGAGAATTGTAAGCGCTGGA+TGG | 0.570856 | 3_3:-84930103 | None:intergenic |
| AATTGTAAGCGCTGGATGGA+CGG | 0.572978 | 3_3:-84930099 | None:intergenic |
| ATTCACAGAGGCACAGACTT+GGG | 0.574309 | 3_3:+84932695 | Msa0479760:CDS |
| ATTCCCTGATCAACAAGGCT+GGG | 0.574864 | 3_3:+84932275 | Msa0479760:CDS |
| GAAAGTGAGAAAAGAAGTCA+AGG | 0.576589 | 3_3:-84932162 | None:intergenic |
| ACCTTGTATGGATCCATGGT+TGG | 0.577182 | 3_3:-84929901 | None:intergenic |
| CCGGAATTTGTAGTCCAGAA+AGG | 0.579292 | 3_3:-84930124 | None:intergenic |
| GGATTTCATGGGTGACGCGT+GGG | 0.579795 | 3_3:-84933708 | None:intergenic |
| ATGTGGTGTGAAGTGTCTGT+TGG | 0.580105 | 3_3:+84932333 | Msa0479760:CDS |
| GAACAGGATCATGCCTTGAA+GGG | 0.580459 | 3_3:-84932977 | None:intergenic |
| GGAGGAAGAGGCCATTAAGG+TGG | 0.581156 | 3_3:+84932354 | Msa0479760:CDS |
| ACCAACCATGGATCCATACA+AGG | 0.581655 | 3_3:+84929900 | Msa0479760:exon |
| TTCATGGGTGACGCGTGGGT+CGG | 0.582291 | 3_3:-84933704 | None:intergenic |
| TGAACAAACAGTTTCCACTC+AGG | 0.583241 | 3_3:-84932439 | None:intergenic |
| AGATAGATTTCTCCGCAGAT+GGG | 0.587386 | 3_3:+84933669 | Msa0479760:CDS |
| CAGACACTTCACACCACATG+TGG | 0.589761 | 3_3:-84932329 | None:intergenic |
| CAAGATTATAGGCACATGGA+TGG | 0.589982 | 3_3:+84932235 | Msa0479760:CDS |
| TAGATTTCTCCGCAGATGGG+TGG | 0.591794 | 3_3:+84933672 | Msa0479760:CDS |
| GAGGAAGAGGCCATTAAGGT+GGG | 0.593020 | 3_3:+84932355 | Msa0479760:CDS |
| TTGCATCTCATCTGAACATG+AGG | 0.594906 | 3_3:+84933893 | Msa0479760:CDS |
| CAGGAAAGTTGTTTCCAACA+AGG | 0.596437 | 3_3:-84932048 | None:intergenic |
| GGTCTTGAGTAGCATGGCTG+TGG | 0.596746 | 3_3:-84932387 | None:intergenic |
| CCCACAAGATTATAGGCACA+TGG | 0.598312 | 3_3:+84932231 | Msa0479760:CDS |
| TGGTGTGAAGTGTCTGTTGG+AGG | 0.598470 | 3_3:+84932336 | Msa0479760:CDS |
| AGAACGTGTTGTCCATGCCA+GGG | 0.598996 | 3_3:+84931280 | Msa0479760:CDS |
| TTTCATGAATTTCATTCACA+GGG | 0.601023 | 3_3:+84932783 | Msa0479760:CDS |
| GAACGTGTTGTCCATGCCAG+GGG | 0.604058 | 3_3:+84931281 | Msa0479760:CDS |
| ACACCAGGCACAATAATGGC+AGG | 0.606260 | 3_3:-84932622 | None:intergenic |
| AAAACCTCGAGGGTCTCTCA+AGG | 0.607779 | 3_3:-84931444 | None:intergenic |
| ATGATAAGATGCTTCAAACC+AGG | 0.609656 | 3_3:+84932656 | Msa0479760:CDS |
| CACATATTCCCTGATCAACA+AGG | 0.618103 | 3_3:+84932270 | Msa0479760:CDS |
| ATCAGCATAAGAGAAAATCC+TGG | 0.623303 | 3_3:-84932674 | None:intergenic |
| ATTATACCCCTTCAGCCCGT+AGG | 0.626812 | 3_3:+84932535 | Msa0479760:CDS |
| ATTTCACAGCAAAACCTCGA+GGG | 0.627533 | 3_3:-84931454 | None:intergenic |
| AGATATACCTCTAGATCCAA+CGG | 0.631010 | 3_3:-84930179 | None:intergenic |
| TTGTTGTGGTGAGCACACTT+GGG | 0.632968 | 3_3:-84932748 | None:intergenic |
| CATGCAGAGAAATTAGCAGT+AGG | 0.633318 | 3_3:-84933023 | None:intergenic |
| TGAAATTCATGAAACCCTCA+TGG | 0.640371 | 3_3:-84932774 | None:intergenic |
| TCTGAACTCCAGGAGCTCGT+AGG | 0.643310 | 3_3:-84931367 | None:intergenic |
| TGTGCCTGGTGTATATTACT+CGG | 0.653190 | 3_3:+84932633 | Msa0479760:CDS |
| CATACAGGTCTTGAGTAGCA+TGG | 0.654493 | 3_3:-84932393 | None:intergenic |
| TTTCACTGGAAGCCCACATG+TGG | 0.658894 | 3_3:+84932316 | Msa0479760:CDS |
| AAGTCTTAGTTACATCAAGT+GGG | 0.661737 | 3_3:-84932501 | None:intergenic |
| AACCCTCATGGTGATTGTTG+TGG | 0.663659 | 3_3:-84932762 | None:intergenic |
| CACCACAACAATCACCATGA+GGG | 0.667620 | 3_3:+84932760 | Msa0479760:CDS |
| TCTACTGTCATTCATGAACG+TGG | 0.669221 | 3_3:+84931410 | Msa0479760:CDS |
| CATCTGACGTTATATTAGGG+AGG | 0.672089 | 3_3:+84934253 | Msa0479760:three_prime_UTR |
| ACCCACATCATCAAACAGGA+AGG | 0.673105 | 3_3:-84932206 | None:intergenic |
| ATAAAGCATCCACCCATCTG+CGG | 0.685814 | 3_3:-84933681 | None:intergenic |
| AGTATGAGATCCAGATGCTG+CGG | 0.691680 | 3_3:-84933729 | None:intergenic |
| AATTTCACAGCAAAACCTCG+AGG | 0.694899 | 3_3:-84931455 | None:intergenic |
| CTGCTGGTAACTATCCTGAG+TGG | 0.697296 | 3_3:+84932425 | Msa0479760:CDS |
| AGACACTTCACACCACATGT+GGG | 0.702081 | 3_3:-84932328 | None:intergenic |
| TCATCCGAGTAATATACACC+AGG | 0.707390 | 3_3:-84932637 | None:intergenic |
| GAAGAGGCCATTAAGGTGGG+AGG | 0.707656 | 3_3:+84932358 | Msa0479760:CDS |
| TCTCTTATGCTGATTCACAG+AGG | 0.708120 | 3_3:+84932683 | Msa0479760:CDS |
| TCACCACAACAATCACCATG+AGG | 0.719886 | 3_3:+84932759 | Msa0479760:CDS |
| TGTAACTAAGACTTGGCCTG+AGG | 0.723437 | 3_3:+84932510 | Msa0479760:CDS |
| GAAACCTTGAGAGACCCTCG+AGG | 0.734649 | 3_3:+84931440 | Msa0479760:CDS |
