AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0998870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0998870 MtrunA17_Chr8g0347531 99.125 343 2 1 1 342 1 343 0.0 694
Msa0998870 MtrunA17_Chr3g0101841 68.165 267 85 0 76 342 127 393 7.45e-134 386
Msa0998870 MtrunA17_Chr5g0446271 56.294 286 90 2 61 342 69 323 1.53e-108 320
Msa0998870 MtrunA17_Chr5g0406711 56.723 238 103 0 76 313 55 292 1.57e-97 292
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0998870 AT5G56760.1 86.194 268 36 1 76 342 45 312 1.48e-169 474
Msa0998870 AT1G55920.1 60.294 272 108 0 71 342 43 314 2.42e-121 352
Msa0998870 AT3G13110.1 61.798 267 102 0 76 342 125 391 6.72e-119 348
Msa0998870 AT4G35640.1 57.588 257 104 1 76 332 73 324 1.26e-95 288
Msa0998870 AT2G17640.1 55.253 257 110 1 76 332 36 287 2.08e-89 271

Find 153 sgRNAs with CRISPR-Local

Find 239 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTGCGGGTGCTACCATTC+TGG 0.182551 6_4:-80336572 Msa0998870:CDS
AAGAGGGATAGATGAGTTTA+AGG 0.200008 6_4:-80335869 Msa0998870:three_prime_UTR
TATTATTATACTTAAATTAC+AGG 0.257274 6_4:+80336186 None:intergenic
TGTGGAAAAGAAAAGTTATA+TGG 0.276298 6_4:+80338728 None:intergenic
CAAGGGATTTCTTGCTTGTC+AGG 0.306102 6_4:-80338158 Msa0998870:intron
TGGAATGGTATAGGATGTTT+TGG 0.319515 6_4:+80338748 None:intergenic
TTCTGGGTAATATTAAGATT+GGG 0.334846 6_4:-80336555 Msa0998870:CDS
GTAATTTAAGTATAATAATA+AGG 0.337907 6_4:-80336183 Msa0998870:three_prime_UTR
TGAGTTTAAGGTTCTGTCTA+TGG 0.342706 6_4:-80335857 Msa0998870:three_prime_UTR
TCGCAAAAGCGTTAAGAAAA+AGG 0.349769 6_4:+80338278 None:intergenic
GGATTGTGGTGGTTTGTTGT+GGG 0.350580 6_4:+80338569 None:intergenic
TTCCGCGTCGCGGCGTGCTT+CGG 0.365005 6_4:+80338429 None:intergenic
ATTCTGGGTAATATTAAGAT+TGG 0.368505 6_4:-80336556 Msa0998870:CDS
ATCAGACCACTCAGAGATAA+AGG 0.371873 6_4:+80336384 None:intergenic
CAGGTTCGGAATACAGAAAC+TGG 0.376392 6_4:-80336071 Msa0998870:three_prime_UTR
ATTGAGCGATGTATTAAAAC+AGG 0.377703 6_4:-80336090 Msa0998870:three_prime_UTR
CGGATTGTGGTGGTTTGTTG+TGG 0.379801 6_4:+80338568 None:intergenic
GAGCACCCCATCTCCAATCT+TGG 0.387961 6_4:+80336597 None:intergenic
GGTTGGTAACCCGGCGAGAT+TGG 0.391387 6_4:-80336470 Msa0998870:CDS
TATCATCAGAGCTATCTTGC+AGG 0.393180 6_4:-80335947 Msa0998870:three_prime_UTR
GTCGTTGGTGCCTCCGACGA+AGG 0.394214 6_4:-80338475 Msa0998870:CDS
GGTGGGACTGGAAAGGTTGG+TGG 0.399723 6_4:-80336631 Msa0998870:CDS
TTGGTGGTTGCCGCCTTTGG+TGG 0.399778 6_4:+80338508 None:intergenic
GGGGTGAGAAATTGGAATGG+TGG 0.403081 6_4:+80338590 None:intergenic
TTGTTGGTGGTTGCCGCCTT+TGG 0.404175 6_4:+80338505 None:intergenic
TGGTGGTTGCCGCCTTTGGT+GGG 0.412889 6_4:+80338509 None:intergenic
CGTTCACTTTCGTTTCATCT+TGG 0.416739 6_4:-80338346 Msa0998870:CDS
CATGTAACACTGGGTGGGAC+TGG 0.419239 6_4:-80336643 Msa0998870:CDS
GGTGCGGGTGCTACCATTCT+GGG 0.419338 6_4:-80336571 Msa0998870:CDS
TCTCAGCTTGAGGATGTGCC+CGG 0.426819 6_4:-80336427 Msa0998870:CDS
GTGGGTGAGACGGCGGTGAT+TGG 0.428760 6_4:-80336688 Msa0998870:CDS
GATGGGGTGCTCATTGGTGC+GGG 0.434437 6_4:-80336586 Msa0998870:CDS
TTGATTATGTTACTAGGACT+TGG 0.434511 6_4:-80336043 Msa0998870:three_prime_UTR
ATAGTGATGAGGTTCTTATA+TGG 0.436564 6_4:+80338631 None:intergenic
CCTTTGCCAATCCTCGCTGC+CGG 0.437728 6_4:+80336742 None:intergenic
TTGGTGCCTCCGACGAAGGC+TGG 0.437791 6_4:-80338471 Msa0998870:CDS
GGGGATCGGCATCCCAAGAT+TGG 0.448675 6_4:-80336610 Msa0998870:CDS
TGAAATCAAACACTTGATGT+TGG 0.450383 6_4:-80336330 Msa0998870:three_prime_UTR
AAAGTTATATGGAATGGTAT+AGG 0.453300 6_4:+80338739 None:intergenic
CAGTCCCACCCAGTGTTACA+TGG 0.453460 6_4:+80336644 None:intergenic
ATGAAATTTGCAACATTTGT+GGG 0.458043 6_4:+80338680 None:intergenic
GTCGAGCCTGCCTCCACAAT+AGG 0.458416 6_4:+80336824 None:intergenic
ATTGTGGTGGTTTGTTGTGG+GGG 0.462797 6_4:+80338571 None:intergenic
AGCACCCCATCTCCAATCTT+GGG 0.465916 6_4:+80336598 None:intergenic
ATTGGGGAAGGCGCTAAGAT+TGG 0.467802 6_4:-80336538 Msa0998870:CDS
CTTTGCCAATCCTCGCTGCC+GGG 0.470723 6_4:+80336743 None:intergenic
