AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0944630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0944630 MtrunA17_Chr6g0461471 95.000 340 16 1 5 343 2 341 0.0 660
Msa0944630 MtrunA17_Chr6g0461511 62.824 347 127 1 4 350 23 367 1.53e-158 456
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0944630 AT5G18200.1 62.500 336 122 3 10 343 17 350 1.87e-162 458

Find 112 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGCTCATTTCCATGAAT+TGG 0.232171 6_3:+21580024 Msa0944630:CDS
AGTTCGGTGTTGGATGGGTT+TGG 0.297896 6_3:+21577992 Msa0944630:CDS
TACGAAGCTGTGGTGAGTTT+TGG 0.306156 6_3:-21577706 None:intergenic
CACAATTGCTTAAGTTTGTA+TGG 0.322472 6_3:+21581778 Msa0944630:three_prime_UTR
GTTCGGTGTTGGATGGGTTT+GGG 0.323185 6_3:+21577993 Msa0944630:CDS
CAGATAGTGCCTCAACTAAT+TGG 0.326472 6_3:+21581347 Msa0944630:CDS
ATAACCCGAACTGGAAAATT+CGG 0.327308 6_3:+21577900 Msa0944630:CDS
CAGAATTGGCATACAATCAT+TGG 0.328541 6_3:+21581318 Msa0944630:CDS
GCAGCATCCTCAGGGAAAAC+TGG 0.337155 6_3:-21581410 None:intergenic
AAGCTCTTCATGATAGCTTA+TGG 0.338510 6_3:+21581597 Msa0944630:three_prime_UTR
TGATGTGGTGTTGTCTGATT+TGG 0.356261 6_3:+21578048 Msa0944630:CDS
AATGTGCACCCGAGATATTT+CGG 0.359620 6_3:+21577867 Msa0944630:CDS
CTTATACAGAAGCACTTATA+TGG 0.359670 6_3:+21581672 Msa0944630:three_prime_UTR
ATGTGCACCCGAGATATTTC+GGG 0.362159 6_3:+21577868 Msa0944630:CDS
AAATAGAGCTTCCTCCAAAC+AGG 0.366855 6_3:-21581503 None:intergenic
ACAGACCCCGTTTCATCAAC+CGG 0.379743 6_3:-21577968 None:intergenic
CCATGAATTGGATGCTGAAA+AGG 0.387668 6_3:+21580036 Msa0944630:CDS
TCTGTAAGTTCGGTGTTGGA+TGG 0.389513 6_3:+21577986 Msa0944630:CDS
AGAATCTTTGCAGCATCCTC+AGG 0.393557 6_3:-21581419 None:intergenic
GCGGACCCGGTTGATGAAAC+GGG 0.395278 6_3:+21577962 Msa0944630:CDS
CTGTTAACCTAGGCCCTGTT+TGG 0.404263 6_3:+21581489 Msa0944630:three_prime_UTR
GCGGGTTTCGAGCTCGCAAC+TGG 0.404379 6_3:+21581374 Msa0944630:CDS
TGATGATTTGGATTTGAAAT+CGG 0.408535 6_3:-21577786 None:intergenic
GGCTTGAGCTTCTATACTGT+TGG 0.412288 6_3:+21581858 Msa0944630:three_prime_UTR
TGCGGACCCGGTTGATGAAA+CGG 0.412625 6_3:+21577961 Msa0944630:CDS
TGTCTGATTTGGAGAGGGAG+GGG 0.419011 6_3:+21578059 Msa0944630:CDS
ATGTTACAGGCAGTTGATCT+TGG 0.420056 6_3:+21581197 Msa0944630:intron
AAACTCTATCAAATATGTTC+AGG 0.420894 6_3:+21578135 Msa0944630:CDS
CCAAGACGGGCTGAAACATT+AGG 0.431537 6_3:-21579848 None:intergenic
TAACCCGAACTGGAAAATTC+GGG 0.440212 6_3:+21577901 Msa0944630:CDS
GTGATAGGATTCGTGAGCTT+GGG 0.442215 6_3:+21578107 Msa0944630:CDS
GACTTAAGTCCCTCTTAAGA+TGG 0.446531 6_3:+21581805 Msa0944630:three_prime_UTR
TGCCAGCTAATAACCCGAAC+TGG 0.449157 6_3:+21577891 Msa0944630:CDS
TTCACGCGAACTTGCGGACC+CGG 0.450708 6_3:+21577949 Msa0944630:CDS
GCATGGCGATGAGTCAGAAT+TGG 0.451891 6_3:+21581304 Msa0944630:CDS
TTCCAGTTCGGGTTATTAGC+TGG 0.452274 6_3:-21577893 None:intergenic
GTTCGTTGCCCGTTCTGTAT+CGG 0.453200 6_3:+21577833 Msa0944630:CDS
TGTGATAGGATTCGTGAGCT+TGG 0.455222 6_3:+21578106 Msa0944630:CDS
CTACTGTTTGAGAGAACCTA+TGG 0.460131 6_3:+21581537 Msa0944630:three_prime_UTR
GGAACAATCCATATCTCAAA+AGG 0.462175 6_3:-21579992 None:intergenic
CTGTAAGTTCGGTGTTGGAT+GGG 0.462541 6_3:+21577987 Msa0944630:CDS
AGCTGGCACCCGAAATATCT+CGG 0.463129 6_3:-21577876 None:intergenic
GCAACGAACACCAGTGGGAT+TGG 0.469085 6_3:-21577819 None:intergenic
TTGTCTGATTTGGAGAGGGA+GGG 0.478640 6_3:+21578058 Msa0944630:CDS
AGCCCGTCTTGGAAGTATGA+AGG 0.481150 6_3:+21579859 Msa0944630:CDS
GATTTGGAGAGGGAGGGGAT+TGG 0.483449 6_3:+21578064 Msa0944630:CDS
TTAACCTAGGCCCTGTTTGG+AGG 0.487202 6_3:+21581492 Msa0944630:three_prime_UTR
CCTAATGTTTCAGCCCGTCT+TGG 0.487742 6_3:+21579848 Msa0944630:CDS
GTTGTCTGATTTGGAGAGGG+AGG 0.487874 6_3:+21578057 Msa0944630:CDS
AAAGGAAATGAAGCGGCATA+AGG 0.490064 6_3:-21579974 None:intergenic
GTTCGTTGCCGATACAGAAC+GGG 0.490773 6_3:-21577841 None:intergenic
GCTTCCTCCAAACAGGGCCT+AGG 0.492163 6_3:-21581496 None:intergenic
GACTAGGATGATTGTTGTGT+TGG 0.497988 6_3:-21577621 None:intergenic
TGCTCTTTCACGCGAACTTG+CGG 0.499364 6_3:+21577943 Msa0944630:CDS
TGATGTTGTTATTGAAACTC+CGG 0.499632 6_3:+21578021 Msa0944630:CDS
TGTTGGGAACTAACTTCACT+TGG 0.501561 6_3:-21577604 None:intergenic
