AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1317290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1317290 MtrunA17_Chr8g0347531 99.125 343 2 1 1 342 1 343 0.0 694
Msa1317290 MtrunA17_Chr3g0101841 68.165 267 85 0 76 342 127 393 7.45e-134 386
Msa1317290 MtrunA17_Chr5g0446271 56.294 286 90 2 61 342 69 323 1.53e-108 320
Msa1317290 MtrunA17_Chr5g0406711 56.723 238 103 0 76 313 55 292 1.57e-97 292
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1317290 AT5G56760.1 86.194 268 36 1 76 342 45 312 1.48e-169 474
Msa1317290 AT1G55920.1 60.294 272 108 0 71 342 43 314 2.42e-121 352
Msa1317290 AT3G13110.1 61.798 267 102 0 76 342 125 391 6.72e-119 348
Msa1317290 AT4G35640.1 57.588 257 104 1 76 332 73 324 1.26e-95 288
Msa1317290 AT2G17640.1 55.253 257 110 1 76 332 36 287 2.08e-89 271

Find 154 sgRNAs with CRISPR-Local

Find 239 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTGCGGGTGCTACCATTC+TGG 0.182551 8_4:+18497720 Msa1317290:CDS
AAGAGGGATAGATGAGTTTA+AGG 0.200008 8_4:+18498423 Msa1317290:three_prime_UTR
TATTATTATACTTAAATTAC+AGG 0.257274 8_4:-18498106 None:intergenic
TGTGGAAAAGAAAAGTTATA+TGG 0.276298 8_4:-18495563 None:intergenic
CAAGGGATTTCTTGCTTGTC+AGG 0.306102 8_4:+18496131 Msa1317290:CDS
GATGTTTGGTTTGAGAATTT+TGG 0.326235 8_4:-18495530 None:intergenic
TTCTGGGTAATATTAAGATT+GGG 0.334846 8_4:+18497737 Msa1317290:CDS
GTAATTTAAGTATAATAATA+AGG 0.337907 8_4:+18498109 Msa1317290:three_prime_UTR
TGAGTTTAAGGTTCTGTCTA+TGG 0.342706 8_4:+18498435 Msa1317290:three_prime_UTR
TCGCAAAAGCGTTAAGAAAA+AGG 0.349769 8_4:-18496011 None:intergenic
GGATTGTGGTGGTTTGTTGT+GGG 0.350580 8_4:-18495720 None:intergenic
ATGGAATGGTATAGGATGTT+TGG 0.358392 8_4:-18495544 None:intergenic
TTCCGCGTCGCGGCGTGCTT+CGG 0.365005 8_4:-18495860 None:intergenic
ATTCTGGGTAATATTAAGAT+TGG 0.368505 8_4:+18497736 Msa1317290:CDS
ATCAGACCACTCAGAGATAA+AGG 0.371873 8_4:-18497908 None:intergenic
CAGGTTCGGAATACAGAAAC+TGG 0.376392 8_4:+18498221 Msa1317290:three_prime_UTR
ATTGAGCGATGTATTAAAAC+AGG 0.377703 8_4:+18498202 Msa1317290:three_prime_UTR
CGGATTGTGGTGGTTTGTTG+TGG 0.379801 8_4:-18495721 None:intergenic
GAGCACCCCATCTCCAATCT+TGG 0.387961 8_4:-18497695 None:intergenic
GGTTGGTAACCCGGCGAGAT+TGG 0.391387 8_4:+18497822 Msa1317290:CDS
TATCATCAGAGCTATCTTGC+AGG 0.393180 8_4:+18498345 Msa1317290:three_prime_UTR
GTCGTTGGTGCCTCCGACGA+AGG 0.394214 8_4:+18495814 Msa1317290:CDS