GACCACTGCGGTTGGTAACC+CGG 0.471995 6_4:-80336479 Msa0998870:CDS
GGCGAGATTGGTTGGTGGTA+AGG 0.473968 6_4:-80336458 Msa0998870:CDS
TAGAGGTAGCTTGCTAGGGC+TGG 0.476706 6_4:+80338400 None:intergenic
ACTCAGAGATAAAGGAAGTA+TGG 0.477194 6_4:+80336392 None:intergenic
GTGGGACTGGAAAGGTTGGT+GGG 0.479022 6_4:-80336630 Msa0998870:CDS
TTGAGTAGAGGTAGCTTGCT+AGG 0.480386 6_4:+80338395 None:intergenic
GGCGCACCTATTGTGGAGGC+AGG 0.481206 6_4:-80336830 Msa0998870:CDS
CTGGAAAGGTTGGTGGGGAT+CGG 0.483329 6_4:-80336624 Msa0998870:CDS
GATTGTGGTGGTTTGTTGTG+GGG 0.486264 6_4:+80338570 None:intergenic
GGGTGAGAAATTGGAATGGT+GGG 0.486923 6_4:+80338591 None:intergenic
TCACTGTTTGCTTAATTACA+AGG 0.488533 6_4:-80338176 Msa0998870:CDS
GAAGGCGCTAAGATTGGTGC+CGG 0.488591 6_4:-80336532 Msa0998870:CDS
GGATGTGCCCGGGGAGTCCA+TGG 0.491417 6_4:-80336416 Msa0998870:CDS
CGGCATCCCAAGATTGGAGA+TGG 0.491967 6_4:-80336604 Msa0998870:CDS
CTCAGCTTGAGGATGTGCCC+GGG 0.494227 6_4:-80336426 Msa0998870:CDS
CCTCCGACGAAGGCTGGCTA+TGG 0.494886 6_4:-80338465 Msa0998870:CDS
TTATGTGTGTGCTATTATTG+TGG 0.495115 6_4:+80338710 None:intergenic
AGGGGTAGTGGTGGGTGAGA+CGG 0.497668 6_4:-80336698 Msa0998870:CDS
TGACCACGCCACAGGGGTAG+TGG 0.497766 6_4:-80336710 Msa0998870:CDS
AATCTTAATATTACCCAGAA+TGG 0.498470 6_4:+80336558 None:intergenic
GTTCGCCGGTCGGCATTGAT+CGG 0.499229 6_4:+80338545 None:intergenic
ATCATCAGAGCTATCTTGCA+GGG 0.499687 6_4:-80335946 Msa0998870:three_prime_UTR
CATGAAATTTGCAACATTTG+TGG 0.500983 6_4:+80338679 None:intergenic
ACCAACGACGGCGGAGTTGT+TGG 0.501003 6_4:+80338489 None:intergenic
CGGCAGCGAGGATTGGCAAA+GGG 0.505970 6_4:-80336741 Msa0998870:CDS
GCGATGTATTAAAACAGGTT+CGG 0.506545 6_4:-80336085 Msa0998870:three_prime_UTR
CACCCAGTGTTACATGGTGC+AGG 0.509289 6_4:+80336650 None:intergenic
TGGGACTGGAAAGGTTGGTG+GGG 0.516350 6_4:-80336629 Msa0998870:CDS
CACTTGATGTTGGATTTGCA+CGG 0.521321 6_4:-80336320 Msa0998870:three_prime_UTR
ATTGGAGATGGGGTGCTCAT+TGG 0.522662 6_4:-80336592 Msa0998870:CDS
GGTGGTTGCCGCCTTTGGTG+GGG 0.527306 6_4:+80338510 None:intergenic
GGTGAGAAATTGGAATGGTG+GGG 0.529441 6_4:+80338592 None:intergenic
CGGCATTGATCGGCGGATTG+TGG 0.530373 6_4:+80338555 None:intergenic
AGATGGGGTGCTCATTGGTG+CGG 0.531704 6_4:-80336587 Msa0998870:CDS
GAGAGAGAATCGTTGAGTAG+AGG 0.532015 6_4:+80338383 None:intergenic
AGTATGGTCCATGGACTCCC+CGG 0.532177 6_4:+80336408 None:intergenic
TTATATCATTTAAATTTCCA+AGG 0.532753 6_4:-80336362 Msa0998870:exon
AACGACGGCGGAGTTGTTGG+TGG 0.533628 6_4:+80338492 None:intergenic
CACTGTTTGCTTAATTACAA+GGG 0.534624 6_4:-80338175 Msa0998870:CDS
CCACGCCACAGGGGTAGTGG+TGG 0.535874 6_4:-80336707 Msa0998870:CDS
GGTAACCCGGCGAGATTGGT+TGG 0.536148 6_4:-80336466 Msa0998870:CDS
AAAAGAAAAGTTATATGGAA+TGG 0.545737 6_4:+80338733 None:intergenic
TTCTGTCTATGGTGAGAGAT+CGG 0.546182 6_4:-80335846 Msa0998870:three_prime_UTR
CATTGATCGGCGGATTGTGG+TGG 0.553944 6_4:+80338558 None:intergenic
GAATGTAGTGCTAGTGCTAA+CGG 0.555892 6_4:+80336799 None:intergenic
CTGGGTGGGACTGGAAAGGT+TGG 0.561509 6_4:-80336634 Msa0998870:CDS
ACCAACAACTCCGCCGTCGT+TGG 0.561683 6_4:-80338490 Msa0998870:CDS
TGAGTAGAGGTAGCTTGCTA+GGG 0.564115 6_4:+80338396 None:intergenic
TTACCACCAACCAATCTCGC+CGG 0.567372 6_4:+80336460 None:intergenic
GGCATCCCAAGATTGGAGAT+GGG 0.569442 6_4:-80336603 Msa0998870:CDS
CTTTCTTGTGATGTTTCAAG+AGG 0.570248 6_4:-80335886 Msa0998870:three_prime_UTR
GGCACATCCTCAAGCTGAGA+CGG 0.571158 6_4:+80336430 None:intergenic
TACCACCAACCAATCTCGCC+GGG 0.571788 6_4:+80336461 None:intergenic
GGTAATATTAAGATTGGGGA+AGG 0.571875 6_4:-80336550 Msa0998870:CDS
TGAGAGTAAGAGATACAAGC+AGG 0.576379 6_4:+80338196 None:intergenic
AGCCGAAGCACGCCGCGACG+CGG 0.578947 6_4:-80338431 Msa0998870:CDS
GGTAGTGGTGGGTGAGACGG+CGG 0.579689 6_4:-80336695 Msa0998870:CDS
GATAAAGGAAGTATGGTCCA+TGG 0.580589 6_4:+80336399 None:intergenic
TCGCGTCGCTGATGTATTCG+CGG 0.580907 6_4:-80336776 Msa0998870:CDS
CCGGCAGCGAGGATTGGCAA+AGG 0.581850 6_4:-80336742 Msa0998870:CDS
TGACCATAGCCAGCCTTCGT+CGG 0.583200 6_4:+80338462 None:intergenic