GCAAGTTCGCGTGAAAGAGC+AGG 0.501814 6_3:-21577941 None:intergenic
TGAAACGGGGTCTGTAAGTT+CGG 0.506441 6_3:+21577976 Msa0944630:CDS
GAAACATTAGGTGGAATAAC+GGG 0.507381 6_3:-21579836 None:intergenic
CTTATACAAGTTGTTTCCAT+AGG 0.510556 6_3:-21581553 None:intergenic
TGAAACATTAGGTGGAATAA+CGG 0.515108 6_3:-21579837 None:intergenic
ATCCTTCATACTTCCAAGAC+GGG 0.518956 6_3:-21579861 None:intergenic
TTACAGGCAGTTGATCTTGG+AGG 0.526027 6_3:+21581200 Msa0944630:intron
GACAACACCACATCATGATC+CGG 0.530034 6_3:-21578040 None:intergenic
AAGACACAATCTTCAACCGT+TGG 0.537507 6_3:+21577729 Msa0944630:CDS
GGAGAGGGAGGGGATTGGTG+AGG 0.538006 6_3:+21578069 Msa0944630:CDS
CTGACATGATGACATCTCCT+TGG 0.538865 6_3:+21581837 Msa0944630:three_prime_UTR
GTTTGTTGAAACAAATGCTA+AGG 0.542952 6_3:+21581222 Msa0944630:CDS
GATGTGCAATCCATCTTAAG+AGG 0.545567 6_3:-21581815 None:intergenic
GGGGTCTGTAAGTTCGGTGT+TGG 0.549390 6_3:+21577982 Msa0944630:CDS
CATTAGGTGGAATAACGGGC+AGG 0.552079 6_3:-21579832 None:intergenic
ATGCACCAGCTGCAGCGCCA+TGG 0.552085 6_3:-21579778 None:intergenic
CCTCAACTAATTGGTACAGC+GGG 0.556856 6_3:+21581356 Msa0944630:CDS
TGGTGTTGTCTGATTTGGAG+AGG 0.557175 6_3:+21578053 Msa0944630:CDS
AAAGAAAGAATCTAGTTCAA+AGG 0.558489 6_3:+21577572 None:intergenic
ACTAGGATGATTGTTGTGTT+GGG 0.559232 6_3:-21577620 None:intergenic
GTTGTTGTTTGTGACTGACT+AGG 0.563802 6_3:-21577637 None:intergenic
GCTGGCACCCGAAATATCTC+GGG 0.566741 6_3:-21577875 None:intergenic
AAGGATTATTTCGATCAGAC+CGG 0.566785 6_3:+21579878 Msa0944630:CDS
GGTGTTGTCTGATTTGGAGA+GGG 0.570255 6_3:+21578054 Msa0944630:CDS
TATTTGTGAAATTCAACGTG+AGG 0.580301 6_3:+21579910 Msa0944630:CDS
TGATTTGGATTTGAAATCGG+AGG 0.586303 6_3:-21577783 None:intergenic
AATCCTTCATACTTCCAAGA+CGG 0.586376 6_3:-21579862 None:intergenic
TGTTCGTTGCCGATACAGAA+CGG 0.589782 6_3:-21577842 None:intergenic
TCTGACTCATCGCCATGCAG+TGG 0.591121 6_3:-21581299 None:intergenic
CAGTATAGAAGCTCAAGCCA+AGG 0.591350 6_3:-21581854 None:intergenic
AGAAGTGAATGTTCCAGAGT+CGG 0.601184 6_3:+21581445 Msa0944630:CDS
GATTTGGATTTGAAATCGGA+GGG 0.602181 6_3:-21577782 None:intergenic
GAATCTTTGCAGCATCCTCA+GGG 0.604054 6_3:-21581418 None:intergenic
TCATCATCATCCAATCCCAC+TGG 0.604692 6_3:+21577809 Msa0944630:CDS
CAGACCCCGTTTCATCAACC+GGG 0.604794 6_3:-21577967 None:intergenic
TAAAGTAGTTTATCCAAACA+AGG 0.610736 6_3:+21581721 Msa0944630:three_prime_UTR
TAGAAACATACTGTTAACCT+AGG 0.611828 6_3:+21581479 Msa0944630:exon
CAAGTTCGCGTGAAAGAGCA+GGG 0.619386 6_3:-21577940 None:intergenic
AACGGGCAACGAACACCAGT+GGG 0.626515 6_3:-21577824 None:intergenic
GTGTGAATCATAAAGTTGAA+CGG 0.626973 6_3:-21581272 None:intergenic
GAAATATCTCGGGTGCACAT+TGG 0.630733 6_3:-21577865 None:intergenic
ATTAGGTGGAATAACGGGCA+GGG 0.632534 6_3:-21579831 None:intergenic
ATGTGCAATCCATCTTAAGA+GGG 0.634367 6_3:-21581814 None:intergenic
GAACGGGCAACGAACACCAG+TGG 0.640523 6_3:-21577825 None:intergenic
AATAGAGCTTCCTCCAAACA+GGG 0.643640 6_3:-21581502 None:intergenic
CGGACCCGGTTGATGAAACG+GGG 0.655340 6_3:+21577963 Msa0944630:CDS
AGACGGGCTGAAACATTAGG+TGG 0.656037 6_3:-21579845 None:intergenic
GCCTCAACTAATTGGTACAG+CGG 0.656139 6_3:+21581355 Msa0944630:CDS
CCCGCTGTACCAATTAGTTG+AGG 0.663084 6_3:-21581356 None:intergenic
TATCTCAAAAGGAAATGAAG+CGG 0.665656 6_3:-21579981 None:intergenic
ATTCACACAAGTCCACTGCA+TGG 0.668804 6_3:+21581287 Msa0944630:CDS
AAATGAGCAGAGTGATATCG+AGG 0.670405 6_3:-21580013 None:intergenic
ATTGTGTCTTTACGAAGCTG+TGG 0.677891 6_3:-21577716 None:intergenic
TGAAACTCCGGATCATGATG+TGG 0.686786 6_3:+21578033 Msa0944630:CDS
CTGGTGAGAAGATAATCCAA+CGG 0.693199 6_3:-21577745 None:intergenic
TGAATCATAAAGTTGAACGG+CGG 0.737571 6_3:-21581269 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAGAATGAAGTATATT+AGG + chr6_3:21580746-21580765 Msa0944630:intron 15.0%
!! ATATAGAATGAAGTATATTA+GGG + chr6_3:21580747-21580766 Msa0944630:intron 15.0%
!! GCTTATAACTTATATAAAAA+CGG + chr6_3:21581625-21581644 Msa0944630:three_prime_UTR 15.0%
!!! TTTATTAGCTTATAAAAACA+AGG - chr6_3:21581747-21581766 None:intergenic 15.0%
!!! GAATATAGTTGTAATGATTT+TGG + chr6_3:21578167-21578186 Msa0944630:intron 20.0%
