AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0980920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0980920 MtrunA17_Chr6g0461471 94.706 340 16 1 6 343 2 341 0.0 660
Msa0980920 MtrunA17_Chr6g0461511 63.689 347 123 2 5 350 23 367 2.68e-159 457
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0980920 AT5G18200.1 63.284 335 120 2 11 343 17 350 4.30e-166 467

Find 110 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGCTCATTTCCATGAAT+TGG 0.232171 6_4:+19577249 Msa0980920:CDS
ATAACCCGAATTGGAAAATT+CGG 0.289688 6_4:+19575123 Msa0980920:CDS
TTCCAATTCGGGTTATTATC+TGG 0.293477 6_4:-19575116 None:intergenic
AATGCGCACCCGAGATATTT+CGG 0.295957 6_4:+19575090 Msa0980920:CDS
GTTCAGTGTTGGATGGGTTT+GGG 0.306348 6_4:+19575216 Msa0980920:CDS
TACGAAGTTGTGGTGAGTTT+TGG 0.307048 6_4:-19574932 None:intergenic
AGTTCAGTGTTGGATGGGTT+TGG 0.317455 6_4:+19575215 Msa0980920:CDS
CACAATTGCTTAAGTTTGTA+TGG 0.322472 6_4:+19578997 Msa0980920:three_prime_UTR
CAGATAGTGCCTCAACTAAT+TGG 0.326472 6_4:+19578566 Msa0980920:CDS
CAGAATTGGCATACAATCAT+TGG 0.328541 6_4:+19578537 Msa0980920:CDS
GCAGCATCCTCAGGGAAAAC+TGG 0.337155 6_4:-19578629 None:intergenic
AAGCTCTTCATGATAGCTTA+TGG 0.338510 6_4:+19578816 Msa0980920:three_prime_UTR
TGATGTGGTGTTGTCTGATT+TGG 0.356261 6_4:+19575271 Msa0980920:CDS
CTTATACAGAAGCACTTATA+TGG 0.359670 6_4:+19578891 Msa0980920:three_prime_UTR
AAATAGAGCTTCCTCCAAAC+AGG 0.366855 6_4:-19578722 None:intergenic
ATGCGCACCCGAGATATTTC+GGG 0.366955 6_4:+19575091 Msa0980920:CDS
CCATGAATTGGATGCTGAAA+AGG 0.387668 6_4:+19577261 Msa0980920:CDS
AGAATCTTTGCAGCATCCTC+AGG 0.393557 6_4:-19578638 None:intergenic
ACAGACCCCGTTTCATCATC+AGG 0.399974 6_4:-19575191 None:intergenic
TGCCAGATAATAACCCGAAT+TGG 0.403072 6_4:+19575114 Msa0980920:CDS
CTGTTAACCTAGGCCCTGTT+TGG 0.404263 6_4:+19578708 Msa0980920:three_prime_UTR
GCGGGTTTCGAGCTCGCAAC+TGG 0.404379 6_4:+19578593 Msa0980920:CDS
TGATGATTTGGATTTGAAAT+CGG 0.408535 6_4:-19575012 None:intergenic
GGCTTGAGCTTCTATACTGT+TGG 0.412288 6_4:+19579077 Msa0980920:three_prime_UTR
GTTCGTTGCCCTTTCTGTAT+CGG 0.415234 6_4:+19575056 Msa0980920:CDS
ATGTTACAGGCAGTTGATCT+TGG 0.417966 6_4:+19578416 Msa0980920:intron
TGTCTGATTTGGAGAGGGAG+GGG 0.419011 6_4:+19575282 Msa0980920:CDS
AAACTCTATCAAATATGTTC+AGG 0.420894 6_4:+19575358 Msa0980920:CDS
GCAGACCCTGATGATGAAAC+GGG 0.430802 6_4:+19575185 Msa0980920:CDS
CCAAGACGGGCTGAAACATT+AGG 0.431537 6_4:-19577073 None:intergenic
TAACCCGAATTGGAAAATTC+GGG 0.432987 6_4:+19575124 Msa0980920:CDS
TCTGTAAGTTCAGTGTTGGA+TGG 0.440984 6_4:+19575209 Msa0980920:CDS
GTGATAGGATTCGTGAGCTT+GGG 0.442215 6_4:+19575330 Msa0980920:CDS
GACTTAAGTCCCTCTTAAGA+TGG 0.446531 6_4:+19579024 Msa0980920:three_prime_UTR
CTGTAAGTTCAGTGTTGGAT+GGG 0.447062 6_4:+19575210 Msa0980920:CDS
GCATGGCGATGAGTCAGAAT+TGG 0.451891 6_4:+19578523 Msa0980920:CDS
TGTGATAGGATTCGTGAGCT+TGG 0.455222 6_4:+19575329 Msa0980920:CDS
CTACTGTTTGAGAGAACCTA+TGG 0.460131 6_4:+19578756 Msa0980920:three_prime_UTR
ATCTGGCACCCGAAATATCT+CGG 0.460463 6_4:-19575099 None:intergenic
GGAACAATCCATATCTCAAA+AGG 0.462175 6_4:-19577217 None:intergenic
TCATGATAGCTTATGGAAGT+AGG 0.463310 6_4:+19578823 Msa0980920:three_prime_UTR
TGCAGACCCTGATGATGAAA+CGG 0.463924 6_4:+19575184 Msa0980920:CDS
GCAACGAACACCAGTGGGAT+TGG 0.472736 6_4:-19575042 None:intergenic
TTGTCTGATTTGGAGAGGGA+GGG 0.478640 6_4:+19575281 Msa0980920:CDS
AGCCCGTCTTGGAAGTATGA+AGG 0.481150 6_4:+19577084 Msa0980920:CDS
GATTTGGAGAGGGAGGGGAT+TGG 0.483449 6_4:+19575287 Msa0980920:CDS
TTAACCTAGGCCCTGTTTGG+AGG 0.487202 6_4:+19578711 Msa0980920:three_prime_UTR
CCTAATGTTTCAGCCCGTCT+TGG 0.487742 6_4:+19577073 Msa0980920:CDS
GTTGTCTGATTTGGAGAGGG+AGG 0.487874 6_4:+19575280 Msa0980920:CDS
AAAGGAAATGAAGCGGCATA+AGG 0.490064 6_4:-19577199 None:intergenic
GCTTCCTCCAAACAGGGCCT+AGG 0.492163 6_4:-19578715 None:intergenic
GCAAGTTCGCGTGAAAGAGC+AGG 0.495892 6_4:-19575164 None:intergenic
GACTAGGATGATTGTTGTGT+TGG 0.497988 6_4:-19574838 None:intergenic
TGATGTTGTTATTGAAACTC+CGG 0.499632 6_4:+19575244 Msa0980920:CDS
TGTTGGGAACTAACTTCACT+TGG 0.501561 6_4:-19574821 None:intergenic