GGTGGGACTGGAAAGGTTGG+TGG 0.399723 8_4:+18497661 Msa1317290:CDS
TTGGTGGTTGCCGCCTTTGG+TGG 0.399778 8_4:-18495781 None:intergenic
GGGGTGAGAAATTGGAATGG+TGG 0.403081 8_4:-18495699 None:intergenic
TTGTTGGTGGTTGCCGCCTT+TGG 0.404175 8_4:-18495784 None:intergenic
TGGTGGTTGCCGCCTTTGGT+GGG 0.412889 8_4:-18495780 None:intergenic
CGTTCACTTTCGTTTCATCT+TGG 0.416739 8_4:+18495943 Msa1317290:CDS
CATGTAACACTGGGTGGGAC+TGG 0.419239 8_4:+18497649 Msa1317290:CDS
GGTGCGGGTGCTACCATTCT+GGG 0.419338 8_4:+18497721 Msa1317290:CDS
TCTCAGCTTGAGGATGTGCC+CGG 0.426819 8_4:+18497865 Msa1317290:CDS
GTGGGTGAGACGGCGGTGAT+TGG 0.428760 8_4:+18497604 Msa1317290:CDS
GATGGGGTGCTCATTGGTGC+GGG 0.434437 8_4:+18497706 Msa1317290:CDS
TTGATTATGTTACTAGGACT+TGG 0.434511 8_4:+18498249 Msa1317290:three_prime_UTR
ATAGTGATGAGGTTCTTATA+TGG 0.436564 8_4:-18495658 None:intergenic
CCTTTGCCAATCCTCGCTGC+CGG 0.437728 8_4:-18497550 None:intergenic
TTGGTGCCTCCGACGAAGGC+TGG 0.437791 8_4:+18495818 Msa1317290:CDS
GGGGATCGGCATCCCAAGAT+TGG 0.448675 8_4:+18497682 Msa1317290:CDS
TGAAATCAAACACTTGATGT+TGG 0.450383 8_4:+18497962 Msa1317290:three_prime_UTR
AAAGTTATATGGAATGGTAT+AGG 0.453300 8_4:-18495552 None:intergenic
CAGTCCCACCCAGTGTTACA+TGG 0.453460 8_4:-18497648 None:intergenic
ATGAAATTTGCAACATTTGT+GGG 0.458043 8_4:-18495609 None:intergenic
GTCGAGCCTGCCTCCACAAT+AGG 0.458416 8_4:-18497468 None:intergenic
ATTGTGGTGGTTTGTTGTGG+GGG 0.462797 8_4:-18495718 None:intergenic
AGCACCCCATCTCCAATCTT+GGG 0.465916 8_4:-18497694 None:intergenic
ATTGGGGAAGGCGCTAAGAT+TGG 0.467802 8_4:+18497754 Msa1317290:CDS
CTTTGCCAATCCTCGCTGCC+GGG 0.470723 8_4:-18497549 None:intergenic
GACCACTGCGGTTGGTAACC+CGG 0.471995 8_4:+18497813 Msa1317290:CDS
GGCGAGATTGGTTGGTGGTA+AGG 0.473968 8_4:+18497834 Msa1317290:CDS
TAGAGGTAGCTTGCTAGGGC+TGG 0.476706 8_4:-18495889 None:intergenic
ACTCAGAGATAAAGGAAGTA+TGG 0.477194 8_4:-18497900 None:intergenic
GTGGGACTGGAAAGGTTGGT+GGG 0.479022 8_4:+18497662 Msa1317290:CDS
TTGAGTAGAGGTAGCTTGCT+AGG 0.480386 8_4:-18495894 None:intergenic
GGCGCACCTATTGTGGAGGC+AGG 0.481206 8_4:+18497462 Msa1317290:CDS
CTGGAAAGGTTGGTGGGGAT+CGG 0.483329 8_4:+18497668 Msa1317290:CDS
TATTGTGTGTGCTATTATTG+TGG 0.484331 8_4:-18495581 None:intergenic
GATTGTGGTGGTTTGTTGTG+GGG 0.486264 8_4:-18495719 None:intergenic
GGGTGAGAAATTGGAATGGT+GGG 0.486923 8_4:-18495698 None:intergenic