!! AAAAATGAATGAAAACTGTA+TGG + chr6_3:21578231-21578250 Msa0944630:intron 20.0%
!!! TGTAGTTTTTTTATGCTATT+TGG + chr6_3:21578305-21578324 Msa0944630:intron 20.0%
!! TTTGTTTAATCTATATCCAA+CGG - chr6_3:21578809-21578828 None:intergenic 20.0%
!!! AAATTTCAAGCTTAGTATTT+TGG - chr6_3:21578866-21578885 None:intergenic 20.0%
!! AAAATACTAAGCTTGAAATT+TGG + chr6_3:21578865-21578884 Msa0944630:intron 20.0%
!!! TAATTTTAGTGTGGTAATTT+TGG + chr6_3:21579130-21579149 Msa0944630:intron 20.0%
!!! CTGAAAATCTTATATTTTCA+AGG - chr6_3:21579190-21579209 None:intergenic 20.0%
!!! AGATTTTCAGTTCTTAAAAT+TGG + chr6_3:21579200-21579219 Msa0944630:intron 20.0%
!! GACTTAACAAAATATATTTC+TGG + chr6_3:21579262-21579281 Msa0944630:intron 20.0%
!! TATAAAATGTTGTCAAATAG+CGG + chr6_3:21579582-21579601 Msa0944630:intron 20.0%
!!! TTGACTTAATTTTATCGAAA+CGG + chr6_3:21581649-21581668 Msa0944630:three_prime_UTR 20.0%
!! TGATGATTTGGATTTGAAAT+CGG - chr6_3:21577789-21577808 None:intergenic 25.0%
!!! TTTTTGTTGCTTATTGTGAT+AGG + chr6_3:21578092-21578111 Msa0944630:CDS 25.0%
! AAACTCTATCAAATATGTTC+AGG + chr6_3:21578135-21578154 Msa0944630:CDS 25.0%
!! TATAGTTGTAATGATTTTGG+TGG + chr6_3:21578170-21578189 Msa0944630:intron 25.0%
! TGCTCAATTTGAATATTGTA+AGG + chr6_3:21578277-21578296 Msa0944630:intron 25.0%
!! TGCATTGATATTGAATTGAA+AGG + chr6_3:21578498-21578517 Msa0944630:intron 25.0%
! TATTGAATTGAAAGGATGTT+TGG + chr6_3:21578506-21578525 Msa0944630:intron 25.0%
! ATGGAGTATATACATATTAG+TGG + chr6_3:21578674-21578693 Msa0944630:intron 25.0%
!! AATCAAGATTCTTTGAAGAT+GGG - chr6_3:21578950-21578969 None:intergenic 25.0%
!! AAATCAAGATTCTTTGAAGA+TGG - chr6_3:21578951-21578970 None:intergenic 25.0%
!!! CACTATACATAATTTTAGTG+TGG + chr6_3:21579121-21579140 Msa0944630:intron 25.0%
!!! AATATATTTCTGGTATGAGA+TGG + chr6_3:21579272-21579291 Msa0944630:intron 25.0%
! TATTCTGAATCACATCTAAT+AGG - chr6_3:21579428-21579447 None:intergenic 25.0%
! TTGAGTTCATTAATCTTTGA+AGG + chr6_3:21579745-21579764 Msa0944630:intron 25.0%
!! TTCACAAATAGAACATTTTC+CGG - chr6_3:21579900-21579919 None:intergenic 25.0%
! TTAAGCATTAATAGGACTTT+GGG - chr6_3:21580082-21580101 None:intergenic 25.0%
! TTTAAGCATTAATAGGACTT+TGG - chr6_3:21580083-21580102 None:intergenic 25.0%
! CTTTGCATTTAAGCATTAAT+AGG - chr6_3:21580090-21580109 None:intergenic 25.0%
! TTGAATACTTAGATCTGAAA+TGG + chr6_3:21580250-21580269 Msa0944630:intron 25.0%
! AGAAATAATAAGAGCTAGAA+AGG - chr6_3:21580341-21580360 None:intergenic 25.0%
!! TATTATTTCTCTACATAGCT+CGG + chr6_3:21580351-21580370 Msa0944630:intron 25.0%
! AGAATTCTGAATAATACAGA+GGG - chr6_3:21580783-21580802 None:intergenic 25.0%
! TAGACATTCGGTAATAAAAA+GGG - chr6_3:21580986-21581005 None:intergenic 25.0%
! ATAGACATTCGGTAATAAAA+AGG - chr6_3:21580987-21581006 None:intergenic 25.0%
! CTATGATTATGATAGACATT+CGG - chr6_3:21580998-21581017 None:intergenic 25.0%
! TAAAGTAGTTTATCCAAACA+AGG + chr6_3:21581721-21581740 Msa0944630:three_prime_UTR 25.0%
! TGATGTTGTTATTGAAACTC+CGG + chr6_3:21578021-21578040 Msa0944630:CDS 30.0%
TGGATACTATATATTGCACA+TGG - chr6_3:21578630-21578649 None:intergenic 30.0%
! ATGACAAAATGTGCAGATTT+TGG + chr6_3:21578828-21578847 Msa0944630:intron 30.0%
!!! AATGTGCAGATTTTGGTTTT+TGG + chr6_3:21578835-21578854 Msa0944630:intron 30.0%
GTACACGTTCAATATTATTG+TGG + chr6_3:21579154-21579173 Msa0944630:intron 30.0%
!!! GAGAGTTTTATTCTCTTGAA+TGG - chr6_3:21579340-21579359 None:intergenic 30.0%
TGTGGATCTTGGAATTATTA+TGG + chr6_3:21579450-21579469 Msa0944630:intron 30.0%
! GCATTAGTGTTGTTAAATAG+CGG + chr6_3:21579502-21579521 Msa0944630:intron 30.0%
GCTATAACACTATTGTATAG+TGG + chr6_3:21579604-21579623 Msa0944630:intron 30.0%
ACATAATGATGACTTGAAAC+AGG - chr6_3:21579719-21579738 None:intergenic 30.0%
!! TTGAAGGTGTTTAAAAACCA+TGG + chr6_3:21579761-21579780 Msa0944630:intron 30.0%
TGAAACATTAGGTGGAATAA+CGG - chr6_3:21579840-21579859 None:intergenic 30.0%
TATTTGTGAAATTCAACGTG+AGG + chr6_3:21579910-21579929 Msa0944630:CDS 30.0%
! ATCGACATACTTCTTTTCAT+TGG + chr6_3:21579949-21579968 Msa0944630:CDS 30.0%
TATCTCAAAAGGAAATGAAG+CGG - chr6_3:21579984-21580003 None:intergenic 30.0%