GAAACATTAGGTGGAATAAC+GGG 0.507381 6_4:-19577061 None:intergenic
CTTACACAAGTTGTTTCCAT+AGG 0.510556 6_4:-19578772 None:intergenic
TGAAACATTAGGTGGAATAA+CGG 0.515108 6_4:-19577062 None:intergenic
ATCCTTCATACTTCCAAGAC+GGG 0.518956 6_4:-19577086 None:intergenic
TTACAGGCAGTTGATCTTGG+AGG 0.526027 6_4:+19578419 Msa0980920:intron
TGTTCGTTGCCGATACAGAA+AGG 0.529073 6_4:-19575065 None:intergenic
GACAACACCACATCATGATC+CGG 0.530034 6_4:-19575263 None:intergenic
AAGACACAATCTTCAACCGT+TGG 0.537507 6_4:+19574955 Msa0980920:CDS
GGAGAGGGAGGGGATTGGTG+AGG 0.538006 6_4:+19575292 Msa0980920:CDS
CTGACATGATGACATCTCCT+TGG 0.538865 6_4:+19579056 Msa0980920:three_prime_UTR
GTTTGTTGAAACAAATGCTA+AGG 0.542952 6_4:+19578441 Msa0980920:CDS
GATGTGCAATCCATCTTAAG+AGG 0.545567 6_4:-19579034 None:intergenic
GTTGTTGTTTGTGACTGACT+AGG 0.547306 6_4:-19574854 None:intergenic
CATTAGGTGGAATAACGGGC+AGG 0.552079 6_4:-19577057 None:intergenic
ATGCACCAGCTGCAGCGCCA+TGG 0.552085 6_4:-19577003 None:intergenic
CCTCAACTAATTGGTACAGC+GGG 0.556856 6_4:+19578575 Msa0980920:CDS
TGGTGTTGTCTGATTTGGAG+AGG 0.557175 6_4:+19575276 Msa0980920:CDS
AAAGAAAGAATCTAGTTCAA+AGG 0.558489 6_4:+19574789 None:intergenic
ACTAGGATGATTGTTGTGTT+GGG 0.559232 6_4:-19574837 None:intergenic
TCTGGCACCCGAAATATCTC+GGG 0.564075 6_4:-19575098 None:intergenic
GGGGTCTGTAAGTTCAGTGT+TGG 0.565449 6_4:+19575205 Msa0980920:CDS
GAAATATCTCGGGTGCGCAT+TGG 0.566265 6_4:-19575088 None:intergenic
AAGGATTATTTCGATCAGAC+CGG 0.566785 6_4:+19577103 Msa0980920:CDS
GGTGTTGTCTGATTTGGAGA+GGG 0.570255 6_4:+19575277 Msa0980920:CDS
GTTCGTTGCCGATACAGAAA+GGG 0.571106 6_4:-19575064 None:intergenic
TATTTGTGAAATTCAACGTG+AGG 0.580301 6_4:+19577135 Msa0980920:CDS
TGATTTGGATTTGAAATCGG+AGG 0.586303 6_4:-19575009 None:intergenic
AATCCTTCATACTTCCAAGA+CGG 0.586376 6_4:-19577087 None:intergenic
TCTGACTCATCGCCATGCAG+TGG 0.591121 6_4:-19578518 None:intergenic
CAGTATAGAAGCTCAAGCCA+AGG 0.591350 6_4:-19579073 None:intergenic
AGAAGTGAATGTTCCAGAGT+CGG 0.601184 6_4:+19578664 Msa0980920:CDS
GATTTGGATTTGAAATCGGA+GGG 0.602181 6_4:-19575008 None:intergenic
CAGACCCCGTTTCATCATCA+GGG 0.603254 6_4:-19575190 None:intergenic
GAATCTTTGCAGCATCCTCA+GGG 0.604054 6_4:-19578637 None:intergenic
TCATCATCATCCAATCCCAC+TGG 0.604692 6_4:+19575032 Msa0980920:CDS
TAAAGTAGTTTATCCAAACA+AGG 0.610736 6_4:+19578940 Msa0980920:three_prime_UTR
TAGAAACATACTGTTAACCT+AGG 0.611828 6_4:+19578698 Msa0980920:exon
CAAGTTCGCGTGAAAGAGCA+GGG 0.620680 6_4:-19575163 None:intergenic
GTGTGAATCATAAAGTTGAA+CGG 0.626973 6_4:-19578491 None:intergenic
ATTAGGTGGAATAACGGGCA+GGG 0.632534 6_4:-19577056 None:intergenic
ATGTGCAATCCATCTTAAGA+GGG 0.634367 6_4:-19579033 None:intergenic
GAAAGGGCAACGAACACCAG+TGG 0.640523 6_4:-19575048 None:intergenic
AATAGAGCTTCCTCCAAACA+GGG 0.643640 6_4:-19578721 None:intergenic
AAAGGGCAACGAACACCAGT+GGG 0.646174 6_4:-19575047 None:intergenic
ATTGTGTCTTTACGAAGTTG+TGG 0.654144 6_4:-19574942 None:intergenic
AGACGGGCTGAAACATTAGG+TGG 0.656037 6_4:-19577070 None:intergenic
GCCTCAACTAATTGGTACAG+CGG 0.656139 6_4:+19578574 Msa0980920:CDS
CCCGCTGTACCAATTAGTTG+AGG 0.663084 6_4:-19578575 None:intergenic
TATCTCAAAAGGAAATGAAG+CGG 0.665656 6_4:-19577206 None:intergenic
ATTCACACAAGTCCACTGCA+TGG 0.668804 6_4:+19578506 Msa0980920:CDS
AAATGAGCAGAGTGATATCG+AGG 0.670405 6_4:-19577238 None:intergenic
TGAAACTCCGGATCATGATG+TGG 0.686786 6_4:+19575256 Msa0980920:CDS
CTGGTGAGAAGATAATCCAA+CGG 0.693199 6_4:-19574971 None:intergenic
CAGACCCTGATGATGAAACG+GGG 0.705989 6_4:+19575186 Msa0980920:CDS
TGAATCATAAAGTTGAACGG+CGG 0.737571 6_4:-19578488 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAGTTTTTTTATGCTATT+TGG + chr6_4:19575531-19575550 Msa0980920:intron 15.0%
!! AATATAGAATGAAGTATATT+AGG + chr6_4:19577963-19577982 Msa0980920:intron 15.0%
!! ATATAGAATGAAGTATATTA+GGG + chr6_4:19577964-19577983 Msa0980920:intron 15.0%
!! GGTTATAACTTATATAAAAA+TGG + chr6_4:19578844-19578863 Msa0980920:three_prime_UTR 15.0%
!!! TTTATTAGCTTATAAAAACA+AGG - chr6_4:19578966-19578985 None:intergenic 15.0%
!!! GAATATAGTTGTAATGATTT+TGG + chr6_4:19575390-19575409 Msa0980920:intron 20.0%