TCACTGTTTGCTTAATTACA+AGG 0.488533 8_4:+18496113 Msa1317290:CDS
GAAGGCGCTAAGATTGGTGC+CGG 0.488591 8_4:+18497760 Msa1317290:CDS
GGATGTGCCCGGGGAGTCCA+TGG 0.491417 8_4:+18497876 Msa1317290:CDS
CGGCATCCCAAGATTGGAGA+TGG 0.491967 8_4:+18497688 Msa1317290:CDS
CTCAGCTTGAGGATGTGCCC+GGG 0.494227 8_4:+18497866 Msa1317290:CDS
CCTCCGACGAAGGCTGGCTA+TGG 0.494886 8_4:+18495824 Msa1317290:CDS
AGGGGTAGTGGTGGGTGAGA+CGG 0.497668 8_4:+18497594 Msa1317290:CDS
TGACCACGCCACAGGGGTAG+TGG 0.497766 8_4:+18497582 Msa1317290:CDS
AATCTTAATATTACCCAGAA+TGG 0.498470 8_4:-18497734 None:intergenic
GTTCGCCGGTCGGCATTGAT+CGG 0.499229 8_4:-18495744 None:intergenic
ATCATCAGAGCTATCTTGCA+GGG 0.499687 8_4:+18498346 Msa1317290:three_prime_UTR
CATGAAATTTGCAACATTTG+TGG 0.500983 8_4:-18495610 None:intergenic
ACCAACGACGGCGGAGTTGT+TGG 0.501003 8_4:-18495800 None:intergenic
CGGCAGCGAGGATTGGCAAA+GGG 0.505970 8_4:+18497551 Msa1317290:CDS
GCGATGTATTAAAACAGGTT+CGG 0.506545 8_4:+18498207 Msa1317290:three_prime_UTR
CACCCAGTGTTACATGGTGC+AGG 0.509289 8_4:-18497642 None:intergenic
TGGGACTGGAAAGGTTGGTG+GGG 0.516350 8_4:+18497663 Msa1317290:CDS
CACTTGATGTTGGATTTGCA+CGG 0.521321 8_4:+18497972 Msa1317290:three_prime_UTR
ATTGGAGATGGGGTGCTCAT+TGG 0.522662 8_4:+18497700 Msa1317290:CDS
GGTGGTTGCCGCCTTTGGTG+GGG 0.527306 8_4:-18495779 None:intergenic
GGTGAGAAATTGGAATGGTG+GGG 0.529441 8_4:-18495697 None:intergenic
CGGCATTGATCGGCGGATTG+TGG 0.530373 8_4:-18495734 None:intergenic
AGATGGGGTGCTCATTGGTG+CGG 0.531704 8_4:+18497705 Msa1317290:CDS
GAGAGAGAATCGTTGAGTAG+AGG 0.532015 8_4:-18495906 None:intergenic
AGTATGGTCCATGGACTCCC+CGG 0.532177 8_4:-18497884 None:intergenic
TTATATCATTTAAATTTCCA+AGG 0.532753 8_4:+18497930 Msa1317290:exon
AACGACGGCGGAGTTGTTGG+TGG 0.533628 8_4:-18495797 None:intergenic
CACTGTTTGCTTAATTACAA+GGG 0.534624 8_4:+18496114 Msa1317290:CDS
CCACGCCACAGGGGTAGTGG+TGG 0.535874 8_4:+18497585 Msa1317290:CDS
GGTAACCCGGCGAGATTGGT+TGG 0.536148 8_4:+18497826 Msa1317290:CDS
AAAAGAAAAGTTATATGGAA+TGG 0.545737 8_4:-18495558 None:intergenic
TTCTGTCTATGGTGAGAGAT+CGG 0.546182 8_4:+18498446 Msa1317290:three_prime_UTR
CATTGATCGGCGGATTGTGG+TGG 0.553944 8_4:-18495731 None:intergenic
GAATGTAGTGCTAGTGCTAA+CGG 0.555892 8_4:-18497493 None:intergenic
CTGGGTGGGACTGGAAAGGT+TGG 0.561509 8_4:+18497658 Msa1317290:CDS
ACCAACAACTCCGCCGTCGT+TGG 0.561683 8_4:+18495799 Msa1317290:CDS