!!! CTTCATTTCCTTTTGAGATA+TGG + chr6_3:21579984-21580003 Msa0944630:CDS 30.0%
! GAAGATGAGTGTTATGATTT+TGG + chr6_3:21580188-21580207 Msa0944630:intron 30.0%
AAAAAAGACCTAGCATCTAA+GGG - chr6_3:21580217-21580236 None:intergenic 30.0%
AAAAAAAGACCTAGCATCTA+AGG - chr6_3:21580218-21580237 None:intergenic 30.0%
!!! TAGATGCTAGGTCTTTTTTT+AGG + chr6_3:21580218-21580237 Msa0944630:intron 30.0%
!!! AGATGCTAGGTCTTTTTTTA+GGG + chr6_3:21580219-21580238 Msa0944630:intron 30.0%
! GCTATTCTTTTGACAAAGAA+CGG - chr6_3:21580300-21580319 None:intergenic 30.0%
CCAGAACTACTATAAATATG+GGG - chr6_3:21580463-21580482 None:intergenic 30.0%
CCCAGAACTACTATAAATAT+GGG - chr6_3:21580464-21580483 None:intergenic 30.0%
CCCATATTTATAGTAGTTCT+GGG + chr6_3:21580461-21580480 Msa0944630:intron 30.0%
TCCCAGAACTACTATAAATA+TGG - chr6_3:21580465-21580484 None:intergenic 30.0%
AGTACAACTGTTATCAGATA+AGG - chr6_3:21580646-21580665 None:intergenic 30.0%
GAATTCTGAATAATACAGAG+GGG - chr6_3:21580782-21580801 None:intergenic 30.0%
GAGAATTCTGAATAATACAG+AGG - chr6_3:21580784-21580803 None:intergenic 30.0%
!! AACAGAAGCATAAAAGTATC+AGG - chr6_3:21580898-21580917 None:intergenic 30.0%
ATAAAAAGGGATCTATGCAA+GGG - chr6_3:21580973-21580992 None:intergenic 30.0%
AATAAAAAGGGATCTATGCA+AGG - chr6_3:21580974-21580993 None:intergenic 30.0%
TAATCATAGTAGATTGCTAC+AGG + chr6_3:21581009-21581028 Msa0944630:intron 30.0%
! GTTTGTTGAAACAAATGCTA+AGG + chr6_3:21581222-21581241 Msa0944630:CDS 30.0%
GTGTGAATCATAAAGTTGAA+CGG - chr6_3:21581275-21581294 None:intergenic 30.0%
TAGAAACATACTGTTAACCT+AGG + chr6_3:21581479-21581498 Msa0944630:exon 30.0%
! CTTATACAAGTTGTTTCCAT+AGG - chr6_3:21581556-21581575 None:intergenic 30.0%
!! CTTATACAGAAGCACTTATA+TGG + chr6_3:21581672-21581691 Msa0944630:three_prime_UTR 30.0%
!! TATAAAAACAAGGCCTTGTT+TGG - chr6_3:21581737-21581756 None:intergenic 30.0%
CACAATTGCTTAAGTTTGTA+TGG + chr6_3:21581778-21581797 Msa0944630:three_prime_UTR 30.0%
ACTAGGATGATTGTTGTGTT+GGG - chr6_3:21577623-21577642 None:intergenic 35.0%
!!! TGGTGAGTTTTGGTTTTTTG+AGG - chr6_3:21577699-21577718 None:intergenic 35.0%
! GATTTGGATTTGAAATCGGA+GGG - chr6_3:21577785-21577804 None:intergenic 35.0%
! TGATTTGGATTTGAAATCGG+AGG - chr6_3:21577786-21577805 None:intergenic 35.0%
! GGATGATGATGATGATGATT+TGG - chr6_3:21577801-21577820 None:intergenic 35.0%
ATAACCCGAACTGGAAAATT+CGG + chr6_3:21577900-21577919 Msa0944630:CDS 35.0%
! ATAACCCGAATTTTCCAGTT+CGG - chr6_3:21577908-21577927 None:intergenic 35.0%
TATAGTATCCATGTTTGTGC+CGG + chr6_3:21578639-21578658 Msa0944630:intron 35.0%
ACTCCATATCTATTGAACAC+CGG - chr6_3:21578661-21578680 None:intergenic 35.0%
AATTCAAGATGTCTGTGCAT+TGG + chr6_3:21578780-21578799 Msa0944630:intron 35.0%
CACAATACATGGGTAAACAT+TGG - chr6_3:21578907-21578926 None:intergenic 35.0%
TTAATGAAACCACGTATGTC+CGG - chr6_3:21578999-21579018 None:intergenic 35.0%
!! GTCATTTTGAGTGTCATATC+CGG + chr6_3:21579069-21579088 Msa0944630:intron 35.0%
TGTGCATATAAATGAAGCAC+AGG - chr6_3:21579103-21579122 None:intergenic 35.0%
TTGTTAAGCTTGACACTGTT+TGG + chr6_3:21579231-21579250 Msa0944630:intron 35.0%
GATGTGATTCAGAATAGTTG+TGG + chr6_3:21579432-21579451 Msa0944630:intron 35.0%
TTCAGAATAGTTGTGGATCT+TGG + chr6_3:21579439-21579458 Msa0944630:intron 35.0%
TTAACAACACTAATGCGCAA+TGG - chr6_3:21579498-21579517 None:intergenic 35.0%
TTGCAGATCACAGAAAATAG+CGG - chr6_3:21579642-21579661 None:intergenic 35.0%
GAAACATTAGGTGGAATAAC+GGG - chr6_3:21579839-21579858 None:intergenic 35.0%
AATCCTTCATACTTCCAAGA+CGG - chr6_3:21579865-21579884 None:intergenic 35.0%
AAGGATTATTTCGATCAGAC+CGG + chr6_3:21579878-21579897 Msa0944630:CDS 35.0%
GGAACAATCCATATCTCAAA+AGG - chr6_3:21579995-21580014 None:intergenic 35.0%
!!! GATGCTAGGTCTTTTTTTAG+GGG + chr6_3:21580220-21580239 Msa0944630:intron 35.0%
! ACTTAGATCTGAAATGGTGT+TGG + chr6_3:21580256-21580275 Msa0944630:intron 35.0%
TAAGAGCTAGAAAGGAGAAA+AGG - chr6_3:21580333-21580352 None:intergenic 35.0%
AGAGTTCTTCAATCAATGTG+AGG + chr6_3:21580384-21580403 Msa0944630:intron 35.0%
GAGTTCTTCAATCAATGTGA+GGG + chr6_3:21580385-21580404 Msa0944630:intron 35.0%
CCCCATATTTATAGTAGTTC+TGG + chr6_3:21580460-21580479 Msa0944630:intron 35.0%