TCTGGGTAATATTAAGATTG+GGG 0.583983 6_4:-80336554 Msa0998870:CDS
GGATAGTGTCCATGGATGGA+TGG 0.586329 6_4:+80338834 None:intergenic
ATCCGCCGATCAATGCCGAC+CGG 0.588986 6_4:-80338550 Msa0998870:CDS
GGCAGCGAGGATTGGCAAAG+GGG 0.592605 6_4:-80336740 Msa0998870:CDS
ACCGTGTGGCGCACCTATTG+TGG 0.593859 6_4:-80336837 Msa0998870:CDS
GTATGGTCCATGGACTCCCC+GGG 0.595665 6_4:+80336409 None:intergenic
GTGTAGTGAAGTTCGCCGGT+CGG 0.597964 6_4:+80338535 None:intergenic
TGCACCATGTAACACTGGGT+GGG 0.599409 6_4:-80336648 Msa0998870:CDS
TTACCAACCGCAGTGGTCCG+TGG 0.600628 6_4:+80336484 None:intergenic
ATACTTCCTTTATCTCTGAG+TGG 0.602441 6_4:-80336390 Msa0998870:CDS
CACGCCACAGGGGTAGTGGT+GGG 0.603461 6_4:-80336706 Msa0998870:CDS
GGAGACGCCGTCTCAGCTTG+AGG 0.611463 6_4:-80336437 Msa0998870:CDS
GATCCTGCACCATGTAACAC+TGG 0.613273 6_4:-80336653 Msa0998870:CDS
ATCAATCAAAACAACAGACC+CGG 0.615476 6_4:+80336513 None:intergenic
CCATAGCCAGCCTTCGTCGG+AGG 0.616322 6_4:+80338465 None:intergenic
AAGGCGCTAAGATTGGTGCC+GGG 0.618996 6_4:-80336531 Msa0998870:CDS
TCAGCTTGAGGATGTGCCCG+GGG 0.621469 6_4:-80336425 Msa0998870:CDS
ATCCTGCACCATGTAACACT+GGG 0.622092 6_4:-80336652 Msa0998870:CDS
GGTTGTGTAGTGAAGTTCGC+CGG 0.624046 6_4:+80338531 None:intergenic
CCACCACTACCCCTGTGGCG+TGG 0.624777 6_4:+80336707 None:intergenic
AAGTGAGTGTGATAGTGATG+AGG 0.625574 6_4:+80338620 None:intergenic
ATATAATAGCCATCCATCCA+TGG 0.627250 6_4:-80338843 None:intergenic
GTGTGGCGCACCTATTGTGG+AGG 0.628062 6_4:-80336834 Msa0998870:CDS
ATTATTGCAGGCGCACCGTG+TGG 0.628755 6_4:-80336851 Msa0998870:intron
ATTATTATACTTAAATTACA+GGG 0.629842 6_4:+80336187 None:intergenic
GCATCCCAAGATTGGAGATG+GGG 0.630033 6_4:-80336602 Msa0998870:CDS
AACCCGGCGAGATTGGTTGG+TGG 0.633827 6_4:-80336463 Msa0998870:CDS
TTTCTTGTGATGTTTCAAGA+GGG 0.635093 6_4:-80335885 Msa0998870:three_prime_UTR
TCACTACACAACCCCACCAA+AGG 0.636171 6_4:-80338521 Msa0998870:CDS
TCCACAATAGGTGCGCCACA+CGG 0.638193 6_4:+80336836 None:intergenic
TTCGTCGGAGGCACCAACGA+CGG 0.648676 6_4:+80338477 None:intergenic
TCATCAGAGCTATCTTGCAG+GGG 0.648830 6_4:-80335945 Msa0998870:three_prime_UTR
CTCACCCACCACTACCCCTG+TGG 0.654422 6_4:+80336702 None:intergenic
AACACTGGGTGGGACTGGAA+AGG 0.656173 6_4:-80336638 Msa0998870:CDS
GTCGGAGGCACCAACGACGG+CGG 0.657793 6_4:+80338480 None:intergenic
CTGGTTCCGATTCCGCGTCG+CGG 0.660178 6_4:+80338419 None:intergenic
CTGCACCATGTAACACTGGG+TGG 0.667916 6_4:-80336649 Msa0998870:CDS
TGGATATTCACCCGGCAGCG+AGG 0.671097 6_4:-80336753 Msa0998870:CDS
ATAACATGACATCATAATCG+TGG 0.672350 6_4:-80336002 Msa0998870:three_prime_UTR
CTACACAACCCCACCAAAGG+CGG 0.680128 6_4:-80338518 Msa0998870:CDS
ATTCGCGGTGGATATTCACC+CGG 0.681804 6_4:-80336761 Msa0998870:CDS
ACAGCAGCAGAACTTAGCGA+CGG 0.696865 6_4:+80338250 None:intergenic
TAACTGTACTGCATTATGAG+TGG 0.699951 6_4:-80336123 Msa0998870:three_prime_UTR
CCAACCGCAGTGGTCCGTGG+CGG 0.720060 6_4:+80336487 None:intergenic
TTTGTTTGACCACGCCACAG+GGG 0.787151 6_4:-80336716 Msa0998870:CDS
TGTGCCGCCACGGACCACTG+CGG 0.789172 6_4:-80336491 Msa0998870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATTTTGAAAGTAATTA+AGG - chr6_4:80336610-80336629 Msa0998870:CDS 10.0%
!!! TATATTTTGAAAGTAATTAA+GGG - chr6_4:80336611-80336630 Msa0998870:CDS 10.0%
!! ATTATTATACTTAAATTACA+GGG + chr6_4:80338468-80338487 None:intergenic 10.0%
!! TATTATTATACTTAAATTAC+AGG + chr6_4:80338469-80338488 None:intergenic 10.0%
!! GTAATTTAAGTATAATAATA+AGG - chr6_4:80338469-80338488 Msa0998870:CDS 10.0%
!!! GTTAAAAAAGAAAAGAATTT+TGG + chr6_4:80335842-80335861 None:intergenic 15.0%
!! CTGAACTATTAAAAAAAATA+GGG + chr6_4:80337441-80337460 None:intergenic 15.0%
!! TCTGAACTATTAAAAAAAAT+AGG + chr6_4:80337442-80337461 None:intergenic 15.0%
!! AAAACCAAATTGAAAAATTA+GGG + chr6_4:80337656-80337675 None:intergenic 15.0%
!! AAAAACCAAATTGAAAAATT+AGG + chr6_4:80337657-80337676 None:intergenic 15.0%
!! TTATATCATTTAAATTTCCA+AGG - chr6_4:80338290-80338309 Msa0998870:CDS 15.0%
!! AAAAGAAAAGTTATATGGAA+TGG + chr6_4:80335922-80335941 None:intergenic 20.0%
