AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0603690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0603690 MtrunA17_Chr4g0032371 99.282 557 4 0 1 557 1 557 0.0 1083
Msa0603690 MtrunA17_Chr2g0279391 50.529 473 230 3 88 557 96 567 7.22e-157 460
Msa0603690 MtrunA17_Chr4g0042261 98.810 84 1 0 474 557 1 84 2.16e-49 165
Msa0603690 MtrunA17_Chr4g0042271 68.182 132 23 4 330 453 12 132 1.86e-44 154
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0603690 AT5G12860.1 81.509 530 93 3 33 557 28 557 0.0 841
Msa0603690 AT5G12860.2 81.474 529 93 3 33 556 28 556 0.0 838
Msa0603690 AT5G64290.1 51.163 473 227 3 88 557 92 563 7.42e-160 468
Msa0603690 AT5G64280.1 45.688 545 280 7 22 557 12 549 4.35e-144 427

Find 241 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTGTACTGAAATCTTTA+TGG 0.136643 4_2:-48358130 None:intergenic
GTCATTCCTCTCCAACCTTA+TGG 0.176770 4_2:+48357665 Msa0603690:CDS
TAGGGAGAAGTTGGAGAAAA+TGG 0.227943 4_2:+48355671 Msa0603690:CDS
ATGGGTGGCCTTACTCATTA+TGG 0.238267 4_2:+48357684 Msa0603690:CDS
CTTTCATGGCAACTATCTTT+TGG 0.241038 4_2:+48357507 Msa0603690:CDS
GCCGTAACTGCTGCCATTCT+TGG 0.244211 4_2:+48356631 Msa0603690:CDS
GGCTTGGACTCGGGTCTATT+TGG 0.247406 4_2:+48357805 Msa0603690:CDS
CTCGGCGCTGTCGCAATTCT+AGG 0.249369 4_2:+48355069 Msa0603690:CDS
TTTGTCCGTCGCTACTGCTC+TGG 0.283196 4_2:+48357611 Msa0603690:CDS
TCATTCCTCTCCAACCTTAT+GGG 0.283492 4_2:+48357666 Msa0603690:CDS
CTTGCCAAATGGTGGGGTTA+TGG 0.288623 4_2:+48357750 Msa0603690:CDS
GCGTTGCGGGATACGCCTTC+AGG 0.306705 4_2:-48354985 None:intergenic
AGGAACGGAGGCGGAGGAAG+GGG 0.307274 4_2:-48354699 None:intergenic
GTGGGGAGGAACGGAGGCGG+AGG 0.313528 4_2:-48354705 None:intergenic
TGCAACAAAGGGTAGGGTTT+TGG 0.314228 4_2:-48355112 None:intergenic
TGATGCTATGAGTGGTTTAA+TGG 0.314722 4_2:-48354926 None:intergenic
TGAAATGAGGGGTGAGAAAA+TGG 0.319823 4_2:-48354803 None:intergenic
GGGTTTGGTTTCGTTGGTTT+TGG 0.322223 4_2:+48355581 Msa0603690:CDS
GACGATTGGGTGGGTGGATT+GGG 0.322448 4_2:+48355539 Msa0603690:CDS
GGCCTTACTCATTATGGGAT+TGG 0.323259 4_2:+48357690 Msa0603690:CDS
GCCTTACTCATTATGGGATT+GGG 0.329338 4_2:+48357691 Msa0603690:CDS
AAACAAATCAACCATGGAAT+TGG 0.331446 4_2:-48355156 None:intergenic
TGGGTGGCCTTACTCATTAT+GGG 0.333123 4_2:+48357685 Msa0603690:CDS
ACACAGTTTGTTGGTGGATT+GGG 0.337833 4_2:+48357483 Msa0603690:intron
AGCGGCTATTGTGCCGGGTT+TGG 0.350388 4_2:+48355566 Msa0603690:CDS
GAGGTTAGTGGCGGTGGTTG+TGG 0.351291 4_2:-48354677 None:intergenic
TGAGTGTGGATCGTTGGATT+TGG 0.352107 4_2:-48354547 None:intergenic
AGACGATTGGGTGGGTGGAT+TGG 0.354209 4_2:+48355538 Msa0603690:CDS
TGGAATGGACGGTGGAGGTT+GGG 0.355641 4_2:-48354527 None:intergenic
GTAAACACATAACGTTATTC+AGG 0.357311 4_2:+48358072 Msa0603690:three_prime_UTR
TACACAGTTTGTTGGTGGAT+TGG 0.359432 4_2:+48357482 Msa0603690:intron
GCCAGTGGAGCTGCTCATAT+TGG 0.359630 4_2:+48357570 Msa0603690:CDS
TTGGTGGATTGGGTCTTTCA+TGG 0.359871 4_2:+48357493 Msa0603690:CDS
GCGGAGGAAGGGGAGGTTAG+TGG 0.362986 4_2:-48354689 None:intergenic
GCCATAGTGGTGGTGGTGAT+TGG 0.363664 4_2:-48354637 None:intergenic
GGTTGAGCTGGTGGCGGTGC+TGG 0.377075 4_2:-48354889 None:intergenic
CTCATAAATAATAATGTAAC+TGG 0.384382 4_2:-48358047 None:intergenic
GCCGGGTACTTGAACAAATA+TGG 0.386249 4_2:+48356757 Msa0603690:CDS
GAAGGGGAGGTTAGTGGCGG+TGG 0.387410 4_2:-48354683 None:intergenic
TTAGCTGTACTCCTCATCTC+AGG 0.388506 4_2:+48356655 Msa0603690:CDS
GGTAGTTCTTCGTTAGGGTT+AGG 0.393360 4_2:+48355255 Msa0603690:CDS
GGCTAAAGCGGCTATTGTGC+CGG 0.394326 4_2:+48355560 Msa0603690:CDS
GAGTAGTTGCCATGCGTTGC+GGG 0.399074 4_2:-48354998 None:intergenic
TCCAAGAATGGCAGCAGTTA+CGG 0.399210 4_2:-48356632 None:intergenic
CCCAATCACCACCACCACTA+TGG 0.400180 4_2:+48354636 Msa0603690:exon
CCTTCGGTTTCCGCGAGGGC+TGG 0.400631 4_2:+48355321 Msa0603690:CDS
GTTAGCTCCGGCGATTCCTT+CGG 0.405730 4_2:+48355305 Msa0603690:CDS
AAGTGTGTGTGAAATAATTA+AGG 0.407852 4_2:+48358177 Msa0603690:three_prime_UTR
TTGGAATGGACGGTGGAGGT+TGG 0.410765 4_2:-48354528 None:intergenic
GGAAATGTTGGCGGAGAGGT+GGG 0.411101 4_2:-48354723 None:intergenic
GTTAGGGTTAGGTTATAGTT+TGG 0.413689 4_2:+48355266 Msa0603690:CDS
TGGACGGTGGAGGTTGGGAT+TGG 0.415547 4_2:-48354522 None:intergenic
TTTGTTTGTTGGTGAGGAAT+TGG 0.416087 4_2:-48354489 None:intergenic
TGGAATTGGATCACCGAAAC+CGG 0.419814 4_2:-48355142 None:intergenic
AAGCCATTGGCTTGTGGTAA+AGG 0.420303 4_2:+48357832 Msa0603690:CDS
CTAGCAAGCTTAGGCGCATC+AGG 0.421036 4_2:-48355651 None:intergenic
CTGGGAACTCCACCATTCTT+CGG 0.421438 4_2:+48357630 Msa0603690:CDS
AGGGGTGAGAAAATGGAAAT+GGG 0.422804 4_2:-48354796 None:intergenic
CTGAGGAGAAGCTTGGATCT+TGG 0.422810 4_2:+48355409 Msa0603690:CDS
GTTGGTGAGGAATTGGTGGC+TGG 0.424673 4_2:-48354482 None:intergenic
GCTTAGCTGAGGGTGTTGCC+TGG 0.426980 4_2:+48356698 Msa0603690:CDS
ATTCGATTGGTCAGACGATT+GGG 0.427726 4_2:+48355526 Msa0603690:CDS
GAATATGCGGCTTTGTTTGT+TGG 0.431679 4_2:-48354500 None:intergenic
AGGGAGAAGTTGGAGAAAAT+GGG 0.431911 4_2:+48355672 Msa0603690:CDS
GTATTGTTAACATTGTCATC+TGG 0.433054 4_2:+48357784 Msa0603690:CDS
GCGCCTTGCCATGGTTGAGC+TGG 0.438550 4_2:-48354901 None:intergenic
GAGGAACGGAGGCGGAGGAA+GGG 0.438819 4_2:-48354700 None:intergenic
TTGTCATCTGGCTTGGACTC+GGG 0.439851 4_2:+48357796 Msa0603690:CDS
AATTCGATTGGTCAGACGAT+TGG 0.441905 4_2:+48355525 Msa0603690:CDS
ACTGTTATTACACAGTTTGT+TGG 0.442820 4_2:+48357474 Msa0603690:intron
AACGATCAGCAGCGGTATCC+AGG 0.443065 4_2:-48358008 None:intergenic
GTTAACATTGTCATCTGGCT+TGG 0.443988 4_2:+48357789 Msa0603690:CDS
TCGGTTTCCGCGAGGGCTGG+TGG 0.447113 4_2:+48355324 Msa0603690:CDS
CGGGATACGCCTTCAGGGGT+TGG 0.447455 4_2:-48354979 None:intergenic
TTGTCCGTCGCTACTGCTCT+GGG 0.447973 4_2:+48357612 Msa0603690:CDS
GAGTTATTAGAAATTTAGAA+TGG 0.448534 4_2:-48354586 None:intergenic
ACAAATATGGTCTCATCTCT+TGG 0.449006 4_2:+48356770 Msa0603690:CDS
GAGGTGGGGAGGAACGGAGG+CGG 0.449837 4_2:-48354708 None:intergenic
GACCGCTACTCTGTTTCTTA+CGG 0.449963 4_2:+48355722 Msa0603690:CDS
GCTGCCCTCATTGCAATGGC+CGG 0.451401 4_2:+48356739 Msa0603690:CDS
GAGGGGTGAGAAAATGGAAA+TGG 0.452189 4_2:-48354797 None:intergenic