TCAACCATAGCATTCTTCTT+CGG - chr6_3:21580489-21580508 None:intergenic 35.0%
! TATGGTTGAAGCATTCTGAT+TGG + chr6_3:21580500-21580519 Msa0944630:intron 35.0%
ATAACGACATGTTCAAACTC+AGG - chr6_3:21580544-21580563 None:intergenic 35.0%
TCAAAGGTGAAACCATAACT+CGG - chr6_3:21580618-21580637 None:intergenic 35.0%
ATCAGATAAGGAGAACTCAA+AGG - chr6_3:21580634-21580653 None:intergenic 35.0%
GTATTCCTTCTTTGATTGCA+CGG - chr6_3:21580811-21580830 None:intergenic 35.0%
GTGCAATCAAAGAAGGAATA+CGG + chr6_3:21580810-21580829 Msa0944630:intron 35.0%
! TTCTGGTTAGGAGAGAAAAA+GGG - chr6_3:21580853-21580872 None:intergenic 35.0%
!! TTTCTGGTTAGGAGAGAAAA+AGG - chr6_3:21580854-21580873 None:intergenic 35.0%
!! AGAAGCATAAAAGTATCAGG+AGG - chr6_3:21580895-21580914 None:intergenic 35.0%
TATCCTATAGCAATACCAGA+AGG - chr6_3:21581081-21581100 None:intergenic 35.0%
TGAATCATAAAGTTGAACGG+CGG - chr6_3:21581272-21581291 None:intergenic 35.0%
CAGAATTGGCATACAATCAT+TGG + chr6_3:21581318-21581337 Msa0944630:CDS 35.0%
AAGCTCTTCATGATAGCTTA+TGG + chr6_3:21581597-21581616 Msa0944630:three_prime_UTR 35.0%
ATGTGCAATCCATCTTAAGA+GGG - chr6_3:21581817-21581836 None:intergenic 35.0%
TGTTGGGAACTAACTTCACT+TGG - chr6_3:21577607-21577626 None:intergenic 40.0%
GACTAGGATGATTGTTGTGT+TGG - chr6_3:21577624-21577643 None:intergenic 40.0%
!! GTTGTTGTTTGTGACTGACT+AGG - chr6_3:21577640-21577659 None:intergenic 40.0%
ATTGTGTCTTTACGAAGCTG+TGG - chr6_3:21577719-21577738 None:intergenic 40.0%
AAGACACAATCTTCAACCGT+TGG + chr6_3:21577729-21577748 Msa0944630:CDS 40.0%
CTGGTGAGAAGATAATCCAA+CGG - chr6_3:21577748-21577767 None:intergenic 40.0%
AATGTGCACCCGAGATATTT+CGG + chr6_3:21577867-21577886 Msa0944630:CDS 40.0%
TAACCCGAACTGGAAAATTC+GGG + chr6_3:21577901-21577920 Msa0944630:CDS 40.0%
! TAACCCGAATTTTCCAGTTC+GGG - chr6_3:21577907-21577926 None:intergenic 40.0%
!! TGATGTGGTGTTGTCTGATT+TGG + chr6_3:21578048-21578067 Msa0944630:CDS 40.0%
! ACACCTTTGCTCAAAAGTGT+AGG - chr6_3:21578352-21578371 None:intergenic 40.0%
!! CTTTTGAGCAAAGGTGTGTT+TGG + chr6_3:21578355-21578374 Msa0944630:intron 40.0%
!! GTTTGGTGTACGAAATGTGT+TGG + chr6_3:21578523-21578542 Msa0944630:intron 40.0%
TTCGTCTTGAAGACGAATAG+TGG + chr6_3:21578732-21578751 Msa0944630:intron 40.0%
GCACAGACATCTTGAATTCA+GGG - chr6_3:21578778-21578797 None:intergenic 40.0%
TGCACAGACATCTTGAATTC+AGG - chr6_3:21578779-21578798 None:intergenic 40.0%
CTCATGCAGTCACAATACAT+GGG - chr6_3:21578917-21578936 None:intergenic 40.0%
ACTCATGCAGTCACAATACA+TGG - chr6_3:21578918-21578937 None:intergenic 40.0%
TATTGTGACTGCATGAGTTC+AGG + chr6_3:21578920-21578939 Msa0944630:intron 40.0%
ATTGTGACTGCATGAGTTCA+GGG + chr6_3:21578921-21578940 Msa0944630:intron 40.0%
! CAAGATTCTTTGAAGATGGG+AGG - chr6_3:21578947-21578966 None:intergenic 40.0%
TGTCTAACATGTATCTGTGC+CGG + chr6_3:21578977-21578996 Msa0944630:intron 40.0%
! TAGAGTGTCAGTGATAAGCT+GGG - chr6_3:21579364-21579383 None:intergenic 40.0%
! TTAGAGTGTCAGTGATAAGC+TGG - chr6_3:21579365-21579384 None:intergenic 40.0%
TGATCTGCAATTGACAACAC+TGG + chr6_3:21579652-21579671 Msa0944630:intron 40.0%
ATGATGACTTGAAACAGGTG+CGG - chr6_3:21579714-21579733 None:intergenic 40.0%
ATCCTTCATACTTCCAAGAC+GGG - chr6_3:21579864-21579883 None:intergenic 40.0%
AAAGGAAATGAAGCGGCATA+AGG - chr6_3:21579977-21579996 None:intergenic 40.0%
AAATGAGCAGAGTGATATCG+AGG - chr6_3:21580016-21580035 None:intergenic 40.0%
CTCTGCTCATTTCCATGAAT+TGG + chr6_3:21580024-21580043 Msa0944630:CDS 40.0%
! CCTTTTCAGCATCCAATTCA+TGG - chr6_3:21580039-21580058 None:intergenic 40.0%
CCATGAATTGGATGCTGAAA+AGG + chr6_3:21580036-21580055 Msa0944630:CDS 40.0%
CCTTAATCTATGCGTGACAT+GGG - chr6_3:21580141-21580160 None:intergenic 40.0%
AAGGAGAAAAGGAGGAAGAA+AGG - chr6_3:21580322-21580341 None:intergenic 40.0%
TTCAATCAATGTGAGGGAGA+GGG + chr6_3:21580391-21580410 Msa0944630:intron 40.0%
AAATATGGGGAAAAACTCCC+AGG - chr6_3:21580450-21580469 None:intergenic 40.0%
GTATCAACCCACATATCAAG+GGG - chr6_3:21580596-21580615 None:intergenic 40.0%
GGTATCAACCCACATATCAA+GGG - chr6_3:21580597-21580616 None:intergenic 40.0%
TTGAATCTACCGAACTGTAC+CGG - chr6_3:21580702-21580721 None:intergenic 40.0%