TGAGTAGAGGTAGCTTGCTA+GGG 0.564115 8_4:-18495893 None:intergenic
TTACCACCAACCAATCTCGC+CGG 0.567372 8_4:-18497832 None:intergenic
GGCATCCCAAGATTGGAGAT+GGG 0.569442 8_4:+18497689 Msa1317290:CDS
CTTTCTTGTGATGTTTCAAG+AGG 0.570248 8_4:+18498406 Msa1317290:three_prime_UTR
GGCACATCCTCAAGCTGAGA+CGG 0.571158 8_4:-18497862 None:intergenic
TACCACCAACCAATCTCGCC+GGG 0.571788 8_4:-18497831 None:intergenic
GGTAATATTAAGATTGGGGA+AGG 0.571875 8_4:+18497742 Msa1317290:CDS
TGAGAGTAAGAGATACAAGC+AGG 0.576379 8_4:-18496093 None:intergenic
AGCCGAAGCACGCCGCGACG+CGG 0.578947 8_4:+18495858 Msa1317290:CDS
GGTAGTGGTGGGTGAGACGG+CGG 0.579689 8_4:+18497597 Msa1317290:CDS
GATAAAGGAAGTATGGTCCA+TGG 0.580589 8_4:-18497893 None:intergenic
TCGCGTCGCTGATGTATTCG+CGG 0.580907 8_4:+18497516 Msa1317290:CDS
CCGGCAGCGAGGATTGGCAA+AGG 0.581850 8_4:+18497550 Msa1317290:CDS
TGACCATAGCCAGCCTTCGT+CGG 0.583200 8_4:-18495827 None:intergenic
TCTGGGTAATATTAAGATTG+GGG 0.583983 8_4:+18497738 Msa1317290:CDS
GGATAGTGTCCATGGATGGA+TGG 0.586329 8_4:-18495458 None:intergenic
ATCCGCCGATCAATGCCGAC+CGG 0.588986 8_4:+18495739 Msa1317290:CDS
GGCAGCGAGGATTGGCAAAG+GGG 0.592605 8_4:+18497552 Msa1317290:CDS
ACCGTGTGGCGCACCTATTG+TGG 0.593859 8_4:+18497455 Msa1317290:CDS
GTATGGTCCATGGACTCCCC+GGG 0.595665 8_4:-18497883 None:intergenic
GTGTAGTGAAGTTCGCCGGT+CGG 0.597964 8_4:-18495754 None:intergenic
TGCACCATGTAACACTGGGT+GGG 0.599409 8_4:+18497644 Msa1317290:CDS
TTACCAACCGCAGTGGTCCG+TGG 0.600628 8_4:-18497808 None:intergenic
ATACTTCCTTTATCTCTGAG+TGG 0.602441 8_4:+18497902 Msa1317290:CDS
CACGCCACAGGGGTAGTGGT+GGG 0.603461 8_4:+18497586 Msa1317290:CDS
GGAGACGCCGTCTCAGCTTG+AGG 0.611463 8_4:+18497855 Msa1317290:CDS
GATCCTGCACCATGTAACAC+TGG 0.613273 8_4:+18497639 Msa1317290:CDS
ATCAATCAAAACAACAGACC+CGG 0.615476 8_4:-18497779 None:intergenic
CCATAGCCAGCCTTCGTCGG+AGG 0.616322 8_4:-18495824 None:intergenic
AAGGCGCTAAGATTGGTGCC+GGG 0.618996 8_4:+18497761 Msa1317290:CDS
TCAGCTTGAGGATGTGCCCG+GGG 0.621469 8_4:+18497867 Msa1317290:CDS
ATCCTGCACCATGTAACACT+GGG 0.622092 8_4:+18497640 Msa1317290:CDS
GGTTGTGTAGTGAAGTTCGC+CGG 0.624046 8_4:-18495758 None:intergenic
CCACCACTACCCCTGTGGCG+TGG 0.624777 8_4:-18497585 None:intergenic
AAGTGAGTGTGATAGTGATG+AGG 0.625574 8_4:-18495669 None:intergenic
ATATAATAGCCATCCATCCA+TGG 0.627250 8_4:+18495449 None:intergenic
GTGTGGCGCACCTATTGTGG+AGG 0.628062 8_4:+18497458 Msa1317290:CDS