!! AAAAATGAATGAAAACTGTA+TGG + chr6_4:19575457-19575476 Msa0980920:intron 20.0%
!! TTTGTTTAATCTATATCCAA+CGG - chr6_4:19576035-19576054 None:intergenic 20.0%
!!! AAATTTCAAGCTTAGTATTT+TGG - chr6_4:19576092-19576111 None:intergenic 20.0%
!! AAAATACTAAGCTTGAAATT+TGG + chr6_4:19576091-19576110 Msa0980920:intron 20.0%
!!! TAATTTTAGTGTGGTAATTT+TGG + chr6_4:19576356-19576375 Msa0980920:intron 20.0%
!!! CTGAAAATCTTATATTTTCA+AGG - chr6_4:19576416-19576435 None:intergenic 20.0%
!!! AGATTTTCAGTTCTTAAAAT+TGG + chr6_4:19576426-19576445 Msa0980920:intron 20.0%
!! GACTTAACAAAATATATTTC+TGG + chr6_4:19576488-19576507 Msa0980920:intron 20.0%
!! TATAAAATGTTGTCAAATAG+CGG + chr6_4:19576807-19576826 Msa0980920:intron 20.0%
!!! TTGACTTAATTTTATCGAAA+CGG + chr6_4:19578868-19578887 Msa0980920:three_prime_UTR 20.0%
!! TGATGATTTGGATTTGAAAT+CGG - chr6_4:19575015-19575034 None:intergenic 25.0%
!!! TTTTTGTTGCTTATTGTGAT+AGG + chr6_4:19575315-19575334 Msa0980920:CDS 25.0%
! AAACTCTATCAAATATGTTC+AGG + chr6_4:19575358-19575377 Msa0980920:CDS 25.0%
!! TATAGTTGTAATGATTTTGG+TGG + chr6_4:19575393-19575412 Msa0980920:intron 25.0%
! TGCTCAATTTGAATATTGTA+AGG + chr6_4:19575503-19575522 Msa0980920:intron 25.0%
!! TGCATTGATATTGAATTGAA+AGG + chr6_4:19575724-19575743 Msa0980920:intron 25.0%
! TATTGAATTGAAAGGATGTT+TGG + chr6_4:19575732-19575751 Msa0980920:intron 25.0%
! ATGGAGTATATACATATTAG+TGG + chr6_4:19575900-19575919 Msa0980920:intron 25.0%
!! AATCAAGATTCTTTGAAGAT+GGG - chr6_4:19576176-19576195 None:intergenic 25.0%
!! AAATCAAGATTCTTTGAAGA+TGG - chr6_4:19576177-19576196 None:intergenic 25.0%
!!! CACTATACATAATTTTAGTG+TGG + chr6_4:19576347-19576366 Msa0980920:intron 25.0%
!!! AATATATTTCTGGTATGAGA+TGG + chr6_4:19576498-19576517 Msa0980920:intron 25.0%
! TTGAGTTCATTAATCTTTGA+AGG + chr6_4:19576970-19576989 Msa0980920:intron 25.0%
!! TTCACAAATAGAACATTTTC+CGG - chr6_4:19577125-19577144 None:intergenic 25.0%
! TTAAGCATTAATAGGACTTT+GGG - chr6_4:19577307-19577326 None:intergenic 25.0%
! TTTAAGCATTAATAGGACTT+TGG - chr6_4:19577308-19577327 None:intergenic 25.0%
! CTTTGCATTTAAGCATTAAT+AGG - chr6_4:19577315-19577334 None:intergenic 25.0%
! AAAAAAGACCTAGCATATAA+GGG - chr6_4:19577442-19577461 None:intergenic 25.0%
! AAAAAAAGACCTAGCATATA+AGG - chr6_4:19577443-19577462 None:intergenic 25.0%
!!! TATATGCTAGGTCTTTTTTT+AGG + chr6_4:19577443-19577462 Msa0980920:intron 25.0%
!!! ATATGCTAGGTCTTTTTTTA+GGG + chr6_4:19577444-19577463 Msa0980920:intron 25.0%
! TTGAATACTTAGATCTGAAA+TGG + chr6_4:19577475-19577494 Msa0980920:intron 25.0%
! AGAAATAATAAGAGCTAGAA+AGG - chr6_4:19577566-19577585 None:intergenic 25.0%
!! TATTATTTCTCTACATAGCT+CGG + chr6_4:19577576-19577595 Msa0980920:intron 25.0%
! AGAATTCTGAATAATACAGA+GGG - chr6_4:19578000-19578019 None:intergenic 25.0%
! TAGACATTCGGTAATAAAAA+GGG - chr6_4:19578205-19578224 None:intergenic 25.0%
! ATAGACATTCGGTAATAAAA+AGG - chr6_4:19578206-19578225 None:intergenic 25.0%
! CTATGATTATGATAGACATT+CGG - chr6_4:19578217-19578236 None:intergenic 25.0%
! TAAAGTAGTTTATCCAAACA+AGG + chr6_4:19578940-19578959 Msa0980920:three_prime_UTR 25.0%
! ATTGGATGATGATGATGATT+TGG - chr6_4:19575027-19575046 None:intergenic 30.0%
ATAACCCGAATTGGAAAATT+CGG + chr6_4:19575123-19575142 Msa0980920:CDS 30.0%
! ATAACCCGAATTTTCCAATT+CGG - chr6_4:19575131-19575150 None:intergenic 30.0%
! TGATGTTGTTATTGAAACTC+CGG + chr6_4:19575244-19575263 Msa0980920:CDS 30.0%
TGGATACTATATATTGCACA+TGG - chr6_4:19575856-19575875 None:intergenic 30.0%
! ATGACAAAATGTGCAGATTT+TGG + chr6_4:19576054-19576073 Msa0980920:intron 30.0%
!!! AATGTGCAGATTTTGGTTTT+TGG + chr6_4:19576061-19576080 Msa0980920:intron 30.0%
GTACACGTTCAATATTATTG+TGG + chr6_4:19576380-19576399 Msa0980920:intron 30.0%
!!! GAAAGTTTTATTCTCTTGGA+TGG - chr6_4:19576566-19576585 None:intergenic 30.0%
TATTCTGAATCACATCTAAG+AGG - chr6_4:19576654-19576673 None:intergenic 30.0%
TGTGGATCTTGGAATTATTA+TGG + chr6_4:19576676-19576695 Msa0980920:intron 30.0%
! GCATTAGTGTTGTTAAATAG+CGG + chr6_4:19576727-19576746 Msa0980920:intron 30.0%
GCTATAACACTATTGTATAG+TGG + chr6_4:19576829-19576848 Msa0980920:intron 30.0%
ACATAATGATGACTTGAAAC+AGG - chr6_4:19576944-19576963 None:intergenic 30.0%