| TGTGAAATTCTACACCAGAG+AGG | 0.748378 | 3_3:+84931469 | Msa0479760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAATAATTTAAAGATA+TGG | - | chr3_3:84930261-84930280 | None:intergenic | 10.0% |
| !! | GAAAAAAGAAAAAAGAAAAT+AGG | + | chr3_3:84929730-84929749 | Msa0479760:five_prime_UTR | 15.0% |
| !! | TCAATAAATAAACAAAACTA+CGG | - | chr3_3:84930011-84930030 | None:intergenic | 15.0% |
| !!! | AATCTATCAATTTGTTTTTT+TGG | + | chr3_3:84930038-84930057 | Msa0479760:intron | 15.0% |
| !!! | TTTAACATAATTTGATTTCT+TGG | + | chr3_3:84930278-84930297 | Msa0479760:intron | 15.0% |
| !! | TGTTAAATTATATGATTTCA+CGG | + | chr3_3:84930318-84930337 | Msa0479760:intron | 15.0% |
| !!! | TGTTTTCATAAACTATAATA+AGG | + | chr3_3:84930671-84930690 | Msa0479760:intron | 15.0% |
| !!! | GTTTTCATAAACTATAATAA+GGG | + | chr3_3:84930672-84930691 | Msa0479760:intron | 15.0% |
| !! | TTTAATTAAATGCTACATTT+GGG | - | chr3_3:84931679-84931698 | None:intergenic | 15.0% |
| !! | TAGCATTTAATTAAACAATT+TGG | + | chr3_3:84931684-84931703 | Msa0479760:intron | 15.0% |
| !!! | GACAACATTTTTTTTAAATA+AGG | - | chr3_3:84933155-84933174 | None:intergenic | 15.0% |
| !!! | TAAGAATATTTCACAAATTT+TGG | - | chr3_3:84933204-84933223 | None:intergenic | 15.0% |
| !! | ATAAGTTGTTTATCCAAATA+TGG | - | chr3_3:84930434-84930453 | None:intergenic | 20.0% |
| !!! | TTATATTATTTTACCCCTTT+TGG | + | chr3_3:84931187-84931206 | Msa0479760:intron | 20.0% |
| !! | TTAATTAAATGCTACATTTG+GGG | - | chr3_3:84931678-84931697 | None:intergenic | 20.0% |
| !! | GTTTAATTAAATGCTACATT+TGG | - | chr3_3:84931680-84931699 | None:intergenic | 20.0% |
| !! | TTAATTAAACAATTTGGTCT+AGG | + | chr3_3:84931690-84931709 | Msa0479760:intron | 20.0% |
| !! | TAATTAAACAATTTGGTCTA+GGG | + | chr3_3:84931691-84931710 | Msa0479760:intron | 20.0% |
| !! | TTGAAATTTCAAAGTACAAA+GGG | - | chr3_3:84931791-84931810 | None:intergenic | 20.0% |
| !!! | TTTGAAATTTCAAAGTACAA+AGG | - | chr3_3:84931792-84931811 | None:intergenic | 20.0% |
| !!! | GACAATAATTGTTTTAAAAG+AGG | + | chr3_3:84931953-84931972 | Msa0479760:intron | 20.0% |
| !!! | TGCAAATTAATTTGAAGTTT+AGG | + | chr3_3:84933332-84933351 | Msa0479760:intron | 20.0% |
| !! | ATGTTGAAATTGTATGATAA+AGG | + | chr3_3:84933966-84933985 | Msa0479760:three_prime_UTR | 20.0% |
| !! | TGTTTGTTTGGATAATTTAA+AGG | + | chr3_3:84933990-84934009 | Msa0479760:three_prime_UTR | 20.0% |
| !!! | TTGCATTGATAAGTTTTATT+TGG | + | chr3_3:84934209-84934228 | Msa0479760:three_prime_UTR | 20.0% |
| !!! | TTGATAAGTTTTATTTGGTT+AGG | + | chr3_3:84934214-84934233 | Msa0479760:three_prime_UTR | 20.0% |
| ! | AAAATAGGAGAGTGAAAAAA+GGG | + | chr3_3:84929745-84929764 | Msa0479760:five_prime_UTR | 25.0% |
| !!! | GTGTGTGTTATTTATATATG+AGG | + | chr3_3:84929774-84929793 | Msa0479760:five_prime_UTR | 25.0% |
| ! | AAATATGCGCTTATAGTATA+AGG | + | chr3_3:84930408-84930427 | Msa0479760:intron | 25.0% |
| ! | TTATAGTATAAGGCCATATT+TGG | + | chr3_3:84930418-84930437 | Msa0479760:intron | 25.0% |
| ! | TGGTATATGATAGAATACTA+TGG | + | chr3_3:84930576-84930595 | Msa0479760:intron | 25.0% |
| ! | CAGTTATATCAAAAACAGTT+AGG | - | chr3_3:84930810-84930829 | None:intergenic | 25.0% |
| ! | TGATATAACTGAAGCTATAA+TGG | + | chr3_3:84930819-84930838 | Msa0479760:intron | 25.0% |
| ! | GATATAACTGAAGCTATAAT+GGG | + | chr3_3:84930820-84930839 | Msa0479760:intron | 25.0% |
| ! | GATTGTGTTGAAACTATTAT+CGG | - | chr3_3:84931624-84931643 | None:intergenic | 25.0% |
| ! | CTGTAATTATATTTAGTCAC+TGG | - | chr3_3:84931855-84931874 | None:intergenic | 25.0% |
| !!! | TTGTTTTAAAAGAGGTGATA+TGG | + | chr3_3:84931961-84931980 | Msa0479760:intron | 25.0% |
| ! | TTTCATGAATTTCATTCACA+GGG | + | chr3_3:84932783-84932802 | Msa0479760:CDS | 25.0% |
| !! | TATCACATTTAGAGTTATCA+TGG | - | chr3_3:84932883-84932902 | None:intergenic | 25.0% |
| ! | GAAGTAATTGACCTATAAAA+TGG | - | chr3_3:84932958-84932977 | None:intergenic | 25.0% |
| ! | AAAAATCTATGATCTTTCGT+TGG | + | chr3_3:84933237-84933256 | Msa0479760:intron | 25.0% |
| ! | TTAATATTTAACCAAGGTAG+TGG | - | chr3_3:84933307-84933326 | None:intergenic | 25.0% |
| ! | ACCTTGGTTAAATATTAAGT+TGG | + | chr3_3:84933309-84933328 | Msa0479760:intron | 25.0% |
| ! | ACCAACTTAATATTTAACCA+AGG | - | chr3_3:84933313-84933332 | None:intergenic | 25.0% |
| ! | TATAAAATAAATGACGAGTG+AGG | + | chr3_3:84933404-84933423 | Msa0479760:intron | 25.0% |