ACCAATATGAGCAGCTCCAC+TGG 0.452807 4_2:-48357571 None:intergenic
ATTGTCATCTGGCTTGGACT+CGG 0.455077 4_2:+48357795 Msa0603690:CDS
GCTGTCGCAATTCTAGGTTT+AGG 0.456923 4_2:+48355075 Msa0603690:CDS
CTGATGCGCCTAAGCTTGCT+AGG 0.463708 4_2:+48355652 Msa0603690:CDS
GGAGGAACGGAGGCGGAGGA+AGG 0.464370 4_2:-48354701 None:intergenic
TGGAAATGTTGGCGGAGAGG+TGG 0.466701 4_2:-48354724 None:intergenic
GGGTGTGTGAATTGATTTGA+GGG 0.466782 4_2:-48354773 None:intergenic
GGAGAGGTGGGGAGGAACGG+AGG 0.467998 4_2:-48354711 None:intergenic
ACTCTTACTTTGAATTCGAT+TGG 0.469687 4_2:+48355513 Msa0603690:CDS
AACGGAGGCGGAGGAAGGGG+AGG 0.470390 4_2:-48354696 None:intergenic
CCATAGTGGTGGTGGTGATT+GGG 0.471355 4_2:-48354636 None:intergenic
GGCGGAGAGGTGGGGAGGAA+CGG 0.471488 4_2:-48354714 None:intergenic
GGGTGAGAAAATGGAAATGG+GGG 0.471881 4_2:-48354794 None:intergenic
CGTTGCGGGATACGCCTTCA+GGG 0.472773 4_2:-48354984 None:intergenic
CTGCCCTCATTGCAATGGCC+GGG 0.473064 4_2:+48356740 Msa0603690:CDS
AAAGCCATAACCCCACCATT+TGG 0.475376 4_2:-48357754 None:intergenic
GGGGTGAGAAAATGGAAATG+GGG 0.477481 4_2:-48354795 None:intergenic
GAGATTTGAGTGTGGATCGT+TGG 0.477635 4_2:-48354553 None:intergenic
TCAGACTTCTTGTATTTCAT+CGG 0.478693 4_2:+48355449 Msa0603690:CDS
ACCGGAAAATGCTGCAACAA+AGG 0.478914 4_2:-48355124 None:intergenic
TGAGGCTGATGAAGCTTTAA+CGG 0.481143 4_2:-48354842 None:intergenic
TGGAGGTGGATTGGAAATGT+TGG 0.481668 4_2:-48354735 None:intergenic
GGGGTGTGTGAATTGATTTG+AGG 0.483624 4_2:-48354774 None:intergenic
GAGGGGCTTGAAGTTGAAAG+TGG 0.484690 4_2:-48354755 None:intergenic
ACCCAATCCCATAATGAGTA+AGG 0.487805 4_2:-48357692 None:intergenic
AGTTGAAAGTGGAGGTGGAT+TGG 0.490476 4_2:-48354744 None:intergenic
TCTATTTGGTGGAAAGCCAT+TGG 0.490613 4_2:+48357819 Msa0603690:CDS
GTTGCTTGTGGAAGTAATGT+TGG 0.490862 4_2:+48355378 Msa0603690:CDS
AGCCATTGGCTTGTGGTAAA+GGG 0.492080 4_2:+48357833 Msa0603690:exon
CAAACCATTAATACAAAAGT+TGG 0.492179 4_2:-48354378 None:intergenic
GCGACAGCGCCGAGTGGGAG+TGG 0.492621 4_2:-48355060 None:intergenic
TTAATGGCGGCGCCTTGCCA+TGG 0.493571 4_2:-48354910 None:intergenic
GCTGGTGGCGGTGCTGGTGA+TGG 0.493807 4_2:-48354883 None:intergenic
TTTGGCAAGTGGAACATAGT+TGG 0.494233 4_2:-48357736 None:intergenic
GTTAGTGGCGGTGGTTGTGG+TGG 0.495351 4_2:-48354674 None:intergenic
TGTGCCGGGTTTGGTTTCGT+TGG 0.495658 4_2:+48355575 Msa0603690:CDS
TGCCATGGTTGAGCTGGTGG+CGG 0.495781 4_2:-48354895 None:intergenic
CGGTTTCCGCGAGGGCTGGT+GGG 0.496485 4_2:+48355325 Msa0603690:CDS
CTTAGCTGAGGGTGTTGCCT+GGG 0.499437 4_2:+48356699 Msa0603690:CDS
AAAACCAACGAAACCAAACC+CGG 0.499703 4_2:-48355579 None:intergenic
CTTGAAGTTGAAAGTGGAGG+TGG 0.502199 4_2:-48354749 None:intergenic
TCTCATTACTTCTTTGCCAG+TGG 0.502483 4_2:+48357555 Msa0603690:CDS
GTTATTACACAGTTTGTTGG+TGG 0.503396 4_2:+48357477 Msa0603690:intron
AATGAGTAAGGCCACCCATA+AGG 0.504250 4_2:-48357680 None:intergenic
TAAGCTTGCTAGGGAGAAGT+TGG 0.504708 4_2:+48355662 Msa0603690:CDS
GTTTGTTGGTGAGGAATTGG+TGG 0.505126 4_2:-48354486 None:intergenic
AACACCATGGCTCCGAAGAA+TGG 0.506954 4_2:-48357642 None:intergenic
AGTTATTAGAAATTTAGAAT+GGG 0.511367 4_2:-48354585 None:intergenic
TGTAGATTTATACGGGAACC+TGG 0.511557 4_2:+48357990 Msa0603690:three_prime_UTR
AAGTCTCTTTGTGTTGCTTG+TGG 0.513639 4_2:+48355366 Msa0603690:CDS
AGTAATGAGAGTAGAAGTAG+AGG 0.513935 4_2:-48357542 None:intergenic
TTGGACTCGGGTCTATTTGG+TGG 0.514343 4_2:+48357808 Msa0603690:CDS
TGGTCAGACGATTGGGTGGG+TGG 0.516116 4_2:+48355533 Msa0603690:CDS
AAACCACGTGAGAGTATCCC+AGG 0.517350 4_2:-48356716 None:intergenic
GAGGAAGGGGAGGTTAGTGG+CGG 0.518545 4_2:-48354686 None:intergenic
TAGTGAAGCATTGTTAGCTC+CGG 0.521742 4_2:+48355293 Msa0603690:CDS
TGGTTCGTTCCAACCCCTGA+AGG 0.522278 4_2:+48354970 Msa0603690:CDS
GATTCCTTCGGTTTCCGCGA+GGG 0.524260 4_2:+48355317 Msa0603690:CDS
TCCACCATTCTTCGGAGCCA+TGG 0.524824 4_2:+48357638 Msa0603690:CDS
GCTAAAGCGGCTATTGTGCC+GGG 0.525560 4_2:+48355561 Msa0603690:CDS
GGATTTGGAATGGACGGTGG+AGG 0.527726 4_2:-48354532 None:intergenic
GGTTGTGGTGGTGAGAGGAA+TGG 0.529022 4_2:-48354662 None:intergenic
TAGCTGTACTCCTCATCTCA+GGG 0.532808 4_2:+48356656 Msa0603690:CDS
ATCGTTGGATTTGGAATGGA+CGG 0.533141 4_2:-48354538 None:intergenic
GTTTCGGTGATCCAATTCCA+TGG 0.533520 4_2:+48355145 Msa0603690:CDS
TGCGGCTTTGTTTGTTGGTG+AGG 0.537796 4_2:-48354495 None:intergenic
TGTTCCACTTGCCAAATGGT+GGG 0.537877 4_2:+48357743 Msa0603690:CDS
ACTATGTTCCACTTGCCAAA+TGG 0.539221 4_2:+48357739 Msa0603690:CDS
CCGGAAAATGCTGCAACAAA+GGG 0.544003 4_2:-48355123 None:intergenic
ACCATATTTGTTCAAGTACC+CGG 0.544916 4_2:-48356758 None:intergenic
CAACTACTCGCAATCTTCCT+CGG 0.550700 4_2:+48355012 Msa0603690:CDS
TTCTTTGCACTGTATAGCAG+TGG 0.551692 4_2:-48358201 None:intergenic
CCTTGCCATGGTTGAGCTGG+TGG 0.552124 4_2:-48354898 None:intergenic
AGTAAGGCCACCCATAAGGT+TGG 0.553168 4_2:-48357676 None:intergenic
AGGTGGATTGGAAATGTTGG+CGG 0.554049 4_2:-48354732 None:intergenic
TCCTCACCGGAGTAATACTC+TGG 0.554653 4_2:+48354950 Msa0603690:CDS
GCGGTGGTTGTGGTGGTGAG+AGG 0.555216 4_2:-48354667 None:intergenic
GTACCCGGCCATTGCAATGA+GGG 0.555519 4_2:-48356743 None:intergenic
GTGGATCGTTGGATTTGGAA+TGG 0.556846 4_2:-48354542 None:intergenic
GATTGGAAATGTTGGCGGAG+AGG 0.556948 4_2:-48354727 None:intergenic
GAATTGCGACAGCGCCGAGT+GGG 0.557728 4_2:-48355065 None:intergenic
ACCATGGCTCCGAAGAATGG+TGG 0.558163 4_2:-48357639 None:intergenic
AAGGCGTATCCCGCAACGCA+TGG 0.558343 4_2:+48354989 Msa0603690:CDS
CGAGTAGTTGCCATGCGTTG+CGG 0.559108 4_2:-48354999 None:intergenic
GAAATGTTGGCGGAGAGGTG+GGG 0.560822 4_2:-48354722 None:intergenic
ATGTTCCACTTGCCAAATGG+TGG 0.562922 4_2:+48357742 Msa0603690:CDS
AGATTATTTCTAGAAAGCAT+AGG 0.568501 4_2:-48357955 None:intergenic
GTTTGCTGCCCTCATTGCAA+TGG 0.568959 4_2:+48356735 Msa0603690:CDS
TCATCTCAGGGGTTGTAACA+TGG 0.568969 4_2:+48356668 Msa0603690:CDS
TGTGGAAGTAATGTTGGTGA+TGG 0.570062 4_2:+48355384 Msa0603690:CDS
GAGTACAGCTAATCCAAGAA+TGG 0.571107 4_2:-48356644 None:intergenic
AAAATGCTGCAACAAAGGGT+AGG 0.573942 4_2:-48355119 None:intergenic
GGCCCTTTACCACAAGCCAA+TGG 0.574870 4_2:-48357835 None:intergenic
GTTCCACTTGCCAAATGGTG+GGG 0.575270 4_2:+48357744 Msa0603690:CDS