!!! GTTTTTATAAATGCTATAAG+CGG - chr6_4:80337131-80337150 Msa0998870:intron 20.0%
!! AATCCTAATTCTTAAATTTC+AGG - chr6_4:80337532-80337551 Msa0998870:intron 20.0%
!! ATCCTAATTCTTAAATTTCA+GGG - chr6_4:80337533-80337552 Msa0998870:intron 20.0%
!!! AAAACCCTAATTTTTCAATT+TGG - chr6_4:80337649-80337668 Msa0998870:intron 20.0%
!!! AAACTCTAATTTTCAATTTC+AGG - chr6_4:80337692-80337711 Msa0998870:intron 20.0%
!!! AACTCTAATTTTCAATTTCA+GGG - chr6_4:80337693-80337712 Msa0998870:intron 20.0%
!!! ATGTTTTGGTTTGAGAATTT+TGG + chr6_4:80335893-80335912 None:intergenic 25.0%
! AAAGTTATATGGAATGGTAT+AGG + chr6_4:80335916-80335935 None:intergenic 25.0%
! TGTGGAAAAGAAAAGTTATA+TGG + chr6_4:80335927-80335946 None:intergenic 25.0%
! ATGAAATTTGCAACATTTGT+GGG + chr6_4:80335975-80335994 None:intergenic 25.0%
! AAAGTTGAATAATTAGGGTT+TGG + chr6_4:80336561-80336580 None:intergenic 25.0%
! AAACCCTAATTATTCAACTT+TGG - chr6_4:80336560-80336579 Msa0998870:CDS 25.0%
! AACCCTAATTATTCAACTTT+GGG - chr6_4:80336561-80336580 Msa0998870:CDS 25.0%
! TAATTAAGGGACTAATTTGA+TGG - chr6_4:80336624-80336643 Msa0998870:CDS 25.0%
! AAAGAATAACACAATCTAAG+CGG + chr6_4:80336691-80336710 None:intergenic 25.0%
! TATTATTCATAAGCTTATCG+AGG + chr6_4:80336828-80336847 None:intergenic 25.0%
! TAAAAATAAGCCAATCCAAA+TGG - chr6_4:80336890-80336909 Msa0998870:intron 25.0%
! AAAAATAAGCCAATCCAAAT+GGG - chr6_4:80336891-80336910 Msa0998870:intron 25.0%
! ACATAATTGCATATCATGAT+AGG + chr6_4:80337061-80337080 None:intergenic 25.0%
!! TTTATCATTTGCTACAGAAA+TGG + chr6_4:80337099-80337118 None:intergenic 25.0%
! TTAAAAAAAATAGGGCTGTT+TGG + chr6_4:80337433-80337452 None:intergenic 25.0%
! TAGTTTAGAGACTAAATTGA+AGG - chr6_4:80337484-80337503 Msa0998870:intron 25.0%
! AACCCTGAAATTTAAGAATT+AGG + chr6_4:80337538-80337557 None:intergenic 25.0%
! AATCCTGATTCTTCAAATTT+AGG - chr6_4:80337571-80337590 Msa0998870:intron 25.0%
! ATCCTGATTCTTCAAATTTA+GGG - chr6_4:80337572-80337591 Msa0998870:intron 25.0%
! AACCTGAAATTTATGAATCA+GGG + chr6_4:80337617-80337636 None:intergenic 25.0%
! AAACCTGAAATTTATGAATC+AGG + chr6_4:80337618-80337637 None:intergenic 25.0%
!! ACTCTAATTTTCAATTTCAG+GGG - chr6_4:80337694-80337713 Msa0998870:intron 25.0%
! TTAAAAAAAACCACACAAGT+TGG + chr6_4:80337755-80337774 None:intergenic 25.0%
!!! ACTTGTGTGGTTTTTTTTAA+TGG - chr6_4:80337755-80337774 Msa0998870:intron 25.0%
! AATCTTAATATTACCCAGAA+TGG + chr6_4:80338097-80338116 None:intergenic 25.0%
! ATTCTGGGTAATATTAAGAT+TGG - chr6_4:80338096-80338115 Msa0998870:intron 25.0%
! TTCTGGGTAATATTAAGATT+GGG - chr6_4:80338097-80338116 Msa0998870:intron 25.0%
!!! GAACCAAATTTTTGTTTTGA+TGG - chr6_4:80338360-80338379 Msa0998870:CDS 25.0%
! AGACCATCAAAACAAAAATT+TGG + chr6_4:80338366-80338385 None:intergenic 25.0%
!!! GTTTTGTTGATTATGTTACT+AGG - chr6_4:80338603-80338622 Msa0998870:CDS 25.0%
! GTTTGAGAATTTTGGATGTA+TGG + chr6_4:80335885-80335904 None:intergenic 30.0%
! TTATGTGTGTGCTATTATTG+TGG + chr6_4:80335945-80335964 None:intergenic 30.0%
CATGAAATTTGCAACATTTG+TGG + chr6_4:80335976-80335995 None:intergenic 30.0%
ATAGTGATGAGGTTCTTATA+TGG + chr6_4:80336024-80336043 None:intergenic 30.0%
TCACTGTTTGCTTAATTACA+AGG - chr6_4:80336476-80336495 Msa0998870:CDS 30.0%
CACTGTTTGCTTAATTACAA+GGG - chr6_4:80336477-80336496 Msa0998870:CDS 30.0%
ACCCTAATTATTCAACTTTG+GGG - chr6_4:80336562-80336581 Msa0998870:CDS 30.0%
AAGAATAACACAATCTAAGC+GGG + chr6_4:80336690-80336709 None:intergenic 30.0%
ATAGCTTATACAAAGCAGTT+TGG + chr6_4:80336990-80337009 None:intergenic 30.0%
!! AGCTATAAGCTGTTTTCATA+TGG - chr6_4:80337004-80337023 Msa0998870:intron 30.0%
! CTTATGTACATAAGCTTTGT+TGG + chr6_4:80337320-80337339 None:intergenic 30.0%
GCATATTTGAGCTTATCAAT+TGG + chr6_4:80337406-80337425 None:intergenic 30.0%
AATAGTTCAGAGACTAGATA+TGG - chr6_4:80337451-80337470 Msa0998870:intron 30.0%
ATAGTTCAGAGACTAGATAT+GGG - chr6_4:80337452-80337471 Msa0998870:intron 30.0%
AGACTAAATTGAAGGTTTGT+TGG - chr6_4:80337492-80337511 Msa0998870:intron 30.0%