| ! | TATTGTTTAAACAGCTTTAC+TGG | - | chr3_3:84933445-84933464 | None:intergenic | 25.0% |
| ! | TGTTTAAACAATACCTGTAT+TGG | + | chr3_3:84933452-84933471 | Msa0479760:intron | 25.0% |
| ! | GTTTAAACAATACCTGTATT+GGG | + | chr3_3:84933453-84933472 | Msa0479760:intron | 25.0% |
| ! | TTTAAACAATACCTGTATTG+GGG | + | chr3_3:84933454-84933473 | Msa0479760:intron | 25.0% |
| !! | TCATATCAGTATTTTGTAAC+AGG | - | chr3_3:84933585-84933604 | None:intergenic | 25.0% |
| ! | TATGATAAAGGATGTTTGTT+TGG | + | chr3_3:84933978-84933997 | Msa0479760:three_prime_UTR | 25.0% |
| ! | ACTTATCAATGCAATCAATT+TGG | - | chr3_3:84934203-84934222 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTATTTGGTTAGG+AGG | + | chr3_3:84934217-84934236 | Msa0479760:three_prime_UTR | 25.0% |
| GAAAATAGGAGAGTGAAAAA+AGG | + | chr3_3:84929744-84929763 | Msa0479760:five_prime_UTR | 30.0% | |
| AAATAGGAGAGTGAAAAAAG+GGG | + | chr3_3:84929746-84929765 | Msa0479760:five_prime_UTR | 30.0% | |
| GTATTGTTGTATACCTTGTA+TGG | - | chr3_3:84929916-84929935 | None:intergenic | 30.0% | |
| TGGATGTCATAACATTAAAC+TGG | - | chr3_3:84930356-84930375 | None:intergenic | 30.0% | |
| ! | GACATGTTATCTGTTTTCAT+AGG | + | chr3_3:84930729-84930748 | Msa0479760:intron | 30.0% |
| !! | TCGTACATGTGATACTTTTT+AGG | - | chr3_3:84930759-84930778 | None:intergenic | 30.0% |
| ATGTTATTATGAGCAGCTTA+TGG | + | chr3_3:84930881-84930900 | Msa0479760:intron | 30.0% | |
| AAGTTATGATATGTCACAAC+TGG | - | chr3_3:84930921-84930940 | None:intergenic | 30.0% | |
| GGCGTGGTTTATATAAAAAT+TGG | - | chr3_3:84931022-84931041 | None:intergenic | 30.0% | |
| TCGTAATTAGTTATCACCAT+TGG | + | chr3_3:84931073-84931092 | Msa0479760:intron | 30.0% | |
| TGTAAAGTTCAGGGTTAATT+TGG | + | chr3_3:84931132-84931151 | Msa0479760:intron | 30.0% | |
| TGATAATCTTCCAAGAGAAT+TGG | - | chr3_3:84931218-84931237 | None:intergenic | 30.0% | |
| TTCATTAATTTCTACCTCTC+TGG | - | chr3_3:84931486-84931505 | None:intergenic | 30.0% | |
| !!! | GTGTTGTCTTCAATTTTTTC+AGG | - | chr3_3:84931734-84931753 | None:intergenic | 30.0% |
| TATCTTTACCTTCTAATCAC+AGG | + | chr3_3:84932015-84932034 | Msa0479760:intron | 30.0% | |
| ATCTTTACCTTCTAATCACA+GGG | + | chr3_3:84932016-84932035 | Msa0479760:intron | 30.0% | |
| AAGTCTTAGTTACATCAAGT+GGG | - | chr3_3:84932504-84932523 | None:intergenic | 30.0% | |
| GTTTCATGAATTTCATTCAC+AGG | + | chr3_3:84932782-84932801 | Msa0479760:CDS | 30.0% | |
| ! | AATCGAAACTAACCTTTTCA+CGG | - | chr3_3:84933049-84933068 | None:intergenic | 30.0% |
| GCAATCAATCGTAAAAATCA+CGG | - | chr3_3:84933128-84933147 | None:intergenic | 30.0% | |
| !! | TTGGTTGTTTCTAAAATGTG+TGG | - | chr3_3:84933185-84933204 | None:intergenic | 30.0% |
| TGATCAACATGAATTGTGTT+TGG | + | chr3_3:84933602-84933621 | Msa0479760:intron | 30.0% | |
| !! | GTTTGGTGATGTCTAATATT+TGG | + | chr3_3:84933619-84933638 | Msa0479760:intron | 30.0% |
| ! | TTCTTTGCCTTAATCTTTTC+AGG | + | chr3_3:84933644-84933663 | Msa0479760:intron | 30.0% |
| TATCTTGCCTGAAAAGATTA+AGG | - | chr3_3:84933654-84933673 | None:intergenic | 30.0% | |
| AGCATATGAGCAAATAAGTA+GGG | - | chr3_3:84933826-84933845 | None:intergenic | 30.0% | |
| ACTACATCTGACGTTATATT+AGG | + | chr3_3:84934249-84934268 | Msa0479760:three_prime_UTR | 30.0% | |
| CTACATCTGACGTTATATTA+GGG | + | chr3_3:84934250-84934269 | Msa0479760:three_prime_UTR | 30.0% | |
| TTATATTAGGGAGGAAAGTA+AGG | + | chr3_3:84934262-84934281 | Msa0479760:three_prime_UTR | 30.0% | |
| GTAATAGTAGAGAGAAAGGA+TGG | - | chr3_3:84929882-84929901 | None:intergenic | 35.0% | |
| !! | GTTGGTAATAGTAGAGAGAA+AGG | - | chr3_3:84929886-84929905 | None:intergenic | 35.0% |
| AGATATACCTCTAGATCCAA+CGG | - | chr3_3:84930182-84930201 | None:intergenic | 35.0% | |
| CGATTTAGAGATCAATGAGT+TGG | + | chr3_3:84930556-84930575 | Msa0479760:intron | 35.0% | |
| AATAAGCTGAAAACAGCTCA+TGG | + | chr3_3:84930707-84930726 | Msa0479760:intron | 35.0% | |
| GCCACATTTAGTTGAGTATT+GGG | + | chr3_3:84931039-84931058 | Msa0479760:intron | 35.0% | |
| ! | CCACATTTAGTTGAGTATTG+GGG | + | chr3_3:84931040-84931059 | Msa0479760:intron | 35.0% |
| ! | CACCATTGGTAATTACAACT+TGG | + | chr3_3:84931087-84931106 | Msa0479760:intron | 35.0% |
| TGAACTTTACAACAGACAGA+TGG | - | chr3_3:84931123-84931142 | None:intergenic | 35.0% | |
| ATCTGTCTGTTGTAAAGTTC+AGG | + | chr3_3:84931122-84931141 | Msa0479760:intron | 35.0% | |