ATTATTGCAGGCGCACCGTG+TGG 0.628755 8_4:+18497441 Msa1317290:intron
ATTATTATACTTAAATTACA+GGG 0.629842 8_4:-18498105 None:intergenic
GCATCCCAAGATTGGAGATG+GGG 0.630033 8_4:+18497690 Msa1317290:CDS
AACCCGGCGAGATTGGTTGG+TGG 0.633827 8_4:+18497829 Msa1317290:CDS
TTTCTTGTGATGTTTCAAGA+GGG 0.635093 8_4:+18498407 Msa1317290:three_prime_UTR
TCACTACACAACCCCACCAA+AGG 0.636171 8_4:+18495768 Msa1317290:CDS
TCCACAATAGGTGCGCCACA+CGG 0.638193 8_4:-18497456 None:intergenic
TTCGTCGGAGGCACCAACGA+CGG 0.648676 8_4:-18495812 None:intergenic
TCATCAGAGCTATCTTGCAG+GGG 0.648830 8_4:+18498347 Msa1317290:three_prime_UTR
CTCACCCACCACTACCCCTG+TGG 0.654422 8_4:-18497590 None:intergenic
AACACTGGGTGGGACTGGAA+AGG 0.656173 8_4:+18497654 Msa1317290:CDS
GTCGGAGGCACCAACGACGG+CGG 0.657793 8_4:-18495809 None:intergenic
CTGGTTCCGATTCCGCGTCG+CGG 0.660178 8_4:-18495870 None:intergenic
CTGCACCATGTAACACTGGG+TGG 0.667916 8_4:+18497643 Msa1317290:CDS
TGGATATTCACCCGGCAGCG+AGG 0.671097 8_4:+18497539 Msa1317290:CDS
ATAACATGACATCATAATCG+TGG 0.672350 8_4:+18498290 Msa1317290:three_prime_UTR
CTACACAACCCCACCAAAGG+CGG 0.680128 8_4:+18495771 Msa1317290:CDS
ATTCGCGGTGGATATTCACC+CGG 0.681804 8_4:+18497531 Msa1317290:CDS
ACAGCAGCAGAACTTAGCGA+CGG 0.696865 8_4:-18496039 None:intergenic
TAACTGTACTGCATTATGAG+TGG 0.699951 8_4:+18498169 Msa1317290:three_prime_UTR
CCAACCGCAGTGGTCCGTGG+CGG 0.720060 8_4:-18497805 None:intergenic
TTTGTTTGACCACGCCACAG+GGG 0.787151 8_4:+18497576 Msa1317290:CDS
TGTGCCGCCACGGACCACTG+CGG 0.789172 8_4:+18497801 Msa1317290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATTTTGAAAGTAATTA+AGG + chr8_4:18496248-18496267 Msa1317290:intron 10.0%
!!! TATATTTTGAAAGTAATTAA+GGG + chr8_4:18496249-18496268 Msa1317290:intron 10.0%
!! ATTATTATACTTAAATTACA+GGG - chr8_4:18498108-18498127 None:intergenic 10.0%
!! TATTATTATACTTAAATTAC+AGG - chr8_4:18498109-18498128 None:intergenic 10.0%
!! GTAATTTAAGTATAATAATA+AGG + chr8_4:18498109-18498128 Msa1317290:three_prime_UTR 10.0%
!!! GTTAAAAAAGAAAAGAATTT+TGG - chr8_4:18495482-18495501 None:intergenic 15.0%
!! CTGAACTATTAAAAAAAATA+GGG - chr8_4:18497080-18497099 None:intergenic 15.0%
!! TCTGAACTATTAAAAAAAAT+AGG - chr8_4:18497081-18497100 None:intergenic 15.0%
!! AAAACCAAATTGAAAAATTA+GGG - chr8_4:18497295-18497314 None:intergenic 15.0%
!! AAAAACCAAATTGAAAAATT+AGG - chr8_4:18497296-18497315 None:intergenic 15.0%
