AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0883800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0883800 MtrunA17_Chr6g0463891 93.357 286 19 0 1 286 208 493 0.0 531
Msa0883800 MtrunA17_Chr5g0416741 80.351 285 54 2 1 284 207 490 1.36e-158 453
Msa0883800 MtrunA17_Chr5g0416821 71.080 287 65 5 1 284 209 480 2.10e-142 412
Msa0883800 MtrunA17_Chr7g0231631 73.723 274 56 3 12 284 8 266 5.34e-135 385
Msa0883800 MtrunA17_Chr1g0165701 65.614 285 95 3 1 284 208 490 1.13e-129 380
Msa0883800 MtrunA17_Chr8g0355221 64.460 287 98 4 1 284 208 493 4.51e-128 376
Msa0883800 MtrunA17_Chr5g0401851 64.912 285 95 3 1 281 204 487 7.15e-127 372
Msa0883800 MtrunA17_Chr7g0243951 55.124 283 125 1 7 287 211 493 5.81e-109 327
Msa0883800 MtrunA17_Chr7g0243931 53.025 281 129 2 7 284 217 497 7.19e-106 319
Msa0883800 MtrunA17_Chr4g0060511 54.448 281 125 2 7 284 214 494 2.17e-104 315
Msa0883800 MtrunA17_Chr7g0243851 53.521 284 129 2 7 287 169 452 3.21e-104 313
Msa0883800 MtrunA17_Chr7g0243871 53.684 285 123 2 1 284 203 479 9.19e-102 308
Msa0883800 MtrunA17_Chr7g0243861 55.036 278 122 2 7 281 214 491 9.33e-102 308
Msa0883800 MtrunA17_Chr7g0243771 52.249 289 135 2 3 290 202 488 1.81e-99 302
Msa0883800 MtrunA17_Chr7g0243631 52.448 286 133 3 2 284 208 493 5.43e-99 301
Msa0883800 MtrunA17_Chr7g0243801 51.903 289 136 2 3 290 203 489 2.68e-98 299
Msa0883800 MtrunA17_Chr7g0243681 49.827 289 139 4 1 287 205 489 2.42e-96 294
Msa0883800 MtrunA17_Chr7g0243781 51.389 288 130 4 3 287 205 485 2.04e-94 289
Msa0883800 MtrunA17_Chr7g0235051 52.941 272 126 2 7 276 181 452 3.47e-94 288
Msa0883800 MtrunA17_Chr7g0243711 51.601 281 127 4 6 284 50 323 2.16e-93 281
Msa0883800 MtrunA17_Chr4g0044521 47.985 273 137 4 11 280 199 469 3.69e-82 257
Msa0883800 MtrunA17_Chr4g0044511 47.122 278 139 4 5 279 234 506 1.59e-80 254
Msa0883800 MtrunA17_Chr7g0243761 47.552 286 119 4 1 284 205 461 2.14e-79 250
Msa0883800 MtrunA17_Chr7g0243611 54.751 221 98 2 11 229 76 296 4.72e-79 243
Msa0883800 MtrunA17_Chr4g0044501 46.953 279 139 5 7 285 214 483 1.25e-76 243
Msa0883800 MtrunA17_Chr7g0243911 57.005 207 84 2 59 260 7 213 7.64e-75 230
Msa0883800 MtrunA17_Chr8g0366391 44.523 283 149 4 4 285 210 485 1.28e-72 233
Msa0883800 MtrunA17_Chr4g0066281 43.643 291 159 3 1 287 187 476 5.47e-72 231
Msa0883800 MtrunA17_Chr4g0066151 42.466 292 159 3 1 284 196 486 1.39e-71 230
Msa0883800 MtrunA17_Chr4g0011051 44.803 279 145 6 11 283 218 493 2.92e-71 229
Msa0883800 MtrunA17_Chr5g0419771 45.105 286 148 5 2 281 234 516 5.47e-71 229
Msa0883800 MtrunA17_Chr7g0243811 54.808 208 86 3 3 209 180 380 1.22e-70 225
Msa0883800 MtrunA17_Chr7g0265051 45.956 272 139 6 11 277 216 484 1.27e-70 228
Msa0883800 MtrunA17_Chr7g0265101 45.788 273 139 6 11 277 217 486 3.03e-70 227
Msa0883800 MtrunA17_Chr4g0066201 40.972 288 165 3 1 284 195 481 1.62e-69 225
Msa0883800 MtrunA17_Chr4g0066221 41.356 295 164 3 1 287 197 490 2.46e-69 224
Msa0883800 MtrunA17_Chr7g0275681 45.324 278 142 4 4 277 209 480 2.71e-69 224
Msa0883800 MtrunA17_Chr4g0066261 43.617 282 151 4 10 284 208 488 2.92e-69 224
Msa0883800 MtrunA17_Chr7g0265151 44.366 284 137 7 11 282 212 486 5.45e-69 223
Msa0883800 MtrunA17_Chr1g0179901 44.792 288 149 6 4 284 216 500 8.93e-69 223
Msa0883800 MtrunA17_Chr4g0066171 41.219 279 159 3 10 284 206 483 9.41e-69 223
Msa0883800 MtrunA17_Chr6g0463861 41.549 284 155 5 10 284 199 480 1.01e-68 223
Msa0883800 MtrunA17_Chr4g0044481 54.680 203 87 4 10 211 206 404 2.05e-66 215
Msa0883800 MtrunA17_Chr4g0066131 40.138 289 164 3 1 281 191 478 1.30e-65 214
Msa0883800 MtrunA17_Chr7g0218311 42.069 290 157 4 6 287 207 493 2.10e-65 214
Msa0883800 MtrunA17_Chr5g0428081 41.724 290 159 4 6 287 202 489 2.37e-65 214
Msa0883800 MtrunA17_Chr7g0265041 45.620 274 140 5 10 277 218 488 4.96e-65 213
Msa0883800 MtrunA17_Chr8g0374971 41.071 280 156 3 10 281 206 484 8.41e-65 213
Msa0883800 MtrunA17_Chr8g0374901 38.966 290 162 4 6 284 200 485 2.20e-63 209
Msa0883800 MtrunA17_Chr6g0463851 40.845 284 151 6 7 278 205 483 2.37e-62 206
Msa0883800 MtrunA17_Chr2g0294921 41.946 298 157 6 1 287 348 640 7.50e-62 208
Msa0883800 MtrunA17_Chr5g0410941 39.655 290 165 4 6 287 212 499 1.53e-61 204
Msa0883800 MtrunA17_Chr7g0265111 46.209 277 138 6 11 279 244 517 3.39e-61 204
Msa0883800 MtrunA17_Chr5g0419761 43.728 279 146 7 11 283 216 489 5.26e-61 203
Msa0883800 MtrunA17_Chr8g0374941 39.860 286 163 3 7 284 1140 1424 6.71e-61 211
Msa0883800 MtrunA17_Chr8g0374941 38.550 262 152 3 7 260 202 462 5.66e-54 191
Msa0883800 MtrunA17_Chr8g0374941 39.847 261 145 4 7 259 667 923 1.80e-50 181
Msa0883800 MtrunA17_Chr4g0014061 40.714 280 148 6 11 280 204 475 2.52e-60 201
Msa0883800 MtrunA17_Chr8g0374931 39.322 295 169 4 1 287 199 491 1.03e-59 199
Msa0883800 MtrunA17_Chr8g0350881 38.869 283 164 3 10 284 206 487 1.08e-59 199
Msa0883800 MtrunA17_Chr2g0294931 40.210 286 161 4 1 278 199 482 2.42e-58 196
Msa0883800 MtrunA17_Chr7g0265141 41.758 273 148 7 11 276 216 484 7.13e-56 189
Msa0883800 MtrunA17_Chr2g0294941 37.079 267 160 4 1 260 97 362 1.63e-52 177
Msa0883800 MtrunA17_Chr8g0357361 47.264 201 101 4 10 210 60 255 4.32e-52 173
Msa0883800 MtrunA17_Chr7g0232411 34.982 283 148 8 13 280 207 468 1.65e-43 156
Msa0883800 MtrunA17_Chr7g0232391 35.461 282 142 9 13 279 207 463 7.39e-43 154
Msa0883800 MtrunA17_Chr7g0232331 35.094 265 132 8 13 260 207 448 6.46e-41 149
Msa0883800 MtrunA17_Chr8g0361411 34.066 273 165 5 10 281 199 457 3.77e-40 147
Msa0883800 MtrunA17_Chr7g0232341 33.566 286 149 9 13 280 207 469 7.19e-40 146
Msa0883800 MtrunA17_Chr8g0339601 34.892 278 137 10 9 265 64 318 1.26e-38 140
Msa0883800 MtrunA17_Chr2g0307961 32.721 272 162 8 8 277 216 468 2.37e-38 142
Msa0883800 MtrunA17_Chr8g0382021 32.491 277 161 7 11 277 228 488 3.77e-37 139
Msa0883800 MtrunA17_Chr5g0440421 30.961 281 170 5 8 277 222 489 5.29e-37 139
Msa0883800 MtrunA17_Chr8g0339451 32.982 285 147 8 9 272 197 458 7.80e-37 138
Msa0883800 MtrunA17_Chr8g0369341 32.270 282 159 10 7 280 214 471 4.11e-36 136
Msa0883800 MtrunA17_Chr1g0153451 32.867 286 154 9 13 283 207 469 5.03e-36 135
Msa0883800 MtrunA17_Chr8g0334861 33.214 280 146 9 13 274 204 460 6.01e-36 135
Msa0883800 MtrunA17_Chr7g0217881 32.609 276 166 8 4 277 204 461 7.75e-36 135
Msa0883800 MtrunA17_Chr8g0339461 32.616 279 146 8 8 266 204 460 8.16e-36 135
Msa0883800 MtrunA17_Chr6g0454141 32.491 277 165 8 4 277 222 479 1.21e-35 135
Msa0883800 MtrunA17_Chr8g0334851 33.212 274 138 9 13 266 210 458 1.58e-35 134
Msa0883800 MtrunA17_Chr8g0370941 32.319 263 131 5 36 270 238 481 1.94e-35 135
Msa0883800 MtrunA17_Chr6g0454151 32.453 265 159 8 15 277 231 477 3.14e-35 134
Msa0883800 MtrunA17_Chr6g0454271 34.413 247 142 8 40 284 64 292 4.12e-35 129