| TCTGTCTGTTGTAAAGTTCA+GGG | + | chr3_3:84931123-84931142 | Msa0479760:intron | 35.0% | |
| !! | ATTATTTTACCCCTTTTGGC+AGG | + | chr3_3:84931191-84931210 | Msa0479760:intron | 35.0% |
| CTTGGAAGATTATCATCTTG+TGG | + | chr3_3:84931223-84931242 | Msa0479760:CDS | 35.0% | |
| AAAAGCTTGCCCAATTTGAT+AGG | + | chr3_3:84931246-84931265 | Msa0479760:CDS | 35.0% | |
| AAAGCTTGCCCAATTTGATA+GGG | + | chr3_3:84931247-84931266 | Msa0479760:CDS | 35.0% | |
| TATTTAGTCGCTGGAAGATA+TGG | - | chr3_3:84931531-84931550 | None:intergenic | 35.0% | |
| TTAACCAACTCCAGTTTAGT+TGG | + | chr3_3:84931591-84931610 | Msa0479760:intron | 35.0% | |
| TTTACCAACTAAACTGGAGT+TGG | - | chr3_3:84931598-84931617 | None:intergenic | 35.0% | |
| AACAATTTGGTCTAGGGATT+TGG | + | chr3_3:84931697-84931716 | Msa0479760:intron | 35.0% | |
| AAAGTTACCCTGTGATTAGA+AGG | - | chr3_3:84932026-84932045 | None:intergenic | 35.0% | |
| GAAAGTGAGAAAAGAAGTCA+AGG | - | chr3_3:84932165-84932184 | None:intergenic | 35.0% | |
| CAAGTCTTAGTTACATCAAG+TGG | - | chr3_3:84932505-84932524 | None:intergenic | 35.0% | |
| CACTTGATGTAACTAAGACT+TGG | + | chr3_3:84932503-84932522 | Msa0479760:CDS | 35.0% | |
| ATATACACCAGGCACAATAA+TGG | - | chr3_3:84932629-84932648 | None:intergenic | 35.0% | |
| ATGATAAGATGCTTCAAACC+AGG | + | chr3_3:84932656-84932675 | Msa0479760:CDS | 35.0% | |
| ATCAGCATAAGAGAAAATCC+TGG | - | chr3_3:84932677-84932696 | None:intergenic | 35.0% | |
| TGAAATTCATGAAACCCTCA+TGG | - | chr3_3:84932777-84932796 | None:intergenic | 35.0% | |
| GAGAAATTAGCAGTAGGAAT+GGG | - | chr3_3:84933020-84933039 | None:intergenic | 35.0% | |
| AGAGAAATTAGCAGTAGGAA+TGG | - | chr3_3:84933021-84933040 | None:intergenic | 35.0% | |
| TGACAAAGAAGCAGAGAAAT+AGG | + | chr3_3:84933280-84933299 | Msa0479760:intron | 35.0% | |
| ! | ATTTTGTAACAGGAACCTGT+CGG | - | chr3_3:84933575-84933594 | None:intergenic | 35.0% |
| GAGCATATGAGCAAATAAGT+AGG | - | chr3_3:84933827-84933846 | None:intergenic | 35.0% | |
| TTTGCTCATATGCTCTTTGT+TGG | + | chr3_3:84933832-84933851 | Msa0479760:intron | 35.0% | |
| !!! | CTTTGTTGGTTTTACTATGC+AGG | + | chr3_3:84933846-84933865 | Msa0479760:intron | 35.0% |
| AATTTCAACATCTGCAACTC+TGG | - | chr3_3:84933957-84933976 | None:intergenic | 35.0% | |
| ATAGTAGAGAGAAAGGATGG+AGG | - | chr3_3:84929879-84929898 | None:intergenic | 40.0% | |
| CTCTCTACTATTACCAACCA+TGG | + | chr3_3:84929888-84929907 | Msa0479760:exon | 40.0% | |
| GTATACCTTGTATGGATCCA+TGG | - | chr3_3:84929908-84929927 | None:intergenic | 40.0% | |
| CCTTTCTGGACTACAAATTC+CGG | + | chr3_3:84930124-84930143 | Msa0479760:CDS | 40.0% | |
| ! | GATGAGTTGTTGTTCCAAAC+AGG | - | chr3_3:84930154-84930173 | None:intergenic | 40.0% |
| GACATCCATGCATGTGATTA+AGG | + | chr3_3:84930368-84930387 | Msa0479760:intron | 40.0% | |
| AAGAGCCTTAATCACATGCA+TGG | - | chr3_3:84930376-84930395 | None:intergenic | 40.0% | |
| TCAACTAAGCCTACACAAAC+AGG | + | chr3_3:84930784-84930803 | Msa0479760:intron | 40.0% | |
| AGCAATTGAGAGGGTTTACT+TGG | - | chr3_3:84930972-84930991 | None:intergenic | 40.0% | |
| ATACTCAACTAAATGTGGCG+TGG | - | chr3_3:84931038-84931057 | None:intergenic | 40.0% | |
| CGCCACATTTAGTTGAGTAT+TGG | + | chr3_3:84931038-84931057 | Msa0479760:intron | 40.0% | |
| CCCCAATACTCAACTAAATG+TGG | - | chr3_3:84931043-84931062 | None:intergenic | 40.0% | |
| CGCCAAGTTGTAATTACCAA+TGG | - | chr3_3:84931092-84931111 | None:intergenic | 40.0% | |
| TTGCCCAATTTGATAGGGAA+CGG | + | chr3_3:84931252-84931271 | Msa0479760:CDS | 40.0% | |
| GATCCGTTCCCTATCAAATT+GGG | - | chr3_3:84931258-84931277 | None:intergenic | 40.0% | |
| TCTACTGTCATTCATGAACG+TGG | + | chr3_3:84931410-84931429 | Msa0479760:CDS | 40.0% | |
| ATTTCACAGCAAAACCTCGA+GGG | - | chr3_3:84931457-84931476 | None:intergenic | 40.0% | |
| AATTTCACAGCAAAACCTCG+AGG | - | chr3_3:84931458-84931477 | None:intergenic | 40.0% | |
| TGTGAAATTCTACACCAGAG+AGG | + | chr3_3:84931469-84931488 | Msa0479760:CDS | 40.0% | |
| ! | CGGCATTTTACCAACTAAAC+TGG | - | chr3_3:84931604-84931623 | None:intergenic | 40.0% |
| GAAGACAACACATGCATTGT+TGG | + | chr3_3:84931743-84931762 | Msa0479760:intron | 40.0% | |
| ACAAAGGGTTTAGACAATGC+TGG | - | chr3_3:84931776-84931795 | None:intergenic | 40.0% | |
| AAGTAGTTGCAGTTGTAACC+AGG | + | chr3_3:84931906-84931925 | Msa0479760:intron | 40.0% | |
| AAGCAAATACACAAGCATCC+TGG | - | chr3_3:84931927-84931946 | None:intergenic | 40.0% | |