!! TTATATCATTTAAATTTCCA+AGG + chr8_4:18497930-18497949 Msa1317290:exon 15.0%
!! AAAAGAAAAGTTATATGGAA+TGG - chr8_4:18495561-18495580 None:intergenic 20.0%
!!! GTTTTTATAAATGCTATAAG+CGG + chr8_4:18496770-18496789 Msa1317290:intron 20.0%
!! AATCCTAATTCTTAAATTTC+AGG + chr8_4:18497171-18497190 Msa1317290:intron 20.0%
!! ATCCTAATTCTTAAATTTCA+GGG + chr8_4:18497172-18497191 Msa1317290:intron 20.0%
!!! AAAACCCTAATTTTTCAATT+TGG + chr8_4:18497288-18497307 Msa1317290:intron 20.0%
!!! AAACTCTAATTTTCAATTTC+AGG + chr8_4:18497332-18497351 Msa1317290:intron 20.0%
!!! AACTCTAATTTTCAATTTCA+GGG + chr8_4:18497333-18497352 Msa1317290:intron 20.0%
! AAAGTTATATGGAATGGTAT+AGG - chr8_4:18495555-18495574 None:intergenic 25.0%
! TGTGGAAAAGAAAAGTTATA+TGG - chr8_4:18495566-18495585 None:intergenic 25.0%
! ATGAAATTTGCAACATTTGT+GGG - chr8_4:18495612-18495631 None:intergenic 25.0%
! AAAGTTGAATAATTAGGGTT+TGG - chr8_4:18496199-18496218 None:intergenic 25.0%
! AAACCCTAATTATTCAACTT+TGG + chr8_4:18496198-18496217 Msa1317290:intron 25.0%
! AACCCTAATTATTCAACTTT+GGG + chr8_4:18496199-18496218 Msa1317290:intron 25.0%
! TAATTAAGGGACTAATTTGA+TGG + chr8_4:18496262-18496281 Msa1317290:intron 25.0%
! AAAGAATAACACAATCTAAG+CGG - chr8_4:18496329-18496348 None:intergenic 25.0%
! TATTATTCATAAGCTTATCG+AGG - chr8_4:18496467-18496486 None:intergenic 25.0%
! AAAAATAAGCCAATCCAAAT+GGG + chr8_4:18496530-18496549 Msa1317290:intron 25.0%
! ACATAATTGCATATCATGAT+AGG - chr8_4:18496700-18496719 None:intergenic 25.0%
!! TTTATCATTTGCTACAGAAA+TGG - chr8_4:18496738-18496757 None:intergenic 25.0%
! TTAAAAAAAATAGGGCTGTT+TGG - chr8_4:18497072-18497091 None:intergenic 25.0%
! TAGTTTAGAGACTAAATTGA+AGG + chr8_4:18497123-18497142 Msa1317290:intron 25.0%
! AACCCTGAAATTTAAGAATT+AGG - chr8_4:18497177-18497196 None:intergenic 25.0%
! AATCCTGATTCTTCAAATTT+AGG + chr8_4:18497210-18497229 Msa1317290:intron 25.0%
! ATCCTGATTCTTCAAATTTA+GGG + chr8_4:18497211-18497230 Msa1317290:intron 25.0%
! AACCTGAAATTTATGAATCA+GGG - chr8_4:18497256-18497275 None:intergenic 25.0%
! AAACCTGAAATTTATGAATC+AGG - chr8_4:18497257-18497276 None:intergenic 25.0%
!! ACTCTAATTTTCAATTTCAG+GGG + chr8_4:18497334-18497353 Msa1317290:intron 25.0%
! TTAAAAAAAACCACACAAGT+TGG - chr8_4:18497395-18497414 None:intergenic 25.0%
!!! ACTTGTGTGGTTTTTTTTAA+TGG + chr8_4:18497395-18497414 Msa1317290:intron 25.0%
