AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1259070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1259070 MtrunA17_Chr4g0058461 93.800 871 47 2 1 868 1 867 0.0 1591
Msa1259070 MtrunA17_Chr4g0058471 65.517 87 30 0 1 87 1 87 1.51e-32 124
Msa1259070 MtrunA17_Chr4g0058521 63.158 95 32 2 3 95 8 101 7.72e-24 99.0
Msa1259070 MtrunA17_Chr4g0058511 55.814 86 38 0 1 86 32 117 5.11e-18 83.6
Msa1259070 MtrunA17_Chr4g0058491 62.500 56 21 0 32 87 1 56 1.52e-15 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1259070 AT4G24690.1 57.678 267 97 6 368 622 242 504 1.78e-95 315
Msa1259070 AT4G24690.1 58.974 117 36 2 763 868 586 701 6.24e-32 133
Msa1259070 AT4G24690.1 44.444 171 80 5 3 167 6 167 1.02e-31 133

Find 281 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAGCCTCAAGCTCTTTA+AGG 0.137794 8_2:+60503816 None:intergenic
CAGGTGGAGCATTGGGATTT+TGG 0.151370 8_2:+60504230 None:intergenic
GCTGATTCAATTTCCAAAAT+TGG 0.156394 8_2:-60506109 Msa1259070:CDS
TAGAATAGACTGTCCAATTT+TGG 0.173752 8_2:+60506096 None:intergenic
GCTAGATAGTCGGTTCATTT+TGG 0.204417 8_2:-60504940 Msa1259070:CDS
GCTTTCCTTCTTCGTATCTA+TGG 0.221649 8_2:-60507340 Msa1259070:exon
TTCGCATTTCTCCATTTAAA+AGG 0.223823 8_2:-60505424 Msa1259070:CDS
TTGAAACGAGGTCCGGTTAT+TGG 0.231297 8_2:+60505329 None:intergenic
CTCCCTCTCTGTTGACTTAG+AGG 0.241946 8_2:-60504781 Msa1259070:intron
AAAATAGGTGGTGGTATCTT+TGG 0.251206 8_2:+60504999 None:intergenic
TCTCTCTCTGGACATAAATT+TGG 0.269639 8_2:-60504539 Msa1259070:CDS
AAACGAGCTTACAAATTCTT+TGG 0.275467 8_2:+60505101 None:intergenic
CATCAGCTTTAACAAAGTTT+AGG 0.277942 8_2:+60506221 None:intergenic
CATCATTTGCTTCAATGAAA+TGG 0.285825 8_2:-60505196 Msa1259070:CDS
CACAGTAGATTGTCCAGTTT+GGG 0.296918 8_2:+60505784 None:intergenic
ATAAATTTGGCCAACGTGTT+TGG 0.300638 8_2:-60504526 Msa1259070:CDS
ACCATTTGATTCACAGGTTC+AGG 0.310807 8_2:+60504211 None:intergenic
AACTCTGCGGTGTTCTTGAT+TGG 0.317579 8_2:-60503721 Msa1259070:CDS
TTCTTGGTTGCATTGTTATT+AGG 0.318324 8_2:+60505533 None:intergenic
ATTGCTTTACAGGCGAAATA+TGG 0.319387 8_2:-60506571 Msa1259070:intron
CCAAGGGAACTCAACTTGTT+TGG 0.327817 8_2:-60504827 Msa1259070:CDS
ATATGTATCTACCAGGTAAC+TGG 0.329491 8_2:+60504579 None:intergenic
TTACCCTTGTCATCACTAAC+AGG 0.332971 8_2:+60505590 None:intergenic
GAAACCTAAAGTAGGGTTCT+TGG 0.340305 8_2:+60505517 None:intergenic
ATTGCAGGGGCTGAGGCGGC+AGG 0.341825 8_2:+60504124 None:intergenic
TAAATTTGGCCAACGTGTTT+GGG 0.345801 8_2:-60504525 Msa1259070:CDS
GCAACCAAGAACCCTACTTT+AGG 0.347026 8_2:-60505521 Msa1259070:CDS
CTACTGTGAAATCCCCTTAC+TGG 0.349049 8_2:-60505769 Msa1259070:CDS
AGAGTATGTGTCCCAGAAAA+TGG 0.350776 8_2:+60505476 None:intergenic
CCAGAGAAAGAGGGAGCAGC+TGG 0.360449 8_2:+60504046 None:intergenic
TCACAGTAGATTGTCCAGTT+TGG 0.361864 8_2:+60505783 None:intergenic
CCATCTCGTGTAGCTCTTCA+AGG 0.362269 8_2:+60503690 None:intergenic
TAAGGAACAGAGGCAGGAAT+TGG 0.372232 8_2:-60504185 Msa1259070:CDS
ATCTTAACATGGCTGGGTTG+AGG 0.372436 8_2:-60506498 Msa1259070:CDS
AACATTCCCAGGAGATCTTA+AGG 0.372829 8_2:+60505916 None:intergenic
CACCAGAATGATTGATCATC+TGG 0.373848 8_2:+60506326 None:intergenic
TGATGCTTTGCAAGCTCTGC+CGG 0.380326 8_2:-60506203 Msa1259070:CDS
CCAGCTGCTCCCTCTTTCTC+TGG 0.381880 8_2:-60504046 Msa1259070:CDS
TATTCAGATATGAACATCTT+GGG 0.383029 8_2:+60505124 None:intergenic
ACTGATTCAATTTCCCAAAC+TGG 0.383587 8_2:-60505797 Msa1259070:CDS
CCTTAAAGAGCTTGAGGCTA+TGG 0.384896 8_2:-60503816 Msa1259070:CDS
CCGGCTGCTCCCTCTTTCTC+TGG 0.385339 8_2:-60503956 Msa1259070:CDS
CCGGCTGCTCCCTCTTTCTC+TGG 0.388452 8_2:-60503986 Msa1259070:CDS
CCGGCTGCTCCCTCTTTCTC+TGG 0.388452 8_2:-60504016 Msa1259070:CDS
AAGCATCAAACGTGTTGTTA+TGG 0.390196 8_2:-60503072 Msa1259070:CDS
ATCTTTGTGAATGCAGTAGA+TGG 0.397744 8_2:+60504885 None:intergenic
TACCCCATTATTGATTTCTC+TGG 0.397922 8_2:-60504076 Msa1259070:CDS
CAACGTGAGATTGGCCTTGA+GGG 0.398310 8_2:+60506071 None:intergenic
CCGGCTGGTCCCTCTTTCTC+TGG 0.402017 8_2:-60503926 Msa1259070:CDS
CTCTTTCTCTGGCGCAGCCC+CGG 0.403274 8_2:-60504035 Msa1259070:CDS
TGGTACTCTATTTACGTTAG+TGG 0.403339 8_2:+60505628 None:intergenic
CGATTGGATCTTAACATGGC+TGG 0.403836 8_2:-60506505 Msa1259070:CDS
ACAGGTTCAGGTGGAGCATT+GGG 0.405280 8_2:+60504223 None:intergenic
TGTGCCAGAGAAATCAATAA+TGG 0.405570 8_2:+60504072 None:intergenic
CAAGGCCAATCTCACGTTGC+TGG 0.405746 8_2:-60506067 Msa1259070:CDS
GTTGAAGTTTGCGGAATGGC+TGG 0.405848 8_2:+60503896 None:intergenic
ATCATTTGCTTCAATGAAAT+GGG 0.406447 8_2:-60505195 Msa1259070:CDS
CGGGGCTGCGCCAGAGAAAG+AGG 0.406658 8_2:+60504036 None:intergenic
GGAGGAACATTGAGATCAAC+CGG 0.409586 8_2:+60505668 None:intergenic
TGGAGGATGGCATCTCTCTC+TGG 0.412068 8_2:-60504551 Msa1259070:CDS
ACGTGTTTGGGTCCTTATAC+AGG 0.412921 8_2:-60504513 Msa1259070:intron
GTGCCAGAGAAATCAATAAT+GGG 0.413016 8_2:+60504073 None:intergenic
CCAGAGAAAGAGGGAGCAGC+CGG 0.413458 8_2:+60503986 None:intergenic
CCAGAGAAAGAGGGAGCAGC+CGG 0.413458 8_2:+60504016 None:intergenic
CGGGGCTGTGCCAGAGAAAG+AGG 0.415013 8_2:+60504006 None:intergenic
CCAAACAAGTTGAGTTCCCT+TGG 0.416793 8_2:+60504827 None:intergenic
ACTGTCATCCTACCTGTATA+AGG 0.417325 8_2:+60504501 None:intergenic
GCCATCCCCTTAAGATCTCC+TGG 0.418255 8_2:-60505923 Msa1259070:CDS
CCAGAGAAAGAGGGAGCAGC+CGG 0.420571 8_2:+60503956 None:intergenic
ACAAAGGTAGCTTCATTTGT+AGG 0.422052 8_2:+60504151 None:intergenic
GTTGTTATGGATTTACTCAA+TGG 0.424118 8_2:-60503059 Msa1259070:CDS
TCCTGTTTGTTTCTGTGTCA+CGG 0.426335 8_2:+60503117 None:intergenic
AGATGTTATATATGTTTAGT+TGG 0.427727 8_2:-60503013 Msa1259070:three_prime_UTR
TGTGAATCAAATGGTTGATA+AGG 0.428331 8_2:-60504203 Msa1259070:CDS
GGAACTCAACTTGTTTGGAT+TGG 0.429588 8_2:-60504822 Msa1259070:CDS
GAAGGTGACACTGAAATTGC+AGG 0.431036 8_2:+60504109 None:intergenic
TGTTTCAAATTCTGTGCTAC+AGG 0.434650 8_2:-60505882 Msa1259070:CDS
GAATAAAGAGCCTCGCGTAT+TGG 0.436479 8_2:+60506178 None:intergenic
AAAATATAGTCTGAAGTCAT+AGG 0.436772 8_2:+60502824 None:intergenic
TTCTCTGGCACATCCCCGGC+TGG 0.437116 8_2:-60503941 Msa1259070:CDS
GACTTTGCATGCTTCGAAAG+AGG 0.438676 8_2:+60504966 None:intergenic
ACTCAACTTGTTTGGATTGG+AGG 0.441260 8_2:-60504819 Msa1259070:CDS
AAAGTTAGATTCGCATCAGC+AGG 0.441418 8_2:+60506448 None:intergenic
AATTGAATCAGTGGAATTAG+AGG 0.443200 8_2:+60505808 None:intergenic
TCTTAACATGGCTGGGTTGA+GGG 0.444485 8_2:-60506497 Msa1259070:CDS
TACCACCAGCAACGTGAGAT+TGG 0.445557 8_2:+60506062 None:intergenic
CGAAATATGGAGATGCCCTC+AGG 0.446041 8_2:-60506558 Msa1259070:CDS
GGATTCTTCTCTCGTTATCA+AGG 0.446865 8_2:-60507319 Msa1259070:intron
GAGCTTGTACCAATTGCAAC+AGG 0.448357 8_2:+60505740 None:intergenic
CATTCCGCAAACTTCAACTC+TGG 0.450561 8_2:-60503891 Msa1259070:CDS
CCAGAAAATGGACAGTCAAT+AGG 0.454035 8_2:+60505488 None:intergenic
CACAGGTTCAGGTGGAGCAT+TGG 0.454919 8_2:+60504222 None:intergenic
CTCTTTCTCTGGCACAGCCC+CGG 0.456822 8_2:-60504005 Msa1259070:CDS
ACAAATGAAGCTACCTTTGT+CGG 0.458001 8_2:-60504148 Msa1259070:CDS
GTATTCAGATATGAACATCT+TGG 0.458334 8_2:+60505123 None:intergenic