| AAGAGGTGATATGGAACAGT+TGG | + | chr3_3:84931970-84931989 | Msa0479760:intron | 40.0% | |
| ! | CAGGAAAGTTGTTTCCAACA+AGG | - | chr3_3:84932051-84932070 | None:intergenic | 40.0% |
| ! | CGGGATGAATTTTCCAGATA+TGG | + | chr3_3:84932087-84932106 | Msa0479760:CDS | 40.0% |
| ! | TTAAGAGCATGGACCATATC+TGG | - | chr3_3:84932103-84932122 | None:intergenic | 40.0% |
| GAGAACATGTGAAGACTTTC+TGG | - | chr3_3:84932187-84932206 | None:intergenic | 40.0% | |
| !! | TCCTTCCTGTTTGATGATGT+GGG | + | chr3_3:84932205-84932224 | Msa0479760:CDS | 40.0% |
| CCATGTGCCTATAATCTTGT+GGG | - | chr3_3:84932234-84932253 | None:intergenic | 40.0% | |
| TCCATGTGCCTATAATCTTG+TGG | - | chr3_3:84932235-84932254 | None:intergenic | 40.0% | |
| CAAGATTATAGGCACATGGA+TGG | + | chr3_3:84932235-84932254 | Msa0479760:CDS | 40.0% | |
| ! | TATAGGCACATGGATGGTTT+TGG | + | chr3_3:84932241-84932260 | Msa0479760:CDS | 40.0% |
| CACATATTCCCTGATCAACA+AGG | + | chr3_3:84932270-84932289 | Msa0479760:CDS | 40.0% | |
| CAGTGTACGTGAAATTTCAC+TGG | + | chr3_3:84932302-84932321 | Msa0479760:CDS | 40.0% | |
| CAGCAGCAATTGAATCATAC+AGG | - | chr3_3:84932411-84932430 | None:intergenic | 40.0% | |
| CTGTATGATTCAATTGCTGC+TGG | + | chr3_3:84932409-84932428 | Msa0479760:CDS | 40.0% | |
| TGAACAAACAGTTTCCACTC+AGG | - | chr3_3:84932442-84932461 | None:intergenic | 40.0% | |
| TCAAATTTGTCTTCGTGAGC+AGG | - | chr3_3:84932475-84932494 | None:intergenic | 40.0% | |
| CTATGTTCTTGTTCAAGACC+AGG | - | chr3_3:84932564-84932583 | None:intergenic | 40.0% | |
| TGTGCCTGGTGTATATTACT+CGG | + | chr3_3:84932633-84932652 | Msa0479760:CDS | 40.0% | |
| TCATCCGAGTAATATACACC+AGG | - | chr3_3:84932640-84932659 | None:intergenic | 40.0% | |
| !! | TCTCTTATGCTGATTCACAG+AGG | + | chr3_3:84932683-84932702 | Msa0479760:CDS | 40.0% |
| TTTCATTCACAGGGATGAAG+AGG | + | chr3_3:84932792-84932811 | Msa0479760:CDS | 40.0% | |
| !!! | CTTGAGCTCTGCCATTTTAT+AGG | + | chr3_3:84932944-84932963 | Msa0479760:intron | 40.0% |
| AGGTCAATTACTTCCCTTCA+AGG | + | chr3_3:84932964-84932983 | Msa0479760:intron | 40.0% | |
| CATGCAGAGAAATTAGCAGT+AGG | - | chr3_3:84933026-84933045 | None:intergenic | 40.0% | |
| ATCGTAAAAATCACGGCTGA+TGG | - | chr3_3:84933121-84933140 | None:intergenic | 40.0% | |
| CATACATTCTTCCCCAATAC+AGG | - | chr3_3:84933468-84933487 | None:intergenic | 40.0% | |
| TGCTTGAAGTTGTTCTGCTT+TGG | - | chr3_3:84933523-84933542 | None:intergenic | 40.0% | |
| ! | TTTTGTAACAGGAACCTGTC+GGG | - | chr3_3:84933574-84933593 | None:intergenic | 40.0% |
| AAGATAGATTTCTCCGCAGA+TGG | + | chr3_3:84933668-84933687 | Msa0479760:CDS | 40.0% | |
| AGATAGATTTCTCCGCAGAT+GGG | + | chr3_3:84933669-84933688 | Msa0479760:CDS | 40.0% | |
| TTGCATCTCATCTGAACATG+AGG | + | chr3_3:84933893-84933912 | Msa0479760:CDS | 40.0% | |
| AACATGAGGCCTAGCATTTA+AGG | + | chr3_3:84933907-84933926 | Msa0479760:CDS | 40.0% | |
| TCGCAACAACCTTAAATGCT+AGG | - | chr3_3:84933919-84933938 | None:intergenic | 40.0% | |
| CATCTGACGTTATATTAGGG+AGG | + | chr3_3:84934253-84934272 | Msa0479760:three_prime_UTR | 40.0% | |
| CGGTGGAGAAGAAGAAGAAA+TGG | - | chr3_3:84929855-84929874 | None:intergenic | 45.0% | |
| TAGAGAGAAAGGATGGAGGA+CGG | - | chr3_3:84929875-84929894 | None:intergenic | 45.0% | |
| ACCAACCATGGATCCATACA+AGG | + | chr3_3:84929900-84929919 | Msa0479760:exon | 45.0% | |
| ACCTTGTATGGATCCATGGT+TGG | - | chr3_3:84929904-84929923 | None:intergenic | 45.0% | |
| !! | AATTGTAAGCGCTGGATGGA+CGG | - | chr3_3:84930102-84930121 | None:intergenic | 45.0% |
| GAAAGGAGAATTGTAAGCGC+TGG | - | chr3_3:84930110-84930129 | None:intergenic | 45.0% | |
| GCGCTTACAATTCTCCTTTC+TGG | + | chr3_3:84930110-84930129 | Msa0479760:CDS | 45.0% | |
| CCGGAATTTGTAGTCCAGAA+AGG | - | chr3_3:84930127-84930146 | None:intergenic | 45.0% | |
| AACAACTCATCCCTAACCGT+TGG | + | chr3_3:84930163-84930182 | Msa0479760:CDS | 45.0% | |
| ACCTCTAGATCCAACGGTTA+GGG | - | chr3_3:84930176-84930195 | None:intergenic | 45.0% | |
| TACCTCTAGATCCAACGGTT+AGG | - | chr3_3:84930177-84930196 | None:intergenic | 45.0% | |
| CTTATCCCACTATGTGGAGT+CGG | - | chr3_3:84930621-84930640 | None:intergenic | 45.0% | |
| ! | ATAGTGGGATAAGGCTTGGT+TGG | + | chr3_3:84930628-84930647 | Msa0479760:intron | 45.0% |
| ACAGTTAGGCCTGTTTGTGT+AGG | - | chr3_3:84930796-84930815 | None:intergenic | 45.0% | |
| CACACATGCAGCAATTGAGA+GGG | - | chr3_3:84930981-84931000 | None:intergenic | 45.0% | |