! AATCTTAATATTACCCAGAA+TGG - chr8_4:18497737-18497756 None:intergenic 25.0%
! ATTCTGGGTAATATTAAGAT+TGG + chr8_4:18497736-18497755 Msa1317290:CDS 25.0%
! TTCTGGGTAATATTAAGATT+GGG + chr8_4:18497737-18497756 Msa1317290:CDS 25.0%
!!! GAACCAAATTTTTGTTTTGA+TGG + chr8_4:18498000-18498019 Msa1317290:three_prime_UTR 25.0%
! AGACCATCAAAACAAAAATT+TGG - chr8_4:18498006-18498025 None:intergenic 25.0%
!!! GTTTTGTTGATTATGTTACT+AGG + chr8_4:18498243-18498262 Msa1317290:three_prime_UTR 25.0%
! GTTTGAGAATTTTGGATGTA+TGG - chr8_4:18495525-18495544 None:intergenic 30.0%
!!! GATGTTTGGTTTGAGAATTT+TGG - chr8_4:18495533-18495552 None:intergenic 30.0%
! TATTGTGTGTGCTATTATTG+TGG - chr8_4:18495584-18495603 None:intergenic 30.0%
CATGAAATTTGCAACATTTG+TGG - chr8_4:18495613-18495632 None:intergenic 30.0%
ATAGTGATGAGGTTCTTATA+TGG - chr8_4:18495661-18495680 None:intergenic 30.0%
TCACTGTTTGCTTAATTACA+AGG + chr8_4:18496113-18496132 Msa1317290:CDS 30.0%
CACTGTTTGCTTAATTACAA+GGG + chr8_4:18496114-18496133 Msa1317290:CDS 30.0%
ACCCTAATTATTCAACTTTG+GGG + chr8_4:18496200-18496219 Msa1317290:intron 30.0%
AAGAATAACACAATCTAAGC+GGG - chr8_4:18496328-18496347 None:intergenic 30.0%
CAAAAATAAGCCAATCCAAA+TGG + chr8_4:18496529-18496548 Msa1317290:intron 30.0%
ATAGCTTATACAAAGCAGTT+TGG - chr8_4:18496629-18496648 None:intergenic 30.0%
!! AGCTATAAGCTGTTTTCATA+TGG + chr8_4:18496643-18496662 Msa1317290:intron 30.0%
! CTTATGTACATAAGCTTTGT+TGG - chr8_4:18496959-18496978 None:intergenic 30.0%
GCATATTTGAGCTTATCAAT+TGG - chr8_4:18497045-18497064 None:intergenic 30.0%
AATAGTTCAGAGACTAGATA+TGG + chr8_4:18497090-18497109 Msa1317290:intron 30.0%
ATAGTTCAGAGACTAGATAT+GGG + chr8_4:18497091-18497110 Msa1317290:intron 30.0%
AGACTAAATTGAAGGTTTGT+TGG + chr8_4:18497131-18497150 Msa1317290:intron 30.0%
AACCCTAAATTTGAAGAATC+AGG - chr8_4:18497216-18497235 None:intergenic 30.0%
AACCCTGATTCATAAATTTC+AGG + chr8_4:18497251-18497270 Msa1317290:intron 30.0%
! CAAGTTGGAATTGAAGAATA+AGG - chr8_4:18497380-18497399 None:intergenic 30.0%
TCTGGGTAATATTAAGATTG+GGG + chr8_4:18497738-18497757 Msa1317290:CDS 30.0%
! TGATTTCAAGAATTTTGCCT+TGG - chr8_4:18497950-18497969 None:intergenic 30.0%
TGAAATCAAACACTTGATGT+TGG + chr8_4:18497962-18497981 Msa1317290:three_prime_UTR 30.0%
ATTGAGCGATGTATTAAAAC+AGG + chr8_4:18498202-18498221 Msa1317290:three_prime_UTR 30.0%