!! TTGAAGGTGTTTAAAAACCA+TGG + chr6_4:19576986-19577005 Msa0980920:intron 30.0%
TGAAACATTAGGTGGAATAA+CGG - chr6_4:19577065-19577084 None:intergenic 30.0%
TATTTGTGAAATTCAACGTG+AGG + chr6_4:19577135-19577154 Msa0980920:CDS 30.0%
! ATCGACATACTTCTTTTCAT+TGG + chr6_4:19577174-19577193 Msa0980920:CDS 30.0%
TATCTCAAAAGGAAATGAAG+CGG - chr6_4:19577209-19577228 None:intergenic 30.0%
!!! CTTCATTTCCTTTTGAGATA+TGG + chr6_4:19577209-19577228 Msa0980920:CDS 30.0%
! GAAGATGAGTGTTATGATTT+TGG + chr6_4:19577413-19577432 Msa0980920:intron 30.0%
!!! TATGCTAGGTCTTTTTTTAG+GGG + chr6_4:19577445-19577464 Msa0980920:intron 30.0%
! GCTATTCTTTTGACAAAGAA+CGG - chr6_4:19577525-19577544 None:intergenic 30.0%
CCAGAACTACTATAAATATG+GGG - chr6_4:19577688-19577707 None:intergenic 30.0%
CCCAGAACTACTATAAATAT+GGG - chr6_4:19577689-19577708 None:intergenic 30.0%
CCCATATTTATAGTAGTTCT+GGG + chr6_4:19577686-19577705 Msa0980920:intron 30.0%
TCCCAGAACTACTATAAATA+TGG - chr6_4:19577690-19577709 None:intergenic 30.0%
AGTACAACTGTTATCAGATA+AGG - chr6_4:19577871-19577890 None:intergenic 30.0%
GAATTCTGAATAATACAGAG+GGG - chr6_4:19577999-19578018 None:intergenic 30.0%
GAGAATTCTGAATAATACAG+AGG - chr6_4:19578001-19578020 None:intergenic 30.0%
GTATTCCTTCTTTGATTACA+CGG - chr6_4:19578028-19578047 None:intergenic 30.0%
GTGTAATCAAAGAAGGAATA+CGG + chr6_4:19578027-19578046 Msa0980920:intron 30.0%
!! AACAGAAGCATAAAAGTATC+AGG - chr6_4:19578115-19578134 None:intergenic 30.0%
ATAAAAAGGGATCTATGCAA+GGG - chr6_4:19578192-19578211 None:intergenic 30.0%
AATAAAAAGGGATCTATGCA+AGG - chr6_4:19578193-19578212 None:intergenic 30.0%
TAATCATAGTAGATTGCTAC+AGG + chr6_4:19578228-19578247 Msa0980920:intron 30.0%
! GTTTGTTGAAACAAATGCTA+AGG + chr6_4:19578441-19578460 Msa0980920:CDS 30.0%
GTGTGAATCATAAAGTTGAA+CGG - chr6_4:19578494-19578513 None:intergenic 30.0%
TAGAAACATACTGTTAACCT+AGG + chr6_4:19578698-19578717 Msa0980920:exon 30.0%
!! CTTATACAGAAGCACTTATA+TGG + chr6_4:19578891-19578910 Msa0980920:three_prime_UTR 30.0%
!! TATAAAAACAAGGCCTTGTT+TGG - chr6_4:19578956-19578975 None:intergenic 30.0%
CACAATTGCTTAAGTTTGTA+TGG + chr6_4:19578997-19579016 Msa0980920:three_prime_UTR 30.0%
ACTAGGATGATTGTTGTGTT+GGG - chr6_4:19574840-19574859 None:intergenic 35.0%
!!! TGGTGAGTTTTGGTTTTTTG+AGG - chr6_4:19574925-19574944 None:intergenic 35.0%
ATTGTGTCTTTACGAAGTTG+TGG - chr6_4:19574945-19574964 None:intergenic 35.0%
! GATTTGGATTTGAAATCGGA+GGG - chr6_4:19575011-19575030 None:intergenic 35.0%
! TGATTTGGATTTGAAATCGG+AGG - chr6_4:19575012-19575031 None:intergenic 35.0%
! TTCCAATTCGGGTTATTATC+TGG - chr6_4:19575119-19575138 None:intergenic 35.0%
TAACCCGAATTGGAAAATTC+GGG + chr6_4:19575124-19575143 Msa0980920:CDS 35.0%
! TAACCCGAATTTTCCAATTC+GGG - chr6_4:19575130-19575149 None:intergenic 35.0%
TATAGTATCCATGTTTGTGC+CGG + chr6_4:19575865-19575884 Msa0980920:intron 35.0%
ACTCCATATCTATTGAACAC+CGG - chr6_4:19575887-19575906 None:intergenic 35.0%
AATTCAAGATGTCTGTGCAT+TGG + chr6_4:19576006-19576025 Msa0980920:intron 35.0%
CACAATACATGGGTAAACAT+TGG - chr6_4:19576133-19576152 None:intergenic 35.0%
TTAATGAAACCACGTATGTC+CGG - chr6_4:19576225-19576244 None:intergenic 35.0%
!! GTCATTTTGAGTGTCATATC+CGG + chr6_4:19576295-19576314 Msa0980920:intron 35.0%
TGTGCATATAAATGAAGCAC+AGG - chr6_4:19576329-19576348 None:intergenic 35.0%
TTGTTAAGCTTGACACTGTT+TGG + chr6_4:19576457-19576476 Msa0980920:intron 35.0%
!!! GGGAGAAAGTTTTATTCTCT+TGG - chr6_4:19576570-19576589 None:intergenic 35.0%
GATGTGATTCAGAATAGTTG+TGG + chr6_4:19576658-19576677 Msa0980920:intron 35.0%
TTCAGAATAGTTGTGGATCT+TGG + chr6_4:19576665-19576684 Msa0980920:intron 35.0%
TTAACAACACTAATGCGCAA+TGG - chr6_4:19576723-19576742 None:intergenic 35.0%
TTGCAGATCACAGAAAATAG+CGG - chr6_4:19576867-19576886 None:intergenic 35.0%
GAAACATTAGGTGGAATAAC+GGG - chr6_4:19577064-19577083 None:intergenic 35.0%
AATCCTTCATACTTCCAAGA+CGG - chr6_4:19577090-19577109 None:intergenic 35.0%
AAGGATTATTTCGATCAGAC+CGG + chr6_4:19577103-19577122 Msa0980920:CDS 35.0%
GGAACAATCCATATCTCAAA+AGG - chr6_4:19577220-19577239 None:intergenic 35.0%