| AGAATTGGACCTGCCAAAAG+GGG | - | chr3_3:84931203-84931222 | None:intergenic | 45.0% | |
| GAGAATTGGACCTGCCAAAA+GGG | - | chr3_3:84931204-84931223 | None:intergenic | 45.0% | |
| AGAGAATTGGACCTGCCAAA+AGG | - | chr3_3:84931205-84931224 | None:intergenic | 45.0% | |
| TTTGGCAGGTCCAATTCTCT+TGG | + | chr3_3:84931205-84931224 | Msa0479760:intron | 45.0% | |
| GGATCCGTTCCCTATCAAAT+TGG | - | chr3_3:84931259-84931278 | None:intergenic | 45.0% | |
| GTAGGAAATCTGCACAAGTC+AGG | - | chr3_3:84931352-84931371 | None:intergenic | 45.0% | |
| GTAGAGAAACGCACAATGAC+AGG | - | chr3_3:84931395-84931414 | None:intergenic | 45.0% | |
| CAGTAGCTGTATTTAGTCGC+TGG | - | chr3_3:84931540-84931559 | None:intergenic | 45.0% | |
| CAGGGTAACTTTGACCTTGT+TGG | + | chr3_3:84932034-84932053 | Msa0479760:intron | 45.0% | |
| CCTGTCTTCTTCGTTCATGA+CGG | + | chr3_3:84932067-84932086 | Msa0479760:CDS | 45.0% | |
| CTGTCTTCTTCGTTCATGAC+GGG | + | chr3_3:84932068-84932087 | Msa0479760:CDS | 45.0% | |
| TCTCCAATTCTCCTGGATGT+GGG | - | chr3_3:84932140-84932159 | None:intergenic | 45.0% | |
| TTCTCCAATTCTCCTGGATG+TGG | - | chr3_3:84932141-84932160 | None:intergenic | 45.0% | |
| CAAGGATTCTCCAATTCTCC+TGG | - | chr3_3:84932147-84932166 | None:intergenic | 45.0% | |
| !! | CTCCTTCCTGTTTGATGATG+TGG | + | chr3_3:84932204-84932223 | Msa0479760:CDS | 45.0% |
| ACCCACATCATCAAACAGGA+AGG | - | chr3_3:84932209-84932228 | None:intergenic | 45.0% | |
| TGGGTGTCCCACAAGATTAT+AGG | + | chr3_3:84932224-84932243 | Msa0479760:CDS | 45.0% | |
| CCCACAAGATTATAGGCACA+TGG | + | chr3_3:84932231-84932250 | Msa0479760:CDS | 45.0% | |
| TATTCCCTGATCAACAAGGC+TGG | + | chr3_3:84932274-84932293 | Msa0479760:CDS | 45.0% | |
| ATTCCCTGATCAACAAGGCT+GGG | + | chr3_3:84932275-84932294 | Msa0479760:CDS | 45.0% | |
| !! | TTTCCCAGCCTTGTTGATCA+GGG | - | chr3_3:84932281-84932300 | None:intergenic | 45.0% |
| AGACACTTCACACCACATGT+GGG | - | chr3_3:84932331-84932350 | None:intergenic | 45.0% | |
| ! | ATGTGGTGTGAAGTGTCTGT+TGG | + | chr3_3:84932333-84932352 | Msa0479760:CDS | 45.0% |
| CATACAGGTCTTGAGTAGCA+TGG | - | chr3_3:84932396-84932415 | None:intergenic | 45.0% | |
| TGTAACTAAGACTTGGCCTG+AGG | + | chr3_3:84932510-84932529 | Msa0479760:CDS | 45.0% | |
| ! | TGAAGGGGTATAATGTCCTC+AGG | - | chr3_3:84932529-84932548 | None:intergenic | 45.0% |
| ! | ATTCACAGAGGCACAGACTT+GGG | + | chr3_3:84932695-84932714 | Msa0479760:CDS | 45.0% |
| TTGTTGTGGTGAGCACACTT+GGG | - | chr3_3:84932751-84932770 | None:intergenic | 45.0% | |
| ATTGTTGTGGTGAGCACACT+TGG | - | chr3_3:84932752-84932771 | None:intergenic | 45.0% | |
| TCACCACAACAATCACCATG+AGG | + | chr3_3:84932759-84932778 | Msa0479760:CDS | 45.0% | |
| CACCACAACAATCACCATGA+GGG | + | chr3_3:84932760-84932779 | Msa0479760:CDS | 45.0% | |
| AACCCTCATGGTGATTGTTG+TGG | - | chr3_3:84932765-84932784 | None:intergenic | 45.0% | |
| GAACAGGATCATGCCTTGAA+GGG | - | chr3_3:84932980-84932999 | None:intergenic | 45.0% | |
| TCCTGTTCGTCATGCAGAAA+AGG | + | chr3_3:84932992-84933011 | Msa0479760:CDS | 45.0% | |
| ! | ACCTTTTCTGCATGACGAAC+AGG | - | chr3_3:84932996-84933015 | None:intergenic | 45.0% |
| TTTCTCTGCATGCCGTGAAA+AGG | + | chr3_3:84933034-84933053 | Msa0479760:CDS | 45.0% | |
| GAGAAATAGGTCCACTACCT+TGG | + | chr3_3:84933293-84933312 | Msa0479760:intron | 45.0% | |
| ! | ATAAAGCATCCACCCATCTG+CGG | - | chr3_3:84933684-84933703 | None:intergenic | 45.0% |
| AGTATGAGATCCAGATGCTG+CGG | - | chr3_3:84933732-84933751 | None:intergenic | 45.0% | |
| !! | GGAGAATTGTAAGCGCTGGA+TGG | - | chr3_3:84930106-84930125 | None:intergenic | 50.0% |
| CAAATTCCGGTGCACCTGTT+TGG | + | chr3_3:84930137-84930156 | Msa0479760:CDS | 50.0% | |
| GTTGTTCCAAACAGGTGCAC+CGG | - | chr3_3:84930146-84930165 | None:intergenic | 50.0% | |
| TCCCTAACCGTTGGATCTAG+AGG | + | chr3_3:84930172-84930191 | Msa0479760:CDS | 50.0% | |
| ACTATGTGGAGTCGGCTACA+TGG | - | chr3_3:84930613-84930632 | None:intergenic | 50.0% | |
| ! | ATGTAGCCGACTCCACATAG+TGG | + | chr3_3:84930612-84930631 | Msa0479760:intron | 50.0% |
| ! | TGTAGCCGACTCCACATAGT+GGG | + | chr3_3:84930613-84930632 | Msa0479760:intron | 50.0% |
| ! | CGACTCCACATAGTGGGATA+AGG | + | chr3_3:84930619-84930638 | Msa0479760:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTATG+TGG | - | chr3_3:84930627-84930646 | None:intergenic | 50.0% |