Msa0883800 MtrunA17_Chr2g0329111 34.454 238 133 5 11 241 215 436 4.42e-35 133
Msa0883800 MtrunA17_Chr7g0275511 33.704 270 142 9 13 266 216 464 5.06e-35 133
Msa0883800 MtrunA17_Chr6g0462551 32.601 273 148 10 10 270 209 457 1.31e-34 132
Msa0883800 MtrunA17_Chr1g0153461 35.242 227 122 5 70 283 4 218 1.99e-34 125
Msa0883800 MtrunA17_Chr8g0336691 33.333 279 145 9 13 273 1120 1375 2.22e-34 134
Msa0883800 MtrunA17_Chr8g0336691 32.404 287 153 9 13 281 214 477 4.45e-33 130
Msa0883800 MtrunA17_Chr8g0336691 33.453 278 142 10 9 281 677 916 1.53e-30 122
Msa0883800 MtrunA17_Chr4g0066141 35.681 213 120 2 89 284 146 358 2.34e-34 129
Msa0883800 MtrunA17_Chr6g0459311 32.841 271 146 6 13 270 217 464 2.44e-34 131
Msa0883800 MtrunA17_Chr8g0336651 35.106 282 138 10 13 273 982 1239 3.28e-34 133
Msa0883800 MtrunA17_Chr8g0336651 31.734 271 144 7 13 281 547 778 9.59e-31 123
Msa0883800 MtrunA17_Chr8g0336651 31.786 280 146 9 13 273 207 460 7.08e-29 117
Msa0883800 MtrunA17_Chr3g0098111 30.714 280 166 9 9 279 211 471 3.30e-34 131
Msa0883800 MtrunA17_Chr8g0339441 38.028 213 104 6 70 266 218 418 1.34e-33 129
Msa0883800 MtrunA17_Chr6g0449931 32.740 281 158 7 13 280 208 470 1.92e-33 129
Msa0883800 MtrunA17_Chr6g0486251 32.472 271 147 6 13 270 210 457 2.07e-33 128
Msa0883800 MtrunA17_Chr6g0486201 32.472 271 147 6 13 270 210 457 2.07e-33 128
Msa0883800 MtrunA17_Chr8g0335161 37.778 225 119 6 58 270 244 459 3.67e-33 128
Msa0883800 MtrunA17_Chr6g0454261 30.142 282 177 8 4 283 222 485 4.07e-33 128
Msa0883800 MtrunA17_Chr5g0412111 31.769 277 169 6 4 279 206 463 4.50e-33 127
Msa0883800 MtrunA17_Chr8g0335141 32.867 286 147 9 13 280 213 471 5.02e-33 127
Msa0883800 MtrunA17_Chr7g0232401 31.690 284 153 8 13 279 210 469 6.42e-33 127
Msa0883800 MtrunA17_Chr3g0122001 34.298 242 145 4 41 277 720 952 6.68e-33 129
Msa0883800 MtrunA17_Chr3g0122001 30.333 300 187 7 41 331 240 526 7.05e-30 120
Msa0883800 MtrunA17_Chr6g0454291 31.884 276 162 9 7 277 222 476 7.07e-33 127
Msa0883800 MtrunA17_Chr5g0412101 31.522 276 166 7 8 279 216 472 9.13e-33 127
Msa0883800 MtrunA17_Chr1g0207971 30.496 282 164 10 9 284 203 458 9.42e-33 126
Msa0883800 MtrunA17_Chr3g0079731 31.034 290 155 8 9 272 208 478 1.18e-32 127
Msa0883800 MtrunA17_Chr8g0373301 36.364 220 117 5 71 279 261 468 1.37e-32 126
Msa0883800 MtrunA17_Chr6g0452771 31.541 279 171 8 1 277 219 479 1.40e-32 126
Msa0883800 MtrunA17_Chr8g0347281 32.609 276 147 9 13 273 217 468 1.45e-32 126
Msa0883800 MtrunA17_Chr3g0121991 34.468 235 140 4 41 270 313 538 1.55e-32 127
Msa0883800 MtrunA17_Chr5g0448521 30.686 277 172 6 10 275 198 465 1.57e-32 126
Msa0883800 MtrunA17_Chr5g0442521 32.270 282 161 8 10 275 206 473 1.62e-32 126
Msa0883800 MtrunA17_Chr5g0403641 32.155 283 157 9 13 276 235 501 1.85e-32 126
Msa0883800 MtrunA17_Chr5g0442561 31.884 276 162 6 13 275 208 470 1.95e-32 126
Msa0883800 MtrunA17_Chr7g0243731 66.234 77 26 0 134 210 1 77 2.05e-32 116
Msa0883800 MtrunA17_Chr2g0278711 29.710 276 178 5 8 281 219 480 2.06e-32 126
Msa0883800 MtrunA17_Chr6g0462571 32.967 273 144 9 10 270 209 454 2.10e-32 126
Msa0883800 MtrunA17_Chr6g0462531 36.150 213 116 5 64 270 259 457 2.74e-32 125
Msa0883800 MtrunA17_Chr5g0412131 31.429 280 169 6 4 279 211 471 3.31e-32 125
Msa0883800 MtrunA17_Chr8g0339631 32.534 292 152 11 9 280 205 471 4.22e-32 125
Msa0883800 MtrunA17_Chr7g0249931 31.852 270 150 10 17 277 239 483 4.51e-32 125
Msa0883800 MtrunA17_Chr1g0159551 31.047 277 163 9 11 277 201 459 4.75e-32 125
Msa0883800 MtrunA17_Chr8g0336741 33.574 277 145 10 13 273 214 467 5.14e-32 125
Msa0883800 MtrunA17_Chr8g0336731 32.374 278 149 8 13 274 233 487 5.85e-32 125
Msa0883800 MtrunA17_Chr1g0173121 30.686 277 163 8 11 277 205 462 7.34e-32 124
Msa0883800 MtrunA17_Chr6g0462541 35.071 211 117 5 66 270 260 456 8.01e-32 124
Msa0883800 MtrunA17_Chr1g0207951 32.218 239 143 6 40 277 888 1108 8.47e-32 126
Msa0883800 MtrunA17_Chr1g0207951 28.044 271 174 6 9 278 321 571 2.44e-28 116
Msa0883800 MtrunA17_Chr6g0454201 32.083 240 146 5 39 277 257 480 9.32e-32 124
Msa0883800 MtrunA17_Chr6g0454331 30.797 276 171 8 10 283 227 484 9.89e-32 124
Msa0883800 MtrunA17_Chr8g0380531 32.836 268 158 7 15 278 209 458 1.56e-31 123
Msa0883800 MtrunA17_Chr6g0454401 30.741 270 167 8 10 277 229 480 1.74e-31 123
Msa0883800 MtrunA17_Chr5g0423981 30.882 272 164 9 10 277 193 444 1.79e-31 123
Msa0883800 MtrunA17_Chr1g0161351 30.800 250 148 6 40 281 269 501 2.62e-31 123
Msa0883800 MtrunA17_Chr7g0250001 31.250 240 146 6 40 277 225 447 4.18e-31 122
Msa0883800 MtrunA17_Chr8g0347271 31.636 275 151 8 13 273 218 469 4.56e-31 122
Msa0883800 MtrunA17_Chr6g0454221 32.365 241 143 7 39 276 6 229 5.37e-31 119
Msa0883800 MtrunA17_Chr6g0462521 35.514 214 116 6 64 270 245 443 5.94e-31 122
Msa0883800 MtrunA17_Chr8g0361371 30.224 268 141 7 13 256 212 457 6.33e-31 122
Msa0883800 MtrunA17_Chr6g0454211 30.797 276 171 8 10 283 515 772 7.77e-31 123
Msa0883800 MtrunA17_Chr6g0454211 27.746 173 90 6 10 181 98 236 1.97e-13 71.2
Msa0883800 MtrunA17_Chr1g0207861 29.839 248 149 6 40 279 240 470 8.19e-31 121
Msa0883800 MtrunA17_Chr5g0420801 29.537 281 167 9 7 280 205 461 1.57e-30 120
Msa0883800 MtrunA17_Chr6g0464881 33.333 267 150 9 17 277 210 454 1.71e-30 120
Msa0883800 MtrunA17_Chr8g0336331 31.955 266 160 8 15 277 229 476 3.00e-30 120
Msa0883800 MtrunA17_Chr6g0454361 30.483 269 169 7 10 277 229 480 3.02e-30 120
Msa0883800 MtrunA17_Chr6g0454181 30.705 241 148 6 39 277 256 479 3.24e-30 120
Msa0883800 MtrunA17_Chr1g0207831 30.702 228 136 5 58 278 252 464 3.41e-30 120
Msa0883800 MtrunA17_Chr5g0442541 32.414 290 148 11 10 275 198 463 4.37e-30 119
Msa0883800 MtrunA17_Chr8g0359821 30.072 276 173 8 10 283 226 483 4.53e-30 119
Msa0883800 MtrunA17_Chr3g0078841 33.471 242 141 8 39 277 253 477 4.77e-30 119
Msa0883800 MtrunA17_Chr1g0207931 28.169 284 176 8 8 278 230 498 6.87e-30 119
Msa0883800 MtrunA17_Chr6g0464841 32.342 269 150 8 17 277 210 454 7.13e-30 119
Msa0883800 MtrunA17_Chr5g0442491 32.143 280 156 8 13 275 210 472 7.45e-30 119
Msa0883800 MtrunA17_Chr6g0454301 30.686 277 171 8 4 277 472 730 7.75e-30 120
Msa0883800 MtrunA17_Chr6g0454301 30.000 240 149 7 39 276 6 228 2.69e-25 107
Msa0883800 MtrunA17_Chr6g0454341 30.686 277 171 9 4 277 219 477 9.61e-30 119
Msa0883800 MtrunA17_Chr4g0050341 30.000 280 171 9 6 278 230 491 1.15e-29 118
Msa0883800 MtrunA17_Chr6g0453951 29.630 270 170 8 10 277 275 526 1.29e-29 119
Msa0883800 MtrunA17_Chr2g0302961 29.603 277 164 10 13 277 208 465 1.58e-29 117
Msa0883800 MtrunA17_Chr2g0302991 29.964 277 163 10 13 277 205 462 1.63e-29 117
Msa0883800 MtrunA17_Chr5g0442581 32.500 280 163 7 10 275 207 474 1.94e-29 118
Msa0883800 MtrunA17_Chr8g0377921 32.922 243 143 5 40 275 232 461 2.09e-29 117