CCAGCCCTCGCGGAAACCGA+AGG 0.575388 4_2:-48355321 None:intergenic
AATGAGAGTAGAAGTAGAGG+AGG 0.575863 4_2:-48357539 None:intergenic
GATGGGACTGAGGAGAAGCT+TGG 0.578401 4_2:+48355402 Msa0603690:CDS
GTGCCGTGAGAGTGAAGTTG+AGG 0.579701 4_2:-48354608 None:intergenic
AAATGCTGCAACAAAGGGTA+GGG 0.581318 4_2:-48355118 None:intergenic
GCGGAAACCGAAGGAATCGC+CGG 0.582377 4_2:-48355312 None:intergenic
TAACCCCACCATTTGGCAAG+TGG 0.583744 4_2:-48357747 None:intergenic
GTGGGTGGATTGGGCTAAAG+CGG 0.585659 4_2:+48355548 Msa0603690:CDS
GGTGAGAAAATGGAAATGGG+GGG 0.585964 4_2:-48354793 None:intergenic
CACCGCCACCAGCTCAACCA+TGG 0.588181 4_2:+48354893 Msa0603690:CDS
CGATTGGTCAGACGATTGGG+TGG 0.589544 4_2:+48355529 Msa0603690:CDS
AAAGTAAGAGTAGCACATAA+CGG 0.590850 4_2:-48355501 None:intergenic
GTTCAGTCAAACTGTAGTCA+AGG 0.591753 4_2:+48356792 Msa0603690:CDS
CCACCAGCTCAACCATGGCA+AGG 0.591998 4_2:+48354898 Msa0603690:CDS
TTCCTCTCCAACCTTATGGG+TGG 0.592563 4_2:+48357669 Msa0603690:CDS
ATGTTGGCGGAGAGGTGGGG+AGG 0.594624 4_2:-48354719 None:intergenic
ATCACACAACCACTCCCACT+CGG 0.602206 4_2:+48355051 Msa0603690:CDS
GGCCACCCATAAGGTTGGAG+AGG 0.603882 4_2:-48357671 None:intergenic
GAGAGGAATGGAAGCCATAG+TGG 0.606679 4_2:-48354650 None:intergenic
GCTGGTGATGGAGATGAAGC+TGG 0.606849 4_2:-48354871 None:intergenic
ATCTTCCTCGGAACTATCGT+CGG 0.607025 4_2:+48355024 Msa0603690:CDS
AAGCTTTAACGGTGAGAGAG+TGG 0.609075 4_2:-48354831 None:intergenic
CTCATAGCATCAATCCTCAC+CGG 0.612000 4_2:+48354937 Msa0603690:CDS
AATGGAAGCCATAGTGGTGG+TGG 0.613530 4_2:-48354644 None:intergenic
AGATGAAGCTGGTGTGATTG+AGG 0.613599 4_2:-48354860 None:intergenic
AAAGCTAAACAAATCAACCA+TGG 0.616605 4_2:-48355162 None:intergenic
AACTTCTCCCTAGCAAGCTT+AGG 0.616618 4_2:-48355660 None:intergenic
GATTGGTCAGACGATTGGGT+GGG 0.616770 4_2:+48355530 Msa0603690:CDS
CGATTCCTTCGGTTTCCGCG+AGG 0.617148 4_2:+48355316 Msa0603690:CDS
GTGGAAGTAATGTTGGTGAT+GGG 0.620357 4_2:+48355385 Msa0603690:CDS
ATGGAAAGAGTGCTTAGCTG+AGG 0.620669 4_2:+48356687 Msa0603690:CDS
GGTGTGTGAATTGATTTGAG+GGG 0.624120 4_2:-48354772 None:intergenic
ACTCCTCAACTTCACTCTCA+CGG 0.625452 4_2:+48354605 Msa0603690:five_prime_UTR
TAATGTTGGTGATGGGACTG+AGG 0.627098 4_2:+48355392 Msa0603690:CDS
TAAATAATATACAAAATCAA+CGG 0.629135 4_2:-48355606 None:intergenic
AGTACCCGGCCATTGCAATG+AGG 0.629202 4_2:-48356744 None:intergenic
ATGTTACAACCCCTGAGATG+AGG 0.630520 4_2:-48356666 None:intergenic
TGATGCGCCTAAGCTTGCTA+GGG 0.633419 4_2:+48355653 Msa0603690:CDS
CTTTCTAGAAATAATCTGAG+AGG 0.634506 4_2:+48357961 Msa0603690:three_prime_UTR
TGGAAAGAGTGCTTAGCTGA+GGG 0.636445 4_2:+48356688 Msa0603690:CDS
AAATATCCCACCAGCCCTCG+CGG 0.640612 4_2:-48355331 None:intergenic
GGGCTTGAAGTTGAAAGTGG+AGG 0.641202 4_2:-48354752 None:intergenic
GGGAGAAGTTGGAGAAAATG+GGG 0.643102 4_2:+48355673 Msa0603690:CDS
GGTGGAAAGCCATTGGCTTG+TGG 0.643800 4_2:+48357826 Msa0603690:CDS
GTTGCGGGATACGCCTTCAG+GGG 0.648907 4_2:-48354983 None:intergenic
GTTGGATTTGGAATGGACGG+TGG 0.651084 4_2:-48354535 None:intergenic
TGCTATGAGTGGTTTAATGG+CGG 0.652212 4_2:-48354923 None:intergenic
GGACTAGATTTCAACGTCGG+AGG 0.655352 4_2:-48355630 None:intergenic
CAAGTTGTCAAAGTCGAGCG+AGG 0.658869 4_2:+48354434 Msa0603690:five_prime_UTR
AGCTGTACTCCTCATCTCAG+GGG 0.662859 4_2:+48356657 Msa0603690:CDS
AACGAACCAGAGTATTACTC+CGG 0.667915 4_2:-48354956 None:intergenic
GTGAGGATTGATGCTATGAG+TGG 0.673480 4_2:-48354934 None:intergenic
ACACAAAGAGACTTAACCAA+CGG 0.679129 4_2:-48355357 None:intergenic
AGATCTAAAACGATCAGCAG+CGG 0.683681 4_2:-48358016 None:intergenic
TCACAAATTGATACGCAACA+CGG 0.686307 4_2:-48355224 None:intergenic
AGAATTGCGACAGCGCCGAG+TGG 0.695195 4_2:-48355066 None:intergenic
GAGGTTGGGATTGGAATATG+CGG 0.697128 4_2:-48354513 None:intergenic
TACCGTAAGAAACAGAGTAG+CGG 0.697217 4_2:-48355724 None:intergenic
TGATTCCGACGATAGTTCCG+AGG 0.697476 4_2:-48355029 None:intergenic
AGTTCCCAGAGCAGTAGCGA+CGG 0.700288 4_2:-48357616 None:intergenic
TTGCCTGGGATACTCTCACG+TGG 0.701370 4_2:+48356713 Msa0603690:CDS
TCAGGACTAGATTTCAACGT+CGG 0.702776 4_2:-48355633 None:intergenic
ACCAGAGTATTACTCCGGTG+AGG 0.718515 4_2:-48354951 None:intergenic
GGAGAGGAATGACAACACCA+TGG 0.744875 4_2:-48357655 None:intergenic
ATGTGAGAGAGATTTGAGTG+TGG 0.747908 4_2:-48354561 None:intergenic
AGGAATGGAAGCCATAGTGG+TGG 0.750364 4_2:-48354647 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAATATACAAAATCAA+CGG - chr4_2:48355609-48355628 None:intergenic 10.0%
!!! TTAAATTTGTTTTCTAAATT+AGG + chr4_2:48356253-48356272 Msa0603690:intron 10.0%
!!! AGTTATTAGAAATTTAGAAT+GGG - chr4_2:48354588-48354607 None:intergenic 15.0%
!! TTAGAAAACAAATTTAAAGA+TGG - chr4_2:48356250-48356269 None:intergenic 15.0%
!! CAAAAAATACTAAAATTCTA+AGG - chr4_2:48356538-48356557 None:intergenic 15.0%
!!! CTTAGAATTTTAGTATTTTT+TGG + chr4_2:48356536-48356555 Msa0603690:intron 15.0%
!!! ATTTATATGTGATTATGTTT+TGG + chr4_2:48357229-48357248 Msa0603690:intron 15.0%
!! TGAAATTCTATCATAAAATA+TGG - chr4_2:48357388-48357407 None:intergenic 15.0%
!!! AATTGCTATTTTCATTTTAA+TGG + chr4_2:48358148-48358167 Msa0603690:three_prime_UTR 15.0%
!!! ATTGCTATTTTCATTTTAAT+GGG + chr4_2:48358149-48358168 Msa0603690:three_prime_UTR 15.0%
!!! TTTGTTTTGTAATTTAGTGA+CGG + chr4_2:48354397-48354416 Msa0603690:five_prime_UTR 20.0%
!! GAGTTATTAGAAATTTAGAA+TGG - chr4_2:48354589-48354608 None:intergenic 20.0%
!! TAGATAATAAACCTGAAATT+GGG + chr4_2:48355865-48355884 Msa0603690:intron 20.0%
!!! TTTTCTTAAAATTTTGGGTT+AGG - chr4_2:48355948-48355967 None:intergenic 20.0%
!!! TTGGCTTTTCTTAAAATTTT+GGG - chr4_2:48355953-48355972 None:intergenic 20.0%
!!! ATTGGCTTTTCTTAAAATTT+TGG - chr4_2:48355954-48355973 None:intergenic 20.0%
!!! TGCTATTTATTTAAGTGTAA+TGG + chr4_2:48357318-48357337 Msa0603690:intron 20.0%
!! CTCATAAATAATAATGTAAC+TGG - chr4_2:48358050-48358069 None:intergenic 20.0%
!!! TTAGCTTTTTTCTTTGCTAA+AGG + chr4_2:48355177-48355196 Msa0603690:CDS 25.0%
!! TATCAATTTGTGAAGCTTTT+TGG + chr4_2:48355234-48355253 Msa0603690:CDS 25.0%
! TTTGTAGATGTTATGTAGTT+GGG + chr4_2:48355842-48355861 Msa0603690:intron 25.0%