| ! | CCACATAGTGGGATAAGGCT+TGG | + | chr3_3:84930624-84930643 | Msa0479760:intron | 50.0% |
| GCACACATGCAGCAATTGAG+AGG | - | chr3_3:84930982-84931001 | None:intergenic | 50.0% | |
| TGGCATGGACAACACGTTCT+GGG | - | chr3_3:84931280-84931299 | None:intergenic | 50.0% | |
| AGAACGTGTTGTCCATGCCA+GGG | + | chr3_3:84931280-84931299 | Msa0479760:CDS | 50.0% | |
| ATGACAGGTGTCTGAACTCC+AGG | - | chr3_3:84931380-84931399 | None:intergenic | 50.0% | |
| GAGGGTCTCTCAAGGTTTCA+GGG | - | chr3_3:84931439-84931458 | None:intergenic | 50.0% | |
| AAAACCTCGAGGGTCTCTCA+AGG | - | chr3_3:84931447-84931466 | None:intergenic | 50.0% | |
| CCGTCATGAACGAAGAAGAC+AGG | - | chr3_3:84932070-84932089 | None:intergenic | 50.0% | |
| TGGGGTTGGGTTTAAGAGCA+TGG | - | chr3_3:84932114-84932133 | None:intergenic | 50.0% | |
| TTCTCCTGGATGTGGGACTT+GGG | - | chr3_3:84932133-84932152 | None:intergenic | 50.0% | |
| ATTCTCCTGGATGTGGGACT+TGG | - | chr3_3:84932134-84932153 | None:intergenic | 50.0% | |
| AGTCCCACATCCAGGAGAAT+TGG | + | chr3_3:84932134-84932153 | Msa0479760:CDS | 50.0% | |
| GGACACCCACATCATCAAAC+AGG | - | chr3_3:84932213-84932232 | None:intergenic | 50.0% | |
| !! | CTTTCCCAGCCTTGTTGATC+AGG | - | chr3_3:84932282-84932301 | None:intergenic | 50.0% |
| TTTCACTGGAAGCCCACATG+TGG | + | chr3_3:84932316-84932335 | Msa0479760:CDS | 50.0% | |
| CAGACACTTCACACCACATG+TGG | - | chr3_3:84932332-84932351 | None:intergenic | 50.0% | |
| ! | TGGTGTGAAGTGTCTGTTGG+AGG | + | chr3_3:84932336-84932355 | Msa0479760:CDS | 50.0% |
| ! | GAAGTGTCTGTTGGAGGAAG+AGG | + | chr3_3:84932342-84932361 | Msa0479760:CDS | 50.0% |
| GTTGGAGGAAGAGGCCATTA+AGG | + | chr3_3:84932351-84932370 | Msa0479760:CDS | 50.0% | |
| GAGGAAGAGGCCATTAAGGT+GGG | + | chr3_3:84932355-84932374 | Msa0479760:CDS | 50.0% | |
| GTTGGATCCTCCCACCTTAA+TGG | - | chr3_3:84932368-84932387 | None:intergenic | 50.0% | |
| TTGAGTAGCATGGCTGTGGT+TGG | - | chr3_3:84932386-84932405 | None:intergenic | 50.0% | |
| CTGCTGGTAACTATCCTGAG+TGG | + | chr3_3:84932425-84932444 | Msa0479760:CDS | 50.0% | |
| ATTATACCCCTTCAGCCCGT+AGG | + | chr3_3:84932535-84932554 | Msa0479760:CDS | 50.0% | |
| TGTCCTGCCATTATTGTGCC+TGG | + | chr3_3:84932619-84932638 | Msa0479760:CDS | 50.0% | |
| ACACCAGGCACAATAATGGC+AGG | - | chr3_3:84932625-84932644 | None:intergenic | 50.0% | |
| ! | GATTCACAGAGGCACAGACT+TGG | + | chr3_3:84932694-84932713 | Msa0479760:CDS | 50.0% |
| GCGGGAAGTTGCAGATAGTT+TGG | - | chr3_3:84932721-84932740 | None:intergenic | 50.0% | |
| !! | AGCACACTTGGGAGCATTAG+CGG | - | chr3_3:84932740-84932759 | None:intergenic | 50.0% |
| CGAACAGGATCATGCCTTGA+AGG | - | chr3_3:84932981-84933000 | None:intergenic | 50.0% | |
| CAGAACAACTTCAAGCAGCC+TGG | + | chr3_3:84933526-84933545 | Msa0479760:CDS | 50.0% | |
| TGGAGAGCGATACCGATCTT+GGG | + | chr3_3:84933546-84933565 | Msa0479760:CDS | 50.0% | |
| TAGATTTCTCCGCAGATGGG+TGG | + | chr3_3:84933672-84933691 | Msa0479760:CDS | 50.0% | |
| CCAGATGCTGCGGATTTCAT+GGG | - | chr3_3:84933722-84933741 | None:intergenic | 50.0% | |
| TCCAGATGCTGCGGATTTCA+TGG | - | chr3_3:84933723-84933742 | None:intergenic | 50.0% | |
| GCAGCATCTGGATCTCATAC+TGG | + | chr3_3:84933731-84933750 | Msa0479760:CDS | 50.0% | |
| ! | CTGGATCTCATACTGGTCTC+AGG | + | chr3_3:84933738-84933757 | Msa0479760:CDS | 50.0% |
| ATGCAGGCTGATCGTTCTCT+TGG | + | chr3_3:84933862-84933881 | Msa0479760:intron | 50.0% | |
| AGCTCAACGAGTCACGTACA+TGG | - | chr3_3:84934064-84934083 | None:intergenic | 50.0% | |
| AGAGAAAGGATGGAGGACGG+TGG | - | chr3_3:84929872-84929891 | None:intergenic | 55.0% | |
| CTGGCATGGACAACACGTTC+TGG | - | chr3_3:84931281-84931300 | None:intergenic | 55.0% | |
| CAGAACGTGTTGTCCATGCC+AGG | + | chr3_3:84931279-84931298 | Msa0479760:CDS | 55.0% | |
| GAACGTGTTGTCCATGCCAG+GGG | + | chr3_3:84931281-84931300 | Msa0479760:CDS | 55.0% | |
| GCAGATTTCCTACGAGCTCC+TGG | + | chr3_3:84931359-84931378 | Msa0479760:CDS | 55.0% | |
| TCTGAACTCCAGGAGCTCGT+AGG | - | chr3_3:84931370-84931389 | None:intergenic | 55.0% | |
| CGAGGGTCTCTCAAGGTTTC+AGG | - | chr3_3:84931440-84931459 | None:intergenic | 55.0% | |
| GAAACCTTGAGAGACCCTCG+AGG | + | chr3_3:84931440-84931459 | Msa0479760:CDS | 55.0% | |
| TGGATGTGGGACTTGGGGTT+GGG | - | chr3_3:84932127-84932146 | None:intergenic | 55.0% | |
| TCTCCTGGATGTGGGACTTG+GGG | - | chr3_3:84932132-84932151 | None:intergenic | 55.0% | |
| GGAGGAAGAGGCCATTAAGG+TGG | + | chr3_3:84932354-84932373 | Msa0479760:CDS | 55.0% | |