TTATCAACCATTTGATTCAC+AGG 0.459634 8_2:+60504205 None:intergenic
GTCCAGATGATCAATCATTC+TGG 0.463564 8_2:-60506328 Msa1259070:CDS
CAGGTTGAGTCTAAAATTGC+GGG 0.464751 8_2:-60505698 Msa1259070:CDS
GGCTCTAGTGGAGGTGCTAG+TGG 0.465069 8_2:-60506286 Msa1259070:CDS
TTTAGGAGTGACAGATTCAC+TGG 0.467029 8_2:+60506018 None:intergenic
TCAGCAATATTTGCTAGCAC+TGG 0.467080 8_2:+60506127 None:intergenic
CCAGAGAAAGAGGGACCAGC+CGG 0.467720 8_2:+60503926 None:intergenic
ACTCTGCGGTGTTCTTGATT+GGG 0.468201 8_2:-60503720 Msa1259070:CDS
CGGGGATGTGCCAGAGAAAG+AGG 0.468555 8_2:+60503946 None:intergenic
CGGGGATGTGCCAGAGAAAG+AGG 0.468555 8_2:+60503976 None:intergenic
TGGGGCTGCGCCAGAGAAAG+AGG 0.468968 8_2:+60503916 None:intergenic
TTGGTGTTGGTAGCTCTGAA+TGG 0.475753 8_2:-60504309 Msa1259070:CDS
TGTGGAGTGTATCCAATAAC+CGG 0.475772 8_2:-60505341 Msa1259070:CDS
TACTGTGAAATCCCCTTACT+GGG 0.475999 8_2:-60505768 Msa1259070:CDS
TTGGTAGCTCTGAATGGCCT+CGG 0.477438 8_2:-60504303 Msa1259070:CDS
GCATCCAGAGTTGAAGTTTG+CGG 0.479595 8_2:+60503887 None:intergenic
CTTTAACAAAGTTTAGGAAA+GGG 0.480571 8_2:+60506227 None:intergenic
CTCTTTCTCTGGCACATCCC+CGG 0.481260 8_2:-60503945 Msa1259070:CDS
CTCTTTCTCTGGCACATCCC+CGG 0.481260 8_2:-60503975 Msa1259070:CDS
ACGAAGAAGGAAAGCGAAGA+AGG 0.482083 8_2:+60507348 None:intergenic
CTTAAAGAGCTTGAGGCTAT+GGG 0.484713 8_2:-60503815 Msa1259070:CDS
TCTGATGCTGGTGGCTCTAG+TGG 0.484789 8_2:-60506298 Msa1259070:CDS
TTGAAGTTTGCGGAATGGCT+GGG 0.486247 8_2:+60503897 None:intergenic
ACATTCCCAGGAGATCTTAA+GGG 0.486983 8_2:+60505917 None:intergenic
CTAGCATAGTCACTGGCATT+GGG 0.489217 8_2:+60505959 None:intergenic
CACTGAAATTGCAGGGGCTG+AGG 0.489264 8_2:+60504117 None:intergenic
TTTAGGAAAGGGTCTGAGAC+AGG 0.490112 8_2:+60506238 None:intergenic
TGAGGCTATGGGTTTCAAGC+AGG 0.491156 8_2:-60503804 Msa1259070:CDS
CTACTGCATTCACAAAGATC+TGG 0.496939 8_2:-60504881 Msa1259070:CDS
CAGAGAAAGAGGGACCAGCC+GGG 0.497692 8_2:+60503927 None:intergenic
TCCGTGACACAGAAACAAAC+AGG 0.498645 8_2:-60503118 Msa1259070:CDS
TCTAGCATAGTCACTGGCAT+TGG 0.500215 8_2:+60505958 None:intergenic
AAGGAACAGAGGCAGGAATT+GGG 0.502089 8_2:-60504184 Msa1259070:CDS
TATCAATGTTCAACCTATTG+AGG 0.502390 8_2:-60504272 Msa1259070:CDS
TCTGTCACTCCTAAAGCAAA+AGG 0.510808 8_2:-60506010 Msa1259070:CDS
AGATAATGATCTTGTGGAAG+AGG 0.510946 8_2:-60503843 Msa1259070:CDS
CAGAGAAAGAGGGAGCAGCC+GGG 0.511097 8_2:+60503957 None:intergenic
GCAGGTTGATTTAAACAAAG+AGG 0.511557 8_2:-60503786 Msa1259070:CDS
GGTTGATAAGGAACAGAGGC+AGG 0.513182 8_2:-60504191 Msa1259070:CDS
GAGAATGACAGATTACAATC+TGG 0.514264 8_2:-60503759 Msa1259070:CDS
CAGAGAAAGAGGGAGCAGCT+GGG 0.514876 8_2:+60504047 None:intergenic
TTGCAGGGGCTGAGGCGGCA+GGG 0.515093 8_2:+60504125 None:intergenic
AGAGCCTCGCGTATTGGCTC+CGG 0.515321 8_2:+60506184 None:intergenic
ATTTACGTTAGTGGATGAGT+AGG 0.515638 8_2:+60505637 None:intergenic
CAGAGAAAGAGGGAGCAGCC+GGG 0.516324 8_2:+60503987 None:intergenic
CAGAGAAAGAGGGAGCAGCC+GGG 0.516324 8_2:+60504017 None:intergenic
ACGTCAAGCTCTTTCTCTAC+AGG 0.519273 8_2:+60504623 None:intergenic
GATTGGATCTTAACATGGCT+GGG 0.519526 8_2:-60506504 Msa1259070:CDS
AGACAGGAGGATATGTCAAA+GGG 0.520390 8_2:+60506254 None:intergenic
AAGAAGAAGCTTTAGCGTAC+CGG 0.520617 8_2:+60507478 None:intergenic
TAGCGTTAATAGCGGCTCAC+CGG 0.521967 8_2:-60507497 Msa1259070:five_prime_UTR
TAAAATTGCGGGAGTTTCCC+CGG 0.522427 8_2:-60505687 Msa1259070:CDS
GTGGATGAGTAGGGATTGCA+TGG 0.522591 8_2:+60505647 None:intergenic
GGAACTTGTCTCGAAGATGC+AGG 0.522795 8_2:+60505830 None:intergenic
CATTCAATGCCACCTCCTCT+AGG 0.523514 8_2:-60505452 Msa1259070:CDS
TGAAATTGCAGGGGCTGAGG+CGG 0.524012 8_2:+60504120 None:intergenic
GGATTTACTCAATGGAGAGT+AGG 0.524594 8_2:-60503051 Msa1259070:exon
TTTGGATTTGAAACGAGGTC+CGG 0.524974 8_2:+60505322 None:intergenic
ACCTGAACCTGTGAATCAAA+TGG 0.525429 8_2:-60504212 Msa1259070:CDS
TTTAGAGCGCCCCAGTTACC+TGG 0.526761 8_2:-60504590 Msa1259070:CDS
GCTCACTCTGATGCATTGAA+TGG 0.527413 8_2:-60505395 Msa1259070:CDS
TTGAATATTCCCCTTGGTGT+TGG 0.532493 8_2:-60504322 Msa1259070:CDS
TTTACGTTAGTGGATGAGTA+GGG 0.532938 8_2:+60505638 None:intergenic
GCTTTAACAAAGTTTAGGAA+AGG 0.533743 8_2:+60506226 None:intergenic
GGAGCACTGAAACCTAAAGT+AGG 0.534494 8_2:+60505509 None:intergenic
CTGGTAGATACATATCATAC+TGG 0.536570 8_2:-60504571 Msa1259070:CDS
AAGCACAGATAATGATCTTG+TGG 0.539260 8_2:-60503849 Msa1259070:CDS
TTTAGACTCAACCTGTCGAC+TGG 0.539536 8_2:+60505706 None:intergenic
TGTCATAGACGGAACAATGA+TGG 0.540855 8_2:-60504910 Msa1259070:CDS
CGAAAGTTTCCTAGAGGAGG+TGG 0.541922 8_2:+60505443 None:intergenic
AGAATCCATAGATACGAAGA+AGG 0.548262 8_2:+60507335 None:intergenic
CAAACAAGTTGAGTTCCCTT+GGG 0.548283 8_2:+60504828 None:intergenic
AGAGAAAGAGGGAGCAGCCG+GGG 0.548629 8_2:+60503958 None:intergenic
AGAGAAAGAGGGAGCAGCCG+GGG 0.548629 8_2:+60503988 None:intergenic
AGAGAAAGAGGGAGCAGCCG+GGG 0.548629 8_2:+60504018 None:intergenic
TTGGATGTTAATGTCATAGA+CGG 0.549049 8_2:-60504921 Msa1259070:CDS
TCAGATTGATTATATCAGAA+TGG 0.550265 8_2:-60505169 Msa1259070:CDS
CACGAACATTGAAGCGCCTG+AGG 0.551408 8_2:+60506542 None:intergenic
AGAGAAAGAGGGACCAGCCG+GGG 0.554370 8_2:+60503928 None:intergenic
TCTGGTGCTAAATCTGATGC+TGG 0.555805 8_2:-60506310 Msa1259070:CDS
GGTTGCAAATCAAGATAGAA+TGG 0.556980 8_2:+60502776 None:intergenic
TGAAGTTTGCGGAATGGCTG+GGG 0.557993 8_2:+60503898 None:intergenic
CAGTATGATATGTATCTACC+AGG 0.558081 8_2:+60504572 None:intergenic
TATGTATCTACCAGGTAACT+GGG 0.559766 8_2:+60504580 None:intergenic
ATCTGGCGGATGCGCAACAA+TGG 0.559803 8_2:-60504864 Msa1259070:CDS
TCTACAGGTACACCGTCCTC+AGG 0.560554 8_2:+60504638 None:intergenic
AGAGAAAGAGGGAGCAGCTG+GGG 0.560636 8_2:+60504048 None:intergenic
CAGAGTTGAAGTTTGCGGAA+TGG 0.561176 8_2:+60503892 None:intergenic
CCTTGAAGAGCTACACGAGA+TGG 0.562183 8_2:-60503690 Msa1259070:intron
TTCAAATTCTGTGCTACAGG+AGG 0.562592 8_2:-60505879 Msa1259070:CDS
CCCAGGAGATCTTAAGGGGA+TGG 0.564848 8_2:+60505922 None:intergenic
TTGAGATATGTTGATGAGGA+TGG 0.568310 8_2:-60506427 Msa1259070:CDS
TCTTTATTCGTCATTTGCAA+AGG 0.570245 8_2:-60506164 Msa1259070:CDS
GCAACGTGAGATTGGCCTTG+AGG 0.571363 8_2:+60506070 None:intergenic
GGCACTTCAGTGTGGCCCAA+GGG 0.572964 8_2:-60504843 Msa1259070:CDS
TGTGGATGAGAATAATCGAT+TGG 0.573157 8_2:-60506521 Msa1259070:CDS
CTAACAGGGACTGCTGATGA+AGG 0.574980 8_2:+60505605 None:intergenic
AGTGACTATGCTAGATCTAG+TGG 0.575122 8_2:-60505950 Msa1259070:CDS
GAGACAGGAGGATATGTCAA+AGG 0.575364 8_2:+60506253 None:intergenic
GAGCACTGAAACCTAAAGTA+GGG 0.576966 8_2:+60505510 None:intergenic
GGCTCTCCTTAAAGAGCTTG+AGG 0.577007 8_2:-60503822 Msa1259070:CDS
ATTGAATGGCATGTTTCACA+AGG 0.578053 8_2:-60505381 Msa1259070:CDS
CACACTTTGGATTTGAAACG+AGG 0.578382 8_2:+60505317 None:intergenic
AAGGTGACACTGAAATTGCA+GGG 0.578453 8_2:+60504110 None:intergenic
CTGAACTTGAATATTCCCCT+TGG 0.578935 8_2:-60504328 Msa1259070:CDS
ATTTGATTCACAGGTTCAGG+TGG 0.578969 8_2:+60504214 None:intergenic
GGGGCTGCGCCAGAGAAAGA+GGG 0.579540 8_2:+60504037 None:intergenic
GGGGTCCGTTGTGATGGTTG+TGG 0.582288 8_2:-60505359 Msa1259070:CDS