! ACTTAGATCTGAAATGGTGT+TGG + chr6_4:19577481-19577500 Msa0980920:intron 35.0%
TAAGAGCTAGAAAGGAGAAA+AGG - chr6_4:19577558-19577577 None:intergenic 35.0%
CCCCATATTTATAGTAGTTC+TGG + chr6_4:19577685-19577704 Msa0980920:intron 35.0%
TCAACCATAGCATTCTTCTT+CGG - chr6_4:19577714-19577733 None:intergenic 35.0%
! TATGGTTGAAGCATTCTGAT+TGG + chr6_4:19577725-19577744 Msa0980920:intron 35.0%
ATAACGACATGTTCAAACTC+AGG - chr6_4:19577769-19577788 None:intergenic 35.0%
TCAAAGGTGAAACCATAACT+CGG - chr6_4:19577843-19577862 None:intergenic 35.0%
ATCAGATAAGGAGAACTCAA+AGG - chr6_4:19577859-19577878 None:intergenic 35.0%
! TTCTGGTTAGGAGAGAAAAA+GGG - chr6_4:19578070-19578089 None:intergenic 35.0%
!! TTTCTGGTTAGGAGAGAAAA+AGG - chr6_4:19578071-19578090 None:intergenic 35.0%
!! AGAAGCATAAAAGTATCAGG+AGG - chr6_4:19578112-19578131 None:intergenic 35.0%
TATCCTATAGCAATACCAGA+AGG - chr6_4:19578300-19578319 None:intergenic 35.0%
TATCTCGACATCTATGTTAC+AGG + chr6_4:19578403-19578422 Msa0980920:intron 35.0%
TGAATCATAAAGTTGAACGG+CGG - chr6_4:19578491-19578510 None:intergenic 35.0%
CAGAATTGGCATACAATCAT+TGG + chr6_4:19578537-19578556 Msa0980920:CDS 35.0%
! CTTACACAAGTTGTTTCCAT+AGG - chr6_4:19578775-19578794 None:intergenic 35.0%
AAGCTCTTCATGATAGCTTA+TGG + chr6_4:19578816-19578835 Msa0980920:three_prime_UTR 35.0%
TCATGATAGCTTATGGAAGT+AGG + chr6_4:19578823-19578842 Msa0980920:three_prime_UTR 35.0%
ATGTGCAATCCATCTTAAGA+GGG - chr6_4:19579036-19579055 None:intergenic 35.0%
TGTTGGGAACTAACTTCACT+TGG - chr6_4:19574824-19574843 None:intergenic 40.0%
GACTAGGATGATTGTTGTGT+TGG - chr6_4:19574841-19574860 None:intergenic 40.0%
!! GTTGTTGTTTGTGACTGACT+AGG - chr6_4:19574857-19574876 None:intergenic 40.0%
! TACGAAGTTGTGGTGAGTTT+TGG - chr6_4:19574935-19574954 None:intergenic 40.0%
AAGACACAATCTTCAACCGT+TGG + chr6_4:19574955-19574974 Msa0980920:CDS 40.0%
CTGGTGAGAAGATAATCCAA+CGG - chr6_4:19574974-19574993 None:intergenic 40.0%
TGCCAGATAATAACCCGAAT+TGG + chr6_4:19575114-19575133 Msa0980920:CDS 40.0%
! TCTGTAAGTTCAGTGTTGGA+TGG + chr6_4:19575209-19575228 Msa0980920:CDS 40.0%
! CTGTAAGTTCAGTGTTGGAT+GGG + chr6_4:19575210-19575229 Msa0980920:CDS 40.0%
!! TGATGTGGTGTTGTCTGATT+TGG + chr6_4:19575271-19575290 Msa0980920:CDS 40.0%
! ACACCTTAGCTCAAAAGTGT+AGG - chr6_4:19575578-19575597 None:intergenic 40.0%
! CTTTTGAGCTAAGGTGTGTT+TGG + chr6_4:19575581-19575600 Msa0980920:intron 40.0%
!! GTTTGGTGTACGAAATGTGT+TGG + chr6_4:19575749-19575768 Msa0980920:intron 40.0%
TTCGTCTTGAAGACGAATAG+TGG + chr6_4:19575958-19575977 Msa0980920:intron 40.0%
GCACAGACATCTTGAATTCA+GGG - chr6_4:19576004-19576023 None:intergenic 40.0%
TGCACAGACATCTTGAATTC+AGG - chr6_4:19576005-19576024 None:intergenic 40.0%
CTCATGCAGTCACAATACAT+GGG - chr6_4:19576143-19576162 None:intergenic 40.0%
ACTCATGCAGTCACAATACA+TGG - chr6_4:19576144-19576163 None:intergenic 40.0%
TATTGTGACTGCATGAGTTC+AGG + chr6_4:19576146-19576165 Msa0980920:intron 40.0%
ATTGTGACTGCATGAGTTCA+GGG + chr6_4:19576147-19576166 Msa0980920:intron 40.0%
! CAAGATTCTTTGAAGATGGG+AGG - chr6_4:19576173-19576192 None:intergenic 40.0%
TGTCTAACATGTATCTGTGC+CGG + chr6_4:19576203-19576222 Msa0980920:intron 40.0%
! TAGAGTGTCAGTGATAAGCT+GGG - chr6_4:19576590-19576609 None:intergenic 40.0%
! TTAGAGTGTCAGTGATAAGC+TGG - chr6_4:19576591-19576610 None:intergenic 40.0%
CACTAATGCGCAATGGAAAT+AGG - chr6_4:19576716-19576735 None:intergenic 40.0%
TGATCTGCAATTGACAACAC+TGG + chr6_4:19576877-19576896 Msa0980920:intron 40.0%
ATGATGACTTGAAACAGGTG+CGG - chr6_4:19576939-19576958 None:intergenic 40.0%
ATCCTTCATACTTCCAAGAC+GGG - chr6_4:19577089-19577108 None:intergenic 40.0%
AAAGGAAATGAAGCGGCATA+AGG - chr6_4:19577202-19577221 None:intergenic 40.0%
AAATGAGCAGAGTGATATCG+AGG - chr6_4:19577241-19577260 None:intergenic 40.0%
CTCTGCTCATTTCCATGAAT+TGG + chr6_4:19577249-19577268 Msa0980920:CDS 40.0%
! CCTTTTCAGCATCCAATTCA+TGG - chr6_4:19577264-19577283 None:intergenic 40.0%
CCATGAATTGGATGCTGAAA+AGG + chr6_4:19577261-19577280 Msa0980920:CDS 40.0%
CCTTAATCTATGCGTGACAT+GGG - chr6_4:19577366-19577385 None:intergenic 40.0%
TTTGGCAACCCTTATATGCT+AGG + chr6_4:19577431-19577450 Msa0980920:intron 40.0%