! GTAGATAATAAACCTGAAAT+TGG + chr4_2:48355864-48355883 Msa0603690:intron 25.0%
!!! TAGATTGGCTTTTCTTAAAT+TGG - chr4_2:48355972-48355991 None:intergenic 25.0%
! GTTAACAGTATATAGTAGAA+TGG + chr4_2:48356073-48356092 Msa0603690:intron 25.0%
! GTCTAATAATCATAAAAAGC+TGG - chr4_2:48357044-48357063 None:intergenic 25.0%
! TCTAGTAAGTAATGATTGAT+CGG + chr4_2:48357073-48357092 Msa0603690:intron 25.0%
! ATCACATATAAATACCAGAA+GGG - chr4_2:48357222-48357241 None:intergenic 25.0%
! AATCACATATAAATACCAGA+AGG - chr4_2:48357223-48357242 None:intergenic 25.0%
! AATAAATAGCATTTCTTCAG+TGG - chr4_2:48357309-48357328 None:intergenic 25.0%
! TGTTGCAAAAATTCTATATC+AGG - chr4_2:48357859-48357878 None:intergenic 25.0%
!!! AGATTATTTCTAGAAAGCAT+AGG - chr4_2:48357958-48357977 None:intergenic 25.0%
!!! GGTTTTGTTGTAGATTTATA+CGG + chr4_2:48357982-48358001 Msa0603690:three_prime_UTR 25.0%
!!! GTTTTGTTGTAGATTTATAC+GGG + chr4_2:48357983-48358002 Msa0603690:three_prime_UTR 25.0%
! CAATTGTACTGAAATCTTTA+TGG - chr4_2:48358133-48358152 None:intergenic 25.0%
!!! CTATTTTCATTTTAATGGGA+TGG + chr4_2:48358153-48358172 Msa0603690:three_prime_UTR 25.0%
! AAGTGTGTGTGAAATAATTA+AGG + chr4_2:48358177-48358196 Msa0603690:three_prime_UTR 25.0%
AAACAAATCAACCATGGAAT+TGG - chr4_2:48355159-48355178 None:intergenic 30.0%
AAAGCTAAACAAATCAACCA+TGG - chr4_2:48355165-48355184 None:intergenic 30.0%
!! GCTAAAGGTTTTATCAAAAC+TGG + chr4_2:48355192-48355211 Msa0603690:CDS 30.0%
!! GGTTTTATCAAAACTGGATT+AGG + chr4_2:48355198-48355217 Msa0603690:CDS 30.0%
!! TTTTTGGTAGTTCTTCGTTA+GGG + chr4_2:48355250-48355269 Msa0603690:CDS 30.0%
TCAGACTTCTTGTATTTCAT+CGG + chr4_2:48355449-48355468 Msa0603690:CDS 30.0%
AAAGTAAGAGTAGCACATAA+CGG - chr4_2:48355504-48355523 None:intergenic 30.0%
ACTCTTACTTTGAATTCGAT+TGG + chr4_2:48355513-48355532 Msa0603690:CDS 30.0%
! ATTTTCTCATTAGTCGTCAT+AGG - chr4_2:48355699-48355718 None:intergenic 30.0%
TAGCGTAACAACATGAAATT+GGG + chr4_2:48355791-48355810 Msa0603690:intron 30.0%
! GGTAGATAACTTCACTATTT+TGG + chr4_2:48355812-48355831 Msa0603690:intron 30.0%
GTTTGTAGATGTTATGTAGT+TGG + chr4_2:48355841-48355860 Msa0603690:intron 30.0%
! GGTAGATAACTTCACTATTT+TGG + chr4_2:48355812-48355831 Msa0603690:intron 30.0%
TGTTAACATTTGATTCCCAA+GGG - chr4_2:48356060-48356079 None:intergenic 30.0%
TGAGTGACCTATAAATCATT+AGG + chr4_2:48356202-48356221 Msa0603690:intron 30.0%
ACCTATAAATCATTAGGCAT+TGG + chr4_2:48356208-48356227 Msa0603690:intron 30.0%
ACCAATGCCTAATGATTTAT+AGG - chr4_2:48356212-48356231 None:intergenic 30.0%
!!! GATTAGTTTTGAAGACCATT+AGG - chr4_2:48356290-48356309 None:intergenic 30.0%
! CAGGAATTTTTGCAATATCA+AGG - chr4_2:48356347-48356366 None:intergenic 30.0%
GCAAAAATTCCTGACAAATA+TGG + chr4_2:48356354-48356373 Msa0603690:intron 30.0%
TACACTTAGAAAGTTTAGAC+AGG - chr4_2:48356825-48356844 None:intergenic 30.0%
AACACATCGGTAATATTGTA+TGG - chr4_2:48357355-48357374 None:intergenic 30.0%
CTCTTTCATTGACATAATCA+AGG - chr4_2:48357448-48357467 None:intergenic 30.0%
ACTGTTATTACACAGTTTGT+TGG + chr4_2:48357474-48357493 Msa0603690:intron 30.0%
GTATTGTTAACATTGTCATC+TGG + chr4_2:48357784-48357803 Msa0603690:CDS 30.0%
! CTTTCTAGAAATAATCTGAG+AGG + chr4_2:48357961-48357980 Msa0603690:three_prime_UTR 30.0%
GTAAACACATAACGTTATTC+AGG + chr4_2:48358072-48358091 Msa0603690:three_prime_UTR 30.0%
! TTTGTTTGTTGGTGAGGAAT+TGG - chr4_2:48354492-48354511 None:intergenic 35.0%
TGATGCTATGAGTGGTTTAA+TGG - chr4_2:48354929-48354948 None:intergenic 35.0%
TCACAAATTGATACGCAACA+CGG - chr4_2:48355227-48355246 None:intergenic 35.0%
!! CTTTTTGGTAGTTCTTCGTT+AGG + chr4_2:48355249-48355268 Msa0603690:CDS 35.0%
GTTAGGGTTAGGTTATAGTT+TGG + chr4_2:48355266-48355285 Msa0603690:CDS 35.0%
ACACAAAGAGACTTAACCAA+CGG - chr4_2:48355360-48355379 None:intergenic 35.0%
GTAGCGTAACAACATGAAAT+TGG + chr4_2:48355790-48355809 Msa0603690:intron 35.0%
GAAGTTATCTACCCAATTTC+AGG - chr4_2:48355805-48355824 None:intergenic 35.0%
!!! CTCTGTTTGCTTAGTTTTGA+AGG + chr4_2:48355911-48355930 Msa0603690:intron 35.0%
AGCCAATCTATATGCAAAGT+TGG + chr4_2:48355982-48356001 Msa0603690:intron 35.0%
GACCAACTTTGCATATAGAT+TGG - chr4_2:48355987-48356006 None:intergenic 35.0%
CTGTTAACATTTGATTCCCA+AGG - chr4_2:48356061-48356080 None:intergenic 35.0%
TTGAGTCCAATTTGCATTGT+TGG + chr4_2:48356140-48356159 Msa0603690:intron 35.0%
TGAGTCCAATTTGCATTGTT+GGG + chr4_2:48356141-48356160 Msa0603690:intron 35.0%
!!! TAGTTTTGAAGACCATTAGG+AGG - chr4_2:48356287-48356306 None:intergenic 35.0%
TGCAATATCAAGGATAGCAA+CGG - chr4_2:48356337-48356356 None:intergenic 35.0%
AATGCAACTACTACTAGACA+AGG - chr4_2:48356464-48356483 None:intergenic 35.0%
GTATACCTTGTGTCTTGATT+AGG + chr4_2:48356487-48356506 Msa0603690:intron 35.0%
ATTCACCTAATCAAGACACA+AGG - chr4_2:48356495-48356514 None:intergenic 35.0%
TGGTAAAATTGAATGAGGGA+TGG - chr4_2:48356571-48356590 None:intergenic 35.0%
! ATCCCTCATTCAATTTTACC+AGG + chr4_2:48356570-48356589 Msa0603690:intron 35.0%
CACCTGGTAAAATTGAATGA+GGG - chr4_2:48356575-48356594 None:intergenic 35.0%
! CTCATTCAATTTTACCAGGT+GGG + chr4_2:48356574-48356593 Msa0603690:intron 35.0%
ACCATATTTGTTCAAGTACC+CGG - chr4_2:48356761-48356780 None:intergenic 35.0%
ACAAATATGGTCTCATCTCT+TGG + chr4_2:48356770-48356789 Msa0603690:CDS 35.0%
TATTTCAAAACATGCTCCAG+TGG - chr4_2:48356998-48357017 None:intergenic 35.0%
ACTAAATAAAACCTCCCTTC+TGG + chr4_2:48357205-48357224 Msa0603690:intron 35.0%
ACATATAAATACCAGAAGGG+AGG - chr4_2:48357219-48357238 None:intergenic 35.0%
GACTAAGAAGTAAGAACTAG+TGG - chr4_2:48357267-48357286 None:intergenic 35.0%
TTTCTTCAGTGGCAATTACT+AGG - chr4_2:48357298-48357317 None:intergenic 35.0%
!! GTTATTACACAGTTTGTTGG+TGG + chr4_2:48357477-48357496 Msa0603690:intron 35.0%
! CTTTCATGGCAACTATCTTT+TGG + chr4_2:48357507-48357526 Msa0603690:CDS 35.0%
! GCAACTATCTTTTGGTATAC+TGG + chr4_2:48357515-48357534 Msa0603690:CDS 35.0%
AGTAATGAGAGTAGAAGTAG+AGG - chr4_2:48357545-48357564 None:intergenic 35.0%
!! TGCTGATCGTTTTAGATCTT+GGG + chr4_2:48358020-48358039 Msa0603690:three_prime_UTR 35.0%
!! GAATATGCGGCTTTGTTTGT+TGG - chr4_2:48354503-48354522 None:intergenic 40.0%