Msa0883800 MtrunA17_Chr6g0453961 29.348 276 175 8 4 277 232 489 3.31e-29 117
Msa0883800 MtrunA17_Chr6g0454191 29.562 274 162 8 6 277 236 480 3.49e-29 117
Msa0883800 MtrunA17_Chr8g0365811 27.465 284 189 8 1 279 688 959 3.97e-29 118
Msa0883800 MtrunA17_Chr8g0365811 29.032 217 132 7 9 213 213 419 1.76e-22 99.0
Msa0883800 MtrunA17_Chr6g0464861 32.342 269 150 8 17 277 209 453 4.12e-29 116
Msa0883800 MtrunA17_Chr3g0118721 28.727 275 169 8 10 277 35 289 7.58e-29 113
Msa0883800 MtrunA17_Chr5g0426431 31.752 274 163 8 8 277 224 477 8.49e-29 116
Msa0883800 MtrunA17_Chr1g0207981 31.698 265 159 8 17 277 226 472 1.22e-28 115
Msa0883800 MtrunA17_Chr3g0118771 29.304 273 170 7 10 277 234 488 1.28e-28 115
Msa0883800 MtrunA17_Chr7g0232311 30.605 281 149 10 13 274 207 460 1.31e-28 115
Msa0883800 MtrunA17_Chr8g0334831 29.771 262 136 8 13 250 211 448 1.45e-28 115
Msa0883800 MtrunA17_Chr7g0218831 33.810 210 119 6 66 274 246 436 2.12e-28 114
Msa0883800 MtrunA17_Chr6g0454121 30.417 240 150 6 39 277 255 478 4.62e-28 114
Msa0883800 MtrunA17_Chr6g0454131 29.137 278 173 9 4 277 221 478 5.38e-28 114
Msa0883800 MtrunA17_Chr6g0464871 31.599 269 152 8 17 277 222 466 5.55e-28 113
Msa0883800 MtrunA17_Chr5g0442601 31.429 280 164 9 10 275 608 873 8.35e-28 114
Msa0883800 MtrunA17_Chr5g0442601 35.625 160 86 3 58 204 178 333 1.66e-19 89.7
Msa0883800 MtrunA17_Chr5g0426401 29.927 274 160 7 10 274 57 307 1.06e-27 110
Msa0883800 MtrunA17_Chr3g0118691 29.562 274 168 8 10 277 228 482 1.31e-27 112
Msa0883800 MtrunA17_Chr5g0414331 31.439 264 160 8 17 277 208 453 1.51e-27 112
Msa0883800 MtrunA17_Chr5g0442511 29.137 278 169 8 15 278 231 494 1.54e-27 112
Msa0883800 MtrunA17_Chr6g0454321 28.667 300 187 9 15 305 230 511 1.65e-27 113
Msa0883800 MtrunA17_Chr5g0429711 33.778 225 130 6 58 277 251 461 1.66e-27 112
Msa0883800 MtrunA17_Chr6g0464921 29.963 267 166 6 14 277 207 455 1.84e-27 112
Msa0883800 MtrunA17_Chr5g0431441 29.779 272 165 8 3 270 209 458 1.96e-27 112
Msa0883800 MtrunA17_Chr3g0092641 29.670 273 170 7 8 277 224 477 2.31e-27 112
Msa0883800 MtrunA17_Chr5g0432731 27.941 272 175 5 10 280 48 299 2.39e-27 108
Msa0883800 MtrunA17_Chr5g0429681 29.078 282 166 10 2 274 240 496 3.01e-27 112
Msa0883800 MtrunA17_Chr7g0249981 29.811 265 162 7 17 277 222 466 3.67e-27 111
Msa0883800 MtrunA17_Chr7g0249961 30.579 242 145 6 40 277 37 259 4.56e-27 107
Msa0883800 MtrunA17_Chr5g0409591 32.338 201 105 4 69 253 274 459 5.07e-27 111
Msa0883800 MtrunA17_Chr7g0218821 33.333 210 120 5 66 274 257 447 1.20e-26 109
Msa0883800 MtrunA17_Chr7g0218841 33.333 210 120 6 66 274 247 437 1.77e-26 108
Msa0883800 MtrunA17_Chr4g0032331 30.072 276 167 9 8 280 200 452 2.40e-26 108
Msa0883800 MtrunA17_Chr6g0454171 27.817 284 157 10 4 277 64 309 2.61e-26 106
Msa0883800 MtrunA17_Chr5g0431361 29.730 259 160 5 22 279 218 455 3.45e-26 108
Msa0883800 MtrunA17_Chr3g0118671 29.391 279 170 9 10 282 219 476 3.67e-26 108
Msa0883800 MtrunA17_Chr3g0112771 28.467 274 173 6 10 281 203 455 5.19e-26 108
Msa0883800 MtrunA17_Chr3g0106251 31.298 262 156 5 10 270 48 286 6.43e-26 105
Msa0883800 MtrunA17_Chr5g0414321 31.061 264 161 8 17 277 206 451 7.71e-26 107
Msa0883800 MtrunA17_Chr3g0112761 29.078 282 170 5 6 280 194 452 1.15e-25 107
Msa0883800 MtrunA17_Chr8g0377941 30.418 263 160 5 15 277 222 461 1.38e-25 107
Msa0883800 MtrunA17_Chr5g0401721 31.301 246 152 7 36 277 238 470 3.61e-25 105
Msa0883800 MtrunA17_Chr3g0118711 28.102 274 172 8 10 277 226 480 3.67e-25 105
Msa0883800 MtrunA17_Chr3g0079711 32.308 195 105 5 95 272 2 186 5.46e-25 100
Msa0883800 MtrunA17_Chr7g0218811 32.075 212 124 6 64 274 254 446 6.72e-25 104
Msa0883800 MtrunA17_Chr6g0454371 33.880 183 103 6 96 277 5 170 8.97e-25 99.0
Msa0883800 MtrunA17_Chr4g0042931 30.035 283 167 7 9 279 202 465 1.07e-24 104
Msa0883800 MtrunA17_Chr4g0072771 27.675 271 166 7 9 279 227 467 1.10e-24 104
Msa0883800 MtrunA17_Chr7g0232351 34.595 185 92 6 13 181 207 378 1.12e-24 103
Msa0883800 MtrunA17_Chr4g0072761 28.571 273 161 8 9 279 214 454 1.64e-24 103
Msa0883800 MtrunA17_Chr3g0118701 27.737 274 173 8 10 277 228 482 1.68e-24 103
Msa0883800 MtrunA17_Chr4g0042891 30.108 279 162 8 12 279 211 467 1.92e-24 103
Msa0883800 MtrunA17_Chr5g0431401 27.372 274 173 6 9 279 200 450 2.96e-24 102
Msa0883800 MtrunA17_Chr7g0243721 44.348 115 63 1 2 115 21 135 3.25e-24 96.7
Msa0883800 MtrunA17_Chr6g0454351 29.740 269 154 10 10 277 230 464 4.03e-24 102
Msa0883800 MtrunA17_Chr5g0431371 30.153 262 155 7 22 279 213 450 8.34e-24 101
Msa0883800 MtrunA17_Chr7g0241801 32.661 248 132 10 12 253 187 405 9.86e-24 101
Msa0883800 MtrunA17_Chr7g0241781 31.855 248 134 10 12 253 187 405 1.52e-23 100
Msa0883800 MtrunA17_Chr4g0053321 31.390 223 136 6 72 287 281 493 2.13e-23 100
Msa0883800 MtrunA17_Chr5g0431421 27.737 274 172 6 9 279 200 450 6.94e-23 99.0
Msa0883800 MtrunA17_Chr4g0053501 30.144 209 133 4 72 277 266 464 9.65e-23 99.0
Msa0883800 MtrunA17_Chr3g0092031 39.062 128 73 3 72 198 6 129 9.85e-23 94.4
Msa0883800 MtrunA17_Chr8g0355011 31.250 208 125 5 77 283 177 367 3.31e-22 96.3
Msa0883800 MtrunA17_Chr3g0106231 28.626 262 167 4 10 270 202 444 4.75e-22 96.7
Msa0883800 MtrunA17_Chr5g0448551 38.889 144 83 4 64 206 254 393 3.09e-21 94.4
Msa0883800 MtrunA17_Chr5g0393591 26.761 213 129 3 66 278 251 436 3.63e-21 94.0
Msa0883800 MtrunA17_Chr4g0069611 28.625 269 163 10 22 287 223 465 1.09e-20 92.8
Msa0883800 MtrunA17_Chr7g0218791 32.738 168 97 5 66 232 254 406 1.29e-20 92.4
Msa0883800 MtrunA17_Chr2g0278741 30.342 234 140 8 22 252 310 523 1.97e-20 92.4
Msa0883800 MtrunA17_Chr3g0118661 28.194 227 142 6 10 232 226 435 7.15e-20 90.5
Msa0883800 MtrunA17_Chr3g0118751 25.735 272 152 6 10 277 219 444 9.27e-20 89.7
Msa0883800 MtrunA17_Chr5g0427571 28.163 245 153 8 18 256 49 276 1.06e-19 88.2
Msa0883800 MtrunA17_Chr8g0337381 34.694 147 82 3 141 286 1 134 1.25e-19 84.0
Msa0883800 MtrunA17_Chr2g0278721 30.808 198 124 5 4 198 210 397 3.08e-19 89.0
Msa0883800 MtrunA17_Chr2g0278721 28.516 256 159 11 4 258 723 955 3.23e-15 77.0
Msa0883800 MtrunA17_Chr8g0336251 29.487 234 137 9 18 242 219 433 3.59e-19 88.2
Msa0883800 MtrunA17_Chr8g0336321 29.487 234 137 9 18 242 219 433 5.57e-19 87.8
Msa0883800 MtrunA17_Chr6g0482061 31.884 276 165 9 10 278 221 480 8.86e-19 87.0
Msa0883800 MtrunA17_Chr5g0431431 31.250 192 111 5 10 199 152 324 9.80e-19 86.3
Msa0883800 MtrunA17_Chr2g0302851 38.406 138 72 5 72 201 270 402 9.83e-19 87.0
Msa0883800 MtrunA17_Chr6g0464091 36.232 138 77 4 71 201 278 411 1.95e-18 86.3
Msa0883800 MtrunA17_Chr6g0454251 32.184 174 112 5 10 181 225 394 2.46e-18 85.5
Msa0883800 MtrunA17_Chr4g0039881 35.484 155 84 6 58 201 229 378 2.64e-18 85.5
Msa0883800 MtrunA17_Chr8g0336261 35.570 149 79 5 94 241 3 135 3.03e-18 80.1