| GAAGAGGCCATTAAGGTGGG+AGG | + | chr3_3:84932358-84932377 | Msa0479760:CDS | 55.0% | |
| GGTCTTGAGTAGCATGGCTG+TGG | - | chr3_3:84932390-84932409 | None:intergenic | 55.0% | |
| TTCAAGACCAGGCGACCTAC+GGG | - | chr3_3:84932553-84932572 | None:intergenic | 55.0% | |
| GTTCAAGACCAGGCGACCTA+CGG | - | chr3_3:84932554-84932573 | None:intergenic | 55.0% | |
| !! | GCACACTTGGGAGCATTAGC+GGG | - | chr3_3:84932739-84932758 | None:intergenic | 55.0% |
| CAAGATCGGTATCGCTCTCC+AGG | - | chr3_3:84933547-84933566 | None:intergenic | 55.0% | |
| CTGGAGAGCGATACCGATCT+TGG | + | chr3_3:84933545-84933564 | Msa0479760:CDS | 55.0% | |
| GGATTTCATGGGTGACGCGT+GGG | - | chr3_3:84933711-84933730 | None:intergenic | 55.0% | |
| CCCATGAAATCCGCAGCATC+TGG | + | chr3_3:84933719-84933738 | Msa0479760:CDS | 55.0% | |
| TTGCACTTGCTCCCCTGGCA+TGG | - | chr3_3:84931295-84931314 | None:intergenic | 60.0% | |
| TGCCAGGGGAGCAAGTGCAA+AGG | + | chr3_3:84931295-84931314 | Msa0479760:CDS | 60.0% | |
| GCCAGGGGAGCAAGTGCAAA+GGG | + | chr3_3:84931296-84931315 | Msa0479760:CDS | 60.0% | |
| ACCCTTTGCACTTGCTCCCC+TGG | - | chr3_3:84931300-84931319 | None:intergenic | 60.0% | |
| CTGGATGTGGGACTTGGGGT+TGG | - | chr3_3:84932128-84932147 | None:intergenic | 60.0% | |
| CAACCCCAAGTCCCACATCC+AGG | + | chr3_3:84932126-84932145 | Msa0479760:CDS | 60.0% | |
| ACCTGTCGGGTGCCCAAGAT+CGG | - | chr3_3:84933561-84933580 | None:intergenic | 60.0% | |
| TTCATGGGTGACGCGTGGGT+CGG | - | chr3_3:84933707-84933726 | None:intergenic | 60.0% | |
| CGGATTTCATGGGTGACGCG+TGG | - | chr3_3:84933712-84933731 | None:intergenic | 60.0% | |
| ! | AGGCGACCTACGGGCTGAAG+GGG | - | chr3_3:84932544-84932563 | None:intergenic | 65.0% |
| ! | CAGGCGACCTACGGGCTGAA+GGG | - | chr3_3:84932545-84932564 | None:intergenic | 65.0% |
| ACCGATCTTGGGCACCCGAC+AGG | + | chr3_3:84933557-84933576 | Msa0479760:CDS | 65.0% | |
| ! | CCAGGCGACCTACGGGCTGA+AGG | - | chr3_3:84932546-84932565 | None:intergenic | 70.0% |
| CCTTCAGCCCGTAGGTCGCC+TGG | + | chr3_3:84932543-84932562 | Msa0479760:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 84929716 | 84934305 | 84929716 | ID=Msa0479760;Name=Msa0479760 |
| chr3_3 | mRNA | 84929716 | 84934305 | 84929716 | ID=Msa0479760-mRNA-1;Parent=Msa0479760;Name=Msa0479760-mRNA-1;_AED=0.09;_eAED=0.09;_QI=191|1|1|1|1|1|8|378|492 |
| chr3_3 | exon | 84929716 | 84929921 | 84929716 | ID=Msa0479760-mRNA-1:exon:24176;Parent=Msa0479760-mRNA-1 |
| chr3_3 | exon | 84930097 | 84930193 | 84930097 | ID=Msa0479760-mRNA-1:exon:24177;Parent=Msa0479760-mRNA-1 |
| chr3_3 | exon | 84931213 | 84931490 | 84931213 | ID=Msa0479760-mRNA-1:exon:24178;Parent=Msa0479760-mRNA-1 |
| chr3_3 | exon | 84932037 | 84932813 | 84932037 | ID=Msa0479760-mRNA-1:exon:24179;Parent=Msa0479760-mRNA-1 |
| chr3_3 | exon | 84932966 | 84933055 | 84932966 | ID=Msa0479760-mRNA-1:exon:24180;Parent=Msa0479760-mRNA-1 |
| chr3_3 | exon | 84933511 | 84933578 | 84933511 | ID=Msa0479760-mRNA-1:exon:24181;Parent=Msa0479760-mRNA-1 |
| chr3_3 | exon | 84933666 | 84933759 | 84933666 | ID=Msa0479760-mRNA-1:exon:24182;Parent=Msa0479760-mRNA-1 |
| chr3_3 | exon | 84933868 | 84934305 | 84933868 | ID=Msa0479760-mRNA-1:exon:24183;Parent=Msa0479760-mRNA-1 |
| chr3_3 | five_prime_UTR | 84929716 | 84929906 | 84929716 | ID=Msa0479760-mRNA-1:five_prime_utr;Parent=Msa0479760-mRNA-1 |
| chr3_3 | CDS | 84929907 | 84929921 | 84929907 | ID=Msa0479760-mRNA-1:cds;Parent=Msa0479760-mRNA-1 |
| chr3_3 | CDS | 84930097 | 84930193 | 84930097 | ID=Msa0479760-mRNA-1:cds;Parent=Msa0479760-mRNA-1 |
| chr3_3 | CDS | 84931213 | 84931490 | 84931213 | ID=Msa0479760-mRNA-1:cds;Parent=Msa0479760-mRNA-1 |
| chr3_3 | CDS | 84932037 | 84932813 | 84932037 | ID=Msa0479760-mRNA-1:cds;Parent=Msa0479760-mRNA-1 |
| chr3_3 | CDS | 84932966 | 84933055 | 84932966 | ID=Msa0479760-mRNA-1:cds;Parent=Msa0479760-mRNA-1 |
| chr3_3 | CDS | 84933511 | 84933578 | 84933511 | ID=Msa0479760-mRNA-1:cds;Parent=Msa0479760-mRNA-1 |
| chr3_3 | CDS | 84933666 | 84933759 | 84933666 | ID=Msa0479760-mRNA-1:cds;Parent=Msa0479760-mRNA-1 |
| chr3_3 | CDS | 84933868 | 84933927 | 84933868 | ID=Msa0479760-mRNA-1:cds;Parent=Msa0479760-mRNA-1 |
| chr3_3 | three_prime_UTR | 84933928 | 84934305 | 84933928 | ID=Msa0479760-mRNA-1:three_prime_utr;Parent=Msa0479760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