TGTTGATGAGGATGGCGACT+TGG 0.583892 8_2:-60506419 Msa1259070:CDS
TGAGGCGGCAGGGCCGACAA+AGG 0.585780 8_2:+60504135 None:intergenic
TGGCACTTCAGTGTGGCCCA+AGG 0.586891 8_2:-60504844 Msa1259070:CDS
GAAGGTCGATGCATCTCTCA+AGG 0.588481 8_2:-60504377 Msa1259070:intron
AGTTTGGGAAATTGAATCAG+TGG 0.589643 8_2:+60505799 None:intergenic
TTGAATATCCCAGGTTCCTG+AGG 0.592600 8_2:-60504654 Msa1259070:intron
CTTGGGGAACGAAAAGATGC+AGG 0.597899 8_2:+60505141 None:intergenic
CAGTCTATTCTAAACCCTCA+AGG 0.600178 8_2:-60506085 Msa1259070:CDS
AACCTCTAAGTCAACAGAGA+GGG 0.600363 8_2:+60504779 None:intergenic
TGGCGACTTGGTGAATCTTG+TGG 0.604928 8_2:-60506407 Msa1259070:CDS
GGGGCTGTGCCAGAGAAAGA+GGG 0.605166 8_2:+60504007 None:intergenic
GGGGATGTGCCAGAGAAAGA+GGG 0.605312 8_2:+60503947 None:intergenic
GGGGATGTGCCAGAGAAAGA+GGG 0.605312 8_2:+60503977 None:intergenic
ACAGGTTGAGTCTAAAATTG+CGG 0.605495 8_2:-60505699 Msa1259070:CDS
CCATCCCCTTAAGATCTCCT+GGG 0.605783 8_2:-60505922 Msa1259070:CDS
CTGTGAAATCCCCTTACTGG+GGG 0.606740 8_2:-60505766 Msa1259070:CDS
CATTCCCAGGAGATCTTAAG+GGG 0.607259 8_2:+60505918 None:intergenic
GGGGCTGCGCCAGAGAAAGA+GGG 0.607968 8_2:+60503917 None:intergenic
AGTCCCTGTTAGTGATGACA+AGG 0.614739 8_2:-60505594 Msa1259070:CDS
AGGTCCGCAGTCTCCATGTG+TGG 0.614993 8_2:-60505990 Msa1259070:CDS
ATTGAATCAGTGGAATTAGA+GGG 0.618823 8_2:+60505809 None:intergenic
GGCCAATCTCACGTTGCTGG+TGG 0.619129 8_2:-60506064 Msa1259070:CDS
GATGCTGGTGGCTCTAGTGG+AGG 0.620357 8_2:-60506295 Msa1259070:CDS
ACTAGATCTAGCATAGTCAC+TGG 0.623545 8_2:+60505952 None:intergenic
TTCAGAGCTACCAACACCAA+GGG 0.624349 8_2:+60504312 None:intergenic
TGAATGGCATGTTTCACAAG+GGG 0.625755 8_2:-60505379 Msa1259070:CDS
CAGGCGCTTCAATGTTCGTG+TGG 0.626475 8_2:-60506539 Msa1259070:CDS
CTGCATTCACAAAGATCTGG+CGG 0.628230 8_2:-60504878 Msa1259070:CDS
TAATCGATTGGATCTTAACA+TGG 0.630522 8_2:-60506509 Msa1259070:CDS
ATTCAGATATGAACATCTTG+GGG 0.630633 8_2:+60505125 None:intergenic
ATATCCCAGGTTCCTGAGGA+CGG 0.631323 8_2:-60504650 Msa1259070:intron
ATACATATCATACTGGAGGA+TGG 0.631704 8_2:-60504564 Msa1259070:CDS
ATGCGAAAGTTTCCTAGAGG+AGG 0.632193 8_2:+60505440 None:intergenic
GCTATTAACGCTAAATGAAG+CGG 0.635016 8_2:+60507507 None:intergenic
TTGAATGGCATGTTTCACAA+GGG 0.637056 8_2:-60505380 Msa1259070:CDS
TCGTGTAGCTCTTCAAGGAG+AGG 0.639515 8_2:+60503695 None:intergenic
AACTTTGAGATATGTTGATG+AGG 0.640200 8_2:-60506431 Msa1259070:CDS
CTTGTACCAATTGCAACAGG+AGG 0.643181 8_2:+60505743 None:intergenic
GTAGATACATATCATACTGG+AGG 0.647336 8_2:-60504568 Msa1259070:CDS
TCAATGCATCAGAGTGAGCG+TGG 0.647531 8_2:+60505399 None:intergenic
TAAATCGTCTATTGATGACA+AGG 0.648030 8_2:-60505570 Msa1259070:CDS
TACCCTTGTCATCACTAACA+GGG 0.648629 8_2:+60505591 None:intergenic
AACACTAAATAATCGCTGCT+AGG 0.648861 8_2:-60502974 Msa1259070:three_prime_UTR
CAAAGTCTAAGCTAGATAGT+CGG 0.651873 8_2:-60504950 Msa1259070:CDS
GGTGCTAAATCTGATGCTGG+TGG 0.654255 8_2:-60506307 Msa1259070:CDS
ATGGGGTAAGAAATAGACGA+AGG 0.654909 8_2:+60504091 None:intergenic
GAGGAACATTGAGATCAACC+GGG 0.658453 8_2:+60505669 None:intergenic
GCTTCATTTAGCGTTAATAG+CGG 0.661723 8_2:-60507505 Msa1259070:five_prime_UTR
AAGTTAGATTCGCATCAGCA+GGG 0.661745 8_2:+60506449 None:intergenic
ACGAACATTGAAGCGCCTGA+GGG 0.664144 8_2:+60506543 None:intergenic
TGCCAGAGAAATCAATAATG+GGG 0.667959 8_2:+60504074 None:intergenic
ACAGGGACTGCTGATGAAGG+TGG 0.672158 8_2:+60505608 None:intergenic
ATTCAGAGCTACCAACACCA+AGG 0.681533 8_2:+60504311 None:intergenic
AGGAAAGGGTCTGAGACAGG+AGG 0.683595 8_2:+60506241 None:intergenic
AAATGGTTGATAAGGAACAG+AGG 0.684433 8_2:-60504195 Msa1259070:CDS
GAATCCACACATGGAGACTG+CGG 0.686458 8_2:+60505986 None:intergenic
TTAGGAGTGACAGATTCACT+GGG 0.687144 8_2:+60506019 None:intergenic
AGGAGGATATGTCAAAGGGG+TGG 0.690825 8_2:+60506258 None:intergenic
GCAACAATGGCACTTCAGTG+TGG 0.692755 8_2:-60504851 Msa1259070:CDS
AAATCGTCTATTGATGACAA+GGG 0.693123 8_2:-60505569 Msa1259070:CDS
ACATTGATATCTATAATCCG+AGG 0.697429 8_2:+60504286 None:intergenic
AAACCTCTAAGTCAACAGAG+AGG 0.699177 8_2:+60504778 None:intergenic
TTGGGAGCAGAATCCACACA+TGG 0.699336 8_2:+60505977 None:intergenic
ACTGTGAAATCCCCTTACTG+GGG 0.699540 8_2:-60505767 Msa1259070:CDS
AGGTGACACTGAAATTGCAG+GGG 0.705414 8_2:+60504111 None:intergenic
GAATGGCATGTTTCACAAGG+GGG 0.707414 8_2:-60505378 Msa1259070:CDS
TCAGAGCTACCAACACCAAG+GGG 0.709272 8_2:+60504313 None:intergenic
GATGAGTAGGGATTGCATGG+AGG 0.713033 8_2:+60505650 None:intergenic
GGGAACGAAAAGATGCAGGA+CGG 0.713231 8_2:+60505145 None:intergenic
GAAATGCGAAAGTTTCCTAG+AGG 0.713272 8_2:+60505437 None:intergenic
ACACTCCACAACCATCACAA+CGG 0.720187 8_2:+60505354 None:intergenic
GTCCCTGTTAGTGATGACAA+GGG 0.724027 8_2:-60505593 Msa1259070:CDS
ATGTATCTACCAGGTAACTG+GGG 0.725191 8_2:+60504581 None:intergenic
AGGAACATTGAGATCAACCG+GGG 0.730566 8_2:+60505670 None:intergenic
CAGTCAATTGATGAACTCTG+CGG 0.730626 8_2:-60503734 Msa1259070:CDS
GACAGGAGGATATGTCAAAG+GGG 0.732984 8_2:+60506255 None:intergenic
GTATAAGGACCCAAACACGT+TGG 0.738449 8_2:+60504516 None:intergenic
GTGACACAGAAACAAACAGG+AGG 0.742203 8_2:-60503115 Msa1259070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATATTTTTTATTATTA+CGG - chr8_2:60503496-60503515 Msa1259070:intron 0.0%
!!! ATTTAGTTTATTTTTTCATT+TGG - chr8_2:60506651-60506670 Msa1259070:intron 10.0%
!! AATTAATTAAGTAAATCAAA+AGG - chr8_2:60506697-60506716 Msa1259070:intron 10.0%
!! CAAAATAATGAAACATAAAT+TGG + chr8_2:60503031-60503050 None:intergenic 15.0%
!!! CAATTTATGTTTCATTATTT+TGG - chr8_2:60503029-60503048 Msa1259070:three_prime_UTR 15.0%
!!! GATTATATTGTTTTCAATAT+TGG - chr8_2:60503176-60503195 Msa1259070:intron 15.0%
!! TATCAAAACAATAAAACTAA+GGG + chr8_2:60503262-60503281 None:intergenic 15.0%
!! TTATCAAAACAATAAAACTA+AGG + chr8_2:60503263-60503282 None:intergenic 15.0%
!! TTACATCTTTACATATAAAA+TGG - chr8_2:60503672-60503691 Msa1259070:intron 15.0%
!! AAGAATATTATTAAACCATT+AGG + chr8_2:60505873-60505892 None:intergenic 15.0%
!! AACATAAATTGGAAAAAGAA+GGG + chr8_2:60503020-60503039 None:intergenic 20.0%
!! AAACATAAATTGGAAAAAGA+AGG + chr8_2:60503021-60503040 None:intergenic 20.0%
!!! GGTTCAATATTAGTTTATTA+GGG - chr8_2:60503517-60503536 Msa1259070:intron 20.0%
!!! GTTCAATATTAGTTTATTAG+GGG - chr8_2:60503518-60503537 Msa1259070:intron 20.0%
!! AAATAAATTCCAATGAAATG+TGG + chr8_2:60503617-60503636 None:intergenic 20.0%
!!! TATTTTAAAATGCTGCTTTT+AGG - chr8_2:60505020-60505039 Msa1259070:intron 20.0%
!!! ATTTTAAAATGCTGCTTTTA+GGG - chr8_2:60505021-60505040 Msa1259070:intron 20.0%
!! TTCAAACAAAATATCAGATA+GGG + chr8_2:60505623-60505642 None:intergenic 20.0%
!! ATTCAAACAAAATATCAGAT+AGG + chr8_2:60505624-60505643 None:intergenic 20.0%
!! TTTGAGTCAAAAATTTATAC+AGG + chr8_2:60505837-60505856 None:intergenic 20.0%
!!! TTAATGTTTAAAATTGCACT+GGG + chr8_2:60506743-60506762 None:intergenic 20.0%
!!! TTTTACTTTTTGTTACAAGA+GGG + chr8_2:60506818-60506837 None:intergenic 20.0%
!!! ATTTTACTTTTTGTTACAAG+AGG + chr8_2:60506819-60506838 None:intergenic 20.0%