Msa0883800 MtrunA17_Chr6g0466841 28.986 207 124 7 8 201 208 404 5.16e-18 84.7
Msa0883800 MtrunA17_Chr1g0196851 25.092 271 174 5 15 280 252 498 6.32e-17 81.6
Msa0883800 MtrunA17_Chr8g0352711 85.714 42 6 0 245 286 1 42 7.01e-17 73.6
Msa0883800 MtrunA17_Chr6g0466831 28.986 207 124 7 8 201 208 404 7.32e-17 81.3
Msa0883800 MtrunA17_Chr1g0207881 29.323 133 86 2 146 278 261 385 9.64e-17 80.5
Msa0883800 MtrunA17_Chr8g0367221 35.385 195 111 7 46 237 1033 1215 1.27e-16 81.3
Msa0883800 MtrunA17_Chr8g0367221 34.395 157 89 4 61 206 252 405 3.34e-16 80.1
Msa0883800 MtrunA17_Chr8g0367221 35.556 135 82 2 67 198 1543 1675 1.17e-15 78.6
Msa0883800 MtrunA17_Chr6g0454231 32.667 150 85 5 137 285 92 226 1.67e-16 80.5
Msa0883800 MtrunA17_Chr4g0029131 26.255 259 159 5 9 257 206 442 5.43e-16 79.0
Msa0883800 MtrunA17_Chr4g0029151 26.531 245 146 7 15 248 220 441 4.01e-14 73.2
Msa0883800 MtrunA17_Chr2g0319731 28.405 257 153 8 16 263 232 466 4.28e-14 73.2
Msa0883800 MtrunA17_Chr2g0319801 29.911 224 132 7 22 242 221 422 9.29e-14 72.0
Msa0883800 MtrunA17_Chr4g0066241 45.882 85 44 2 1 84 66 149 2.06e-13 67.4
Msa0883800 MtrunA17_Chr4g0040691 24.000 225 148 4 22 244 221 424 3.57e-13 70.1
Msa0883800 MtrunA17_Chr4g0040711 24.889 225 146 5 22 244 221 424 2.61e-12 67.4
Msa0883800 MtrunA17_Chr4g0066231 34.667 75 49 0 180 254 1 75 1.46e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0883800 AT4G34138.1 46.503 286 140 6 1 284 211 485 1.81e-76 243
Msa0883800 AT4G34131.1 47.143 280 138 6 1 279 211 481 2.41e-72 232
Msa0883800 AT2G15490.3 44.326 282 146 6 2 281 209 481 6.98e-69 223
Msa0883800 AT2G36780.1 44.526 274 145 5 11 280 221 491 1.16e-68 223
Msa0883800 AT2G15480.2 42.466 292 149 6 1 281 211 494 1.98e-68 223
Msa0883800 AT2G15480.1 43.463 283 149 6 1 281 211 484 3.41e-68 222
Msa0883800 AT2G15490.1 43.509 285 147 6 2 281 209 484 3.41e-68 222
Msa0883800 AT2G36800.1 45.455 275 141 7 11 280 220 490 1.24e-67 221
Msa0883800 AT4G34135.1 47.670 279 139 4 1 279 212 483 7.97e-66 216
Msa0883800 AT2G36770.1 42.804 271 148 5 11 277 221 488 2.24e-65 214
Msa0883800 AT3G53160.1 43.015 272 146 6 11 277 215 482 5.88e-65 213
Msa0883800 AT2G36760.1 41.304 276 155 5 6 277 216 488 1.64e-64 213
Msa0883800 AT2G36790.1 43.682 277 147 7 11 282 220 492 4.77e-63 209
Msa0883800 AT2G36750.1 39.583 288 167 5 1 284 206 490 2.43e-62 206
Msa0883800 AT3G53150.1 37.671 292 160 7 4 277 222 509 4.09e-54 186
Msa0883800 AT1G73880.1 34.066 273 157 7 11 280 217 469 3.27e-39 145
Msa0883800 AT5G12890.1 31.930 285 168 5 1 276 213 480 6.94e-38 141
Msa0883800 AT3G16520.3 33.571 280 144 8 9 275 207 457 6.72e-37 138
Msa0883800 AT2G29740.1 33.213 277 147 9 13 277 224 474 1.67e-36 137
Msa0883800 AT3G16520.1 38.049 205 110 5 9 206 207 401 9.80e-36 135
Msa0883800 AT3G16520.2 38.049 205 110 5 9 206 207 401 1.07e-35 135
Msa0883800 AT1G07250.1 33.829 269 157 9 13 277 221 472 1.17e-35 135
Msa0883800 AT2G16890.2 33.096 281 161 10 1 277 210 467 2.75e-35 134
Msa0883800 AT5G26310.1 35.345 232 118 5 66 278 250 468 4.07e-35 134
Msa0883800 AT2G29730.1 34.182 275 161 8 9 281 210 466 4.38e-35 133
Msa0883800 AT1G07240.1 30.451 266 174 5 13 277 220 475 4.92e-35 134
Msa0883800 AT4G15260.1 32.384 281 160 7 10 277 91 354 7.83e-35 130
Msa0883800 AT1G06000.1 33.562 292 150 10 4 277 168 433 8.82e-35 132
Msa0883800 AT3G21790.1 31.636 275 166 5 13 277 216 478 2.01e-34 132
Msa0883800 AT3G21800.1 32.975 279 158 8 13 277 212 475 3.99e-34 131
Msa0883800 AT5G66690.1 34.553 246 128 6 64 290 248 479 4.08e-34 131
Msa0883800 AT4G15280.1 35.217 230 135 4 57 277 249 473 6.84e-34 130
Msa0883800 AT4G15280.2 35.217 230 135 4 57 277 281 505 7.46e-34 130
Msa0883800 AT3G50740.1 31.818 264 139 9 35 280 236 476 9.11e-34 130
Msa0883800 AT3G21760.1 31.541 279 168 6 10 277 214 480 9.26e-34 130
Msa0883800 AT2G29750.1 33.456 272 152 12 13 277 224 473 1.11e-33 130
Msa0883800 AT5G14860.1 34.783 276 153 9 7 277 222 475 2.95e-33 129
Msa0883800 AT1G78270.1 31.387 274 165 7 10 277 224 480 5.15e-33 128
Msa0883800 AT1G10400.1 32.609 276 158 9 6 277 211 462 1.50e-32 126
Msa0883800 AT2G29710.1 33.333 273 154 8 6 277 217 462 1.77e-32 126
Msa0883800 AT2G18560.1 30.531 226 136 5 58 272 156 371 2.75e-32 124
Msa0883800 AT2G16890.3 35.266 207 115 7 1 204 210 400 1.66e-31 123
Msa0883800 AT1G07260.1 32.287 223 141 4 57 277 257 471 2.21e-31 123
Msa0883800 AT2G43820.1 33.333 270 152 10 17 279 200 448 7.01e-31 122
Msa0883800 AT1G51210.1 35.025 197 113 5 11 206 215 397 1.00e-30 121
Msa0883800 AT2G31750.2 30.405 296 174 10 15 297 205 481 1.04e-30 122
Msa0883800 AT1G22400.1 30.612 245 150 7 8 249 225 452 1.15e-30 121
Msa0883800 AT4G15480.1 30.741 270 173 7 9 277 222 478 2.21e-30 120
Msa0883800 AT3G46670.1 29.123 285 172 8 1 280 192 451 3.84e-30 119
Msa0883800 AT5G05870.1 29.032 279 173 7 1 277 199 454 3.85e-30 120
Msa0883800 AT2G31750.1 31.086 267 159 9 17 277 207 454 6.10e-30 119
Msa0883800 AT2G36970.1 32.922 243 127 6 40 279 263 472 6.75e-30 119
Msa0883800 AT4G36770.1 36.058 208 105 5 68 260 252 446 7.60e-30 119
Msa0883800 AT2G43840.2 31.295 278 149 10 15 278 198 447 8.00e-30 119
Msa0883800 AT2G18570.1 28.794 257 144 8 11 251 205 438 1.16e-29 119
Msa0883800 AT2G43840.1 31.159 276 152 9 15 278 198 447 1.27e-29 118
Msa0883800 AT5G59590.1 30.970 268 156 8 6 270 201 442 1.56e-29 118
Msa0883800 AT1G22380.1 28.520 277 171 9 8 277 224 480 2.25e-29 118
Msa0883800 AT5G03490.1 31.868 273 152 10 11 278 220 463 2.51e-29 117
Msa0883800 AT1G22370.1 30.732 205 136 5 6 207 47 248 3.44e-29 114
Msa0883800 AT4G14090.1 30.798 263 159 6 15 276 214 454 3.83e-29 117
Msa0883800 AT5G38010.1 27.170 265 171 4 13 277 211 453 1.09e-28 115
Msa0883800 AT1G22360.1 32.195 205 133 4 6 207 219 420 1.32e-28 115
Msa0883800 AT1G05675.1 35.577 208 112 6 70 274 261 449 1.32e-28 115
Msa0883800 AT1G22360.2 32.195 205 133 4 6 207 219 420 1.57e-28 115
Msa0883800 AT1G22370.2 30.732 205 136 5 6 207 217 418 3.89e-28 114
Msa0883800 AT5G38040.1 27.170 265 171 4 13 277 207 449 4.40e-28 114
Msa0883800 AT1G22340.1 27.636 275 177 6 8 277 224 481 5.26e-28 114
Msa0883800 AT2G30150.1 30.345 290 159 8 4 280 180 439 5.50e-28 113
Msa0883800 AT3G46660.1 30.612 245 142 7 39 280 239 458 5.80e-28 114
Msa0883800 AT2G30150.2 30.345 290 159 8 4 280 196 455 7.28e-28 113
Msa0883800 AT3G46680.1 27.273 264 166 6 13 274 207 446 7.36e-28 113
Msa0883800 AT1G01420.2 33.884 242 130 9 60 287 252 477 1.32e-27 113
Msa0883800 AT1G01420.1 33.884 242 130 9 60 287 249 474 1.40e-27 113
Msa0883800 AT3G11340.1 29.537 281 171 6 1 280 193 447 1.88e-27 112
Msa0883800 AT3G21780.1 29.749 279 171 7 10 277 204 468 2.55e-27 112
Msa0883800 AT3G46700.1 28.889 270 165 8 13 279 201 446 1.11e-26 110