AAGGAGAAAAGGAGGAAGAA+AGG - chr6_4:19577547-19577566 None:intergenic 40.0%
AGAGTTCTCCAATCAATGTG+AGG + chr6_4:19577609-19577628 Msa0980920:intron 40.0%
GAGTTCTCCAATCAATGTGA+GGG + chr6_4:19577610-19577629 Msa0980920:intron 40.0%
AAATATGGGGAAAAACTCCC+AGG - chr6_4:19577675-19577694 None:intergenic 40.0%
GTATCAACCCACATATCAAG+GGG - chr6_4:19577821-19577840 None:intergenic 40.0%
GGTATCAACCCACATATCAA+GGG - chr6_4:19577822-19577841 None:intergenic 40.0%
!!! TGCCAGTTTTGAATCTGTAC+CGG - chr6_4:19577927-19577946 None:intergenic 40.0%
CAAAACTGGCACAGAAAAGA+AGG + chr6_4:19577936-19577955 Msa0980920:intron 40.0%
CTGATCCGTGTAATCAAAGA+AGG + chr6_4:19578020-19578039 Msa0980920:intron 40.0%
!! GAACTCACTCATTTCTGGTT+AGG - chr6_4:19578082-19578101 None:intergenic 40.0%
!! AAAAGTATCAGGAGGTAGCT+AGG - chr6_4:19578104-19578123 None:intergenic 40.0%
TAGTAGATTGCTACAGGTTG+TGG + chr6_4:19578234-19578253 Msa0980920:intron 40.0%
! TTGTGGATTTTGCAAAGCTC+TGG + chr6_4:19578251-19578270 Msa0980920:intron 40.0%
! TGTGGATTTTGCAAAGCTCT+GGG + chr6_4:19578252-19578271 Msa0980920:intron 40.0%
GAACCTTCTGGTATTGCTAT+AGG + chr6_4:19578294-19578313 Msa0980920:intron 40.0%
ATGTTACAGGCAGTTGATCT+TGG + chr6_4:19578416-19578435 Msa0980920:intron 40.0%
CAGATAGTGCCTCAACTAAT+TGG + chr6_4:19578566-19578585 Msa0980920:CDS 40.0%
! CATAAATCCAGTTTTCCCTG+AGG + chr6_4:19578622-19578641 Msa0980920:CDS 40.0%
AGAAGTGAATGTTCCAGAGT+CGG + chr6_4:19578664-19578683 Msa0980920:CDS 40.0%
TTCCAGAGTCGGAACAAAAA+AGG + chr6_4:19578675-19578694 Msa0980920:CDS 40.0%
!!! TACCTTTTTTGTTCCGACTC+TGG - chr6_4:19578680-19578699 None:intergenic 40.0%
AATAGAGCTTCCTCCAAACA+GGG - chr6_4:19578724-19578743 None:intergenic 40.0%
AAATAGAGCTTCCTCCAAAC+AGG - chr6_4:19578725-19578744 None:intergenic 40.0%
CTACTGTTTGAGAGAACCTA+TGG + chr6_4:19578756-19578775 Msa0980920:three_prime_UTR 40.0%
GACTTAAGTCCCTCTTAAGA+TGG + chr6_4:19579024-19579043 Msa0980920:three_prime_UTR 40.0%
GATGTGCAATCCATCTTAAG+AGG - chr6_4:19579037-19579056 None:intergenic 40.0%
TCATCATCATCCAATCCCAC+TGG + chr6_4:19575032-19575051 Msa0980920:CDS 45.0%
GTTCGTTGCCCTTTCTGTAT+CGG + chr6_4:19575056-19575075 Msa0980920:CDS 45.0%
GTTCGTTGCCGATACAGAAA+GGG - chr6_4:19575067-19575086 None:intergenic 45.0%
TGTTCGTTGCCGATACAGAA+AGG - chr6_4:19575068-19575087 None:intergenic 45.0%
AATGCGCACCCGAGATATTT+CGG + chr6_4:19575090-19575109 Msa0980920:CDS 45.0%
ATCTGGCACCCGAAATATCT+CGG - chr6_4:19575102-19575121 None:intergenic 45.0%
! TGCAGACCCTGATGATGAAA+CGG + chr6_4:19575184-19575203 Msa0980920:CDS 45.0%
! AGTTCAGTGTTGGATGGGTT+TGG + chr6_4:19575215-19575234 Msa0980920:CDS 45.0%
! GTTCAGTGTTGGATGGGTTT+GGG + chr6_4:19575216-19575235 Msa0980920:CDS 45.0%
TGAAACTCCGGATCATGATG+TGG + chr6_4:19575256-19575275 Msa0980920:CDS 45.0%
GACAACACCACATCATGATC+CGG - chr6_4:19575266-19575285 None:intergenic 45.0%
!! TGGTGTTGTCTGATTTGGAG+AGG + chr6_4:19575276-19575295 Msa0980920:CDS 45.0%
!! GGTGTTGTCTGATTTGGAGA+GGG + chr6_4:19575277-19575296 Msa0980920:CDS 45.0%
!! TTGTCTGATTTGGAGAGGGA+GGG + chr6_4:19575281-19575300 Msa0980920:CDS 45.0%
TGTGATAGGATTCGTGAGCT+TGG + chr6_4:19575329-19575348 Msa0980920:CDS 45.0%
GTGATAGGATTCGTGAGCTT+GGG + chr6_4:19575330-19575349 Msa0980920:CDS 45.0%
! GCACCTACACTTTTGAGCTA+AGG + chr6_4:19575572-19575591 Msa0980920:intron 45.0%
! GTCGAGTCTGTTGTTTGTGT+CGG + chr6_4:19575646-19575665 Msa0980920:intron 45.0%
! TGTTTGTGTCGGTGCTTCAT+AGG + chr6_4:19575657-19575676 Msa0980920:intron 45.0%
ATTGAACACCGGCACAAACA+TGG - chr6_4:19575876-19575895 None:intergenic 45.0%
! GTGCCGGTGTTCAATAGATA+TGG + chr6_4:19575881-19575900 Msa0980920:intron 45.0%
TCGTCTTCAAGACGAAGTGT+CGG - chr6_4:19575954-19575973 None:intergenic 45.0%
!! ATTAGGTGGAATAACGGGCA+GGG - chr6_4:19577059-19577078 None:intergenic 45.0%
CCCATGTCACGCATAGATTA+AGG + chr6_4:19577363-19577382 Msa0980920:intron 45.0%
GCCTTAATCTATGCGTGACA+TGG - chr6_4:19577367-19577386 None:intergenic 45.0%
GTCACGCATAGATTAAGGCT+CGG + chr6_4:19577368-19577387 Msa0980920:intron 45.0%
GAGCTAGAAAGGAGAAAAGG+AGG - chr6_4:19577555-19577574 None:intergenic 45.0%
TCCAATCAATGTGAGGGAGA+GGG + chr6_4:19577616-19577635 Msa0980920:intron 45.0%