AACCCTAAATTTGAAGAATC+AGG + chr6_4:80337577-80337596 None:intergenic 30.0%
AACCCTGATTCATAAATTTC+AGG - chr6_4:80337612-80337631 Msa0998870:intron 30.0%
! CAAGTTGGAATTGAAGAATA+AGG + chr6_4:80337740-80337759 None:intergenic 30.0%
TCTGGGTAATATTAAGATTG+GGG - chr6_4:80338098-80338117 Msa0998870:intron 30.0%
! TGATTTCAAGAATTTTGCCT+TGG + chr6_4:80338310-80338329 None:intergenic 30.0%
TGAAATCAAACACTTGATGT+TGG - chr6_4:80338322-80338341 Msa0998870:CDS 30.0%
ATTGAGCGATGTATTAAAAC+AGG - chr6_4:80338562-80338581 Msa0998870:CDS 30.0%
TTGATTATGTTACTAGGACT+TGG - chr6_4:80338609-80338628 Msa0998870:CDS 30.0%
ATAACATGACATCATAATCG+TGG - chr6_4:80338650-80338669 Msa0998870:CDS 30.0%
TTTCTTGTGATGTTTCAAGA+GGG - chr6_4:80338767-80338786 Msa0998870:five_prime_UTR 30.0%
! AGAATTTTGGATAGTGTCCA+TGG + chr6_4:80335829-80335848 None:intergenic 35.0%
! TGGAATGGTATAGGATGTTT+TGG + chr6_4:80335907-80335926 None:intergenic 35.0%
!! TCGCAAAAGCGTTAAGAAAA+AGG + chr6_4:80336377-80336396 None:intergenic 35.0%
CCCCCAAAGTTGAATAATTA+GGG + chr6_4:80336566-80336585 None:intergenic 35.0%
CCCTAATTATTCAACTTTGG+GGG - chr6_4:80336563-80336582 Msa0998870:CDS 35.0%
ACCCCCAAAGTTGAATAATT+AGG + chr6_4:80336567-80336586 None:intergenic 35.0%
GAACAGAATATGACACTGTT+TGG - chr6_4:80336652-80336671 Msa0998870:CDS 35.0%
AGAATATGACACTGTTTGGT+TGG - chr6_4:80336656-80336675 Msa0998870:CDS 35.0%
ACACTGTTTGGTTGGATAAA+GGG - chr6_4:80336664-80336683 Msa0998870:CDS 35.0%
AGCTGCAAAATAAGCTCTTT+GGG + chr6_4:80336917-80336936 None:intergenic 35.0%
AAGCTGCAAAATAAGCTCTT+TGG + chr6_4:80336918-80336937 None:intergenic 35.0%
!!! GAGCTTATTTTGCAGCTTAT+AGG - chr6_4:80336920-80336939 Msa0998870:intron 35.0%
!! CTATAAGCTGTTTTCCAAAC+AGG + chr6_4:80337030-80337049 None:intergenic 35.0%
CTACAGAAATGGCTTATGTA+AGG + chr6_4:80337088-80337107 None:intergenic 35.0%
GCATAAGTTGTGAAACTGTT+TGG + chr6_4:80337250-80337269 None:intergenic 35.0%
TCAAATGAGTCTATCCAAAC+AGG - chr6_4:80337282-80337301 Msa0998870:intron 35.0%
TTCTTCAATTCCAACTTGTG+TGG - chr6_4:80337742-80337761 Msa0998870:intron 35.0%
ACTGTACTTGTGATTATTGC+AGG - chr6_4:80337789-80337808 Msa0998870:intron 35.0%
GGTAATATTAAGATTGGGGA+AGG - chr6_4:80338102-80338121 Msa0998870:intron 35.0%
ATCAATCAAAACAACAGACC+CGG + chr6_4:80338142-80338161 None:intergenic 35.0%
ACTCAGAGATAAAGGAAGTA+TGG + chr6_4:80338263-80338282 None:intergenic 35.0%
ATACTTCCTTTATCTCTGAG+TGG - chr6_4:80338262-80338281 Msa0998870:CDS 35.0%
TAACTGTACTGCATTATGAG+TGG - chr6_4:80338529-80338548 Msa0998870:CDS 35.0%
GCGATGTATTAAAACAGGTT+CGG - chr6_4:80338567-80338586 Msa0998870:CDS 35.0%
CTTTCTTGTGATGTTTCAAG+AGG - chr6_4:80338766-80338785 Msa0998870:five_prime_UTR 35.0%
AAGAGGGATAGATGAGTTTA+AGG - chr6_4:80338783-80338802 Msa0998870:five_prime_UTR 35.0%
! TGAGTTTAAGGTTCTGTCTA+TGG - chr6_4:80338795-80338814 Msa0998870:five_prime_UTR 35.0%
! TTTTGGATAGTGTCCATGGA+TGG + chr6_4:80335825-80335844 None:intergenic 40.0%
! AAGTGAGTGTGATAGTGATG+AGG + chr6_4:80336035-80336054 None:intergenic 40.0%
CGTTCACTTTCGTTTCATCT+TGG - chr6_4:80336306-80336325 Msa0998870:three_prime_UTR 40.0%
TGAGAGTAAGAGATACAAGC+AGG + chr6_4:80336459-80336478 None:intergenic 40.0%
GACACTGTTTGGTTGGATAA+AGG - chr6_4:80336663-80336682 Msa0998870:CDS 40.0%
! CTGTTTTCATATGGCCTGTT+TGG - chr6_4:80337013-80337032 Msa0998870:intron 40.0%
! GCGGTTTTCATAAGCTATCT+TGG - chr6_4:80337150-80337169 Msa0998870:intron 40.0%
ACTCATTTGAGCTTGTCAAC+TGG + chr6_4:80337272-80337291 None:intergenic 40.0%
AAAAATAGGGCTGTTTGGCT+TGG + chr6_4:80337428-80337447 None:intergenic 40.0%
GAATGTAGTGCTAGTGCTAA+CGG + chr6_4:80337856-80337875 None:intergenic 40.0%
! GATAAAGGAAGTATGGTCCA+TGG + chr6_4:80338256-80338275 None:intergenic 40.0%
ATCAGACCACTCAGAGATAA+AGG + chr6_4:80338271-80338290 None:intergenic 40.0%
CACTTGATGTTGGATTTGCA+CGG - chr6_4:80338332-80338351 Msa0998870:CDS 40.0%
TATCATCAGAGCTATCTTGC+AGG - chr6_4:80338705-80338724 Msa0998870:five_prime_UTR 40.0%
ATCATCAGAGCTATCTTGCA+GGG - chr6_4:80338706-80338725 Msa0998870:five_prime_UTR 40.0%