! ATCGTTGGATTTGGAATGGA+CGG - chr4_2:48354541-48354560 None:intergenic 40.0%
ATGTGAGAGAGATTTGAGTG+TGG - chr4_2:48354564-48354583 None:intergenic 40.0%
!! GGTGTGTGAATTGATTTGAG+GGG - chr4_2:48354775-48354794 None:intergenic 40.0%
!! GGGTGTGTGAATTGATTTGA+GGG - chr4_2:48354776-48354795 None:intergenic 40.0%
AGGGGTGAGAAAATGGAAAT+GGG - chr4_2:48354799-48354818 None:intergenic 40.0%
TGAAATGAGGGGTGAGAAAA+TGG - chr4_2:48354806-48354825 None:intergenic 40.0%
!!! AGAGTGGCGTTTTGAAATGA+GGG - chr4_2:48354818-48354837 None:intergenic 40.0%
! TGAGGCTGATGAAGCTTTAA+CGG - chr4_2:48354845-48354864 None:intergenic 40.0%
TGCTATGAGTGGTTTAATGG+CGG - chr4_2:48354926-48354945 None:intergenic 40.0%
! AACGAACCAGAGTATTACTC+CGG - chr4_2:48354959-48354978 None:intergenic 40.0%
AAATGCTGCAACAAAGGGTA+GGG - chr4_2:48355121-48355140 None:intergenic 40.0%
AAAATGCTGCAACAAAGGGT+AGG - chr4_2:48355122-48355141 None:intergenic 40.0%
!! TAGTGAAGCATTGTTAGCTC+CGG + chr4_2:48355293-48355312 Msa0603690:CDS 40.0%
!! TGGTGGGATATTTTTACCGT+TGG + chr4_2:48355341-48355360 Msa0603690:CDS 40.0%
!! AAGTCTCTTTGTGTTGCTTG+TGG + chr4_2:48355366-48355385 Msa0603690:CDS 40.0%
GTTGCTTGTGGAAGTAATGT+TGG + chr4_2:48355378-48355397 Msa0603690:CDS 40.0%
! TGTGGAAGTAATGTTGGTGA+TGG + chr4_2:48355384-48355403 Msa0603690:CDS 40.0%
!! GTGGAAGTAATGTTGGTGAT+GGG + chr4_2:48355385-48355404 Msa0603690:CDS 40.0%
! AATTCGATTGGTCAGACGAT+TGG + chr4_2:48355525-48355544 Msa0603690:CDS 40.0%
! ATTCGATTGGTCAGACGATT+GGG + chr4_2:48355526-48355545 Msa0603690:CDS 40.0%
AAAACCAACGAAACCAAACC+CGG - chr4_2:48355582-48355601 None:intergenic 40.0%
TCAGGACTAGATTTCAACGT+CGG - chr4_2:48355636-48355655 None:intergenic 40.0%
TAGGGAGAAGTTGGAGAAAA+TGG + chr4_2:48355671-48355690 Msa0603690:CDS 40.0%
AGGGAGAAGTTGGAGAAAAT+GGG + chr4_2:48355672-48355691 Msa0603690:CDS 40.0%
TACCGTAAGAAACAGAGTAG+CGG - chr4_2:48355727-48355746 None:intergenic 40.0%
TGGCATCGTAAGTTTGTGAT+GGG - chr4_2:48356024-48356043 None:intergenic 40.0%
ATGGCATCGTAAGTTTGTGA+TGG - chr4_2:48356025-48356044 None:intergenic 40.0%
ACATTTGATTCCCAAGGGTA+TGG - chr4_2:48356055-48356074 None:intergenic 40.0%
AATATCAAGGATAGCAACGG+TGG - chr4_2:48356334-48356353 None:intergenic 40.0%
CCTGACAAATATGGATGATG+CGG + chr4_2:48356363-48356382 Msa0603690:intron 40.0%
AAATATGGATGATGCGGTCA+CGG + chr4_2:48356369-48356388 Msa0603690:intron 40.0%
CCACCTGGTAAAATTGAATG+AGG - chr4_2:48356576-48356595 None:intergenic 40.0%
! CCTCATTCAATTTTACCAGG+TGG + chr4_2:48356573-48356592 Msa0603690:intron 40.0%
GAGTACAGCTAATCCAAGAA+TGG - chr4_2:48356647-48356666 None:intergenic 40.0%
GTTCAGTCAAACTGTAGTCA+AGG + chr4_2:48356792-48356811 Msa0603690:CDS 40.0%
!! ATCTGTTCTCTGGGGTAAAA+TGG + chr4_2:48356908-48356927 Msa0603690:intron 40.0%
ATCAGGCATCTTGGTTCATT+TGG + chr4_2:48357127-48357146 Msa0603690:intron 40.0%
TCAGGCATCTTGGTTCATTT+GGG + chr4_2:48357128-48357147 Msa0603690:intron 40.0%
ATGCTGATCAACTCAGAAGT+AGG - chr4_2:48357163-48357182 None:intergenic 40.0%
GTTGATCAGCATCTGTTTCA+TGG + chr4_2:48357171-48357190 Msa0603690:intron 40.0%
TGGCAATTACTAGGACTCAT+AGG - chr4_2:48357289-48357308 None:intergenic 40.0%
TGGTGCATAATGCAACACAT+CGG - chr4_2:48357368-48357387 None:intergenic 40.0%
!! TACACAGTTTGTTGGTGGAT+TGG + chr4_2:48357482-48357501 Msa0603690:intron 40.0%
!! ACACAGTTTGTTGGTGGATT+GGG + chr4_2:48357483-48357502 Msa0603690:intron 40.0%
AATGAGAGTAGAAGTAGAGG+AGG - chr4_2:48357542-48357561 None:intergenic 40.0%
TCTCATTACTTCTTTGCCAG+TGG + chr4_2:48357555-48357574 Msa0603690:CDS 40.0%
TCATTCCTCTCCAACCTTAT+GGG + chr4_2:48357666-48357685 Msa0603690:CDS 40.0%
GCCTTACTCATTATGGGATT+GGG + chr4_2:48357691-48357710 Msa0603690:CDS 40.0%
ACCCAATCCCATAATGAGTA+AGG - chr4_2:48357695-48357714 None:intergenic 40.0%
! TAGTTGGCACCGAAAAATAC+TGG - chr4_2:48357723-48357742 None:intergenic 40.0%
TTTGGCAAGTGGAACATAGT+TGG - chr4_2:48357739-48357758 None:intergenic 40.0%
ACTATGTTCCACTTGCCAAA+TGG + chr4_2:48357739-48357758 Msa0603690:CDS 40.0%
GTTAACATTGTCATCTGGCT+TGG + chr4_2:48357789-48357808 Msa0603690:CDS 40.0%
! TCTATTTGGTGGAAAGCCAT+TGG + chr4_2:48357819-48357838 Msa0603690:CDS 40.0%
TGTAGATTTATACGGGAACC+TGG + chr4_2:48357990-48358009 Msa0603690:three_prime_UTR 40.0%
! AGATCTAAAACGATCAGCAG+CGG - chr4_2:48358019-48358038 None:intergenic 40.0%
!! CTGCTGATCGTTTTAGATCT+TGG + chr4_2:48358019-48358038 Msa0603690:three_prime_UTR 40.0%
! GTTTGTTGGTGAGGAATTGG+TGG - chr4_2:48354489-48354508 None:intergenic 45.0%
GAGGTTGGGATTGGAATATG+CGG - chr4_2:48354516-48354535 None:intergenic 45.0%
GTGGATCGTTGGATTTGGAA+TGG - chr4_2:48354545-48354564 None:intergenic 45.0%
TGAGTGTGGATCGTTGGATT+TGG - chr4_2:48354550-48354569 None:intergenic 45.0%
GAGATTTGAGTGTGGATCGT+TGG - chr4_2:48354556-48354575 None:intergenic 45.0%
ACTCCTCAACTTCACTCTCA+CGG + chr4_2:48354605-48354624 Msa0603690:five_prime_UTR 45.0%
!! AGGTGGATTGGAAATGTTGG+CGG - chr4_2:48354735-48354754 None:intergenic 45.0%
!! TGGAGGTGGATTGGAAATGT+TGG - chr4_2:48354738-48354757 None:intergenic 45.0%
AGTTGAAAGTGGAGGTGGAT+TGG - chr4_2:48354747-48354766 None:intergenic 45.0%
CTTGAAGTTGAAAGTGGAGG+TGG - chr4_2:48354752-48354771 None:intergenic 45.0%
!! GGGGTGTGTGAATTGATTTG+AGG - chr4_2:48354777-48354796 None:intergenic 45.0%
GGTGAGAAAATGGAAATGGG+GGG - chr4_2:48354796-48354815 None:intergenic 45.0%
GGGTGAGAAAATGGAAATGG+GGG - chr4_2:48354797-48354816 None:intergenic 45.0%
GGGGTGAGAAAATGGAAATG+GGG - chr4_2:48354798-48354817 None:intergenic 45.0%
GAGGGGTGAGAAAATGGAAA+TGG - chr4_2:48354800-48354819 None:intergenic 45.0%
!!! GAGTGGCGTTTTGAAATGAG+GGG - chr4_2:48354817-48354836 None:intergenic 45.0%
!!! GAGAGTGGCGTTTTGAAATG+AGG - chr4_2:48354819-48354838 None:intergenic 45.0%
! AAGCTTTAACGGTGAGAGAG+TGG - chr4_2:48354834-48354853 None:intergenic 45.0%
AGATGAAGCTGGTGTGATTG+AGG - chr4_2:48354863-48354882 None:intergenic 45.0%
GTGAGGATTGATGCTATGAG+TGG - chr4_2:48354937-48354956 None:intergenic 45.0%
CTCATAGCATCAATCCTCAC+CGG + chr4_2:48354937-48354956 Msa0603690:CDS 45.0%
CAACTACTCGCAATCTTCCT+CGG + chr4_2:48355012-48355031 Msa0603690:CDS 45.0%