Msa0883800 AT2G28080.1 31.481 216 126 6 5 206 207 414 1.46e-26 110
Msa0883800 AT4G15490.1 30.483 269 171 8 10 277 213 466 1.74e-26 110
Msa0883800 AT3G21750.1 31.541 279 163 10 13 277 204 468 2.12e-26 109
Msa0883800 AT2G31790.1 32.922 243 143 7 40 277 229 456 2.59e-26 109
Msa0883800 AT1G05680.1 33.981 206 118 5 70 274 261 449 2.65e-26 109
Msa0883800 AT2G30140.1 28.571 266 160 6 15 277 213 451 5.68e-26 108
Msa0883800 AT2G30140.2 28.571 266 160 6 15 277 212 450 6.45e-26 108
Msa0883800 AT5G17030.1 27.925 265 164 7 14 277 217 455 1.78e-25 107
Msa0883800 AT5G59580.1 28.413 271 166 7 13 280 205 450 2.10e-25 106
Msa0883800 AT4G34135.2 47.458 118 61 1 1 118 212 328 2.24e-25 104
Msa0883800 AT2G23260.1 31.461 267 162 9 15 277 204 453 2.91e-25 106
Msa0883800 AT2G26480.1 26.374 273 177 7 4 274 192 442 3.30e-25 105
Msa0883800 AT4G01070.1 29.091 275 155 8 13 270 209 460 5.31e-25 105
Msa0883800 AT5G05880.1 30.037 273 164 6 11 280 203 451 6.52e-25 105
Msa0883800 AT1G24100.1 31.321 265 162 7 17 277 210 458 1.24e-24 104
Msa0883800 AT3G46650.1 29.044 272 164 9 2 270 180 425 1.68e-24 103
Msa0883800 AT1G01390.1 31.925 213 113 6 13 208 209 406 3.13e-24 103
Msa0883800 AT2G23250.1 31.439 264 163 9 15 278 191 436 3.18e-24 103
Msa0883800 AT1G01390.2 31.925 213 113 6 13 208 226 423 3.45e-24 103
Msa0883800 AT5G05900.1 31.429 210 123 4 66 275 257 445 5.41e-24 102
Msa0883800 AT3G02100.1 29.643 280 155 9 5 279 219 461 1.81e-23 101
Msa0883800 AT3G46690.1 27.138 269 171 5 13 279 206 451 2.02e-23 100
Msa0883800 AT5G17040.2 25.856 263 167 6 16 277 102 337 2.24e-23 99.4
Msa0883800 AT4G15500.1 26.007 273 186 7 10 281 209 466 2.48e-23 100
Msa0883800 AT5G05860.1 28.205 273 169 5 1 270 192 440 3.29e-23 100
Msa0883800 AT5G17050.1 26.966 267 162 8 14 277 220 456 1.03e-22 99.0
Msa0883800 AT5G17040.1 24.906 265 167 7 16 277 204 439 1.31e-22 98.6
Msa0883800 AT4G15550.1 30.451 266 160 6 15 276 228 472 1.62e-22 98.6
Msa0883800 AT1G30530.1 29.717 212 126 5 68 277 260 450 1.69e-22 98.2
Msa0883800 AT5G05890.1 27.402 281 181 5 1 280 197 455 1.74e-22 98.2
Msa0883800 AT3G21560.1 27.106 273 176 7 10 277 218 472 6.50e-22 97.1
Msa0883800 AT3G55710.1 28.794 257 158 7 11 259 205 444 1.35e-21 95.9
Msa0883800 AT3G55700.1 26.848 257 163 7 8 259 204 440 1.60e-21 95.5
Msa0883800 AT3G46720.1 28.112 249 150 6 31 279 223 442 5.74e-21 94.0
Msa0883800 AT5G49690.1 33.871 186 102 7 71 254 266 432 8.26e-21 93.6
Msa0883800 AT3G22250.1 35.119 168 101 4 41 206 247 408 2.87e-20 92.0
Msa0883800 AT1G05560.2 29.455 275 158 8 15 277 251 501 3.92e-20 91.7
Msa0883800 AT1G05560.1 29.455 275 158 8 15 277 201 451 7.00e-20 90.9
Msa0883800 AT1G05530.1 28.309 272 168 7 15 277 201 454 1.89e-19 89.4
Msa0883800 AT2G22590.1 33.529 170 99 4 71 237 273 431 5.86e-19 88.2
Msa0883800 AT5G37950.2 25.749 167 116 2 15 181 179 337 4.08e-16 79.0
Msa0883800 AT5G37950.1 25.749 167 116 2 15 181 185 343 4.08e-16 79.0
Msa0883800 AT5G65550.1 31.469 143 90 4 71 213 269 403 6.29e-16 79.0
Msa0883800 AT5G53990.1 29.508 183 114 6 72 251 244 414 1.10e-13 72.0
Msa0883800 AT1G64910.1 24.444 225 142 7 22 242 205 405 3.79e-13 70.5
Msa0883800 AT3G29630.2 28.704 216 141 6 56 260 198 411 1.22e-12 68.9
Msa0883800 AT1G50580.1 29.897 194 128 5 72 260 245 435 1.45e-12 68.9
Msa0883800 AT3G29630.1 28.866 194 131 5 72 260 246 437 1.57e-12 68.6
Msa0883800 AT2G22930.1 24.779 226 146 6 22 245 205 408 2.58e-12 67.8
Msa0883800 AT4G27570.1 26.437 174 115 4 71 242 249 411 5.08e-12 67.0
Msa0883800 AT4G09500.2 27.841 176 114 4 72 245 244 408 1.21e-11 65.9
Msa0883800 AT4G09500.1 27.841 176 114 4 72 245 219 383 1.29e-11 65.9
Msa0883800 AT5G54010.1 25.112 223 143 5 22 242 211 411 2.69e-11 64.7
Msa0883800 AT4G27560.1 26.857 175 113 6 71 242 249 411 3.35e-11 64.7

Find 75 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAACAGAATTCTCTTTCT+TGG 0.156521 6_1:-35675453 None:intergenic
GAGATAGTGGTTTGTTTAAA+TGG 0.203986 6_1:+35675423 Msa0883800:CDS
AAGAGTGAAAGAAAGTAATA+AGG 0.227471 6_1:+35675625 Msa0883800:CDS
GCTTAGGACCAGTTTCATTA+TGG 0.246749 6_1:+35675348 Msa0883800:CDS
GTAATAAGGGTTATTTGATA+TGG 0.259224 6_1:+35675639 Msa0883800:CDS
TATCTAGTTGTGATTTCATT+TGG 0.296429 6_1:+35675546 Msa0883800:CDS
GATTTCCATGCATGTGTATA+TGG 0.313314 6_1:-35676465 None:intergenic
TGTCACTTGGGGTTAGAAAA+TGG 0.314767 6_1:+35675840 Msa0883800:CDS
GAGCATTACAAGAATGCATT+TGG 0.359352 6_1:+35675311 Msa0883800:CDS
CTTAGGACCAGTTTCATTAT+GGG 0.370255 6_1:+35675349 Msa0883800:CDS
TAATAAGGGTTATTTGATAT+GGG 0.371013 6_1:+35675640 Msa0883800:CDS
GAGGATATTGCAAATGCTAT+TGG 0.375786 6_1:+35675905 Msa0883800:CDS
TGGTTTGCCCATAATGAAAC+TGG 0.381991 6_1:-35675356 None:intergenic
GGAACAAAGTGTTGGAGCTT+AGG 0.385573 6_1:+35675332 Msa0883800:CDS
TCTGTTCTCTATGTAAGTTT+TGG 0.395308 6_1:+35675467 Msa0883800:CDS
AGAGTGAAAGAAAGTAATAA+GGG 0.400189 6_1:+35675626 Msa0883800:CDS
CTGCCTTATCAGAAACATCT+TGG 0.405886 6_1:-35675376 None:intergenic
ATACTTGAGAACAAAGCTAT+TGG 0.416426 6_1:+35675683 Msa0883800:CDS
CTCTCAACGACGGTCTCTCC+AGG 0.418239 6_1:-35676491 None:intergenic
CTTGGAAGGTTCCTTGATAC+AGG 0.418344 6_1:+35676581 Msa0883800:CDS
GGGTTATTTGATATGGGGTT+GGG 0.425706 6_1:+35675646 Msa0883800:CDS
AGAGGTGACACAAATGTAGA+AGG 0.425777 6_1:+35675401 Msa0883800:CDS
CTCAAACATCAAAGGCACTA+TGG 0.425882 6_1:+35676067 Msa0883800:CDS
ATCTAGTTGTGATTTCATTT+GGG 0.429610 6_1:+35675547 Msa0883800:CDS
CTGGGTTGCCTATGGTGACT+TGG 0.438249 6_1:+35675756 Msa0883800:CDS
TATTGCAAATGCTATTGGTT+TGG 0.453313 6_1:+35675910 Msa0883800:CDS
TTCTCAAGTATCAGCAATTG+TGG 0.464483 6_1:-35675671 None:intergenic
ATACTAACGACATTGTGAAA+AGG 0.466063 6_1:+35675882 Msa0883800:CDS
GCTAAAGCTTTGAGTGATGA+TGG 0.468067 6_1:+35675974 Msa0883800:CDS
AAACCAAGATGTTTCTGATA+AGG 0.478083 6_1:+35675373 Msa0883800:CDS
ATTGGTTTGGTGATGACAAA+TGG 0.478405 6_1:+35675923 Msa0883800:CDS
TACTAACGACATTGTGAAAA+GGG 0.484737 6_1:+35675883 Msa0883800:CDS
GGAGGAATTGTGACTAGTTG+TGG 0.486006 6_1:+35675704 Msa0883800:CDS
AGGGTTATTTGATATGGGGT+TGG 0.495509 6_1:+35675645 Msa0883800:CDS
ACATGCATGGAAATCCTCCC+TGG 0.507552 6_1:+35676473 Msa0883800:CDS
TGATATATTGACCTCGGCCA+TGG 0.513463 6_1:-35676525 None:intergenic
ATGCATTTGGAACAAAGTGT+TGG 0.515387 6_1:+35675324 Msa0883800:CDS
ACAAATGTAGAAGGAGATAG+TGG 0.523052 6_1:+35675410 Msa0883800:CDS
CTTGAGAACAAAGCTATTGG+AGG 0.529478 6_1:+35675686 Msa0883800:CDS
CTGTATCAAGGAACCTTCCA+AGG 0.529519 6_1:-35676580 None:intergenic
ATTTCAATGAGTTGAGATGA+TGG 0.532862 6_1:-35675506 None:intergenic
GGAAAGAAAGCTATACTTGT+TGG 0.533864 6_1:+35675995 Msa0883800:CDS
GACAAATGGAAAAGAAGTTG+AGG 0.535146 6_1:+35675937 Msa0883800:CDS
GAGGAATTGTGACTAGTTGT+GGG 0.535733 6_1:+35675705 Msa0883800:CDS
CGTAAAAGTAATGATAAAGA+AGG 0.537193 6_1:+35675575 Msa0883800:CDS
ACTTACAGAAGAGGGACCCT+TGG 0.539038 6_1:+35676563 Msa0883800:CDS