TTCTGTCTATGGTGAGAGAT+CGG - chr6_4:80338806-80338825 Msa0998870:five_prime_UTR 40.0%
GGTGAGAAATTGGAATGGTG+GGG + chr6_4:80336063-80336082 None:intergenic 45.0%
GGGTGAGAAATTGGAATGGT+GGG + chr6_4:80336064-80336083 None:intergenic 45.0%
TTGTTGTGGGGGTGAGAAAT+TGG + chr6_4:80336073-80336092 None:intergenic 45.0%
!! ATTGTGGTGGTTTGTTGTGG+GGG + chr6_4:80336084-80336103 None:intergenic 45.0%
!! GATTGTGGTGGTTTGTTGTG+GGG + chr6_4:80336085-80336104 None:intergenic 45.0%
!! GGATTGTGGTGGTTTGTTGT+GGG + chr6_4:80336086-80336105 None:intergenic 45.0%
!! TGAGTAGAGGTAGCTTGCTA+GGG + chr6_4:80336259-80336278 None:intergenic 45.0%
!! TTGAGTAGAGGTAGCTTGCT+AGG + chr6_4:80336260-80336279 None:intergenic 45.0%
GAGAGAGAATCGTTGAGTAG+AGG + chr6_4:80336272-80336291 None:intergenic 45.0%
CAAGGGATTTCTTGCTTGTC+AGG - chr6_4:80336494-80336513 Msa0998870:CDS 45.0%
ATAAGCTCTTTGGGCCCATT+TGG + chr6_4:80336908-80336927 None:intergenic 45.0%
GGATAGTTTACGAGCCTGTT+TGG + chr6_4:80337299-80337318 None:intergenic 45.0%
!! TTTTGTTTGACCACGCCACA+GGG - chr6_4:80337935-80337954 Msa0998870:intron 45.0%
ATCCTGCACCATGTAACACT+GGG - chr6_4:80338000-80338019 Msa0998870:intron 45.0%
!! TTTTGATTGATGTGCCGCCA+CGG - chr6_4:80338151-80338170 Msa0998870:intron 45.0%
CAGGTTCGGAATACAGAAAC+TGG - chr6_4:80338581-80338600 Msa0998870:CDS 45.0%
TCATCAGAGCTATCTTGCAG+GGG - chr6_4:80338707-80338726 Msa0998870:five_prime_UTR 45.0%
GGATAGTGTCCATGGATGGA+TGG + chr6_4:80335821-80335840 None:intergenic 50.0%
GGGGTGAGAAATTGGAATGG+TGG + chr6_4:80336065-80336084 None:intergenic 50.0%
GTGGGGGTGAGAAATTGGAA+TGG + chr6_4:80336068-80336087 None:intergenic 50.0%
!! CGGATTGTGGTGGTTTGTTG+TGG + chr6_4:80336087-80336106 None:intergenic 50.0%
GGTTGTGTAGTGAAGTTCGC+CGG + chr6_4:80336124-80336143 None:intergenic 50.0%
TCACTACACAACCCCACCAA+AGG - chr6_4:80336131-80336150 Msa0998870:three_prime_UTR 50.0%
ACAGCAGCAGAACTTAGCGA+CGG + chr6_4:80336405-80336424 None:intergenic 50.0%
CTCTTTGGGCCCATTTGGAT+TGG + chr6_4:80336903-80336922 None:intergenic 50.0%
ATTCGCGGTGGATATTCACC+CGG - chr6_4:80337891-80337910 Msa0998870:intron 50.0%
!!! GTTTTGTTTGACCACGCCAC+AGG - chr6_4:80337934-80337953 Msa0998870:intron 50.0%
TTTGTTTGACCACGCCACAG+GGG - chr6_4:80337936-80337955 Msa0998870:intron 50.0%
GATCCTGCACCATGTAACAC+TGG - chr6_4:80337999-80338018 Msa0998870:intron 50.0%
TGCACCATGTAACACTGGGT+GGG - chr6_4:80338004-80338023 Msa0998870:intron 50.0%
GGCATCCCAAGATTGGAGAT+GGG - chr6_4:80338049-80338068 Msa0998870:intron 50.0%
GCATCCCAAGATTGGAGATG+GGG - chr6_4:80338050-80338069 Msa0998870:intron 50.0%
AGCACCCCATCTCCAATCTT+GGG + chr6_4:80338057-80338076 None:intergenic 50.0%
! ATTGGAGATGGGGTGCTCAT+TGG - chr6_4:80338060-80338079 Msa0998870:intron 50.0%
!! ATTGGGGAAGGCGCTAAGAT+TGG - chr6_4:80338114-80338133 Msa0998870:intron 50.0%
TTACCACCAACCAATCTCGC+CGG + chr6_4:80338195-80338214 None:intergenic 50.0%
!! CATTGATCGGCGGATTGTGG+TGG + chr6_4:80336097-80336116 None:intergenic 55.0%
GTGTAGTGAAGTTCGCCGGT+CGG + chr6_4:80336120-80336139 None:intergenic 55.0%
CTACACAACCCCACCAAAGG+CGG - chr6_4:80336134-80336153 Msa0998870:three_prime_UTR 55.0%
!! TTGTTGGTGGTTGCCGCCTT+TGG + chr6_4:80336150-80336169 None:intergenic 55.0%
TGACCATAGCCAGCCTTCGT+CGG + chr6_4:80336193-80336212 None:intergenic 55.0%
!! TAGAGGTAGCTTGCTAGGGC+TGG + chr6_4:80336255-80336274 None:intergenic 55.0%
ATTATTGCAGGCGCACCGTG+TGG - chr6_4:80337801-80337820 Msa0998870:intron 55.0%
TCCACAATAGGTGCGCCACA+CGG + chr6_4:80337819-80337838 None:intergenic 55.0%
TCGCGTCGCTGATGTATTCG+CGG - chr6_4:80337876-80337895 Msa0998870:intron 55.0%
CACCCAGTGTTACATGGTGC+AGG + chr6_4:80338005-80338024 None:intergenic 55.0%
CTGCACCATGTAACACTGGG+TGG - chr6_4:80338003-80338022 Msa0998870:intron 55.0%
CAGTCCCACCCAGTGTTACA+TGG + chr6_4:80338011-80338030 None:intergenic 55.0%
CATGTAACACTGGGTGGGAC+TGG - chr6_4:80338009-80338028 Msa0998870:intron 55.0%
AACACTGGGTGGGACTGGAA+AGG - chr6_4:80338014-80338033 Msa0998870:intron 55.0%