!! CTTGTAACAAAAAGTAAAAT+AGG - chr8_2:60506819-60506838 Msa1259070:intron 20.0%
!! TAAAGAATTTGTATCATAAC+AGG + chr8_2:60506861-60506880 None:intergenic 20.0%
!!! AGTACGAAATTTTATTGATT+AGG + chr8_2:60506909-60506928 None:intergenic 20.0%
!! AGATGTTATATATGTTTAGT+TGG - chr8_2:60507279-60507298 Msa1259070:intron 20.0%
!! AGCAAATTTTCATTCTGTTA+GGG - chr8_2:60502866-60502885 Msa1259070:three_prime_UTR 25.0%
! ACATAAATTGGAAAAAGAAG+GGG + chr8_2:60503019-60503038 None:intergenic 25.0%
!! TAATCGTTATGATTTTGTGA+CGG - chr8_2:60503131-60503150 Msa1259070:intron 25.0%
!!! TTGTTTTGATAATCAGAACA+AGG - chr8_2:60503271-60503290 Msa1259070:intron 25.0%
! TTTACTCCTAACATGATAAT+CGG - chr8_2:60503387-60503406 Msa1259070:intron 25.0%
! ATAAATCCGATTATCATGTT+AGG + chr8_2:60503396-60503415 None:intergenic 25.0%
! AACATGATAATCGGATTTAT+TGG - chr8_2:60503396-60503415 Msa1259070:intron 25.0%
!! CGGTTCAATATTAGTTTATT+AGG - chr8_2:60503516-60503535 Msa1259070:intron 25.0%
! ATCTTTACATATAAAATGGC+CGG - chr8_2:60503676-60503695 Msa1259070:intron 25.0%
! GTCATTTATTATTGCTTTAC+AGG - chr8_2:60503711-60503730 Msa1259070:CDS 25.0%
! CTTTAACAAAGTTTAGGAAA+GGG + chr8_2:60504068-60504087 None:intergenic 25.0%
!! TAGTTTTCTTTTCTGCATAA+TGG + chr8_2:60505067-60505086 None:intergenic 25.0%
! ATCATTTGCTTCAATGAAAT+GGG - chr8_2:60505097-60505116 Msa1259070:intron 25.0%
! TCAGATTGATTATATCAGAA+TGG - chr8_2:60505123-60505142 Msa1259070:CDS 25.0%
! TATTCAGATATGAACATCTT+GGG + chr8_2:60505171-60505190 None:intergenic 25.0%
!! TTTATACCTTCTCTCTTTTA+TGG - chr8_2:60505259-60505278 Msa1259070:intron 25.0%
!!! ATATTTTGTTTGAATATCCC+AGG - chr8_2:60505629-60505648 Msa1259070:CDS 25.0%
!! AAACACATTTTTCTTCCTAA+TGG - chr8_2:60505855-60505874 Msa1259070:CDS 25.0%
!! CTTAATGTTTAAAATTGCAC+TGG + chr8_2:60506744-60506763 None:intergenic 25.0%
!! TTATGAAAGTTGATCTCATA+AGG + chr8_2:60506959-60506978 None:intergenic 25.0%
! AATAAAAGCAACACATTCAT+TGG + chr8_2:60507063-60507082 None:intergenic 25.0%
!!! TGTTGCTTTTATTGTTCTTT+TGG - chr8_2:60507070-60507089 Msa1259070:intron 25.0%
! AATAAAAGCAACACATTCAT+TGG + chr8_2:60507063-60507082 None:intergenic 25.0%
!!! TTTTTTGCTTAATGACTGAT+GGG - chr8_2:60507135-60507154 Msa1259070:intron 25.0%
!! AAAATATAGTCTGAAGTCAT+AGG + chr8_2:60507471-60507490 None:intergenic 25.0%
! CAGCAAATTTTCATTCTGTT+AGG - chr8_2:60502865-60502884 Msa1259070:three_prime_UTR 30.0%
! ATTTTCATTCTGTTAGGGTT+AGG - chr8_2:60502871-60502890 Msa1259070:three_prime_UTR 30.0%
! TTTTCATTCTGTTAGGGTTA+GGG - chr8_2:60502872-60502891 Msa1259070:three_prime_UTR 30.0%
!!! ATTTTTGTTGTTTCATGCAC+TGG - chr8_2:60503072-60503091 Msa1259070:CDS 30.0%
AAATTGTTGAATTGCTAGTG+AGG - chr8_2:60503303-60503322 Msa1259070:intron 30.0%
!!! AATTTTTTTGCACTAGAACG+TGG - chr8_2:60503349-60503368 Msa1259070:intron 30.0%
!!! ATTTTTTTGCACTAGAACGT+GGG - chr8_2:60503350-60503369 Msa1259070:intron 30.0%
ATATTCTCAATCATGGGATA+AGG + chr8_2:60503469-60503488 None:intergenic 30.0%
TTATCCCATGATTGAGAATA+TGG - chr8_2:60503468-60503487 Msa1259070:intron 30.0%
CTATCCATATTCTCAATCAT+GGG + chr8_2:60503475-60503494 None:intergenic 30.0%
ACTATCCATATTCTCAATCA+TGG + chr8_2:60503476-60503495 None:intergenic 30.0%
! AGTTTATTAGGGGTATATGT+TGG - chr8_2:60503528-60503547 Msa1259070:intron 30.0%
TATATGTTGGATTGAAGACA+AGG - chr8_2:60503541-60503560 Msa1259070:intron 30.0%
AAATGACATGATATGAAGTC+CGG + chr8_2:60503698-60503717 None:intergenic 30.0%
TAATCGATTGGATCTTAACA+TGG - chr8_2:60503783-60503802 Msa1259070:CDS 30.0%
!! AACTTTGAGATATGTTGATG+AGG - chr8_2:60503861-60503880 Msa1259070:CDS 30.0%
GCTTTAACAAAGTTTAGGAA+AGG + chr8_2:60504069-60504088 None:intergenic 30.0%
! CATCAGCTTTAACAAAGTTT+AGG + chr8_2:60504074-60504093 None:intergenic 30.0%
TCTTTATTCGTCATTTGCAA+AGG - chr8_2:60504128-60504147 Msa1259070:CDS 30.0%
! GCTGATTCAATTTCCAAAAT+TGG - chr8_2:60504183-60504202 Msa1259070:CDS 30.0%
! TAGAATAGACTGTCCAATTT+TGG + chr8_2:60504199-60504218 None:intergenic 30.0%
!!! TTAGTTTTAACAACATTCCC+AGG + chr8_2:60504390-60504409 None:intergenic 30.0%
ATTGAATCAGTGGAATTAGA+GGG + chr8_2:60504486-60504505 None:intergenic 30.0%
AATTGAATCAGTGGAATTAG+AGG + chr8_2:60504487-60504506 None:intergenic 30.0%
! TAAATCGTCTATTGATGACA+AGG - chr8_2:60504722-60504741 Msa1259070:intron 30.0%
! AAATCGTCTATTGATGACAA+GGG - chr8_2:60504723-60504742 Msa1259070:intron 30.0%
! TTCTTGGTTGCATTGTTATT+AGG + chr8_2:60504762-60504781 None:intergenic 30.0%
TTCGCATTTCTCCATTTAAA+AGG - chr8_2:60504868-60504887 Msa1259070:CDS 30.0%
CATCATTTGCTTCAATGAAA+TGG - chr8_2:60505096-60505115 Msa1259070:intron 30.0%
ATTCAGATATGAACATCTTG+GGG + chr8_2:60505170-60505189 None:intergenic 30.0%
GTATTCAGATATGAACATCT+TGG + chr8_2:60505172-60505191 None:intergenic 30.0%
AAACGAGCTTACAAATTCTT+TGG + chr8_2:60505194-60505213 None:intergenic 30.0%
!!! AGAGGTCCTGTTTTAAAAAT+AGG + chr8_2:60505311-60505330 None:intergenic 30.0%
TTGGATGTTAATGTCATAGA+CGG - chr8_2:60505371-60505390 Msa1259070:CDS 30.0%
!! AATTTAATTAGCCTTTCCCT+AGG - chr8_2:60505569-60505588 Msa1259070:CDS 30.0%
ACATTGATATCTATAATCCG+AGG + chr8_2:60506009-60506028 None:intergenic 30.0%
TATCAATGTTCAACCTATTG+AGG - chr8_2:60506020-60506039 Msa1259070:CDS 30.0%
TGAAAAACATCATCCTCAAT+AGG + chr8_2:60506036-60506055 None:intergenic 30.0%
TTATCAACCATTTGATTCAC+AGG + chr8_2:60506090-60506109 None:intergenic 30.0%
! TGTGAATCAAATGGTTGATA+AGG - chr8_2:60506089-60506108 Msa1259070:CDS 30.0%
!!! TACGCTTCATGTTTTAATTG+TGG + chr8_2:60506786-60506805 None:intergenic 30.0%
!!! GTGTTGCTTTTATTGTTTTG+TGG - chr8_2:60507108-60507127 Msa1259070:intron 30.0%
!!! CTTTTTTGCTTAATGACTGA+TGG - chr8_2:60507134-60507153 Msa1259070:intron 30.0%
! TTTTTGCTTAATGACTGATG+GGG - chr8_2:60507136-60507155 Msa1259070:intron 30.0%
GTTGTTATGGATTTACTCAA+TGG - chr8_2:60507233-60507252 Msa1259070:intron 30.0%
!!! GAGAGTAGGTTTTAATTACA+TGG - chr8_2:60507255-60507274 Msa1259070:intron 30.0%
CATTCATGAGAAAAAAAGGT+TGG + chr8_2:60507540-60507559 None:intergenic 30.0%
GCTATTAACGCTAAATGAAG+CGG + chr8_2:60502788-60502807 None:intergenic 35.0%
GCTTCATTTAGCGTTAATAG+CGG - chr8_2:60502787-60502806 Msa1259070:three_prime_UTR 35.0%
AGAATCCATAGATACGAAGA+AGG + chr8_2:60502960-60502979 None:intergenic 35.0%
! GGTTAATTAGGTTTTGCATG+TGG - chr8_2:60503099-60503118 Msa1259070:CDS 35.0%
! ACACTCCTAATTGAAGGTTT+TGG - chr8_2:60503434-60503453 Msa1259070:intron 35.0%
CCTAACCAAAACCTTCAATT+AGG + chr8_2:60503442-60503461 None:intergenic 35.0%
!!! CCTAATTGAAGGTTTTGGTT+AGG - chr8_2:60503439-60503458 Msa1259070:intron 35.0%
!! AAGGATCCAGTAGGTTTTAT+TGG - chr8_2:60503560-60503579 Msa1259070:intron 35.0%
ATCACACCAATAAAACCTAC+TGG + chr8_2:60503569-60503588 None:intergenic 35.0%
GATGTCTATCCACATTTCAT+TGG - chr8_2:60503605-60503624 Msa1259070:intron 35.0%
ATTGCTTTACAGGCGAAATA+TGG - chr8_2:60503721-60503740 Msa1259070:CDS 35.0%
TGTGGATGAGAATAATCGAT+TGG - chr8_2:60503771-60503790 Msa1259070:CDS 35.0%
! TTGAGATATGTTGATGAGGA+TGG - chr8_2:60503865-60503884 Msa1259070:CDS 35.0%