AACATAATTTGTTATGAAGG+CGG 0.540371 6_1:+35675217 None:intergenic
AAATTTGATACAAATAATTG+AGG 0.545066 6_1:+35676033 Msa0883800:CDS
AGCAATGGCGACCTGTATCA+AGG 0.551521 6_1:-35676592 None:intergenic
AATAAGGGTTATTTGATATG+GGG 0.553332 6_1:+35675641 Msa0883800:CDS
AATACAAGTAGTAAAAGCTA+TGG 0.561191 6_1:+35675245 Msa0883800:CDS
AAGAAAGCTATACTTGTTGG+TGG 0.563374 6_1:+35675998 Msa0883800:CDS
TCTCAAGTATCAGCAATTGT+GGG 0.564495 6_1:-35675670 None:intergenic
TATACAAAACTTACAGAAGA+GGG 0.566991 6_1:+35676555 Msa0883800:CDS
TTTCAATGAGTTGAGATGAT+GGG 0.567928 6_1:-35675505 None:intergenic
TGTGAATGCTGGGTTGCCTA+TGG 0.575862 6_1:+35675748 Msa0883800:CDS
ATAGTTGAAAGTGTGAATGC+TGG 0.575997 6_1:+35675737 Msa0883800:CDS
GTTTCTGATAAGGCAGAAAG+AGG 0.580364 6_1:+35675383 Msa0883800:CDS
AATAAAGGCCAAGTCACCAT+AGG 0.582020 6_1:-35675764 None:intergenic
ACAGAAGAGGGACCCTTGGA+AGG 0.586076 6_1:+35676567 Msa0883800:CDS
CTATACCATATACACATGCA+TGG 0.588789 6_1:+35676460 Msa0883800:CDS
GGCACTGACACGTCTAGCAA+TGG 0.593308 6_1:-35676607 None:intergenic
ACGTATCGAAACCATGGCCG+AGG 0.596675 6_1:+35676514 Msa0883800:CDS
TCTCAACGACGGTCTCTCCA+GGG 0.606714 6_1:-35676490 None:intergenic
ATATACAAAACTTACAGAAG+AGG 0.612988 6_1:+35676554 Msa0883800:CDS
TTAAGTCACTCAAACATCAA+AGG 0.613763 6_1:+35676059 Msa0883800:CDS
TAGTTGAAAGTGTGAATGCT+GGG 0.627794 6_1:+35675738 Msa0883800:CDS
CTCAAGTATCAGCAATTGTG+GGG 0.646980 6_1:-35675669 None:intergenic
TGAGAGACGTATCGAAACCA+TGG 0.672164 6_1:+35676508 Msa0883800:CDS
TTCGATACGTCTCTCAACGA+CGG 0.685076 6_1:-35676501 None:intergenic
TGTATCAAGGAACCTTCCAA+GGG 0.691256 6_1:-35676579 None:intergenic
TAACGACATTGTGAAAAGGG+AGG 0.694022 6_1:+35675886 Msa0883800:CDS
GAATTGTGACTAGTTGTGGG+TGG 0.698494 6_1:+35675708 Msa0883800:CDS
GTGATGTGATATATTGACCT+CGG 0.706212 6_1:-35676531 None:intergenic
CAACGACGGTCTCTCCAGGG+AGG 0.710426 6_1:-35676487 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTGATACAAATAATTG+AGG + chr6_1:35676033-35676052 Msa0883800:CDS 15.0%
!! NNNNNNNNNNTTGGAAGATT+GGG + chr6_1:35676421-35676440 Msa0883800:intron 15.0%
!! AAATTTGATACAAATAATTG+AGG + chr6_1:35676033-35676052 Msa0883800:CDS 15.0%
!! NNNNNNNNNNTTGGAAGATT+GGG + chr6_1:35676421-35676440 Msa0883800:intron 15.0%
!! TAATAAGGGTTATTTGATAT+GGG + chr6_1:35675640-35675659 Msa0883800:CDS 20.0%
!!! GAATTCAAGTTTTTTCTATT+TGG + chr6_1:35676246-35676265 Msa0883800:intron 20.0%
!! TAATAAGGGTTATTTGATAT+GGG + chr6_1:35675640-35675659 Msa0883800:CDS 20.0%
!!! GAATTCAAGTTTTTTCTATT+TGG + chr6_1:35676246-35676265 Msa0883800:intron 20.0%
! AATACAAGTAGTAAAAGCTA+TGG + chr6_1:35675245-35675264 Msa0883800:CDS 25.0%
! TATCTAGTTGTGATTTCATT+TGG + chr6_1:35675546-35675565 Msa0883800:CDS 25.0%
! ATCTAGTTGTGATTTCATTT+GGG + chr6_1:35675547-35675566 Msa0883800:CDS 25.0%
! CGTAAAAGTAATGATAAAGA+AGG + chr6_1:35675575-35675594 Msa0883800:CDS 25.0%
!! TAAAGAAGGTGAAGATTTTA+TGG + chr6_1:35675589-35675608 Msa0883800:CDS 25.0%
! AAGAGTGAAAGAAAGTAATA+AGG + chr6_1:35675625-35675644 Msa0883800:CDS 25.0%
! AGAGTGAAAGAAAGTAATAA+GGG + chr6_1:35675626-35675645 Msa0883800:CDS 25.0%
! GTAATAAGGGTTATTTGATA+TGG + chr6_1:35675639-35675658 Msa0883800:CDS 25.0%
! AATAAGGGTTATTTGATATG+GGG + chr6_1:35675641-35675660 Msa0883800:CDS 25.0%
! AAAAATTGCTCAGCAAATAA+AGG - chr6_1:35675782-35675801 None:intergenic 25.0%
!!! GCAATTTTTTCATGAGAAAT+TGG + chr6_1:35675793-35675812 Msa0883800:CDS 25.0%
!!! ATTTTTTCATGAGAAATTGG+TGG + chr6_1:35675796-35675815 Msa0883800:CDS 25.0%
!! TGGTTGAAGTGTTAAAAATT+GGG + chr6_1:35675816-35675835 Msa0883800:CDS 25.0%
! AAATAGGCCAATTTAAATGT+TGG + chr6_1:35676095-35676114 Msa0883800:intron 25.0%
! GCAATAACCAACATTTAAAT+TGG - chr6_1:35676105-35676124 None:intergenic 25.0%
! GAATGCAAATTTCAAGATAT+TGG + chr6_1:35676143-35676162 Msa0883800:intron 25.0%
!!! TATTTTTGTTTTCAACCAAG+AGG + chr6_1:35676201-35676220 Msa0883800:intron 25.0%
! ATATACAAAACTTACAGAAG+AGG + chr6_1:35676554-35676573 Msa0883800:CDS 25.0%
! TATACAAAACTTACAGAAGA+GGG + chr6_1:35676555-35676574 Msa0883800:CDS 25.0%
! AATACAAGTAGTAAAAGCTA+TGG + chr6_1:35675245-35675264 Msa0883800:CDS 25.0%
! TATCTAGTTGTGATTTCATT+TGG + chr6_1:35675546-35675565 Msa0883800:CDS 25.0%
! ATCTAGTTGTGATTTCATTT+GGG + chr6_1:35675547-35675566 Msa0883800:CDS 25.0%
! CGTAAAAGTAATGATAAAGA+AGG + chr6_1:35675575-35675594 Msa0883800:CDS 25.0%
!! TAAAGAAGGTGAAGATTTTA+TGG + chr6_1:35675589-35675608 Msa0883800:CDS 25.0%
! AAGAGTGAAAGAAAGTAATA+AGG + chr6_1:35675625-35675644 Msa0883800:CDS 25.0%
! AGAGTGAAAGAAAGTAATAA+GGG + chr6_1:35675626-35675645 Msa0883800:CDS 25.0%
! GTAATAAGGGTTATTTGATA+TGG + chr6_1:35675639-35675658 Msa0883800:CDS 25.0%
! AATAAGGGTTATTTGATATG+GGG + chr6_1:35675641-35675660 Msa0883800:CDS 25.0%
! AAAAATTGCTCAGCAAATAA+AGG - chr6_1:35675782-35675801 None:intergenic 25.0%
!!! GCAATTTTTTCATGAGAAAT+TGG + chr6_1:35675793-35675812 Msa0883800:CDS 25.0%
!!! ATTTTTTCATGAGAAATTGG+TGG + chr6_1:35675796-35675815 Msa0883800:CDS 25.0%
!! TGGTTGAAGTGTTAAAAATT+GGG + chr6_1:35675816-35675835 Msa0883800:CDS 25.0%
! AAATAGGCCAATTTAAATGT+TGG + chr6_1:35676095-35676114 Msa0883800:intron 25.0%
! GCAATAACCAACATTTAAAT+TGG - chr6_1:35676105-35676124 None:intergenic 25.0%
! GAATGCAAATTTCAAGATAT+TGG + chr6_1:35676143-35676162 Msa0883800:intron 25.0%
!!! TATTTTTGTTTTCAACCAAG+AGG + chr6_1:35676201-35676220 Msa0883800:intron 25.0%
! ATATACAAAACTTACAGAAG+AGG + chr6_1:35676554-35676573 Msa0883800:CDS 25.0%
! TATACAAAACTTACAGAAGA+GGG + chr6_1:35676555-35676574 Msa0883800:CDS 25.0%
! GCAGTATTCAATAGCTTTTA+CGG + chr6_1:35675269-35675288 Msa0883800:CDS 30.0%
! ATTCAATAGCTTTTACGGTT+TGG + chr6_1:35675274-35675293 Msa0883800:CDS 30.0%
! AAACCAAGATGTTTCTGATA+AGG + chr6_1:35675373-35675392 Msa0883800:CDS 30.0%
!! GAGATAGTGGTTTGTTTAAA+TGG + chr6_1:35675423-35675442 Msa0883800:CDS 30.0%
! TCTGTTCTCTATGTAAGTTT+TGG + chr6_1:35675467-35675486 Msa0883800:CDS 30.0%
! TTTCAATGAGTTGAGATGAT+GGG - chr6_1:35675508-35675527 None:intergenic 30.0%
! ATTTCAATGAGTTGAGATGA+TGG - chr6_1:35675509-35675528 None:intergenic 30.0%
ATACTTGAGAACAAAGCTAT+TGG + chr6_1:35675683-35675702 Msa0883800:CDS 30.0%
! GTGGTTGAAGTGTTAAAAAT+TGG + chr6_1:35675815-35675834 Msa0883800:CDS 30.0%
! GGTTGAAGTGTTAAAAATTG+GGG + chr6_1:35675817-35675836 Msa0883800:CDS 30.0%
GGGTTAGAAAATGGAAAAAT+TGG + chr6_1:35675849-35675868 Msa0883800:CDS 30.0%
ATACTAACGACATTGTGAAA+AGG + chr6_1:35675882-35675901 Msa0883800:CDS 30.0%
TACTAACGACATTGTGAAAA+GGG + chr6_1:35675883-35675902 Msa0883800:CDS 30.0%
! TATTGCAAATGCTATTGGTT+TGG + chr6_1:35675910-35675929 Msa0883800:CDS 30.0%
TTAAGTCACTCAAACATCAA+AGG + chr6_1:35676059-35676078 Msa0883800:CDS 30.0%
AGGCACTATGGTAATTAAAT+AGG + chr6_1:35676079-35676098 Msa0883800:intron 30.0%