CAGTTCGGTAGATTCAAAAC+TGG + chr6_3:21580705-21580724 Msa0944630:intron 40.0%
CAAAACTGGCACAGAAAAGA+AGG + chr6_3:21580719-21580738 Msa0944630:intron 40.0%
!! GAACTCACTCATTTCTGGTT+AGG - chr6_3:21580865-21580884 None:intergenic 40.0%
!! AAAAGTATCAGGAGGTAGCT+AGG - chr6_3:21580887-21580906 None:intergenic 40.0%
TAGTAGATTGCTACAGGTTG+TGG + chr6_3:21581015-21581034 Msa0944630:intron 40.0%
! TTGTGGATTTTGCAAAGCTC+TGG + chr6_3:21581032-21581051 Msa0944630:intron 40.0%
! TGTGGATTTTGCAAAGCTCT+GGG + chr6_3:21581033-21581052 Msa0944630:intron 40.0%
GAACCTTCTGGTATTGCTAT+AGG + chr6_3:21581075-21581094 Msa0944630:intron 40.0%
TTTCTCCAATTCTGCACTTC+TGG + chr6_3:21581142-21581161 Msa0944630:intron 40.0%
TATCTCGACGTCTATGTTAC+AGG + chr6_3:21581184-21581203 Msa0944630:intron 40.0%
ATGTTACAGGCAGTTGATCT+TGG + chr6_3:21581197-21581216 Msa0944630:intron 40.0%
CAGATAGTGCCTCAACTAAT+TGG + chr6_3:21581347-21581366 Msa0944630:CDS 40.0%
! CATAAATCCAGTTTTCCCTG+AGG + chr6_3:21581403-21581422 Msa0944630:CDS 40.0%
AGAAGTGAATGTTCCAGAGT+CGG + chr6_3:21581445-21581464 Msa0944630:CDS 40.0%
TTCCAGAGTCGGAACAAAAA+AGG + chr6_3:21581456-21581475 Msa0944630:CDS 40.0%
!!! TACCTTTTTTGTTCCGACTC+TGG - chr6_3:21581461-21581480 None:intergenic 40.0%
AATAGAGCTTCCTCCAAACA+GGG - chr6_3:21581505-21581524 None:intergenic 40.0%
AAATAGAGCTTCCTCCAAAC+AGG - chr6_3:21581506-21581525 None:intergenic 40.0%
CTACTGTTTGAGAGAACCTA+TGG + chr6_3:21581537-21581556 Msa0944630:three_prime_UTR 40.0%
GACTTAAGTCCCTCTTAAGA+TGG + chr6_3:21581805-21581824 Msa0944630:three_prime_UTR 40.0%
GATGTGCAATCCATCTTAAG+AGG - chr6_3:21581818-21581837 None:intergenic 40.0%
! TACGAAGCTGTGGTGAGTTT+TGG - chr6_3:21577709-21577728 None:intergenic 45.0%
TCATCATCATCCAATCCCAC+TGG + chr6_3:21577809-21577828 Msa0944630:CDS 45.0%
TGTTCGTTGCCGATACAGAA+CGG - chr6_3:21577845-21577864 None:intergenic 45.0%
GAAATATCTCGGGTGCACAT+TGG - chr6_3:21577868-21577887 None:intergenic 45.0%
ATGTGCACCCGAGATATTTC+GGG + chr6_3:21577868-21577887 Msa0944630:CDS 45.0%
! TTCCAGTTCGGGTTATTAGC+TGG - chr6_3:21577896-21577915 None:intergenic 45.0%
TGAAACGGGGTCTGTAAGTT+CGG + chr6_3:21577976-21577995 Msa0944630:CDS 45.0%
!! TCTGTAAGTTCGGTGTTGGA+TGG + chr6_3:21577986-21578005 Msa0944630:CDS 45.0%
!! CTGTAAGTTCGGTGTTGGAT+GGG + chr6_3:21577987-21578006 Msa0944630:CDS 45.0%
TGAAACTCCGGATCATGATG+TGG + chr6_3:21578033-21578052 Msa0944630:CDS 45.0%
GACAACACCACATCATGATC+CGG - chr6_3:21578043-21578062 None:intergenic 45.0%
!! TGGTGTTGTCTGATTTGGAG+AGG + chr6_3:21578053-21578072 Msa0944630:CDS 45.0%
!! GGTGTTGTCTGATTTGGAGA+GGG + chr6_3:21578054-21578073 Msa0944630:CDS 45.0%
!! TTGTCTGATTTGGAGAGGGA+GGG + chr6_3:21578058-21578077 Msa0944630:CDS 45.0%
TGTGATAGGATTCGTGAGCT+TGG + chr6_3:21578106-21578125 Msa0944630:CDS 45.0%
GTGATAGGATTCGTGAGCTT+GGG + chr6_3:21578107-21578126 Msa0944630:CDS 45.0%
! GCACCTACACTTTTGAGCAA+AGG + chr6_3:21578346-21578365 Msa0944630:intron 45.0%
! GTCGAGTCTGTTGTTTGTGT+CGG + chr6_3:21578420-21578439 Msa0944630:intron 45.0%
! TGTTTGTGTCGGTGCTTCAT+AGG + chr6_3:21578431-21578450 Msa0944630:intron 45.0%
ATTGAACACCGGCACAAACA+TGG - chr6_3:21578650-21578669 None:intergenic 45.0%
! GTGCCGGTGTTCAATAGATA+TGG + chr6_3:21578655-21578674 Msa0944630:intron 45.0%
TCGTCTTCAAGACGAAGTGT+CGG - chr6_3:21578728-21578747 None:intergenic 45.0%
!! ATTAGGTGGAATAACGGGCA+GGG - chr6_3:21579834-21579853 None:intergenic 45.0%
CCCATGTCACGCATAGATTA+AGG + chr6_3:21580138-21580157 Msa0944630:intron 45.0%
GCCTTAATCTATGCGTGACA+TGG - chr6_3:21580142-21580161 None:intergenic 45.0%
GTCACGCATAGATTAAGGCT+CGG + chr6_3:21580143-21580162 Msa0944630:intron 45.0%
TTTGGCAACCCTTAGATGCT+AGG + chr6_3:21580206-21580225 Msa0944630:intron 45.0%
GAGCTAGAAAGGAGAAAAGG+AGG - chr6_3:21580330-21580349 None:intergenic 45.0%
CTTCAATCAATGTGAGGGAG+AGG + chr6_3:21580390-21580409 Msa0944630:intron 45.0%
TCAATCAATGTGAGGGAGAG+GGG + chr6_3:21580392-21580411 Msa0944630:intron 45.0%
! ATGAAGTGTCAGTCTGTACC+TGG + chr6_3:21580429-21580448 Msa0944630:intron 45.0%
! TGAAGTGTCAGTCTGTACCT+GGG + chr6_3:21580430-21580449 Msa0944630:intron 45.0%