TGTTTCAAATTCTGTGCTAC+AGG - chr8_2:60504410-60504429 Msa1259070:intron 35.0%
AGTTTGGGAAATTGAATCAG+TGG + chr8_2:60504496-60504515 None:intergenic 35.0%
! ACTGATTCAATTTCCCAAAC+TGG - chr8_2:60504495-60504514 Msa1259070:intron 35.0%
! ACAGGTTGAGTCTAAAATTG+CGG - chr8_2:60504593-60504612 Msa1259070:CDS 35.0%
! TTTACGTTAGTGGATGAGTA+GGG + chr8_2:60504657-60504676 None:intergenic 35.0%
! ATTTACGTTAGTGGATGAGT+AGG + chr8_2:60504658-60504677 None:intergenic 35.0%
TGGTACTCTATTTACGTTAG+TGG + chr8_2:60504667-60504686 None:intergenic 35.0%
!! CTATTGACTGTCCATTTTCT+GGG - chr8_2:60504805-60504824 Msa1259070:CDS 35.0%
ATTGAATGGCATGTTTCACA+AGG - chr8_2:60504911-60504930 Msa1259070:CDS 35.0%
TTGAATGGCATGTTTCACAA+GGG - chr8_2:60504912-60504931 Msa1259070:CDS 35.0%
! AAAGAAGTGTACTCACACTT+TGG + chr8_2:60504991-60505010 None:intergenic 35.0%
! AAAATAGGTGGTGGTATCTT+TGG + chr8_2:60505296-60505315 None:intergenic 35.0%
!!! CCTGTTTTAAAAATAGGTGG+TGG + chr8_2:60505305-60505324 None:intergenic 35.0%
!!! CCACCACCTATTTTTAAAAC+AGG - chr8_2:60505302-60505321 Msa1259070:intron 35.0%
!!! GGTCCTGTTTTAAAAATAGG+TGG + chr8_2:60505308-60505327 None:intergenic 35.0%
CAAAGTCTAAGCTAGATAGT+CGG - chr8_2:60505342-60505361 Msa1259070:CDS 35.0%
ATCTTTGTGAATGCAGTAGA+TGG + chr8_2:60505410-60505429 None:intergenic 35.0%
CAACAGGTAAAACAAACCTA+GGG + chr8_2:60505588-60505607 None:intergenic 35.0%
TCAACAGGTAAAACAAACCT+AGG + chr8_2:60505589-60505608 None:intergenic 35.0%
TATGTATCTACCAGGTAACT+GGG + chr8_2:60505715-60505734 None:intergenic 35.0%
ATATGTATCTACCAGGTAAC+TGG + chr8_2:60505716-60505735 None:intergenic 35.0%
CAGTATGATATGTATCTACC+AGG + chr8_2:60505723-60505742 None:intergenic 35.0%
CTGGTAGATACATATCATAC+TGG - chr8_2:60505721-60505740 Msa1259070:CDS 35.0%
GTAGATACATATCATACTGG+AGG - chr8_2:60505724-60505743 Msa1259070:CDS 35.0%
ATACATATCATACTGGAGGA+TGG - chr8_2:60505728-60505747 Msa1259070:CDS 35.0%
TCTCTCTCTGGACATAAATT+TGG - chr8_2:60505753-60505772 Msa1259070:CDS 35.0%
ATAAATTTGGCCAACGTGTT+TGG - chr8_2:60505766-60505785 Msa1259070:CDS 35.0%
TAAATTTGGCCAACGTGTTT+GGG - chr8_2:60505767-60505786 Msa1259070:CDS 35.0%
!! TCAAGTATGATAGTGGAAGA+GGG + chr8_2:60505897-60505916 None:intergenic 35.0%
!! TTCAAGTATGATAGTGGAAG+AGG + chr8_2:60505898-60505917 None:intergenic 35.0%
TCTTCCACTATCATACTTGA+AGG - chr8_2:60505897-60505916 Msa1259070:CDS 35.0%
! TCATTTTATGATAGCTCGCA+AGG - chr8_2:60505940-60505959 Msa1259070:CDS 35.0%
!! AAATGGTTGATAAGGAACAG+AGG - chr8_2:60506097-60506116 Msa1259070:CDS 35.0%
ACAAAGGTAGCTTCATTTGT+AGG + chr8_2:60506144-60506163 None:intergenic 35.0%
ACAAATGAAGCTACCTTTGT+CGG - chr8_2:60506144-60506163 Msa1259070:CDS 35.0%
!! TACCCCATTATTGATTTCTC+TGG - chr8_2:60506216-60506235 Msa1259070:CDS 35.0%
TGCCAGAGAAATCAATAATG+GGG + chr8_2:60506221-60506240 None:intergenic 35.0%
GTGCCAGAGAAATCAATAAT+GGG + chr8_2:60506222-60506241 None:intergenic 35.0%
TGTGCCAGAGAAATCAATAA+TGG + chr8_2:60506223-60506242 None:intergenic 35.0%
AAGCACAGATAATGATCTTG+TGG - chr8_2:60506443-60506462 Msa1259070:CDS 35.0%
AGATAATGATCTTGTGGAAG+AGG - chr8_2:60506449-60506468 Msa1259070:CDS 35.0%
!! GCAGGTTGATTTAAACAAAG+AGG - chr8_2:60506506-60506525 Msa1259070:CDS 35.0%
GAGAATGACAGATTACAATC+TGG - chr8_2:60506533-60506552 Msa1259070:CDS 35.0%
! AAGCATCAAACGTGTTGTTA+TGG - chr8_2:60507220-60507239 Msa1259070:intron 35.0%
AACACTAAATAATCGCTGCT+AGG - chr8_2:60507318-60507337 Msa1259070:intron 35.0%
CCACAAAAAAAGATCAAGCA+AGG + chr8_2:60507366-60507385 None:intergenic 35.0%
!!! CCTTGCTTGATCTTTTTTTG+TGG - chr8_2:60507363-60507382 Msa1259070:five_prime_UTR 35.0%
GGTTGCAAATCAAGATAGAA+TGG + chr8_2:60507519-60507538 None:intergenic 35.0%
! AAGAAGAAGCTTTAGCGTAC+CGG + chr8_2:60502817-60502836 None:intergenic 40.0%
GCTTTCCTTCTTCGTATCTA+TGG - chr8_2:60502952-60502971 Msa1259070:three_prime_UTR 40.0%
GGATTCTTCTCTCGTTATCA+AGG - chr8_2:60502973-60502992 Msa1259070:three_prime_UTR 40.0%
AGGGGAAAATTGAGATCGAT+CGG + chr8_2:60503001-60503020 None:intergenic 40.0%
!! TGCACTGGTTGTGGTTAATT+AGG - chr8_2:60503087-60503106 Msa1259070:CDS 40.0%
TCATGCACACTCCTAATTGA+AGG - chr8_2:60503428-60503447 Msa1259070:intron 40.0%
ATTGAAGACAAGGATCCAGT+AGG - chr8_2:60503551-60503570 Msa1259070:intron 40.0%
GATTGGATCTTAACATGGCT+GGG - chr8_2:60503788-60503807 Msa1259070:CDS 40.0%
AAGTTAGATTCGCATCAGCA+GGG + chr8_2:60503846-60503865 None:intergenic 40.0%
AAAGTTAGATTCGCATCAGC+AGG + chr8_2:60503847-60503866 None:intergenic 40.0%
GTCCAGATGATCAATCATTC+TGG - chr8_2:60503964-60503983 Msa1259070:CDS 40.0%
CACCAGAATGATTGATCATC+TGG + chr8_2:60503969-60503988 None:intergenic 40.0%
AGACAGGAGGATATGTCAAA+GGG + chr8_2:60504041-60504060 None:intergenic 40.0%
! TCAGCAATATTTGCTAGCAC+TGG + chr8_2:60504168-60504187 None:intergenic 40.0%
CAGTCTATTCTAAACCCTCA+AGG - chr8_2:60504207-60504226 Msa1259070:CDS 40.0%
GGTGGTACAAGCTCAAAAAA+CGG - chr8_2:60504246-60504265 Msa1259070:CDS 40.0%
TTAGGAGTGACAGATTCACT+GGG + chr8_2:60504276-60504295 None:intergenic 40.0%
TTTAGGAGTGACAGATTCAC+TGG + chr8_2:60504277-60504296 None:intergenic 40.0%
TCTGTCACTCCTAAAGCAAA+AGG - chr8_2:60504282-60504301 Msa1259070:CDS 40.0%
ACTAGATCTAGCATAGTCAC+TGG + chr8_2:60504343-60504362 None:intergenic 40.0%
AGTGACTATGCTAGATCTAG+TGG - chr8_2:60504342-60504361 Msa1259070:CDS 40.0%
ACATTCCCAGGAGATCTTAA+GGG + chr8_2:60504378-60504397 None:intergenic 40.0%
AACATTCCCAGGAGATCTTA+AGG + chr8_2:60504379-60504398 None:intergenic 40.0%
TTCAAATTCTGTGCTACAGG+AGG - chr8_2:60504413-60504432 Msa1259070:intron 40.0%
CACAGTAGATTGTCCAGTTT+GGG + chr8_2:60504511-60504530 None:intergenic 40.0%
TCACAGTAGATTGTCCAGTT+TGG + chr8_2:60504512-60504531 None:intergenic 40.0%
TACTGTGAAATCCCCTTACT+GGG - chr8_2:60504524-60504543 Msa1259070:CDS 40.0%
! CAGGTTGAGTCTAAAATTGC+GGG - chr8_2:60504594-60504613 Msa1259070:CDS 40.0%
TACCCTTGTCATCACTAACA+GGG + chr8_2:60504704-60504723 None:intergenic 40.0%
TTACCCTTGTCATCACTAAC+AGG + chr8_2:60504705-60504724 None:intergenic 40.0%
GAAACCTAAAGTAGGGTTCT+TGG + chr8_2:60504778-60504797 None:intergenic 40.0%
!! GAGCACTGAAACCTAAAGTA+GGG + chr8_2:60504785-60504804 None:intergenic 40.0%
CCAGAAAATGGACAGTCAAT+AGG + chr8_2:60504807-60504826 None:intergenic 40.0%
!! CCTATTGACTGTCCATTTTC+TGG - chr8_2:60504804-60504823 Msa1259070:CDS 40.0%
AGAGTATGTGTCCCAGAAAA+TGG + chr8_2:60504819-60504838 None:intergenic 40.0%
GAAATGCGAAAGTTTCCTAG+AGG + chr8_2:60504858-60504877 None:intergenic 40.0%
TGAATGGCATGTTTCACAAG+GGG - chr8_2:60504913-60504932 Msa1259070:CDS 40.0%
TGTGGAGTGTATCCAATAAC+CGG - chr8_2:60504951-60504970 Msa1259070:CDS 40.0%
! TTTGGATTTGAAACGAGGTC+CGG + chr8_2:60504973-60504992 None:intergenic 40.0%
! CACACTTTGGATTTGAAACG+AGG + chr8_2:60504978-60504997 None:intergenic 40.0%
TCTGCACCATAAAAGAGAGA+AGG + chr8_2:60505268-60505287 None:intergenic 40.0%
!! GCTAGATAGTCGGTTCATTT+TGG - chr8_2:60505352-60505371 Msa1259070:CDS 40.0%
TGTCATAGACGGAACAATGA+TGG - chr8_2:60505382-60505401 Msa1259070:CDS 40.0%
CTACTGCATTCACAAAGATC+TGG - chr8_2:60505411-60505430 Msa1259070:CDS 40.0%