TTCAAGATATTGGTATTGTG+TGG + chr6_1:35676153-35676172 Msa0883800:intron 30.0%
ATTTCTATTCGTCTTAAGCA+GGG - chr6_1:35676309-35676328 None:intergenic 30.0%
! GCAGTATTCAATAGCTTTTA+CGG + chr6_1:35675269-35675288 Msa0883800:CDS 30.0%
! ATTCAATAGCTTTTACGGTT+TGG + chr6_1:35675274-35675293 Msa0883800:CDS 30.0%
! AAACCAAGATGTTTCTGATA+AGG + chr6_1:35675373-35675392 Msa0883800:CDS 30.0%
!! GAGATAGTGGTTTGTTTAAA+TGG + chr6_1:35675423-35675442 Msa0883800:CDS 30.0%
! TCTGTTCTCTATGTAAGTTT+TGG + chr6_1:35675467-35675486 Msa0883800:CDS 30.0%
! TTTCAATGAGTTGAGATGAT+GGG - chr6_1:35675508-35675527 None:intergenic 30.0%
! ATTTCAATGAGTTGAGATGA+TGG - chr6_1:35675509-35675528 None:intergenic 30.0%
ATACTTGAGAACAAAGCTAT+TGG + chr6_1:35675683-35675702 Msa0883800:CDS 30.0%
! GTGGTTGAAGTGTTAAAAAT+TGG + chr6_1:35675815-35675834 Msa0883800:CDS 30.0%
! GGTTGAAGTGTTAAAAATTG+GGG + chr6_1:35675817-35675836 Msa0883800:CDS 30.0%
GGGTTAGAAAATGGAAAAAT+TGG + chr6_1:35675849-35675868 Msa0883800:CDS 30.0%
ATACTAACGACATTGTGAAA+AGG + chr6_1:35675882-35675901 Msa0883800:CDS 30.0%
TACTAACGACATTGTGAAAA+GGG + chr6_1:35675883-35675902 Msa0883800:CDS 30.0%
! TATTGCAAATGCTATTGGTT+TGG + chr6_1:35675910-35675929 Msa0883800:CDS 30.0%
TTAAGTCACTCAAACATCAA+AGG + chr6_1:35676059-35676078 Msa0883800:CDS 30.0%
AGGCACTATGGTAATTAAAT+AGG + chr6_1:35676079-35676098 Msa0883800:intron 30.0%
TTCAAGATATTGGTATTGTG+TGG + chr6_1:35676153-35676172 Msa0883800:intron 30.0%
ATTTCTATTCGTCTTAAGCA+GGG - chr6_1:35676309-35676328 None:intergenic 30.0%
!! AATAGCTTTTACGGTTTGGA+GGG + chr6_1:35675278-35675297 Msa0883800:CDS 35.0%
GAGCATTACAAGAATGCATT+TGG + chr6_1:35675311-35675330 Msa0883800:CDS 35.0%
! ATGCATTTGGAACAAAGTGT+TGG + chr6_1:35675324-35675343 Msa0883800:CDS 35.0%
CTTAGGACCAGTTTCATTAT+GGG + chr6_1:35675349-35675368 Msa0883800:CDS 35.0%
ACAAATGTAGAAGGAGATAG+TGG + chr6_1:35675410-35675429 Msa0883800:CDS 35.0%
GAGAACAGAATTCTCTTTCT+TGG - chr6_1:35675456-35675475 None:intergenic 35.0%
! AGAAGGTGAAGATTTTATGG+AGG + chr6_1:35675592-35675611 Msa0883800:CDS 35.0%
TCTCAAGTATCAGCAATTGT+GGG - chr6_1:35675673-35675692 None:intergenic 35.0%
TTCTCAAGTATCAGCAATTG+TGG - chr6_1:35675674-35675693 None:intergenic 35.0%
! ATAGTTGAAAGTGTGAATGC+TGG + chr6_1:35675737-35675756 Msa0883800:CDS 35.0%
! TAGTTGAAAGTGTGAATGCT+GGG + chr6_1:35675738-35675757 Msa0883800:CDS 35.0%
!! TTAAAAATTGGGGTGTCACT+TGG + chr6_1:35675827-35675846 Msa0883800:CDS 35.0%
!! TAAAAATTGGGGTGTCACTT+GGG + chr6_1:35675828-35675847 Msa0883800:CDS 35.0%
GAGGATATTGCAAATGCTAT+TGG + chr6_1:35675905-35675924 Msa0883800:CDS 35.0%
!! ATTGGTTTGGTGATGACAAA+TGG + chr6_1:35675923-35675942 Msa0883800:CDS 35.0%
GACAAATGGAAAAGAAGTTG+AGG + chr6_1:35675937-35675956 Msa0883800:CDS 35.0%
GGAAAGAAAGCTATACTTGT+TGG + chr6_1:35675995-35676014 Msa0883800:CDS 35.0%
! AAGAAAGCTATACTTGTTGG+TGG + chr6_1:35675998-35676017 Msa0883800:CDS 35.0%
!!! GGTATTGTGTGGAAGTATTT+TGG + chr6_1:35676164-35676183 Msa0883800:intron 35.0%
!!! GTGGAAGTATTTTGGAACTT+TGG + chr6_1:35676172-35676191 Msa0883800:intron 35.0%
GATTTCTATTCGTCTTAAGC+AGG - chr6_1:35676310-35676329 None:intergenic 35.0%
CTATACCATATACACATGCA+TGG + chr6_1:35676460-35676479 Msa0883800:CDS 35.0%
GATTTCCATGCATGTGTATA+TGG - chr6_1:35676468-35676487 None:intergenic 35.0%
GTGATGTGATATATTGACCT+CGG - chr6_1:35676534-35676553 None:intergenic 35.0%
!! AATAGCTTTTACGGTTTGGA+GGG + chr6_1:35675278-35675297 Msa0883800:CDS 35.0%
GAGCATTACAAGAATGCATT+TGG + chr6_1:35675311-35675330 Msa0883800:CDS 35.0%
! ATGCATTTGGAACAAAGTGT+TGG + chr6_1:35675324-35675343 Msa0883800:CDS 35.0%
CTTAGGACCAGTTTCATTAT+GGG + chr6_1:35675349-35675368 Msa0883800:CDS 35.0%
ACAAATGTAGAAGGAGATAG+TGG + chr6_1:35675410-35675429 Msa0883800:CDS 35.0%
GAGAACAGAATTCTCTTTCT+TGG - chr6_1:35675456-35675475 None:intergenic 35.0%
! AGAAGGTGAAGATTTTATGG+AGG + chr6_1:35675592-35675611 Msa0883800:CDS 35.0%
TCTCAAGTATCAGCAATTGT+GGG - chr6_1:35675673-35675692 None:intergenic 35.0%
TTCTCAAGTATCAGCAATTG+TGG - chr6_1:35675674-35675693 None:intergenic 35.0%
! ATAGTTGAAAGTGTGAATGC+TGG + chr6_1:35675737-35675756 Msa0883800:CDS 35.0%
! TAGTTGAAAGTGTGAATGCT+GGG + chr6_1:35675738-35675757 Msa0883800:CDS 35.0%
!! TTAAAAATTGGGGTGTCACT+TGG + chr6_1:35675827-35675846 Msa0883800:CDS 35.0%
!! TAAAAATTGGGGTGTCACTT+GGG + chr6_1:35675828-35675847 Msa0883800:CDS 35.0%
GAGGATATTGCAAATGCTAT+TGG + chr6_1:35675905-35675924 Msa0883800:CDS 35.0%
!! ATTGGTTTGGTGATGACAAA+TGG + chr6_1:35675923-35675942 Msa0883800:CDS 35.0%
GACAAATGGAAAAGAAGTTG+AGG + chr6_1:35675937-35675956 Msa0883800:CDS 35.0%
GGAAAGAAAGCTATACTTGT+TGG + chr6_1:35675995-35676014 Msa0883800:CDS 35.0%
! AAGAAAGCTATACTTGTTGG+TGG + chr6_1:35675998-35676017 Msa0883800:CDS 35.0%
!!! GGTATTGTGTGGAAGTATTT+TGG + chr6_1:35676164-35676183 Msa0883800:intron 35.0%
!!! GTGGAAGTATTTTGGAACTT+TGG + chr6_1:35676172-35676191 Msa0883800:intron 35.0%
GATTTCTATTCGTCTTAAGC+AGG - chr6_1:35676310-35676329 None:intergenic 35.0%
CTATACCATATACACATGCA+TGG + chr6_1:35676460-35676479 Msa0883800:CDS 35.0%
GATTTCCATGCATGTGTATA+TGG - chr6_1:35676468-35676487 None:intergenic 35.0%
GTGATGTGATATATTGACCT+CGG - chr6_1:35676534-35676553 None:intergenic 35.0%
!! CAATAGCTTTTACGGTTTGG+AGG + chr6_1:35675277-35675296 Msa0883800:CDS 40.0%
!! ATAGCTTTTACGGTTTGGAG+GGG + chr6_1:35675279-35675298 Msa0883800:CDS 40.0%
GCTTAGGACCAGTTTCATTA+TGG + chr6_1:35675348-35675367 Msa0883800:CDS 40.0%
! TGGTTTGCCCATAATGAAAC+TGG - chr6_1:35675359-35675378 None:intergenic 40.0%
CTGCCTTATCAGAAACATCT+TGG - chr6_1:35675379-35675398 None:intergenic 40.0%
GTTTCTGATAAGGCAGAAAG+AGG + chr6_1:35675383-35675402 Msa0883800:CDS 40.0%
AGAGGTGACACAAATGTAGA+AGG + chr6_1:35675401-35675420 Msa0883800:CDS 40.0%
AGGGTTATTTGATATGGGGT+TGG + chr6_1:35675645-35675664 Msa0883800:CDS 40.0%
GGGTTATTTGATATGGGGTT+GGG + chr6_1:35675646-35675665 Msa0883800:CDS 40.0%
CTCAAGTATCAGCAATTGTG+GGG - chr6_1:35675672-35675691 None:intergenic 40.0%
CTTGAGAACAAAGCTATTGG+AGG + chr6_1:35675686-35675705 Msa0883800:CDS 40.0%
! GAGGAATTGTGACTAGTTGT+GGG + chr6_1:35675705-35675724 Msa0883800:CDS 40.0%
AATAAAGGCCAAGTCACCAT+AGG - chr6_1:35675767-35675786 None:intergenic 40.0%
!! AAAAATTGGGGTGTCACTTG+GGG + chr6_1:35675829-35675848 Msa0883800:CDS 40.0%
! TGTCACTTGGGGTTAGAAAA+TGG + chr6_1:35675840-35675859 Msa0883800:CDS 40.0%
TAACGACATTGTGAAAAGGG+AGG + chr6_1:35675886-35675905 Msa0883800:CDS 40.0%
!! GCTAAAGCTTTGAGTGATGA+TGG + chr6_1:35675974-35675993 Msa0883800:CDS 40.0%
!! CTCAAACATCAAAGGCACTA+TGG + chr6_1:35676067-35676086 Msa0883800:CDS 40.0%
TTTGCAACAAGTCAACCTCT+TGG - chr6_1:35676219-35676238 None:intergenic 40.0%
TGTATCAAGGAACCTTCCAA+GGG - chr6_1:35676582-35676601 None:intergenic 40.0%
!! CAATAGCTTTTACGGTTTGG+AGG + chr6_1:35675277-35675296 Msa0883800:CDS 40.0%