ATCTTCCTCGGAACTATCGT+CGG + chr4_2:48355024-48355043 Msa0603690:CDS 45.0%
GCTGTCGCAATTCTAGGTTT+AGG + chr4_2:48355075-48355094 Msa0603690:CDS 45.0%
! TGCAACAAAGGGTAGGGTTT+TGG - chr4_2:48355115-48355134 None:intergenic 45.0%
CCGGAAAATGCTGCAACAAA+GGG - chr4_2:48355126-48355145 None:intergenic 45.0%
! CCCTTTGTTGCAGCATTTTC+CGG + chr4_2:48355123-48355142 Msa0603690:CDS 45.0%
ACCGGAAAATGCTGCAACAA+AGG - chr4_2:48355127-48355146 None:intergenic 45.0%
! GTTGCAGCATTTTCCGGTTT+CGG + chr4_2:48355129-48355148 Msa0603690:CDS 45.0%
TGGAATTGGATCACCGAAAC+CGG - chr4_2:48355145-48355164 None:intergenic 45.0%
GTTTCGGTGATCCAATTCCA+TGG + chr4_2:48355145-48355164 Msa0603690:CDS 45.0%
GGTAGTTCTTCGTTAGGGTT+AGG + chr4_2:48355255-48355274 Msa0603690:CDS 45.0%
!! TAATGTTGGTGATGGGACTG+AGG + chr4_2:48355392-48355411 Msa0603690:CDS 45.0%
AGCCATCGCAGTCAAAAACA+TGG - chr4_2:48355475-48355494 None:intergenic 45.0%
!!! GGGTTTGGTTTCGTTGGTTT+TGG + chr4_2:48355581-48355600 Msa0603690:CDS 45.0%
AACTTCTCCCTAGCAAGCTT+AGG - chr4_2:48355663-48355682 None:intergenic 45.0%
!! TAAGCTTGCTAGGGAGAAGT+TGG + chr4_2:48355662-48355681 Msa0603690:CDS 45.0%
GGGAGAAGTTGGAGAAAATG+GGG + chr4_2:48355673-48355692 Msa0603690:CDS 45.0%
! GACCGCTACTCTGTTTCTTA+CGG + chr4_2:48355722-48355741 Msa0603690:CDS 45.0%
! TAAGTTTGTGATGGGGTGAG+TGG - chr4_2:48356016-48356035 None:intergenic 45.0%
GGCATCGTAAGTTTGTGATG+GGG - chr4_2:48356023-48356042 None:intergenic 45.0%
CATTTCTGTGCCATACCCTT+GGG + chr4_2:48356042-48356061 Msa0603690:intron 45.0%
TTGCTTCTCAACCGTTCTGT+TGG + chr4_2:48356098-48356117 Msa0603690:intron 45.0%
TGCTTCTCAACCGTTCTGTT+GGG + chr4_2:48356099-48356118 Msa0603690:intron 45.0%
GCACAAAAGTCCCAACAGAA+CGG - chr4_2:48356112-48356131 None:intergenic 45.0%
TCCAATTTGCATTGTTGGGC+TGG + chr4_2:48356145-48356164 Msa0603690:intron 45.0%
ACCAGCCCAACAATGCAAAT+TGG - chr4_2:48356149-48356168 None:intergenic 45.0%
TGGTCATTAGACAGATGGTG+TGG + chr4_2:48356165-48356184 Msa0603690:intron 45.0%
TAGGTTGTGCATCCTCCTAA+TGG + chr4_2:48356272-48356291 Msa0603690:intron 45.0%
CCGCATCATCCATATTTGTC+AGG - chr4_2:48356366-48356385 None:intergenic 45.0%
! AATTTTACCAGGTGGGACTC+TGG + chr4_2:48356581-48356600 Msa0603690:intron 45.0%
! ATTTTACCAGGTGGGACTCT+GGG + chr4_2:48356582-48356601 Msa0603690:intron 45.0%
TCCAAGAATGGCAGCAGTTA+CGG - chr4_2:48356635-48356654 None:intergenic 45.0%
TTAGCTGTACTCCTCATCTC+AGG + chr4_2:48356655-48356674 Msa0603690:CDS 45.0%
TAGCTGTACTCCTCATCTCA+GGG + chr4_2:48356656-48356675 Msa0603690:CDS 45.0%
ATGTTACAACCCCTGAGATG+AGG - chr4_2:48356669-48356688 None:intergenic 45.0%
TCATCTCAGGGGTTGTAACA+TGG + chr4_2:48356668-48356687 Msa0603690:CDS 45.0%
!! ATGGAAAGAGTGCTTAGCTG+AGG + chr4_2:48356687-48356706 Msa0603690:CDS 45.0%
!! TGGAAAGAGTGCTTAGCTGA+GGG + chr4_2:48356688-48356707 Msa0603690:CDS 45.0%
GCCGGGTACTTGAACAAATA+TGG + chr4_2:48356757-48356776 Msa0603690:CDS 45.0%
! TTTTGCCTGCATCTGTTCTC+TGG + chr4_2:48356898-48356917 Msa0603690:intron 45.0%
TTTGCCTGCATCTGTTCTCT+GGG + chr4_2:48356899-48356918 Msa0603690:intron 45.0%
TGTTTGACCAAACCAACCAC+TGG + chr4_2:48356979-48356998 Msa0603690:intron 45.0%
TCAAAACATGCTCCAGTGGT+TGG - chr4_2:48356994-48357013 None:intergenic 45.0%
GTGTTCTCTTGGAACACATC+AGG + chr4_2:48357110-48357129 Msa0603690:intron 45.0%
TTGGAACACATCAGGCATCT+TGG + chr4_2:48357118-48357137 Msa0603690:intron 45.0%
!! TTGGTGGATTGGGTCTTTCA+TGG + chr4_2:48357493-48357512 Msa0603690:CDS 45.0%
GTCATTCCTCTCCAACCTTA+TGG + chr4_2:48357665-48357684 Msa0603690:CDS 45.0%
AATGAGTAAGGCCACCCATA+AGG - chr4_2:48357683-48357702 None:intergenic 45.0%
! ATGGGTGGCCTTACTCATTA+TGG + chr4_2:48357684-48357703 Msa0603690:CDS 45.0%
! TGGGTGGCCTTACTCATTAT+GGG + chr4_2:48357685-48357704 Msa0603690:CDS 45.0%
GGCCTTACTCATTATGGGAT+TGG + chr4_2:48357690-48357709 Msa0603690:CDS 45.0%
! GGGTCAGCTCCAGTATTTTT+CGG + chr4_2:48357711-48357730 Msa0603690:CDS 45.0%
ATGTTCCACTTGCCAAATGG+TGG + chr4_2:48357742-48357761 Msa0603690:CDS 45.0%
TGTTCCACTTGCCAAATGGT+GGG + chr4_2:48357743-48357762 Msa0603690:CDS 45.0%
AAAGCCATAACCCCACCATT+TGG - chr4_2:48357757-48357776 None:intergenic 45.0%
!! ATTGTCATCTGGCTTGGACT+CGG + chr4_2:48357795-48357814 Msa0603690:CDS 45.0%
!! AAGCCATTGGCTTGTGGTAA+AGG + chr4_2:48357832-48357851 Msa0603690:CDS 45.0%
!! AGCCATTGGCTTGTGGTAAA+GGG + chr4_2:48357833-48357852 Msa0603690:exon 45.0%
CAAGTTGTCAAAGTCGAGCG+AGG + chr4_2:48354434-48354453 Msa0603690:five_prime_UTR 50.0%
!! TGCGGCTTTGTTTGTTGGTG+AGG - chr4_2:48354498-48354517 None:intergenic 50.0%
! GTTGGATTTGGAATGGACGG+TGG - chr4_2:48354538-48354557 None:intergenic 50.0%
!! CCATAGTGGTGGTGGTGATT+GGG - chr4_2:48354639-48354658 None:intergenic 50.0%
AATGGAAGCCATAGTGGTGG+TGG - chr4_2:48354647-48354666 None:intergenic 50.0%
AGGAATGGAAGCCATAGTGG+TGG - chr4_2:48354650-48354669 None:intergenic 50.0%
GAGAGGAATGGAAGCCATAG+TGG - chr4_2:48354653-48354672 None:intergenic 50.0%
GATTGGAAATGTTGGCGGAG+AGG - chr4_2:48354730-48354749 None:intergenic 50.0%
GGGCTTGAAGTTGAAAGTGG+AGG - chr4_2:48354755-48354774 None:intergenic 50.0%
GAGGGGCTTGAAGTTGAAAG+TGG - chr4_2:48354758-48354777 None:intergenic 50.0%
TCCTCACCGGAGTAATACTC+TGG + chr4_2:48354950-48354969 Msa0603690:CDS 50.0%
! ACCAGAGTATTACTCCGGTG+AGG - chr4_2:48354954-48354973 None:intergenic 50.0%
TGATTCCGACGATAGTTCCG+AGG - chr4_2:48355032-48355051 None:intergenic 50.0%
ATCACACAACCACTCCCACT+CGG + chr4_2:48355051-48355070 Msa0603690:CDS 50.0%
CTGAGGAGAAGCTTGGATCT+TGG + chr4_2:48355409-48355428 Msa0603690:CDS 50.0%
!! GGCCATGTTTTTGACTGCGA+TGG + chr4_2:48355470-48355489 Msa0603690:CDS 50.0%
! GATTGGTCAGACGATTGGGT+GGG + chr4_2:48355530-48355549 Msa0603690:CDS 50.0%
GGACTAGATTTCAACGTCGG+AGG - chr4_2:48355633-48355652 None:intergenic 50.0%
!! TGATGCGCCTAAGCTTGCTA+GGG + chr4_2:48355653-48355672 Msa0603690:CDS 50.0%
! CCAAGGGTATGGCACAGAAA+TGG - chr4_2:48356044-48356063 None:intergenic 50.0%
CCATTTCTGTGCCATACCCT+TGG + chr4_2:48356041-48356060 Msa0603690:intron 50.0%
!! TGGGCTGGTCATTAGACAGA+TGG + chr4_2:48356160-48356179 Msa0603690:intron 50.0%
GGGGTCTCAATGCAGTCATA+GGG + chr4_2:48356394-48356413 Msa0603690:intron 50.0%