! ATGAAGTGTCAGTCTGTACC+TGG + chr6_4:19577654-19577673 Msa0980920:intron 45.0%
! TGAAGTGTCAGTCTGTACCT+GGG + chr6_4:19577655-19577674 Msa0980920:intron 45.0%
GGATCCGAAGAAGAATGCTA+TGG + chr6_4:19577707-19577726 Msa0980920:intron 45.0%
AGCACTTTCCCCTTGATATG+TGG + chr6_4:19577810-19577829 Msa0980920:intron 45.0%
GCACTTTCCCCTTGATATGT+GGG + chr6_4:19577811-19577830 Msa0980920:intron 45.0%
CGGTATCAACCCACATATCA+AGG - chr6_4:19577823-19577842 None:intergenic 45.0%
!! TGTGGGTTGATACCGAGTTA+TGG + chr6_4:19577828-19577847 Msa0980920:intron 45.0%
TGATAAGAGGGAGCTCTCAT+TGG - chr6_4:19577896-19577915 None:intergenic 45.0%
AATGAGAGCTCCCTCTTATC+AGG + chr6_4:19577895-19577914 Msa0980920:intron 45.0%
!! GTTTTGAATCTGTACCGGGA+TGG - chr6_4:19577922-19577941 None:intergenic 45.0%
TCCCGGTACAGATTCAAAAC+TGG + chr6_4:19577922-19577941 Msa0980920:intron 45.0%
!!! GCCAGTTTTGAATCTGTACC+GGG - chr6_4:19577926-19577945 None:intergenic 45.0%
GCTAGGAACTCACTCATTTC+TGG - chr6_4:19578087-19578106 None:intergenic 45.0%
ATCATCGTAGGCGAGTAGAA+GGG - chr6_4:19578169-19578188 None:intergenic 45.0%
TCTATGCAAGGGATCATCGT+AGG - chr6_4:19578181-19578200 None:intergenic 45.0%
! TAGCATAGCACTGAACCTTC+TGG + chr6_4:19578282-19578301 Msa0980920:intron 45.0%
TTTCTCCAATTCTGCGCTTC+TGG + chr6_4:19578361-19578380 Msa0980920:intron 45.0%
TTACAGGCAGTTGATCTTGG+AGG + chr6_4:19578419-19578438 Msa0980920:intron 45.0%
ATTCACACAAGTCCACTGCA+TGG + chr6_4:19578506-19578525 Msa0980920:CDS 45.0%
GCCTCAACTAATTGGTACAG+CGG + chr6_4:19578574-19578593 Msa0980920:CDS 45.0%
CCTCAACTAATTGGTACAGC+GGG + chr6_4:19578575-19578594 Msa0980920:CDS 45.0%
GAATCTTTGCAGCATCCTCA+GGG - chr6_4:19578640-19578659 None:intergenic 45.0%
AGAATCTTTGCAGCATCCTC+AGG - chr6_4:19578641-19578660 None:intergenic 45.0%
CTGACATGATGACATCTCCT+TGG + chr6_4:19579056-19579075 Msa0980920:three_prime_UTR 45.0%
CAGTATAGAAGCTCAAGCCA+AGG - chr6_4:19579076-19579095 None:intergenic 45.0%
GGCTTGAGCTTCTATACTGT+TGG + chr6_4:19579077-19579096 Msa0980920:three_prime_UTR 45.0%
!! GAGGGTCGTTTTGATCTTGC+TGG - chr6_4:19574993-19575012 None:intergenic 50.0%
AAAGGGCAACGAACACCAGT+GGG - chr6_4:19575050-19575069 None:intergenic 50.0%
GAAATATCTCGGGTGCGCAT+TGG - chr6_4:19575091-19575110 None:intergenic 50.0%
ATGCGCACCCGAGATATTTC+GGG + chr6_4:19575091-19575110 Msa0980920:CDS 50.0%
TCTGGCACCCGAAATATCTC+GGG - chr6_4:19575101-19575120 None:intergenic 50.0%
CAAGTTCGCGTGAAAGAGCA+GGG - chr6_4:19575166-19575185 None:intergenic 50.0%
! GCAGACCCTGATGATGAAAC+GGG + chr6_4:19575185-19575204 Msa0980920:CDS 50.0%
! CAGACCCTGATGATGAAACG+GGG + chr6_4:19575186-19575205 Msa0980920:CDS 50.0%
CAGACCCCGTTTCATCATCA+GGG - chr6_4:19575193-19575212 None:intergenic 50.0%
ACAGACCCCGTTTCATCATC+AGG - chr6_4:19575194-19575213 None:intergenic 50.0%
GGGGTCTGTAAGTTCAGTGT+TGG + chr6_4:19575205-19575224 Msa0980920:CDS 50.0%
!! GTTGTCTGATTTGGAGAGGG+AGG + chr6_4:19575280-19575299 Msa0980920:CDS 50.0%
!! TGTCTGATTTGGAGAGGGAG+GGG + chr6_4:19575282-19575301 Msa0980920:CDS 50.0%
TGAAGCACAGGCACATACAC+CGG - chr6_4:19576317-19576336 None:intergenic 50.0%
!! ATAGCGGTGCTATAGCGTTG+CGG + chr6_4:19576743-19576762 Msa0980920:intron 50.0%
!! CATTAGGTGGAATAACGGGC+AGG - chr6_4:19577060-19577079 None:intergenic 50.0%
!! AGACGGGCTGAAACATTAGG+TGG - chr6_4:19577073-19577092 None:intergenic 50.0%
!! CCAAGACGGGCTGAAACATT+AGG - chr6_4:19577076-19577095 None:intergenic 50.0%
CCTAATGTTTCAGCCCGTCT+TGG + chr6_4:19577073-19577092 Msa0980920:CDS 50.0%
! AGCCCGTCTTGGAAGTATGA+AGG + chr6_4:19577084-19577103 Msa0980920:CDS 50.0%
CTCCAATCAATGTGAGGGAG+AGG + chr6_4:19577615-19577634 Msa0980920:intron 50.0%
CCAATCAATGTGAGGGAGAG+GGG + chr6_4:19577617-19577636 Msa0980920:intron 50.0%
CAATCAATGTGAGGGAGAGG+GGG + chr6_4:19577618-19577637 Msa0980920:intron 50.0%
TCATCGTAGGCGAGTAGAAG+GGG - chr6_4:19578168-19578187 None:intergenic 50.0%
GATCATCGTAGGCGAGTAGA+AGG - chr6_4:19578170-19578189 None:intergenic 50.0%
! TCAGACCAGAAGCGCAGAAT+TGG - chr6_4:19578369-19578388 None:intergenic 50.0%
GCATGGCGATGAGTCAGAAT+TGG + chr6_4:19578523-19578542 Msa0980920:CDS 50.0%