!! ATAGCTTTTACGGTTTGGAG+GGG + chr6_1:35675279-35675298 Msa0883800:CDS 40.0%
GCTTAGGACCAGTTTCATTA+TGG + chr6_1:35675348-35675367 Msa0883800:CDS 40.0%
! TGGTTTGCCCATAATGAAAC+TGG - chr6_1:35675359-35675378 None:intergenic 40.0%
CTGCCTTATCAGAAACATCT+TGG - chr6_1:35675379-35675398 None:intergenic 40.0%
GTTTCTGATAAGGCAGAAAG+AGG + chr6_1:35675383-35675402 Msa0883800:CDS 40.0%
AGAGGTGACACAAATGTAGA+AGG + chr6_1:35675401-35675420 Msa0883800:CDS 40.0%
AGGGTTATTTGATATGGGGT+TGG + chr6_1:35675645-35675664 Msa0883800:CDS 40.0%
GGGTTATTTGATATGGGGTT+GGG + chr6_1:35675646-35675665 Msa0883800:CDS 40.0%
CTCAAGTATCAGCAATTGTG+GGG - chr6_1:35675672-35675691 None:intergenic 40.0%
CTTGAGAACAAAGCTATTGG+AGG + chr6_1:35675686-35675705 Msa0883800:CDS 40.0%
! GAGGAATTGTGACTAGTTGT+GGG + chr6_1:35675705-35675724 Msa0883800:CDS 40.0%
AATAAAGGCCAAGTCACCAT+AGG - chr6_1:35675767-35675786 None:intergenic 40.0%
!! AAAAATTGGGGTGTCACTTG+GGG + chr6_1:35675829-35675848 Msa0883800:CDS 40.0%
! TGTCACTTGGGGTTAGAAAA+TGG + chr6_1:35675840-35675859 Msa0883800:CDS 40.0%
TAACGACATTGTGAAAAGGG+AGG + chr6_1:35675886-35675905 Msa0883800:CDS 40.0%
!! GCTAAAGCTTTGAGTGATGA+TGG + chr6_1:35675974-35675993 Msa0883800:CDS 40.0%
!! CTCAAACATCAAAGGCACTA+TGG + chr6_1:35676067-35676086 Msa0883800:CDS 40.0%
TTTGCAACAAGTCAACCTCT+TGG - chr6_1:35676219-35676238 None:intergenic 40.0%
TGTATCAAGGAACCTTCCAA+GGG - chr6_1:35676582-35676601 None:intergenic 40.0%
!! TAGCTTTTACGGTTTGGAGG+GGG + chr6_1:35675280-35675299 Msa0883800:CDS 45.0%
!! GGAACAAAGTGTTGGAGCTT+AGG + chr6_1:35675332-35675351 Msa0883800:CDS 45.0%
! GGAGGAATTGTGACTAGTTG+TGG + chr6_1:35675704-35675723 Msa0883800:CDS 45.0%
! GAATTGTGACTAGTTGTGGG+TGG + chr6_1:35675708-35675727 Msa0883800:CDS 45.0%
TTCGATACGTCTCTCAACGA+CGG - chr6_1:35676504-35676523 None:intergenic 45.0%
TGAGAGACGTATCGAAACCA+TGG + chr6_1:35676508-35676527 Msa0883800:CDS 45.0%
TGATATATTGACCTCGGCCA+TGG - chr6_1:35676528-35676547 None:intergenic 45.0%
CTGTATCAAGGAACCTTCCA+AGG - chr6_1:35676583-35676602 None:intergenic 45.0%
CTTGGAAGGTTCCTTGATAC+AGG + chr6_1:35676581-35676600 Msa0883800:CDS 45.0%
!! TAGCTTTTACGGTTTGGAGG+GGG + chr6_1:35675280-35675299 Msa0883800:CDS 45.0%
!! GGAACAAAGTGTTGGAGCTT+AGG + chr6_1:35675332-35675351 Msa0883800:CDS 45.0%
! GGAGGAATTGTGACTAGTTG+TGG + chr6_1:35675704-35675723 Msa0883800:CDS 45.0%
! GAATTGTGACTAGTTGTGGG+TGG + chr6_1:35675708-35675727 Msa0883800:CDS 45.0%
TTCGATACGTCTCTCAACGA+CGG - chr6_1:35676504-35676523 None:intergenic 45.0%
TGAGAGACGTATCGAAACCA+TGG + chr6_1:35676508-35676527 Msa0883800:CDS 45.0%
TGATATATTGACCTCGGCCA+TGG - chr6_1:35676528-35676547 None:intergenic 45.0%
CTGTATCAAGGAACCTTCCA+AGG - chr6_1:35676583-35676602 None:intergenic 45.0%
CTTGGAAGGTTCCTTGATAC+AGG + chr6_1:35676581-35676600 Msa0883800:CDS 45.0%
TGTGAATGCTGGGTTGCCTA+TGG + chr6_1:35675748-35675767 Msa0883800:CDS 50.0%
TTGGAAGATTGGGCACGTAG+TGG + chr6_1:35676431-35676450 Msa0883800:intron 50.0%
ACATGCATGGAAATCCTCCC+TGG + chr6_1:35676473-35676492 Msa0883800:CDS 50.0%
ACTTACAGAAGAGGGACCCT+TGG + chr6_1:35676563-35676582 Msa0883800:CDS 50.0%
AGCAATGGCGACCTGTATCA+AGG - chr6_1:35676595-35676614 None:intergenic 50.0%
TGTGAATGCTGGGTTGCCTA+TGG + chr6_1:35675748-35675767 Msa0883800:CDS 50.0%
TTGGAAGATTGGGCACGTAG+TGG + chr6_1:35676431-35676450 Msa0883800:intron 50.0%
ACATGCATGGAAATCCTCCC+TGG + chr6_1:35676473-35676492 Msa0883800:CDS 50.0%
ACTTACAGAAGAGGGACCCT+TGG + chr6_1:35676563-35676582 Msa0883800:CDS 50.0%
AGCAATGGCGACCTGTATCA+AGG - chr6_1:35676595-35676614 None:intergenic 50.0%
CTGGGTTGCCTATGGTGACT+TGG + chr6_1:35675756-35675775 Msa0883800:CDS 55.0%
TCTCAACGACGGTCTCTCCA+GGG - chr6_1:35676493-35676512 None:intergenic 55.0%
ACGTATCGAAACCATGGCCG+AGG + chr6_1:35676514-35676533 Msa0883800:CDS 55.0%
ACAGAAGAGGGACCCTTGGA+AGG + chr6_1:35676567-35676586 Msa0883800:CDS 55.0%
CTGGGTTGCCTATGGTGACT+TGG + chr6_1:35675756-35675775 Msa0883800:CDS 55.0%
TCTCAACGACGGTCTCTCCA+GGG - chr6_1:35676493-35676512 None:intergenic 55.0%
ACGTATCGAAACCATGGCCG+AGG + chr6_1:35676514-35676533 Msa0883800:CDS 55.0%
ACAGAAGAGGGACCCTTGGA+AGG + chr6_1:35676567-35676586 Msa0883800:CDS 55.0%
! CGGTTTGGAGGGGGCTTATG+AGG + chr6_1:35675289-35675308 Msa0883800:CDS 60.0%
CTCTCAACGACGGTCTCTCC+AGG - chr6_1:35676494-35676513 None:intergenic 60.0%
! CGGTTTGGAGGGGGCTTATG+AGG + chr6_1:35675289-35675308 Msa0883800:CDS 60.0%
CTCTCAACGACGGTCTCTCC+AGG - chr6_1:35676494-35676513 None:intergenic 60.0%
CAACGACGGTCTCTCCAGGG+AGG - chr6_1:35676490-35676509 None:intergenic 65.0%
CAACGACGGTCTCTCCAGGG+AGG - chr6_1:35676490-35676509 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 35675230 35676616 35675230 ID=Msa0883800;Name=Msa0883800
chr6_1 mRNA 35675230 35676616 35675230 ID=Msa0883800-mRNA-1;Parent=Msa0883800;Name=Msa0883800-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0|0.5|1|1|2|0|345
chr6_1 exon 35675230 35676088 35675230 ID=Msa0883800-mRNA-1:exon:8559;Parent=Msa0883800-mRNA-1
chr6_1 exon 35676438 35676616 35676438 ID=Msa0883800-mRNA-1:exon:8560;Parent=Msa0883800-mRNA-1
chr6_1 CDS 35675230 35676088 35675230 ID=Msa0883800-mRNA-1:cds;Parent=Msa0883800-mRNA-1
chr6_1 CDS 35676438 35676616 35676438 ID=Msa0883800-mRNA-1:cds;Parent=Msa0883800-mRNA-1
Gene Sequence

>Msa0883800

ATGAAGGCGGTCAATAATACAAGTAGTAAAAGCTATGGTGCAGTATTCAATAGCTTTTACGGTTTGGAGGGGGCTTATGAGGAGCATTACAAGAATGCATTTGGAACAAAGTGTTGGAGCTTAGGACCAGTTTCATTATGGGCAAACCAAGATGTTTCTGATAAGGCAGAAAGAGGTGACACAAATGTAGAAGGAGATAGTGGTTTGTTTAAATGGCTTAATTCCAAGAAAGAGAATTCTGTTCTCTATGTAAGTTTTGGTAGCTTGAACAAGTTCCCATCATCTCAACTCATTGAAATAGCTCATGCACTTGAAGTATCTAGTTGTGATTTCATTTGGGTAGTTCGTAAAAGTAATGATAAAGAAGGTGAAGATTTTATGGAGGAGTTTGAGAAAAGAGTGAAAGAAAGTAATAAGGGTTATTTGATATGGGGTTGGGCCCCACAATTGCTGATACTTGAGAACAAAGCTATTGGAGGAATTGTGACTAGTTGTGGGTGGAACACAATAGTTGAAAGTGTGAATGCTGGGTTGCCTATGGTGACTTGGCCTTTATTTGCTGAGCAATTTTTTCATGAGAAATTGGTGGTTGAAGTGTTAAAAATTGGGGTGTCACTTGGGGTTAGAAAATGGAAAAATTGGAATGAGTTTGATACTAACGACATTGTGAAAAGGGAGGATATTGCAAATGCTATTGGTTTGGTGATGACAAATGGAAAAGAAGTTGAGGAGATGAGATTAAGAGCTAAAGCTTTGAGTGATGATGGAAAGAAAGCTATACTTGTTGGTGGATCTTCTCATGCAAATTTGATACAAATAATTGAGGAGCTTAAGTCACTCAAACATCAAAGGCACTATGATTGGGCACGTAGTGGCTCGTGCTATACCATATACACATGCATGGAAATCCTCCCTGGAGAGACCGTCGTTGAGAGACGTATCGAAACCATGGCCGAGGTCAATATATCACATCACATATACAAAACTTACAGAAGAGGGACCCTTGGAAGGTTCCTTGATACAGGTCGCCATTGCTAG
Protein sequence

>Msa0883800

MKAVNNTSSKSYGAVFNSFYGLEGAYEEHYKNAFGTKCWSLGPVSLWANQDVSDKAERGDTNVEGDSGLFKWLNSKKENSVLYVSFGSLNKFPSSQLIEIAHALEVSSCDFIWVVRKSNDKEGEDFMEEFEKRVKESNKGYLIWGWAPQLLILENKAIGGIVTSCGWNTIVESVNAGLPMVTWPLFAEQFFHEKLVVEVLKIGVSLGVRKWKNWNEFDTNDIVKREDIANAIGLVMTNGKEVEEMRLRAKALSDDGKKAILVGGSSHANLIQIIEELKSLKHQRHYDWARSGSCYTIYTCMEILPGETVVERRIETMAEVNISHHIYKTYRRGTLGRFLDTGRHC*