! CAAACAAGTTGAGTTCCCTT+GGG + chr8_2:60505467-60505486 None:intergenic 40.0%
! GGAACTCAACTTGTTTGGAT+TGG - chr8_2:60505470-60505489 Msa1259070:CDS 40.0%
! ACTCAACTTGTTTGGATTGG+AGG - chr8_2:60505473-60505492 Msa1259070:CDS 40.0%
AACCTCTAAGTCAACAGAGA+GGG + chr8_2:60505516-60505535 None:intergenic 40.0%
AAACCTCTAAGTCAACAGAG+AGG + chr8_2:60505517-60505536 None:intergenic 40.0%
GGTAAAACAAACCTAGGGAA+AGG + chr8_2:60505583-60505602 None:intergenic 40.0%
! AGGGTATTCAGAAGATCAAC+AGG + chr8_2:60505604-60505623 None:intergenic 40.0%
ATGTATCTACCAGGTAACTG+GGG + chr8_2:60505714-60505733 None:intergenic 40.0%
ACTGTCATCCTACCTGTATA+AGG + chr8_2:60505794-60505813 None:intergenic 40.0%
TCGACCTTCAAGTATGATAG+TGG + chr8_2:60505904-60505923 None:intergenic 40.0%
CTGAACTTGAATATTCCCCT+TGG - chr8_2:60505964-60505983 Msa1259070:CDS 40.0%
! TTGAATATTCCCCTTGGTGT+TGG - chr8_2:60505970-60505989 Msa1259070:CDS 40.0%
ATTTGATTCACAGGTTCAGG+TGG + chr8_2:60506081-60506100 None:intergenic 40.0%
ACCTGAACCTGTGAATCAAA+TGG - chr8_2:60506080-60506099 Msa1259070:CDS 40.0%
ACCATTTGATTCACAGGTTC+AGG + chr8_2:60506084-60506103 None:intergenic 40.0%
AAGGTGACACTGAAATTGCA+GGG + chr8_2:60506185-60506204 None:intergenic 40.0%
ATGGGGTAAGAAATAGACGA+AGG + chr8_2:60506204-60506223 None:intergenic 40.0%
CTTAAAGAGCTTGAGGCTAT+GGG - chr8_2:60506477-60506496 Msa1259070:CDS 40.0%
CAGTCAATTGATGAACTCTG+CGG - chr8_2:60506558-60506577 Msa1259070:CDS 40.0%
ATACCGTGACAGTGTGTTAT+TGG + chr8_2:60506985-60507004 None:intergenic 40.0%
AGGTGATGATAGGGATGAAA+TGG + chr8_2:60507022-60507041 None:intergenic 40.0%
CAGCAAAGTAGGTGATGATA+GGG + chr8_2:60507031-60507050 None:intergenic 40.0%
GGATTATGAAGCAGCAAAGT+AGG + chr8_2:60507042-60507061 None:intergenic 40.0%
! ACTGATGGGGTATTAATGCA+GGG - chr8_2:60507149-60507168 Msa1259070:intron 40.0%
!! TCCTGTTTGTTTCTGTGTCA+CGG + chr8_2:60507178-60507197 None:intergenic 40.0%
AGGCTACTGATGAAAAACGA+TGG - chr8_2:60507197-60507216 Msa1259070:intron 40.0%
GGATTTACTCAATGGAGAGT+AGG - chr8_2:60507241-60507260 Msa1259070:intron 40.0%
ACGAAGAAGGAAAGCGAAGA+AGG + chr8_2:60502947-60502966 None:intergenic 45.0%
!! GTTGTTTCATGCACTGGTTG+TGG - chr8_2:60503078-60503097 Msa1259070:CDS 45.0%
AATTGCTAGTGAGGCATGCT+GGG - chr8_2:60503312-60503331 Msa1259070:intron 45.0%
CGATTGGATCTTAACATGGC+TGG - chr8_2:60503787-60503806 Msa1259070:CDS 45.0%
ATCTTAACATGGCTGGGTTG+AGG - chr8_2:60503794-60503813 Msa1259070:CDS 45.0%
! TCTTAACATGGCTGGGTTGA+GGG - chr8_2:60503795-60503814 Msa1259070:CDS 45.0%
! TCTGGTGCTAAATCTGATGC+TGG - chr8_2:60503982-60504001 Msa1259070:CDS 45.0%
GACAGGAGGATATGTCAAAG+GGG + chr8_2:60504040-60504059 None:intergenic 45.0%
GAGACAGGAGGATATGTCAA+AGG + chr8_2:60504042-60504061 None:intergenic 45.0%
! TTTAGGAAAGGGTCTGAGAC+AGG + chr8_2:60504057-60504076 None:intergenic 45.0%
GAATAAAGAGCCTCGCGTAT+TGG + chr8_2:60504117-60504136 None:intergenic 45.0%
CTAGCATAGTCACTGGCATT+GGG + chr8_2:60504336-60504355 None:intergenic 45.0%
TCTAGCATAGTCACTGGCAT+TGG + chr8_2:60504337-60504356 None:intergenic 45.0%
CATTCCCAGGAGATCTTAAG+GGG + chr8_2:60504377-60504396 None:intergenic 45.0%
CTACTGTGAAATCCCCTTAC+TGG - chr8_2:60504523-60504542 Msa1259070:CDS 45.0%
ACTGTGAAATCCCCTTACTG+GGG - chr8_2:60504525-60504544 Msa1259070:CDS 45.0%
CTTGTACCAATTGCAACAGG+AGG + chr8_2:60504552-60504571 None:intergenic 45.0%
GAGCTTGTACCAATTGCAAC+AGG + chr8_2:60504555-60504574 None:intergenic 45.0%
AAAAAACGATGCCAGTCGAC+AGG - chr8_2:60504575-60504594 Msa1259070:CDS 45.0%
TTTAGACTCAACCTGTCGAC+TGG + chr8_2:60504589-60504608 None:intergenic 45.0%
TAAAATTGCGGGAGTTTCCC+CGG - chr8_2:60504605-60504624 Msa1259070:CDS 45.0%
AGGAACATTGAGATCAACCG+GGG + chr8_2:60504625-60504644 None:intergenic 45.0%
GAGGAACATTGAGATCAACC+GGG + chr8_2:60504626-60504645 None:intergenic 45.0%
GGAGGAACATTGAGATCAAC+CGG + chr8_2:60504627-60504646 None:intergenic 45.0%
AGTCCCTGTTAGTGATGACA+AGG - chr8_2:60504698-60504717 Msa1259070:intron 45.0%
GTCCCTGTTAGTGATGACAA+GGG - chr8_2:60504699-60504718 Msa1259070:intron 45.0%
GCAACCAAGAACCCTACTTT+AGG - chr8_2:60504771-60504790 Msa1259070:intron 45.0%
!! GGAGCACTGAAACCTAAAGT+AGG + chr8_2:60504786-60504805 None:intergenic 45.0%
ATGCGAAAGTTTCCTAGAGG+AGG + chr8_2:60504855-60504874 None:intergenic 45.0%
! TGAGCGTGGCTCCTTTTAAA+TGG + chr8_2:60504882-60504901 None:intergenic 45.0%
GCTCACTCTGATGCATTGAA+TGG - chr8_2:60504897-60504916 Msa1259070:CDS 45.0%
GAATGGCATGTTTCACAAGG+GGG - chr8_2:60504914-60504933 Msa1259070:CDS 45.0%
ACACTCCACAACCATCACAA+CGG + chr8_2:60504941-60504960 None:intergenic 45.0%
TTGAAACGAGGTCCGGTTAT+TGG + chr8_2:60504966-60504985 None:intergenic 45.0%
GACTTTGCATGCTTCGAAAG+AGG + chr8_2:60505329-60505348 None:intergenic 45.0%
CTGCATTCACAAAGATCTGG+CGG - chr8_2:60505414-60505433 Msa1259070:CDS 45.0%
! CCAAACAAGTTGAGTTCCCT+TGG + chr8_2:60505468-60505487 None:intergenic 45.0%
! CCAAGGGAACTCAACTTGTT+TGG - chr8_2:60505465-60505484 Msa1259070:CDS 45.0%
TTGAATATCCCAGGTTCCTG+AGG - chr8_2:60505638-60505657 Msa1259070:CDS 45.0%
ACGTCAAGCTCTTTCTCTAC+AGG + chr8_2:60505672-60505691 None:intergenic 45.0%
GTATAAGGACCCAAACACGT+TGG + chr8_2:60505779-60505798 None:intergenic 45.0%
ACGTGTTTGGGTCCTTATAC+AGG - chr8_2:60505779-60505798 Msa1259070:CDS 45.0%
GTTTGGGTCCTTATACAGGT+AGG - chr8_2:60505783-60505802 Msa1259070:CDS 45.0%
TTCAGAGCTACCAACACCAA+GGG + chr8_2:60505983-60506002 None:intergenic 45.0%
ATTCAGAGCTACCAACACCA+AGG + chr8_2:60505984-60506003 None:intergenic 45.0%
!! TTGGTGTTGGTAGCTCTGAA+TGG - chr8_2:60505983-60506002 Msa1259070:CDS 45.0%
!!! AGGTGGAGCATTGGGATTTT+GGG + chr8_2:60506064-60506083 None:intergenic 45.0%
TAAGGAACAGAGGCAGGAAT+TGG - chr8_2:60506107-60506126 Msa1259070:CDS 45.0%
AAGGAACAGAGGCAGGAATT+GGG - chr8_2:60506108-60506127 Msa1259070:CDS 45.0%
AGGTGACACTGAAATTGCAG+GGG + chr8_2:60506184-60506203 None:intergenic 45.0%
GAAGGTGACACTGAAATTGC+AGG + chr8_2:60506186-60506205 None:intergenic 45.0%
TTGAAGTTTGCGGAATGGCT+GGG + chr8_2:60506398-60506417 None:intergenic 45.0%
CAGAGTTGAAGTTTGCGGAA+TGG + chr8_2:60506403-60506422 None:intergenic 45.0%
CATTCCGCAAACTTCAACTC+TGG - chr8_2:60506401-60506420 Msa1259070:CDS 45.0%
GCATCCAGAGTTGAAGTTTG+CGG + chr8_2:60506408-60506427 None:intergenic 45.0%
CCATAGCCTCAAGCTCTTTA+AGG + chr8_2:60506479-60506498 None:intergenic 45.0%
CCTTAAAGAGCTTGAGGCTA+TGG - chr8_2:60506476-60506495 Msa1259070:CDS 45.0%
AACTCTGCGGTGTTCTTGAT+TGG - chr8_2:60506571-60506590 Msa1259070:intron 45.0%
ACTCTGCGGTGTTCTTGATT+GGG - chr8_2:60506572-60506591 Msa1259070:intron 45.0%
GTGCCAATAACACACTGTCA+CGG - chr8_2:60506979-60506998 Msa1259070:intron 45.0%
ATGAAATGGAGCACACGGAT+TGG + chr8_2:60507008-60507027 None:intergenic 45.0%
TAGGGATGAAATGGAGCACA+CGG + chr8_2:60507013-60507032 None:intergenic 45.0%
GCAGCAAAGTAGGTGATGAT+AGG + chr8_2:60507032-60507051 None:intergenic 45.0%
! GACTGATGGGGTATTAATGC+AGG - chr8_2:60507148-60507167 Msa1259070:intron 45.0%
TCCGTGACACAGAAACAAAC+AGG - chr8_2:60507174-60507193 Msa1259070:intron 45.0%