GGATCCGAAGAAGAATGCTA+TGG + chr6_3:21580482-21580501 Msa0944630:intron 45.0%
AGCACTTTCCCCTTGATATG+TGG + chr6_3:21580585-21580604 Msa0944630:intron 45.0%
GCACTTTCCCCTTGATATGT+GGG + chr6_3:21580586-21580605 Msa0944630:intron 45.0%
CGGTATCAACCCACATATCA+AGG - chr6_3:21580598-21580617 None:intergenic 45.0%
!! TGTGGGTTGATACCGAGTTA+TGG + chr6_3:21580603-21580622 Msa0944630:intron 45.0%
TGATAAGAGGGAGCTCTCAT+TGG - chr6_3:21580671-21580690 None:intergenic 45.0%
AATGAGAGCTCCCTCTTATC+AGG + chr6_3:21580670-21580689 Msa0944630:intron 45.0%
TGAATCTACCGAACTGTACC+GGG - chr6_3:21580701-21580720 None:intergenic 45.0%
CTGATCCGTGCAATCAAAGA+AGG + chr6_3:21580803-21580822 Msa0944630:intron 45.0%
GCTAGGAACTCACTCATTTC+TGG - chr6_3:21580870-21580889 None:intergenic 45.0%
! TAGCATAGCACTGAACCTTC+TGG + chr6_3:21581063-21581082 Msa0944630:intron 45.0%
! TCAGACCAGAAGTGCAGAAT+TGG - chr6_3:21581150-21581169 None:intergenic 45.0%
TTACAGGCAGTTGATCTTGG+AGG + chr6_3:21581200-21581219 Msa0944630:intron 45.0%
ATTCACACAAGTCCACTGCA+TGG + chr6_3:21581287-21581306 Msa0944630:CDS 45.0%
GCCTCAACTAATTGGTACAG+CGG + chr6_3:21581355-21581374 Msa0944630:CDS 45.0%
CCTCAACTAATTGGTACAGC+GGG + chr6_3:21581356-21581375 Msa0944630:CDS 45.0%
GAATCTTTGCAGCATCCTCA+GGG - chr6_3:21581421-21581440 None:intergenic 45.0%
AGAATCTTTGCAGCATCCTC+AGG - chr6_3:21581422-21581441 None:intergenic 45.0%
CTGACATGATGACATCTCCT+TGG + chr6_3:21581837-21581856 Msa0944630:three_prime_UTR 45.0%
CAGTATAGAAGCTCAAGCCA+AGG - chr6_3:21581857-21581876 None:intergenic 45.0%
GGCTTGAGCTTCTATACTGT+TGG + chr6_3:21581858-21581877 Msa0944630:three_prime_UTR 45.0%
!! GAGGGTCGTTTTGATCTTGC+TGG - chr6_3:21577767-21577786 None:intergenic 50.0%
GTTCGTTGCCCGTTCTGTAT+CGG + chr6_3:21577833-21577852 Msa0944630:CDS 50.0%
GTTCGTTGCCGATACAGAAC+GGG - chr6_3:21577844-21577863 None:intergenic 50.0%
AGCTGGCACCCGAAATATCT+CGG - chr6_3:21577879-21577898 None:intergenic 50.0%
TGCCAGCTAATAACCCGAAC+TGG + chr6_3:21577891-21577910 Msa0944630:CDS 50.0%
CAAGTTCGCGTGAAAGAGCA+GGG - chr6_3:21577943-21577962 None:intergenic 50.0%
TGCTCTTTCACGCGAACTTG+CGG + chr6_3:21577943-21577962 Msa0944630:CDS 50.0%
ACAGACCCCGTTTCATCAAC+CGG - chr6_3:21577971-21577990 None:intergenic 50.0%
!! AGTTCGGTGTTGGATGGGTT+TGG + chr6_3:21577992-21578011 Msa0944630:CDS 50.0%
!! GTTCGGTGTTGGATGGGTTT+GGG + chr6_3:21577993-21578012 Msa0944630:CDS 50.0%
!! GTTGTCTGATTTGGAGAGGG+AGG + chr6_3:21578057-21578076 Msa0944630:CDS 50.0%
!! TGTCTGATTTGGAGAGGGAG+GGG + chr6_3:21578059-21578078 Msa0944630:CDS 50.0%
TGAAGCACAGGCACATACAC+CGG - chr6_3:21579091-21579110 None:intergenic 50.0%
!! ATAGCGGTGCTATAGCGTTG+CGG + chr6_3:21579518-21579537 Msa0944630:intron 50.0%
!! CATTAGGTGGAATAACGGGC+AGG - chr6_3:21579835-21579854 None:intergenic 50.0%
!! AGACGGGCTGAAACATTAGG+TGG - chr6_3:21579848-21579867 None:intergenic 50.0%
!! CCAAGACGGGCTGAAACATT+AGG - chr6_3:21579851-21579870 None:intergenic 50.0%
CCTAATGTTTCAGCCCGTCT+TGG + chr6_3:21579848-21579867 Msa0944630:CDS 50.0%
! AGCCCGTCTTGGAAGTATGA+AGG + chr6_3:21579859-21579878 Msa0944630:CDS 50.0%
CAATCAATGTGAGGGAGAGG+GGG + chr6_3:21580393-21580412 Msa0944630:intron 50.0%
ATCATCGTGCGAGTAGAAGG+GGG - chr6_3:21580950-21580969 None:intergenic 50.0%
GATCATCGTGCGAGTAGAAG+GGG - chr6_3:21580951-21580970 None:intergenic 50.0%
GGATCATCGTGCGAGTAGAA+GGG - chr6_3:21580952-21580971 None:intergenic 50.0%
GCATGGCGATGAGTCAGAAT+TGG + chr6_3:21581304-21581323 Msa0944630:CDS 50.0%
CCCGCTGTACCAATTAGTTG+AGG - chr6_3:21581359-21581378 None:intergenic 50.0%
CTGTTAACCTAGGCCCTGTT+TGG + chr6_3:21581489-21581508 Msa0944630:three_prime_UTR 50.0%
TTAACCTAGGCCCTGTTTGG+AGG + chr6_3:21581492-21581511 Msa0944630:three_prime_UTR 50.0%
GCAACGAACACCAGTGGGAT+TGG - chr6_3:21577822-21577841 None:intergenic 55.0%
AACGGGCAACGAACACCAGT+GGG - chr6_3:21577827-21577846 None:intergenic 55.0%
GCTGGCACCCGAAATATCTC+GGG - chr6_3:21577878-21577897 None:intergenic 55.0%
GCAAGTTCGCGTGAAAGAGC+AGG - chr6_3:21577944-21577963 None:intergenic 55.0%
!! TGCGGACCCGGTTGATGAAA+CGG + chr6_3:21577961-21577980 Msa0944630:CDS 55.0%
CAGACCCCGTTTCATCAACC+GGG - chr6_3:21577970-21577989 None:intergenic 55.0%