!! TGGGACTCTGGGTTTTTGGA+GGG + chr4_2:48356593-48356612 Msa0603690:CDS 50.0%
AGCTGTACTCCTCATCTCAG+GGG + chr4_2:48356657-48356676 Msa0603690:CDS 50.0%
!! AAACCACGTGAGAGTATCCC+AGG - chr4_2:48356719-48356738 None:intergenic 50.0%
! GTTTGCTGCCCTCATTGCAA+TGG + chr4_2:48356735-48356754 Msa0603690:CDS 50.0%
TTGCCTGCATCTGTTCTCTG+GGG + chr4_2:48356900-48356919 Msa0603690:intron 50.0%
TTACCCCAGAGAACAGATGC+AGG - chr4_2:48356906-48356925 None:intergenic 50.0%
! ACATGCTCCAGTGGTTGGTT+TGG - chr4_2:48356989-48357008 None:intergenic 50.0%
GCTTGTGCTGTGTGTTCTCT+TGG + chr4_2:48357099-48357118 Msa0603690:intron 50.0%
ACCAATATGAGCAGCTCCAC+TGG - chr4_2:48357574-48357593 None:intergenic 50.0%
CTGGGAACTCCACCATTCTT+CGG + chr4_2:48357630-48357649 Msa0603690:CDS 50.0%
AACACCATGGCTCCGAAGAA+TGG - chr4_2:48357645-48357664 None:intergenic 50.0%
GGAGAGGAATGACAACACCA+TGG - chr4_2:48357658-48357677 None:intergenic 50.0%
TTCCTCTCCAACCTTATGGG+TGG + chr4_2:48357669-48357688 Msa0603690:CDS 50.0%
AGTAAGGCCACCCATAAGGT+TGG - chr4_2:48357679-48357698 None:intergenic 50.0%
GTTCCACTTGCCAAATGGTG+GGG + chr4_2:48357744-48357763 Msa0603690:CDS 50.0%
TAACCCCACCATTTGGCAAG+TGG - chr4_2:48357750-48357769 None:intergenic 50.0%
! CTTGCCAAATGGTGGGGTTA+TGG + chr4_2:48357750-48357769 Msa0603690:CDS 50.0%
!! TTGTCATCTGGCTTGGACTC+GGG + chr4_2:48357796-48357815 Msa0603690:CDS 50.0%
TTGGACTCGGGTCTATTTGG+TGG + chr4_2:48357808-48357827 Msa0603690:CDS 50.0%
! GTTGGTGAGGAATTGGTGGC+TGG - chr4_2:48354485-48354504 None:intergenic 55.0%
TGGAATGGACGGTGGAGGTT+GGG - chr4_2:48354530-48354549 None:intergenic 55.0%
TTGGAATGGACGGTGGAGGT+TGG - chr4_2:48354531-48354550 None:intergenic 55.0%
! GGATTTGGAATGGACGGTGG+AGG - chr4_2:48354535-48354554 None:intergenic 55.0%
GTGCCGTGAGAGTGAAGTTG+AGG - chr4_2:48354611-48354630 None:intergenic 55.0%
CCCAATCACCACCACCACTA+TGG + chr4_2:48354636-48354655 Msa0603690:exon 55.0%
!! GCCATAGTGGTGGTGGTGAT+TGG - chr4_2:48354640-48354659 None:intergenic 55.0%
! GGTTGTGGTGGTGAGAGGAA+TGG - chr4_2:48354665-48354684 None:intergenic 55.0%
GAAATGTTGGCGGAGAGGTG+GGG - chr4_2:48354725-48354744 None:intergenic 55.0%
GGAAATGTTGGCGGAGAGGT+GGG - chr4_2:48354726-48354745 None:intergenic 55.0%
TGGAAATGTTGGCGGAGAGG+TGG - chr4_2:48354727-48354746 None:intergenic 55.0%
!! GCTGGTGATGGAGATGAAGC+TGG - chr4_2:48354874-48354893 None:intergenic 55.0%
TGGTTCGTTCCAACCCCTGA+AGG + chr4_2:48354970-48354989 Msa0603690:CDS 55.0%
GAGTAGTTGCCATGCGTTGC+GGG - chr4_2:48355001-48355020 None:intergenic 55.0%
CGAGTAGTTGCCATGCGTTG+CGG - chr4_2:48355002-48355021 None:intergenic 55.0%
GTTAGCTCCGGCGATTCCTT+CGG + chr4_2:48355305-48355324 Msa0603690:CDS 55.0%
GATTCCTTCGGTTTCCGCGA+GGG + chr4_2:48355317-48355336 Msa0603690:CDS 55.0%
AAATATCCCACCAGCCCTCG+CGG - chr4_2:48355334-48355353 None:intergenic 55.0%
GATGGGACTGAGGAGAAGCT+TGG + chr4_2:48355402-48355421 Msa0603690:CDS 55.0%
! CGATTGGTCAGACGATTGGG+TGG + chr4_2:48355529-48355548 Msa0603690:CDS 55.0%
AGACGATTGGGTGGGTGGAT+TGG + chr4_2:48355538-48355557 Msa0603690:CDS 55.0%
! GACGATTGGGTGGGTGGATT+GGG + chr4_2:48355539-48355558 Msa0603690:CDS 55.0%
!! GTGGGTGGATTGGGCTAAAG+CGG + chr4_2:48355548-48355567 Msa0603690:CDS 55.0%
GGCTAAAGCGGCTATTGTGC+CGG + chr4_2:48355560-48355579 Msa0603690:CDS 55.0%
GCTAAAGCGGCTATTGTGCC+GGG + chr4_2:48355561-48355580 Msa0603690:CDS 55.0%
! TGTGCCGGGTTTGGTTTCGT+TGG + chr4_2:48355575-48355594 Msa0603690:CDS 55.0%
CTAGCAAGCTTAGGCGCATC+AGG - chr4_2:48355654-48355673 None:intergenic 55.0%
! CTGATGCGCCTAAGCTTGCT+AGG + chr4_2:48355652-48355671 Msa0603690:CDS 55.0%
! TTGTGATGGGGTGAGTGGCA+CGG - chr4_2:48356011-48356030 None:intergenic 55.0%
ATGGATGATGCGGTCACGGT+CGG + chr4_2:48356373-48356392 Msa0603690:intron 55.0%
CGGGGTCTCAATGCAGTCAT+AGG + chr4_2:48356393-48356412 Msa0603690:intron 55.0%
CAAAAACCCAGAGTCCCACC+TGG - chr4_2:48356591-48356610 None:intergenic 55.0%
! CAGGTGGGACTCTGGGTTTT+TGG + chr4_2:48356589-48356608 Msa0603690:intron 55.0%
!! GTGGGACTCTGGGTTTTTGG+AGG + chr4_2:48356592-48356611 Msa0603690:CDS 55.0%
GCCGTAACTGCTGCCATTCT+TGG + chr4_2:48356631-48356650 Msa0603690:CDS 55.0%
!! CTTAGCTGAGGGTGTTGCCT+GGG + chr4_2:48356699-48356718 Msa0603690:CDS 55.0%
TTGCCTGGGATACTCTCACG+TGG + chr4_2:48356713-48356732 Msa0603690:CDS 55.0%
GTACCCGGCCATTGCAATGA+GGG - chr4_2:48356746-48356765 None:intergenic 55.0%
AGTACCCGGCCATTGCAATG+AGG - chr4_2:48356747-48356766 None:intergenic 55.0%
GCCAGTGGAGCTGCTCATAT+TGG + chr4_2:48357570-48357589 Msa0603690:CDS 55.0%
TTTGTCCGTCGCTACTGCTC+TGG + chr4_2:48357611-48357630 Msa0603690:CDS 55.0%
TTGTCCGTCGCTACTGCTCT+GGG + chr4_2:48357612-48357631 Msa0603690:CDS 55.0%
AGTTCCCAGAGCAGTAGCGA+CGG - chr4_2:48357619-48357638 None:intergenic 55.0%
TCCACCATTCTTCGGAGCCA+TGG + chr4_2:48357638-48357657 Msa0603690:CDS 55.0%
ACCATGGCTCCGAAGAATGG+TGG - chr4_2:48357642-48357661 None:intergenic 55.0%
GGCTTGGACTCGGGTCTATT+TGG + chr4_2:48357805-48357824 Msa0603690:CDS 55.0%
!! GGTGGAAAGCCATTGGCTTG+TGG + chr4_2:48357826-48357845 Msa0603690:CDS 55.0%
GGCCCTTTACCACAAGCCAA+TGG - chr4_2:48357838-48357857 None:intergenic 55.0%
AACGATCAGCAGCGGTATCC+AGG - chr4_2:48358011-48358030 None:intergenic 55.0%
TGGACGGTGGAGGTTGGGAT+TGG - chr4_2:48354525-48354544 None:intergenic 60.0%
GTTAGTGGCGGTGGTTGTGG+TGG - chr4_2:48354677-48354696 None:intergenic 60.0%
GAGGTTAGTGGCGGTGGTTG+TGG - chr4_2:48354680-48354699 None:intergenic 60.0%
GAGGAAGGGGAGGTTAGTGG+CGG - chr4_2:48354689-48354708 None:intergenic 60.0%
TGCCATGGTTGAGCTGGTGG+CGG - chr4_2:48354898-48354917 None:intergenic 60.0%
CCTTGCCATGGTTGAGCTGG+TGG - chr4_2:48354901-48354920 None:intergenic 60.0%
CCACCAGCTCAACCATGGCA+AGG + chr4_2:48354898-48354917 Msa0603690:CDS 60.0%
TTAATGGCGGCGCCTTGCCA+TGG - chr4_2:48354913-48354932 None:intergenic 60.0%
GTTGCGGGATACGCCTTCAG+GGG - chr4_2:48354986-48355005 None:intergenic 60.0%
CGTTGCGGGATACGCCTTCA+GGG - chr4_2:48354987-48355006 None:intergenic 60.0%
AAGGCGTATCCCGCAACGCA+TGG + chr4_2:48354989-48355008 Msa0603690:CDS 60.0%
! GAATTGCGACAGCGCCGAGT+GGG - chr4_2:48355068-48355087 None:intergenic 60.0%