GTGACACAGAAACAAACAGG+AGG - chr8_2:60507177-60507196 Msa1259070:intron 45.0%
TAGCGTTAATAGCGGCTCAC+CGG - chr8_2:60502795-60502814 Msa1259070:three_prime_UTR 50.0%
GAATTGCTAGTGAGGCATGC+TGG - chr8_2:60503311-60503330 Msa1259070:intron 50.0%
CGAAATATGGAGATGCCCTC+AGG - chr8_2:60503734-60503753 Msa1259070:CDS 50.0%
! ACGAACATTGAAGCGCCTGA+GGG + chr8_2:60503752-60503771 None:intergenic 50.0%
! TGTTGATGAGGATGGCGACT+TGG - chr8_2:60503873-60503892 Msa1259070:CDS 50.0%
!! TGGCGACTTGGTGAATCTTG+TGG - chr8_2:60503885-60503904 Msa1259070:CDS 50.0%
GGTGCTAAATCTGATGCTGG+TGG - chr8_2:60503985-60504004 Msa1259070:CDS 50.0%
AGGAGGATATGTCAAAGGGG+TGG + chr8_2:60504037-60504056 None:intergenic 50.0%
TGATGCTTTGCAAGCTCTGC+CGG - chr8_2:60504089-60504108 Msa1259070:CDS 50.0%
!! CAACGTGAGATTGGCCTTGA+GGG + chr8_2:60504224-60504243 None:intergenic 50.0%
TACCACCAGCAACGTGAGAT+TGG + chr8_2:60504233-60504252 None:intergenic 50.0%
! GACTGCGGACCTTTTGCTTT+AGG + chr8_2:60504294-60504313 None:intergenic 50.0%
GAATCCACACATGGAGACTG+CGG + chr8_2:60504309-60504328 None:intergenic 50.0%
TTGGGAGCAGAATCCACACA+TGG + chr8_2:60504318-60504337 None:intergenic 50.0%
CCATCCCCTTAAGATCTCCT+GGG - chr8_2:60504370-60504389 Msa1259070:CDS 50.0%
GGAACTTGTCTCGAAGATGC+AGG + chr8_2:60504465-60504484 None:intergenic 50.0%
CTGTGAAATCCCCTTACTGG+GGG - chr8_2:60504526-60504545 Msa1259070:CDS 50.0%
GATGAGTAGGGATTGCATGG+AGG + chr8_2:60504645-60504664 None:intergenic 50.0%
GTGGATGAGTAGGGATTGCA+TGG + chr8_2:60504648-60504667 None:intergenic 50.0%
CTAACAGGGACTGCTGATGA+AGG + chr8_2:60504690-60504709 None:intergenic 50.0%
CATTCAATGCCACCTCCTCT+AGG - chr8_2:60504840-60504859 Msa1259070:CDS 50.0%
CGAAAGTTTCCTAGAGGAGG+TGG + chr8_2:60504852-60504871 None:intergenic 50.0%
TCAATGCATCAGAGTGAGCG+TGG + chr8_2:60504896-60504915 None:intergenic 50.0%
GGGAACGAAAAGATGCAGGA+CGG + chr8_2:60505150-60505169 None:intergenic 50.0%
CTTGGGGAACGAAAAGATGC+AGG + chr8_2:60505154-60505173 None:intergenic 50.0%
GCAACAATGGCACTTCAGTG+TGG - chr8_2:60505441-60505460 Msa1259070:CDS 50.0%
!! CTCCCTCTCTGTTGACTTAG+AGG - chr8_2:60505511-60505530 Msa1259070:CDS 50.0%
ATATCCCAGGTTCCTGAGGA+CGG - chr8_2:60505642-60505661 Msa1259070:CDS 50.0%
GAAGGTCGATGCATCTCTCA+AGG - chr8_2:60505915-60505934 Msa1259070:CDS 50.0%
TCAGAGCTACCAACACCAAG+GGG + chr8_2:60505982-60506001 None:intergenic 50.0%
!! TTGGTAGCTCTGAATGGCCT+CGG - chr8_2:60505989-60506008 Msa1259070:CDS 50.0%
!!! GGTGGAGCATTGGGATTTTG+GGG + chr8_2:60506063-60506082 None:intergenic 50.0%
!!! CAGGTGGAGCATTGGGATTT+TGG + chr8_2:60506065-60506084 None:intergenic 50.0%
! ACAGGTTCAGGTGGAGCATT+GGG + chr8_2:60506072-60506091 None:intergenic 50.0%
!! GGTTGATAAGGAACAGAGGC+AGG - chr8_2:60506101-60506120 Msa1259070:CDS 50.0%
TGAAGTTTGCGGAATGGCTG+GGG + chr8_2:60506397-60506416 None:intergenic 50.0%
GTTGAAGTTTGCGGAATGGC+TGG + chr8_2:60506399-60506418 None:intergenic 50.0%
GGCTCTCCTTAAAGAGCTTG+AGG - chr8_2:60506470-60506489 Msa1259070:CDS 50.0%
TGAGGCTATGGGTTTCAAGC+AGG - chr8_2:60506488-60506507 Msa1259070:CDS 50.0%
TCGTGTAGCTCTTCAAGGAG+AGG + chr8_2:60506600-60506619 None:intergenic 50.0%
CCATCTCGTGTAGCTCTTCA+AGG + chr8_2:60506605-60506624 None:intergenic 50.0%
CCTTGAAGAGCTACACGAGA+TGG - chr8_2:60506602-60506621 Msa1259070:intron 50.0%
! CACGAACATTGAAGCGCCTG+AGG + chr8_2:60503753-60503772 None:intergenic 55.0%
CAGGCGCTTCAATGTTCGTG+TGG - chr8_2:60503753-60503772 Msa1259070:CDS 55.0%
!! TCTGATGCTGGTGGCTCTAG+TGG - chr8_2:60503994-60504013 Msa1259070:CDS 55.0%
! AGGAAAGGGTCTGAGACAGG+AGG + chr8_2:60504054-60504073 None:intergenic 55.0%
!! GCAACGTGAGATTGGCCTTG+AGG + chr8_2:60504225-60504244 None:intergenic 55.0%
CAAGGCCAATCTCACGTTGC+TGG - chr8_2:60504225-60504244 Msa1259070:CDS 55.0%
GCCATCCCCTTAAGATCTCC+TGG - chr8_2:60504369-60504388 Msa1259070:CDS 55.0%
CCCAGGAGATCTTAAGGGGA+TGG + chr8_2:60504373-60504392 None:intergenic 55.0%
ACAGGGACTGCTGATGAAGG+TGG + chr8_2:60504687-60504706 None:intergenic 55.0%
! ATCTGGCGGATGCGCAACAA+TGG - chr8_2:60505428-60505447 Msa1259070:CDS 55.0%
TACACCGTCCTCAGGAACCT+GGG + chr8_2:60505649-60505668 None:intergenic 55.0%
TCTACAGGTACACCGTCCTC+AGG + chr8_2:60505657-60505676 None:intergenic 55.0%
! TTTAGAGCGCCCCAGTTACC+TGG - chr8_2:60505702-60505721 Msa1259070:CDS 55.0%
TGGAGGATGGCATCTCTCTC+TGG - chr8_2:60505741-60505760 Msa1259070:CDS 55.0%
CACAGGTTCAGGTGGAGCAT+TGG + chr8_2:60506073-60506092 None:intergenic 55.0%
TGAAATTGCAGGGGCTGAGG+CGG + chr8_2:60506175-60506194 None:intergenic 55.0%
CACTGAAATTGCAGGGGCTG+AGG + chr8_2:60506178-60506197 None:intergenic 55.0%
AGAGAAAGAGGGAGCAGCTG+GGG + chr8_2:60506247-60506266 None:intergenic 55.0%
CAGAGAAAGAGGGAGCAGCT+GGG + chr8_2:60506248-60506267 None:intergenic 55.0%
GGGGATGTGCCAGAGAAAGA+GGG + chr8_2:60506318-60506337 None:intergenic 55.0%
CTCTTTCTCTGGCACATCCC+CGG - chr8_2:60506317-60506336 Msa1259070:CDS 55.0%
GGGGATGTGCCAGAGAAAGA+GGG + chr8_2:60506318-60506337 None:intergenic 55.0%
CTCTTTCTCTGGCACATCCC+CGG - chr8_2:60506317-60506336 Msa1259070:CDS 55.0%
!! GATGCTGGTGGCTCTAGTGG+AGG - chr8_2:60503997-60504016 Msa1259070:CDS 60.0%
!! GGCTCTAGTGGAGGTGCTAG+TGG - chr8_2:60504006-60504025 Msa1259070:CDS 60.0%
!! AGAGCCTCGCGTATTGGCTC+CGG + chr8_2:60504111-60504130 None:intergenic 60.0%
GGCCAATCTCACGTTGCTGG+TGG - chr8_2:60504228-60504247 Msa1259070:CDS 60.0%
AGGTCCGCAGTCTCCATGTG+TGG - chr8_2:60504302-60504321 Msa1259070:CDS 60.0%
AACAGGAGGCCCCCAGTAAG+GGG + chr8_2:60504538-60504557 None:intergenic 60.0%
CAACAGGAGGCCCCCAGTAA+GGG + chr8_2:60504539-60504558 None:intergenic 60.0%
TGGGGGCCTCCTGTTGCAAT+TGG - chr8_2:60504543-60504562 Msa1259070:CDS 60.0%
CACAAGGGGGTCCGTTGTGA+TGG - chr8_2:60504927-60504946 Msa1259070:CDS 60.0%
GGGGTCCGTTGTGATGGTTG+TGG - chr8_2:60504933-60504952 Msa1259070:CDS 60.0%
TGGCACTTCAGTGTGGCCCA+AGG - chr8_2:60505448-60505467 Msa1259070:CDS 60.0%
GGCACTTCAGTGTGGCCCAA+GGG - chr8_2:60505449-60505468 Msa1259070:CDS 60.0%
GTACACCGTCCTCAGGAACC+TGG + chr8_2:60505650-60505669 None:intergenic 60.0%
CCAGAGAAAGAGGGAGCAGC+TGG + chr8_2:60506249-60506268 None:intergenic 60.0%
CCAGCTGCTCCCTCTTTCTC+TGG - chr8_2:60506246-60506265 Msa1259070:CDS 60.0%
AGAGAAAGAGGGAGCAGCCG+GGG + chr8_2:60506277-60506296 None:intergenic 60.0%
CAGAGAAAGAGGGAGCAGCC+GGG + chr8_2:60506278-60506297 None:intergenic 60.0%
CCAGAGAAAGAGGGAGCAGC+CGG + chr8_2:60506249-60506268 None:intergenic 60.0%
GGGGCTGTGCCAGAGAAAGA+GGG + chr8_2:60506288-60506307 None:intergenic 60.0%
CTCTTTCTCTGGCACAGCCC+CGG - chr8_2:60506287-60506306 Msa1259070:CDS 60.0%
AGAGAAAGAGGGAGCAGCCG+GGG + chr8_2:60506277-60506296 None:intergenic 60.0%
CAGAGAAAGAGGGAGCAGCC+GGG + chr8_2:60506278-60506297 None:intergenic 60.0%
CCAGAGAAAGAGGGAGCAGC+CGG + chr8_2:60506249-60506268 None:intergenic 60.0%
CGGGGATGTGCCAGAGAAAG+AGG + chr8_2:60506319-60506338 None:intergenic 60.0%
AGAGAAAGAGGGAGCAGCCG+GGG + chr8_2:60506277-60506296 None:intergenic 60.0%
CAGAGAAAGAGGGAGCAGCC+GGG + chr8_2:60506278-60506297 None:intergenic 60.0%