! GTGGGACTGGAAAGGTTGGT+GGG - chr6_4:80338022-80338041 Msa0998870:intron 55.0%
!! TGGGACTGGAAAGGTTGGTG+GGG - chr6_4:80338023-80338042 Msa0998870:intron 55.0%
!! CTGGAAAGGTTGGTGGGGAT+CGG - chr6_4:80338028-80338047 Msa0998870:intron 55.0%
CGGCATCCCAAGATTGGAGA+TGG - chr6_4:80338048-80338067 Msa0998870:intron 55.0%
GAGCACCCCATCTCCAATCT+TGG + chr6_4:80338058-80338077 None:intergenic 55.0%
! AGATGGGGTGCTCATTGGTG+CGG - chr6_4:80338065-80338084 Msa0998870:intron 55.0%
!! GAAGGCGCTAAGATTGGTGC+CGG - chr6_4:80338120-80338139 Msa0998870:intron 55.0%
! AAGGCGCTAAGATTGGTGCC+GGG - chr6_4:80338121-80338140 Msa0998870:intron 55.0%
TACCACCAACCAATCTCGCC+GGG + chr6_4:80338194-80338213 None:intergenic 55.0%
!! GGCGAGATTGGTTGGTGGTA+AGG - chr6_4:80338194-80338213 Msa0998870:CDS 55.0%
GGCACATCCTCAAGCTGAGA+CGG + chr6_4:80338225-80338244 None:intergenic 55.0%
TCTCAGCTTGAGGATGTGCC+CGG - chr6_4:80338225-80338244 Msa0998870:CDS 55.0%
AGTATGGTCCATGGACTCCC+CGG + chr6_4:80338247-80338266 None:intergenic 55.0%
!! CGGCATTGATCGGCGGATTG+TGG + chr6_4:80336100-80336119 None:intergenic 60.0%
ATCCGCCGATCAATGCCGAC+CGG - chr6_4:80336102-80336121 Msa0998870:three_prime_UTR 60.0%
!! GTTCGCCGGTCGGCATTGAT+CGG + chr6_4:80336110-80336129 None:intergenic 60.0%
TGGTGGTTGCCGCCTTTGGT+GGG + chr6_4:80336146-80336165 None:intergenic 60.0%
! TTGGTGGTTGCCGCCTTTGG+TGG + chr6_4:80336147-80336166 None:intergenic 60.0%
AACGACGGCGGAGTTGTTGG+TGG + chr6_4:80336163-80336182 None:intergenic 60.0%
ACCAACAACTCCGCCGTCGT+TGG - chr6_4:80336162-80336181 Msa0998870:three_prime_UTR 60.0%
ACCAACGACGGCGGAGTTGT+TGG + chr6_4:80336166-80336185 None:intergenic 60.0%
!! TTCGTCGGAGGCACCAACGA+CGG + chr6_4:80336178-80336197 None:intergenic 60.0%
ACCGTGTGGCGCACCTATTG+TGG - chr6_4:80337815-80337834 Msa0998870:intron 60.0%
GTGTGGCGCACCTATTGTGG+AGG - chr6_4:80337818-80337837 Msa0998870:intron 60.0%
GTCGAGCCTGCCTCCACAAT+AGG + chr6_4:80337831-80337850 None:intergenic 60.0%
CGTCGCTGATGTATTCGCGG+TGG - chr6_4:80337879-80337898 Msa0998870:intron 60.0%
TGGATATTCACCCGGCAGCG+AGG - chr6_4:80337899-80337918 Msa0998870:intron 60.0%
ATTCACCCGGCAGCGAGGAT+TGG - chr6_4:80337904-80337923 Msa0998870:intron 60.0%
CTTTGCCAATCCTCGCTGCC+GGG + chr6_4:80337912-80337931 None:intergenic 60.0%
CCTTTGCCAATCCTCGCTGC+CGG + chr6_4:80337913-80337932 None:intergenic 60.0%
! CGGCAGCGAGGATTGGCAAA+GGG - chr6_4:80337911-80337930 Msa0998870:intron 60.0%
! GGCAGCGAGGATTGGCAAAG+GGG - chr6_4:80337912-80337931 Msa0998870:intron 60.0%
!! AGGGGTAGTGGTGGGTGAGA+CGG - chr6_4:80337954-80337973 Msa0998870:intron 60.0%
CTGGGTGGGACTGGAAAGGT+TGG - chr6_4:80338018-80338037 Msa0998870:intron 60.0%
GGTGGGACTGGAAAGGTTGG+TGG - chr6_4:80338021-80338040 Msa0998870:intron 60.0%
GGGGATCGGCATCCCAAGAT+TGG - chr6_4:80338042-80338061 Msa0998870:intron 60.0%
! GATGGGGTGCTCATTGGTGC+GGG - chr6_4:80338066-80338085 Msa0998870:intron 60.0%
! TGGTGCGGGTGCTACCATTC+TGG - chr6_4:80338080-80338099 Msa0998870:intron 60.0%
! GGTGCGGGTGCTACCATTCT+GGG - chr6_4:80338081-80338100 Msa0998870:intron 60.0%
TTACCAACCGCAGTGGTCCG+TGG + chr6_4:80338171-80338190 None:intergenic 60.0%
!! GACCACTGCGGTTGGTAACC+CGG - chr6_4:80338173-80338192 Msa0998870:CDS 60.0%
!! GGTTGGTAACCCGGCGAGAT+TGG - chr6_4:80338182-80338201 Msa0998870:CDS 60.0%
GGTAACCCGGCGAGATTGGT+TGG - chr6_4:80338186-80338205 Msa0998870:CDS 60.0%
! AACCCGGCGAGATTGGTTGG+TGG - chr6_4:80338189-80338208 Msa0998870:CDS 60.0%
CTCAGCTTGAGGATGTGCCC+GGG - chr6_4:80338226-80338245 Msa0998870:CDS 60.0%
TCAGCTTGAGGATGTGCCCG+GGG - chr6_4:80338227-80338246 Msa0998870:CDS 60.0%
GTATGGTCCATGGACTCCCC+GGG + chr6_4:80338246-80338265 None:intergenic 60.0%
GGTGGTTGCCGCCTTTGGTG+GGG + chr6_4:80336145-80336164 None:intergenic 65.0%
! GTCGTTGGTGCCTCCGACGA+AGG - chr6_4:80336177-80336196 Msa0998870:three_prime_UTR 65.0%
! TTGGTGCCTCCGACGAAGGC+TGG - chr6_4:80336181-80336200 Msa0998870:three_prime_UTR 65.0%
CCATAGCCAGCCTTCGTCGG+AGG + chr6_4:80336190-80336209 None:intergenic 65.0%