! AGAATTGCGACAGCGCCGAG+TGG - chr4_2:48355069-48355088 None:intergenic 60.0%
CTCGGCGCTGTCGCAATTCT+AGG + chr4_2:48355069-48355088 Msa0603690:CDS 60.0%
GCGGAAACCGAAGGAATCGC+CGG - chr4_2:48355315-48355334 None:intergenic 60.0%
CGATTCCTTCGGTTTCCGCG+AGG + chr4_2:48355316-48355335 Msa0603690:CDS 60.0%
TGGTCAGACGATTGGGTGGG+TGG + chr4_2:48355533-48355552 Msa0603690:CDS 60.0%
AGCGGCTATTGTGCCGGGTT+TGG + chr4_2:48355566-48355585 Msa0603690:CDS 60.0%
! TGTGATGGGGTGAGTGGCAC+GGG - chr4_2:48356010-48356029 None:intergenic 60.0%
TGGATGATGCGGTCACGGTC+GGG + chr4_2:48356374-48356393 Msa0603690:intron 60.0%
!! GCTTAGCTGAGGGTGTTGCC+TGG + chr4_2:48356698-48356717 Msa0603690:CDS 60.0%
GCTGCCCTCATTGCAATGGC+CGG + chr4_2:48356739-48356758 Msa0603690:CDS 60.0%
CTGCCCTCATTGCAATGGCC+GGG + chr4_2:48356740-48356759 Msa0603690:CDS 60.0%
GGCCACCCATAAGGTTGGAG+AGG - chr4_2:48357674-48357693 None:intergenic 60.0%
! GCGGTGGTTGTGGTGGTGAG+AGG - chr4_2:48354670-48354689 None:intergenic 65.0%
GAAGGGGAGGTTAGTGGCGG+TGG - chr4_2:48354686-48354705 None:intergenic 65.0%
GCGGAGGAAGGGGAGGTTAG+TGG - chr4_2:48354692-48354711 None:intergenic 65.0%
AGGAACGGAGGCGGAGGAAG+GGG - chr4_2:48354702-48354721 None:intergenic 65.0%
GAGGAACGGAGGCGGAGGAA+GGG - chr4_2:48354703-48354722 None:intergenic 65.0%
ATGTTGGCGGAGAGGTGGGG+AGG - chr4_2:48354722-48354741 None:intergenic 65.0%
CACCGCCACCAGCTCAACCA+TGG + chr4_2:48354893-48354912 Msa0603690:CDS 65.0%
GCGCCTTGCCATGGTTGAGC+TGG - chr4_2:48354904-48354923 None:intergenic 65.0%
CGGGATACGCCTTCAGGGGT+TGG - chr4_2:48354982-48355001 None:intergenic 65.0%
GCGTTGCGGGATACGCCTTC+AGG - chr4_2:48354988-48355007 None:intergenic 65.0%
! GTGATGGGGTGAGTGGCACG+GGG - chr4_2:48356009-48356028 None:intergenic 65.0%
GGATGATGCGGTCACGGTCG+GGG + chr4_2:48356375-48356394 Msa0603690:intron 65.0%
AACGGAGGCGGAGGAAGGGG+AGG - chr4_2:48354699-48354718 None:intergenic 70.0%
GGAGGAACGGAGGCGGAGGA+AGG - chr4_2:48354704-48354723 None:intergenic 70.0%
GAGGTGGGGAGGAACGGAGG+CGG - chr4_2:48354711-48354730 None:intergenic 70.0%
GGAGAGGTGGGGAGGAACGG+AGG - chr4_2:48354714-48354733 None:intergenic 70.0%
GGCGGAGAGGTGGGGAGGAA+CGG - chr4_2:48354717-48354736 None:intergenic 70.0%
!! GCTGGTGGCGGTGCTGGTGA+TGG - chr4_2:48354886-48354905 None:intergenic 70.0%
!! GGTTGAGCTGGTGGCGGTGC+TGG - chr4_2:48354892-48354911 None:intergenic 70.0%
CCAGCCCTCGCGGAAACCGA+AGG - chr4_2:48355324-48355343 None:intergenic 70.0%
CCTTCGGTTTCCGCGAGGGC+TGG + chr4_2:48355321-48355340 Msa0603690:CDS 70.0%
TCGGTTTCCGCGAGGGCTGG+TGG + chr4_2:48355324-48355343 Msa0603690:CDS 70.0%
! CGGTTTCCGCGAGGGCTGGT+GGG + chr4_2:48355325-48355344 Msa0603690:CDS 70.0%
GTGGGGAGGAACGGAGGCGG+AGG - chr4_2:48354708-48354727 None:intergenic 75.0%
! GCGACAGCGCCGAGTGGGAG+TGG - chr4_2:48355063-48355082 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 48354381 48358217 48354381 ID=Msa0603690;Name=Msa0603690
chr4_2 mRNA 48354381 48358217 48354381 ID=Msa0603690-mRNA-1;Parent=Msa0603690;Name=Msa0603690-mRNA-1;_AED=0.00;_eAED=0.00;_QI=274|1|1|1|1|1|3|366|557
chr4_2 exon 48354381 48355743 48354381 ID=Msa0603690-mRNA-1:exon:11113;Parent=Msa0603690-mRNA-1
chr4_2 exon 48356592 48356813 48356592 ID=Msa0603690-mRNA-1:exon:11114;Parent=Msa0603690-mRNA-1
chr4_2 exon 48357489 48358217 48357489 ID=Msa0603690-mRNA-1:exon:11115;Parent=Msa0603690-mRNA-1
chr4_2 five_prime_UTR 48354381 48354654 48354381 ID=Msa0603690-mRNA-1:five_prime_utr;Parent=Msa0603690-mRNA-1
chr4_2 CDS 48354655 48355743 48354655 ID=Msa0603690-mRNA-1:cds;Parent=Msa0603690-mRNA-1
chr4_2 CDS 48356592 48356813 48356592 ID=Msa0603690-mRNA-1:cds;Parent=Msa0603690-mRNA-1
chr4_2 CDS 48357489 48357851 48357489 ID=Msa0603690-mRNA-1:cds;Parent=Msa0603690-mRNA-1
chr4_2 three_prime_UTR 48357852 48358217 48357852 ID=Msa0603690-mRNA-1:three_prime_utr;Parent=Msa0603690-mRNA-1
Gene Sequence

>Msa0603690

ATGGCTTCCATTCCTCTCACCACCACAACCACCGCCACTAACCTCCCCTTCCTCCGCCTCCGTTCCTCCCCACCTCTCCGCCAACATTTCCAATCCACCTCCACTTTCAACTTCAAGCCCCTCAAATCAATTCACACACCCCCCATTTCCATTTTCTCACCCCTCATTTCAAAACGCCACTCTCTCACCGTTAAAGCTTCATCAGCCTCAATCACACCAGCTTCATCTCCATCACCAGCACCGCCACCAGCTCAACCATGGCAAGGCGCCGCCATTAAACCACTCATAGCATCAATCCTCACCGGAGTAATACTCTGGTTCGTTCCAACCCCTGAAGGCGTATCCCGCAACGCATGGCAACTACTCGCAATCTTCCTCGGAACTATCGTCGGAATCATCACACAACCACTCCCACTCGGCGCTGTCGCAATTCTAGGTTTAGGAGTTTCAGTTCTCACCAAAACCCTACCCTTTGTTGCAGCATTTTCCGGTTTCGGTGATCCAATTCCATGGTTGATTTGTTTAGCTTTTTTCTTTGCTAAAGGTTTTATCAAAACTGGATTAGGTAACCGTGTTGCGTATCAATTTGTGAAGCTTTTTGGTAGTTCTTCGTTAGGGTTAGGTTATAGTTTGGTTTTTAGTGAAGCATTGTTAGCTCCGGCGATTCCTTCGGTTTCCGCGAGGGCTGGTGGGATATTTTTACCGTTGGTTAAGTCTCTTTGTGTTGCTTGTGGAAGTAATGTTGGTGATGGGACTGAGGAGAAGCTTGGATCTTGGTTGATGCTTACTTGTTTTCAGACTTCTTGTATTTCATCGGCCATGTTTTTGACTGCGATGGCTGCGAATCCGTTATGTGCTACTCTTACTTTGAATTCGATTGGTCAGACGATTGGGTGGGTGGATTGGGCTAAAGCGGCTATTGTGCCGGGTTTGGTTTCGTTGGTTTTGGTGCCGTTGATTTTGTATATTATTTATCCTCCGACGTTGAAATCTAGTCCTGATGCGCCTAAGCTTGCTAGGGAGAAGTTGGAGAAAATGGGGCCTATGACGACTAATGAGAAAATTATGACCGCTACTCTGTTTCTTACGGTGGGACTCTGGGTTTTTGGAGGGCTTCTTAATATAGATGCCGTAACTGCTGCCATTCTTGGATTAGCTGTACTCCTCATCTCAGGGGTTGTAACATGGAAAGAGTGCTTAGCTGAGGGTGTTGCCTGGGATACTCTCACGTGGTTTGCTGCCCTCATTGCAATGGCCGGGTACTTGAACAAATATGGTCTCATCTCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGATTGGGTCTTTCATGGCAACTATCTTTTGGTATACTGGTCCTCCTCTACTTCTACTCTCATTACTTCTTTGCCAGTGGAGCTGCTCATATTGGTGCTATGTTTACTGCATTTTTGTCCGTCGCTACTGCTCTGGGAACTCCACCATTCTTCGGAGCCATGGTGTTGTCATTCCTCTCCAACCTTATGGGTGGCCTTACTCATTATGGGATTGGGTCAGCTCCAGTATTTTTCGGTGCCAACTATGTTCCACTTGCCAAATGGTGGGGTTATGGCTTTGTTATTAGTATTGTTAACATTGTCATCTGGCTTGGACTCGGGTCTATTTGGTGGAAAGCCATTGGCTTGTGGTAA
Protein sequence

>Msa0603690

MASIPLTTTTTATNLPFLRLRSSPPLRQHFQSTSTFNFKPLKSIHTPPISIFSPLISKRHSLTVKASSASITPASSPSPAPPPAQPWQGAAIKPLIASILTGVILWFVPTPEGVSRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLPFVAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTEEKLGSWLMLTCFQTSCISSAMFLTAMAANPLCATLTLNSIGQTIGWVDWAKAAIVPGLVSLVLVPLILYIIYPPTLKSSPDAPKLAREKLEKMGPMTTNEKIMTATLFLTVGLWVFGGLLNIDAVTAAILGLAVLLISGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFVISIVNIVIWLGLGSIWWKAIGLW*