CCAGAGAAAGAGGGAGCAGC+CGG + chr8_2:60506249-60506268 None:intergenic 60.0%
CGGGGATGTGCCAGAGAAAG+AGG + chr8_2:60506319-60506338 None:intergenic 60.0%
AGAGAAAGAGGGACCAGCCG+GGG + chr8_2:60506367-60506386 None:intergenic 60.0%
CAGAGAAAGAGGGACCAGCC+GGG + chr8_2:60506368-60506387 None:intergenic 60.0%
CCAGAGAAAGAGGGACCAGC+CGG + chr8_2:60506369-60506388 None:intergenic 60.0%
TCTGCCGGAGCCAATACGCG+AGG - chr8_2:60504104-60504123 Msa1259070:CDS 65.0%
GCAACAGGAGGCCCCCAGTA+AGG + chr8_2:60504540-60504559 None:intergenic 65.0%
GGGGCTGCGCCAGAGAAAGA+GGG + chr8_2:60506258-60506277 None:intergenic 65.0%
CTCTTTCTCTGGCGCAGCCC+CGG - chr8_2:60506257-60506276 Msa1259070:CDS 65.0%
CCGGCTGCTCCCTCTTTCTC+TGG - chr8_2:60506276-60506295 Msa1259070:CDS 65.0%
CGGGGCTGTGCCAGAGAAAG+AGG + chr8_2:60506289-60506308 None:intergenic 65.0%
CCGGCTGCTCCCTCTTTCTC+TGG - chr8_2:60506276-60506295 Msa1259070:CDS 65.0%
CCGGCTGCTCCCTCTTTCTC+TGG - chr8_2:60506276-60506295 Msa1259070:CDS 65.0%
TTCTCTGGCACATCCCCGGC+TGG - chr8_2:60506321-60506340 Msa1259070:CDS 65.0%
! CCGGCTGGTCCCTCTTTCTC+TGG - chr8_2:60506366-60506385 Msa1259070:CDS 65.0%
GGGGCTGCGCCAGAGAAAGA+GGG + chr8_2:60506258-60506277 None:intergenic 65.0%
TGGGGCTGCGCCAGAGAAAG+AGG + chr8_2:60506379-60506398 None:intergenic 65.0%
TGAGGCGGCAGGGCCGACAA+AGG + chr8_2:60506160-60506179 None:intergenic 70.0%
TTGCAGGGGCTGAGGCGGCA+GGG + chr8_2:60506170-60506189 None:intergenic 70.0%
ATTGCAGGGGCTGAGGCGGC+AGG + chr8_2:60506171-60506190 None:intergenic 70.0%
CGGGGCTGCGCCAGAGAAAG+AGG + chr8_2:60506259-60506278 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 60502754 60507560 60502754 ID=Msa1259070;Name=Msa1259070
chr8_2 mRNA 60502754 60507560 60502754 ID=Msa1259070-mRNA-1;Parent=Msa1259070;Name=Msa1259070-mRNA-1;_AED=0.01;_eAED=0.01;_QI=217|1|0.85|1|1|1|7|298|868
chr8_2 exon 60502754 60503144 60502754 ID=Msa1259070-mRNA-1:exon:18967;Parent=Msa1259070-mRNA-1
chr8_2 exon 60503691 60504395 60503691 ID=Msa1259070-mRNA-1:exon:18966;Parent=Msa1259070-mRNA-1
chr8_2 exon 60504514 60504663 60504514 ID=Msa1259070-mRNA-1:exon:18965;Parent=Msa1259070-mRNA-1
chr8_2 exon 60504782 60505027 60504782 ID=Msa1259070-mRNA-1:exon:18964;Parent=Msa1259070-mRNA-1
chr8_2 exon 60505113 60505239 60505113 ID=Msa1259070-mRNA-1:exon:18963;Parent=Msa1259070-mRNA-1
chr8_2 exon 60505320 60506581 60505320 ID=Msa1259070-mRNA-1:exon:18962;Parent=Msa1259070-mRNA-1
chr8_2 exon 60507320 60507560 60507320 ID=Msa1259070-mRNA-1:exon:18961;Parent=Msa1259070-mRNA-1
chr8_2 five_prime_UTR 60507344 60507560 60507344 ID=Msa1259070-mRNA-1:five_prime_utr;Parent=Msa1259070-mRNA-1
chr8_2 CDS 60507320 60507343 60507320 ID=Msa1259070-mRNA-1:cds;Parent=Msa1259070-mRNA-1
chr8_2 CDS 60505320 60506581 60505320 ID=Msa1259070-mRNA-1:cds;Parent=Msa1259070-mRNA-1
chr8_2 CDS 60505113 60505239 60505113 ID=Msa1259070-mRNA-1:cds;Parent=Msa1259070-mRNA-1
chr8_2 CDS 60504782 60505027 60504782 ID=Msa1259070-mRNA-1:cds;Parent=Msa1259070-mRNA-1
chr8_2 CDS 60504514 60504663 60504514 ID=Msa1259070-mRNA-1:cds;Parent=Msa1259070-mRNA-1
chr8_2 CDS 60503691 60504395 60503691 ID=Msa1259070-mRNA-1:cds;Parent=Msa1259070-mRNA-1
chr8_2 CDS 60503052 60503144 60503052 ID=Msa1259070-mRNA-1:cds;Parent=Msa1259070-mRNA-1
chr8_2 three_prime_UTR 60502754 60503051 60502754 ID=Msa1259070-mRNA-1:three_prime_utr;Parent=Msa1259070-mRNA-1
Gene Sequence

>Msa1259070

ATGGATTCTTCTCTCGTTATCAAGGCGAAATATGGAGATGCCCTCAGGCGCTTCAATGTTCGTGTGGATGAGAATAATCGATTGGATCTTAACATGGCTGGGTTGAGGGCTAAGATATGTTCTATTTACAATTTCCCTGCTGATGCGAATCTAACTTTGAGATATGTTGATGAGGATGGCGACTTGGTGAATCTTGTGGATGATGAAGATTTGCATGATGTGATGAGACAGCAATTAAAATTCTTGAAAATTGATGTCCAGATGATCAATCATTCTGGTGCTAAATCTGATGCTGGTGGCTCTAGTGGAGGTGCTAGTGGAAGTGCCACCCCTTTGACATATCCTCCTGTCTCAGACCCTTTCCTAAACTTTGTTAAAGCTGATGCTTTGCAAGCTCTGCCGGAGCCAATACGCGAGGCTCTTTATTCGTCATTTGCAAAGGCTGCATCTTCAAATCCAGTGCTAGCAAATATTGCTGATTCAATTTCCAAAATTGGACAGTCTATTCTAAACCCTCAAGGCCAATCTCACGTTGCTGGTGGTACAAGCTCAAAAAACGGCGTTCCCAGTGAATCTGTCACTCCTAAAGCAAAAGGTCCGCAGTCTCCATGTGTGGATTCTGCTCCCAATGCCAGTGACTATGCTAGATCTAGTGGAACTGCCATCCCCTTAAGATCTCCTGGGAATGTTGTTAAAACTAATGTTTCAAATTCTGTGCTACAGGAGGCTCTTTCTAATTTGTCACTTTCAAAACCTGCATCTTCGAGACAAGTTCCCTCTAATTCCACTGATTCAATTTCCCAAACTGGACAATCTACTGTGAAATCCCCTTACTGGGGGCCTCCTGTTGCAATTGGTACAAGCTCAAAAAACGATGCCAGTCGACAGGTTGAGTCTAAAATTGCGGGAGTTTCCCCGGTTGATCTCAATGTTCCTCCATGCAATCCCTACTCATCCACTAACGTAAATAGAGTACCACCTTCATCAGCAGTCCCTGTTAGTGATGACAAGGGTAAATCGTCTATTGATGACAAGGGTAATTTTGTCTTTCCTAATAACAATGCAACCAAGAACCCTACTTTAGGTTTCAGTGCTCCTATTGACTGTCCATTTTCTGGGACACATACTCTTCATTCAATGCCACCTCCTCTAGGAAACTTTCGCATTTCTCCATTTAAAAGGAGCCACGCTCACTCTGATGCATTGAATGGCATGTTTCACAAGGGGGTCCGTTGTGATGGTTGTGGAGTGTATCCAATAACCGGACCTCGTTTCAAATCCAAAGTAAAAGAAAACTATGATCTATGCATCATTTGCTTCAATGAAATGGGTAATCAGATTGATTATATCAGAATGGACCGTCCTGCATCTTTTCGTTCCCCAAGATGTTCATATCTGAATACCAAAGAATTTAGACATCCAAAGATACCACCACCTATTTTTAAAACAGGACCTCTTTCGAAGCATGCAAAGTCTAAGCTAGATAGTCGGTTCATTTTGGATGTTAATGTCATAGACGGAACAATGATGGCTCCATCTACTGCATTCACAAAGATCTGGCGGATGCGCAACAATGGCACTTCAGTGTGGCCCAAGGGAACTCAACTTGTTTGGATTGGAGGAGACAAACTAAGTGACTCCCTCTCTGTTGACTTAGAGGTTCCTGAGGACGGTGTACCTGTAGAGAAAGAGCTTGACGTTGCAGTTGATTTTAGAGCGCCCCAGTTACCTGGTAGATACATATCATACTGGAGGATGGCATCTCTCTCTGGACATAAATTTGGCCAACGTGTTTGGGTCCTTATACAGGTCGATGCATCTCTCAAGGACTCATTTTATGATAGCTCGCAAGGTCTGAACTTGAATATTCCCCTTGGTGTTGGTAGCTCTGAATGGCCTCGGATTATAGATATCAATGTTCAACCTATTGAGGATGATGTTTTTCATCAACCCCAAAATCCCAATGCTCCACCTGAACCTGTGAATCAAATGGTTGATAAGGAACAGAGGCAGGAATTGGGAAATGAATTTCCTACAAATGAAGCTACCTTTGTCGGCCCTGCCGCCTCAGCCCCTGCAATTTCAGTGTCACCTTCGTCTATTTCTTACCCCATTATTGATTTCTCTGGCACAGCCCCAGCTGCTCCCTCTTTCTCTGGCGCAGCCCCGGCTGCTCCCTCTTTCTCTGGCACAGCCCCGGCTGCTCCCTCTTTCTCTGGCACATCCCCGGCTGCTCCCTCTTTCTCTGGCACATCCCCGGCTGGTCCCTCTTTCTCTGGCGCAGCCCCAGCCATTCCGCAAACTTCAACTCTGGATGCACTTTCATCATCTCTAAGCACAGATAATGATCTTGTGGAAGAGGCTCTCCTTAAAGAGCTTGAGGCTATGGGTTTCAAGCAGGTTGATTTAAACAAAGAGGTTCTGAGAATGACAGATTACAATCTGGAGCAGTCAATTGATGAACTCTGCGGTGTTCTTGATTGGGATCCTCTCCTTGAAGAGCTACACGAGATGGGTTTCCGTGACACAGAAACAAACAGGAGGCTACTGATGAAAAACGATGGAAGCATCAAACGTGTTGTTATGGATTTACTCAATGGAGAGTAG
Protein sequence

>Msa1259070

MDSSLVIKAKYGDALRRFNVRVDENNRLDLNMAGLRAKICSIYNFPADANLTLRYVDEDGDLVNLVDDEDLHDVMRQQLKFLKIDVQMINHSGAKSDAGGSSGGASGSATPLTYPPVSDPFLNFVKADALQALPEPIREALYSSFAKAASSNPVLANIADSISKIGQSILNPQGQSHVAGGTSSKNGVPSESVTPKAKGPQSPCVDSAPNASDYARSSGTAIPLRSPGNVVKTNVSNSVLQEALSNLSLSKPASSRQVPSNSTDSISQTGQSTVKSPYWGPPVAIGTSSKNDASRQVESKIAGVSPVDLNVPPCNPYSSTNVNRVPPSSAVPVSDDKGKSSIDDKGNFVFPNNNATKNPTLGFSAPIDCPFSGTHTLHSMPPPLGNFRISPFKRSHAHSDALNGMFHKGVRCDGCGVYPITGPRFKSKVKENYDLCIICFNEMGNQIDYIRMDRPASFRSPRCSYLNTKEFRHPKIPPPIFKTGPLSKHAKSKLDSRFILDVNVIDGTMMAPSTAFTKIWRMRNNGTSVWPKGTQLVWIGGDKLSDSLSVDLEVPEDGVPVEKELDVAVDFRAPQLPGRYISYWRMASLSGHKFGQRVWVLIQVDASLKDSFYDSSQGLNLNIPLGVGSSEWPRIIDINVQPIEDDVFHQPQNPNAPPEPVNQMVDKEQRQELGNEFPTNEATFVGPAASAPAISVSPSSISYPIIDFSGTAPAAPSFSGAAPAAPSFSGTAPAAPSFSGTSPAAPSFSGTSPAGPSFSGAAPAIPQTSTLDALSSSLSTDNDLVEEALLKELEAMGFKQVDLNKEVLRMTDYNLEQSIDELCGVLDWDPLLEELHEMGFRDTETNRRLLMKNDGSIKRVVMDLLNGE*