!! GGGGTCTGTAAGTTCGGTGT+TGG + chr6_3:21577982-21578001 Msa0944630:CDS 55.0%
GATTTGGAGAGGGAGGGGAT+TGG + chr6_3:21578064-21578083 Msa0944630:CDS 55.0%
! GTCTGTGCATTGGTGACCGT+TGG + chr6_3:21578790-21578809 Msa0944630:intron 55.0%
GTATCTGTGCCGGACATACG+TGG + chr6_3:21578987-21579006 Msa0944630:intron 55.0%
AAAAACCATGGCGCTGCAGC+TGG + chr6_3:21579773-21579792 Msa0944630:CDS 55.0%
CCGGGATGGACCTGATAAGA+GGG - chr6_3:21580683-21580702 None:intergenic 55.0%
CCCTCTTATCAGGTCCATCC+CGG + chr6_3:21580680-21580699 Msa0944630:intron 55.0%
ACCGGGATGGACCTGATAAG+AGG - chr6_3:21580684-21580703 None:intergenic 55.0%
AGGTCCATCCCGGTACAGTT+CGG + chr6_3:21580690-21580709 Msa0944630:intron 55.0%
TCTACCGAACTGTACCGGGA+TGG - chr6_3:21580697-21580716 None:intergenic 55.0%
GGGATCATCGTGCGAGTAGA+AGG - chr6_3:21580953-21580972 None:intergenic 55.0%
TCTGACTCATCGCCATGCAG+TGG - chr6_3:21581302-21581321 None:intergenic 55.0%
GCAGCATCCTCAGGGAAAAC+TGG - chr6_3:21581413-21581432 None:intergenic 55.0%
GAACGGGCAACGAACACCAG+TGG - chr6_3:21577828-21577847 None:intergenic 60.0%
TTCACGCGAACTTGCGGACC+CGG + chr6_3:21577949-21577968 Msa0944630:CDS 60.0%
!! GCGGACCCGGTTGATGAAAC+GGG + chr6_3:21577962-21577981 Msa0944630:CDS 60.0%
!! CGGACCCGGTTGATGAAACG+GGG + chr6_3:21577963-21577982 Msa0944630:CDS 60.0%
GCTTCCTCCAAACAGGGCCT+AGG - chr6_3:21581499-21581518 None:intergenic 60.0%
! GGAGAGGGAGGGGATTGGTG+AGG + chr6_3:21578069-21578088 Msa0944630:CDS 65.0%
ATGCACCAGCTGCAGCGCCA+TGG - chr6_3:21579781-21579800 None:intergenic 65.0%
GCGGGTTTCGAGCTCGCAAC+TGG + chr6_3:21581374-21581393 Msa0944630:CDS 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 21577586 21581906 21577586 ID=Msa0944630;Name=Msa0944630
chr6_3 mRNA 21577586 21581906 21577586 ID=Msa0944630-mRNA-1;Parent=Msa0944630;Name=Msa0944630-mRNA-1;_AED=0.01;_eAED=0.01;_QI=85|1|1|1|1|1|3|425|350
chr6_3 exon 21577586 21578156 21577586 ID=Msa0944630-mRNA-1:exon:6410;Parent=Msa0944630-mRNA-1
chr6_3 exon 21579767 21580057 21579767 ID=Msa0944630-mRNA-1:exon:6411;Parent=Msa0944630-mRNA-1
chr6_3 exon 21581206 21581906 21581206 ID=Msa0944630-mRNA-1:exon:6412;Parent=Msa0944630-mRNA-1
chr6_3 five_prime_UTR 21577586 21577670 21577586 ID=Msa0944630-mRNA-1:five_prime_utr;Parent=Msa0944630-mRNA-1
chr6_3 CDS 21577671 21578156 21577671 ID=Msa0944630-mRNA-1:cds;Parent=Msa0944630-mRNA-1
chr6_3 CDS 21579767 21580057 21579767 ID=Msa0944630-mRNA-1:cds;Parent=Msa0944630-mRNA-1
chr6_3 CDS 21581206 21581481 21581206 ID=Msa0944630-mRNA-1:cds;Parent=Msa0944630-mRNA-1
chr6_3 three_prime_UTR 21581482 21581906 21581482 ID=Msa0944630-mRNA-1:three_prime_utr;Parent=Msa0944630-mRNA-1
Gene Sequence

>Msa0944630

ATGTCATCATCTTCAACAACAACAACCTCAAAAAACCAAAACTCACCACAGCTTCGTAAAGACACAATCTTCAACCGTTGGATTATCTTCTCACCAGCAAGATCAAAACGACCCTCCGATTTCAAATCCAAATCATCATCATCATCATCCAATCCCACTGGTGTTCGTTGCCCGTTCTGTATCGGCAACGAACACCAATGTGCACCCGAGATATTTCGGGTGCCAGCTAATAACCCGAACTGGAAAATTCGGGTTATTCAGAATCTTTACCCTGCTCTTTCACGCGAACTTGCGGACCCGGTTGATGAAACGGGGTCTGTAAGTTCGGTGTTGGATGGGTTTGGGTTTCATGATGTTGTTATTGAAACTCCGGATCATGATGTGGTGTTGTCTGATTTGGAGAGGGAGGGGATTGGTGAGGTTTTTGTTGCTTATTGTGATAGGATTCGTGAGCTTGGGAAAAGAAACTCTATCAAATATGTTCAGGTGTTTAAAAACCATGGCGCTGCAGCTGGTGCATCAATGAGTCATTCTCATAGTCAAATGATTGCCCTGCCCGTTATTCCACCTAATGTTTCAGCCCGTCTTGGAAGTATGAAGGATTATTTCGATCAGACCGGAAAATGTTCTATTTGTGAAATTCAACGTGAGGATCTAGTGATTGATTCATCGACATACTTCTTTTCATTGGTTCCTTATGCCGCTTCATTTCCTTTTGAGATATGGATTGTTCCTCGATATCACTCTGCTCATTTCCATGAATTGGATGCTGAAAAGGCAGTTGATCTTGGAGGTTTGTTGAAACAAATGCTAAGGAAGATATCATTGCAGTTGAACGATCCGCCGTTCAACTTTATGATTCACACAAGTCCACTGCATGGCGATGAGTCAGAATTGGCATACAATCATTGGTTTATACAGATAGTGCCTCAACTAATTGGTACAGCGGGTTTCGAGCTCGCAACTGGATGTTACATAAATCCAGTTTTCCCTGAGGATGCTGCAAAGATTCTAAGAGAAGTGAATGTTCCAGAGTCGGAACAAAAAAGGTAG
Protein sequence

>Msa0944630

MSSSSTTTTSKNQNSPQLRKDTIFNRWIIFSPARSKRPSDFKSKSSSSSSNPTGVRCPFCIGNEHQCAPEIFRVPANNPNWKIRVIQNLYPALSRELADPVDETGSVSSVLDGFGFHDVVIETPDHDVVLSDLEREGIGEVFVAYCDRIRELGKRNSIKYVQVFKNHGAAAGASMSHSHSQMIALPVIPPNVSARLGSMKDYFDQTGKCSICEIQREDLVIDSSTYFFSLVPYAASFPFEIWIVPRYHSAHFHELDAEKAVDLGGLLKQMLRKISLQLNDPPFNFMIHTSPLHGDESELAYNHWFIQIVPQLIGTAGFELATGCYINPVFPEDAAKILREVNVPESEQKR*