! CCTCCGACGAAGGCTGGCTA+TGG - chr6_4:80336187-80336206 Msa0998870:three_prime_UTR 65.0%
CTGGTTCCGATTCCGCGTCG+CGG + chr6_4:80336236-80336255 None:intergenic 65.0%
GGCGCACCTATTGTGGAGGC+AGG - chr6_4:80337822-80337841 Msa0998870:intron 65.0%
! CCGGCAGCGAGGATTGGCAA+AGG - chr6_4:80337910-80337929 Msa0998870:intron 65.0%
TGACCACGCCACAGGGGTAG+TGG - chr6_4:80337942-80337961 Msa0998870:intron 65.0%
! CACGCCACAGGGGTAGTGGT+GGG - chr6_4:80337946-80337965 Msa0998870:intron 65.0%
CTCACCCACCACTACCCCTG+TGG + chr6_4:80337953-80337972 None:intergenic 65.0%
!! GGTAGTGGTGGGTGAGACGG+CGG - chr6_4:80337957-80337976 Msa0998870:intron 65.0%
GTGGGTGAGACGGCGGTGAT+TGG - chr6_4:80337964-80337983 Msa0998870:intron 65.0%
GGAGACGCCGTCTCAGCTTG+AGG - chr6_4:80338215-80338234 Msa0998870:CDS 65.0%
!! CGCCGGTCGGCATTGATCGG+CGG + chr6_4:80336107-80336126 None:intergenic 70.0%
!! GTCGGAGGCACCAACGACGG+CGG + chr6_4:80336175-80336194 None:intergenic 70.0%
TTCCGCGTCGCGGCGTGCTT+CGG + chr6_4:80336226-80336245 None:intergenic 70.0%
AGCACGCCGCGACGCGGAAT+CGG - chr6_4:80336227-80336246 Msa0998870:three_prime_UTR 70.0%
CCACCACTACCCCTGTGGCG+TGG + chr6_4:80337948-80337967 None:intergenic 70.0%
! CCACGCCACAGGGGTAGTGG+TGG - chr6_4:80337945-80337964 Msa0998870:intron 70.0%
TGTGCCGCCACGGACCACTG+CGG - chr6_4:80338161-80338180 Msa0998870:CDS 70.0%
CCAACCGCAGTGGTCCGTGG+CGG + chr6_4:80338168-80338187 None:intergenic 70.0%
CGCCGGGTTACCAACCGCAG+TGG + chr6_4:80338178-80338197 None:intergenic 70.0%
GGATGTGCCCGGGGAGTCCA+TGG - chr6_4:80338236-80338255 Msa0998870:CDS 70.0%
AGCCGAAGCACGCCGCGACG+CGG - chr6_4:80336221-80336240 Msa0998870:three_prime_UTR 75.0%
CCGCCACGGACCACTGCGGT+TGG - chr6_4:80338165-80338184 Msa0998870:CDS 75.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 80335815 80338859 80335815 ID=Msa0998870;Name=Msa0998870
chr6_4 mRNA 80335815 80338859 80335815 ID=Msa0998870-mRNA-1;Parent=Msa0998870;Name=Msa0998870-mRNA-1;_AED=0.01;_eAED=0.01;_QI=164|1|1|1|1|1|2|557|342
chr6_4 exon 80335815 80336863 80335815 ID=Msa0998870-mRNA-1:exon:15226;Parent=Msa0998870-mRNA-1
chr6_4 exon 80338159 80338859 80338159 ID=Msa0998870-mRNA-1:exon:15225;Parent=Msa0998870-mRNA-1
chr6_4 five_prime_UTR 80338696 80338859 80338696 ID=Msa0998870-mRNA-1:five_prime_utr;Parent=Msa0998870-mRNA-1
chr6_4 CDS 80338159 80338695 80338159 ID=Msa0998870-mRNA-1:cds;Parent=Msa0998870-mRNA-1
chr6_4 CDS 80336372 80336863 80336372 ID=Msa0998870-mRNA-1:cds;Parent=Msa0998870-mRNA-1
chr6_4 three_prime_UTR 80335815 80336371 80335815 ID=Msa0998870-mRNA-1:three_prime_utr;Parent=Msa0998870-mRNA-1
Gene Sequence

>Msa0998870

ATGTTGCAAATTTCATGCAATTATTTACATGCAAAATTCAAACCATATAAGAACCTCATCACTATCACACTCACTTTCTCACCCCACCATTCCAATTTCTCACCCCCACAACAAACCACCACAATCCGCCGATCAATGCCGACCGGCGAACTTCACTACACAACCCCACCAAAGGCGGCAACCACCAACAACTCCGCCGTCGTTGGTGCCTCCGACGAAGGCTGGCTATGGTCACAAATCAAAGCCGAAGCACGCCGCGACGCGGAATCGGAACCAGCCCTAGCAAGCTACCTCTACTCAACGATTCTCTCTCACTCTTCACTCGAACGTTCACTTTCGTTTCATCTTGGTAACAAGCTTTGTTCTTCGACGCTTCTTTCGACGCTTCTTTATGACCTTTTTCTTAACGCTTTTGCGACTGATCCGTCGCTAAGTTCTGCTGCTGTTGCTGATCTTCGTGCTGCTCGTGAACGTGATCCTGCTTGTATCTCTTACTCTCACTGTTTGCTTAATTACAAGGGATTTCTTGCTTGTCAGGCGCACCGTGTGGCGCACCTATTGTGGAGGCAGGCTCGACAGCCGTTAGCACTAGCACTACATTCTCGCGTCGCTGATGTATTCGCGGTGGATATTCACCCGGCAGCGAGGATTGGCAAAGGGGTTTTGTTTGACCACGCCACAGGGGTAGTGGTGGGTGAGACGGCGGTGATTGGAAATAATGTGTCGATCCTGCACCATGTAACACTGGGTGGGACTGGAAAGGTTGGTGGGGATCGGCATCCCAAGATTGGAGATGGGGTGCTCATTGGTGCGGGTGCTACCATTCTGGGTAATATTAAGATTGGGGAAGGCGCTAAGATTGGTGCCGGGTCTGTTGTTTTGATTGATGTGCCGCCACGGACCACTGCGGTTGGTAACCCGGCGAGATTGGTTGGTGGTAAGGAGACGCCGTCTCAGCTTGAGGATGTGCCCGGGGAGTCCATGGACCATACTTCCTTTATCTCTGAGTGGTCTGATTATATCATTTAA
Protein sequence

>Msa0998870

MLQISCNYLHAKFKPYKNLITITLTFSPHHSNFSPPQQTTTIRRSMPTGELHYTTPPKAATTNNSAVVGASDEGWLWSQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNAFATDPSLSSAAVADLRAARERDPACISYSHCLLNYKGFLACQAHRVAHLLWRQARQPLALALHSRVADVFAVDIHPAARIGKGVLFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKETPSQLEDVPGESMDHTSFISEWSDYII*