CCCGCTGTACCAATTAGTTG+AGG - chr6_4:19578578-19578597 None:intergenic 50.0%
CTGTTAACCTAGGCCCTGTT+TGG + chr6_4:19578708-19578727 Msa0980920:three_prime_UTR 50.0%
TTAACCTAGGCCCTGTTTGG+AGG + chr6_4:19578711-19578730 Msa0980920:three_prime_UTR 50.0%
GCAACGAACACCAGTGGGAT+TGG - chr6_4:19575045-19575064 None:intergenic 55.0%
GAAAGGGCAACGAACACCAG+TGG - chr6_4:19575051-19575070 None:intergenic 55.0%
GCAAGTTCGCGTGAAAGAGC+AGG - chr6_4:19575167-19575186 None:intergenic 55.0%
GATTTGGAGAGGGAGGGGAT+TGG + chr6_4:19575287-19575306 Msa0980920:CDS 55.0%
! GTCTGTGCATTGGTGACCGT+TGG + chr6_4:19576016-19576035 Msa0980920:intron 55.0%
GTATCTGTGCCGGACATACG+TGG + chr6_4:19576213-19576232 Msa0980920:intron 55.0%
AAAAACCATGGCGCTGCAGC+TGG + chr6_4:19576998-19577017 Msa0980920:CDS 55.0%
CCCCTCTCCCTCACATTGAT+TGG - chr6_4:19577620-19577639 None:intergenic 55.0%
CCGGGATGGACCTGATAAGA+GGG - chr6_4:19577908-19577927 None:intergenic 55.0%
CCCTCTTATCAGGTCCATCC+CGG + chr6_4:19577905-19577924 Msa0980920:intron 55.0%
ACCGGGATGGACCTGATAAG+AGG - chr6_4:19577909-19577928 None:intergenic 55.0%
CATCGTAGGCGAGTAGAAGG+GGG - chr6_4:19578167-19578186 None:intergenic 55.0%
TCTGACTCATCGCCATGCAG+TGG - chr6_4:19578521-19578540 None:intergenic 55.0%
GCAGCATCCTCAGGGAAAAC+TGG - chr6_4:19578632-19578651 None:intergenic 55.0%
GCTTCCTCCAAACAGGGCCT+AGG - chr6_4:19578718-19578737 None:intergenic 60.0%
! GGAGAGGGAGGGGATTGGTG+AGG + chr6_4:19575292-19575311 Msa0980920:CDS 65.0%
ATGCACCAGCTGCAGCGCCA+TGG - chr6_4:19577006-19577025 None:intergenic 65.0%
GCGGGTTTCGAGCTCGCAAC+TGG + chr6_4:19578593-19578612 Msa0980920:CDS 65.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 19574803 19579125 19574803 ID=Msa0980920;Name=Msa0980920
chr6_4 mRNA 19574803 19579125 19574803 ID=Msa0980920-mRNA-1;Parent=Msa0980920;Name=Msa0980920-mRNA-1;_AED=0.01;_eAED=0.01;_QI=91|1|1|1|1|1|3|425|350
chr6_4 exon 19574803 19575379 19574803 ID=Msa0980920-mRNA-1:exon:6080;Parent=Msa0980920-mRNA-1
chr6_4 exon 19576992 19577282 19576992 ID=Msa0980920-mRNA-1:exon:6081;Parent=Msa0980920-mRNA-1
chr6_4 exon 19578425 19579125 19578425 ID=Msa0980920-mRNA-1:exon:6082;Parent=Msa0980920-mRNA-1
chr6_4 five_prime_UTR 19574803 19574893 19574803 ID=Msa0980920-mRNA-1:five_prime_utr;Parent=Msa0980920-mRNA-1
chr6_4 CDS 19574894 19575379 19574894 ID=Msa0980920-mRNA-1:cds;Parent=Msa0980920-mRNA-1
chr6_4 CDS 19576992 19577282 19576992 ID=Msa0980920-mRNA-1:cds;Parent=Msa0980920-mRNA-1
chr6_4 CDS 19578425 19578700 19578425 ID=Msa0980920-mRNA-1:cds;Parent=Msa0980920-mRNA-1
chr6_4 three_prime_UTR 19578701 19579125 19578701 ID=Msa0980920-mRNA-1:three_prime_utr;Parent=Msa0980920-mRNA-1
Gene Sequence

>Msa0980920

ATGTCATCATCTTCAACAACAACAACAACCTCAAAAAACCAAAACTCACCACAACTTCGTAAAGACACAATCTTCAACCGTTGGATTATCTTCTCACCAGCAAGATCAAAACGACCCTCCGATTTCAAATCCAAATCATCATCATCATCCAATCCCACTGGTGTTCGTTGCCCTTTCTGTATCGGCAACGAACACCAATGCGCACCCGAGATATTTCGGGTGCCAGATAATAACCCGAATTGGAAAATTCGGGTTATTGAGAATCTTTACCCTGCTCTTTCACGCGAACTTGCAGACCCTGATGATGAAACGGGGTCTGTAAGTTCAGTGTTGGATGGGTTTGGGTTTCATGATGTTGTTATTGAAACTCCGGATCATGATGTGGTGTTGTCTGATTTGGAGAGGGAGGGGATTGGTGAGGTTTTTGTTGCTTATTGTGATAGGATTCGTGAGCTTGGGAAAAGAAACTCTATCAAATATGTTCAGGTGTTTAAAAACCATGGCGCTGCAGCTGGTGCATCAATGAGTCATTCTCATAGTCAAATGATTGCCCTGCCCGTTATTCCACCTAATGTTTCAGCCCGTCTTGGAAGTATGAAGGATTATTTCGATCAGACCGGAAAATGTTCTATTTGTGAAATTCAACGTGAGGATCTAGTGATTGATTCATCGACATACTTCTTTTCATTGGTTCCTTATGCCGCTTCATTTCCTTTTGAGATATGGATTGTTCCTCGATATCACTCTGCTCATTTCCATGAATTGGATGCTGAAAAGGCAGTTGATCTTGGAGGTTTGTTGAAACAAATGCTAAGGAAGATATCATTGCAGTTGAACGATCCGCCGTTCAACTTTATGATTCACACAAGTCCACTGCATGGCGATGAGTCAGAATTGGCATACAATCATTGGTTTATACAGATAGTGCCTCAACTAATTGGTACAGCGGGTTTCGAGCTCGCAACTGGATGTTACATAAATCCAGTTTTCCCTGAGGATGCTGCAAAGATTCTAAGAGAAGTGAATGTTCCAGAGTCGGAACAAAAAAGGTAG
Protein sequence

>Msa0980920

MSSSSTTTTTSKNQNSPQLRKDTIFNRWIIFSPARSKRPSDFKSKSSSSSNPTGVRCPFCIGNEHQCAPEIFRVPDNNPNWKIRVIENLYPALSRELADPDDETGSVSSVLDGFGFHDVVIETPDHDVVLSDLEREGIGEVFVAYCDRIRELGKRNSIKYVQVFKNHGAAAGASMSHSHSQMIALPVIPPNVSARLGSMKDYFDQTGKCSICEIQREDLVIDSSTYFFSLVPYAASFPFEIWIVPRYHSAHFHELDAEKAVDLGGLLKQMLRKISLQLNDPPFNFMIHTSPLHGDESELAYNHWFIQIVPQLIGTAGFELATGCYINPVFPEDAAKILREVNVPESEQKR*