TTGATTATGTTACTAGGACT+TGG + chr8_4:18498249-18498268 Msa1317290:three_prime_UTR 30.0%
ATAACATGACATCATAATCG+TGG + chr8_4:18498290-18498309 Msa1317290:three_prime_UTR 30.0%
TTTCTTGTGATGTTTCAAGA+GGG + chr8_4:18498407-18498426 Msa1317290:three_prime_UTR 30.0%
! AGAATTTTGGATAGTGTCCA+TGG - chr8_4:18495469-18495488 None:intergenic 35.0%
ATGGAATGGTATAGGATGTT+TGG - chr8_4:18495547-18495566 None:intergenic 35.0%
!! TCGCAAAAGCGTTAAGAAAA+AGG - chr8_4:18496014-18496033 None:intergenic 35.0%
CCCCCAAAGTTGAATAATTA+GGG - chr8_4:18496204-18496223 None:intergenic 35.0%
CCCTAATTATTCAACTTTGG+GGG + chr8_4:18496201-18496220 Msa1317290:intron 35.0%
ACCCCCAAAGTTGAATAATT+AGG - chr8_4:18496205-18496224 None:intergenic 35.0%
GAACAGAATATGACACTGTT+TGG + chr8_4:18496290-18496309 Msa1317290:intron 35.0%
AGAATATGACACTGTTTGGT+TGG + chr8_4:18496294-18496313 Msa1317290:intron 35.0%
ACACTGTTTGGTTGGATAAA+GGG + chr8_4:18496302-18496321 Msa1317290:intron 35.0%
AGCTGCAAAATAAGCTCTTT+GGG - chr8_4:18496556-18496575 None:intergenic 35.0%
AAGCTGCAAAATAAGCTCTT+TGG - chr8_4:18496557-18496576 None:intergenic 35.0%
!!! GAGCTTATTTTGCAGCTTAT+AGG + chr8_4:18496559-18496578 Msa1317290:intron 35.0%
!! CTATAAGCTGTTTTCCAAAC+AGG - chr8_4:18496669-18496688 None:intergenic 35.0%
CTACAGAAATGGCTTATGTA+AGG - chr8_4:18496727-18496746 None:intergenic 35.0%
GCATAAGTTGTGAAACTGTT+TGG - chr8_4:18496889-18496908 None:intergenic 35.0%
TCAAATGAGTCTATCCAAAC+AGG + chr8_4:18496921-18496940 Msa1317290:intron 35.0%
TTCTTCAATTCCAACTTGTG+TGG + chr8_4:18497382-18497401 Msa1317290:intron 35.0%
ACTGTACTTGTGATTATTGC+AGG + chr8_4:18497429-18497448 Msa1317290:intron 35.0%
GGTAATATTAAGATTGGGGA+AGG + chr8_4:18497742-18497761 Msa1317290:CDS 35.0%
ATCAATCAAAACAACAGACC+CGG - chr8_4:18497782-18497801 None:intergenic 35.0%
ACTCAGAGATAAAGGAAGTA+TGG - chr8_4:18497903-18497922 None:intergenic 35.0%
ATACTTCCTTTATCTCTGAG+TGG + chr8_4:18497902-18497921 Msa1317290:CDS 35.0%
TAACTGTACTGCATTATGAG+TGG + chr8_4:18498169-18498188 Msa1317290:three_prime_UTR 35.0%
GCGATGTATTAAAACAGGTT+CGG + chr8_4:18498207-18498226 Msa1317290:three_prime_UTR 35.0%
CTTTCTTGTGATGTTTCAAG+AGG + chr8_4:18498406-18498425 Msa1317290:three_prime_UTR 35.0%
AAGAGGGATAGATGAGTTTA+AGG + chr8_4:18498423-18498442 Msa1317290:three_prime_UTR 35.0%
! TGAGTTTAAGGTTCTGTCTA+TGG + chr8_4:18498435-18498454 Msa1317290:three_prime_UTR 35.0%
! TTTTGGATAGTGTCCATGGA+TGG - chr8_4:18495465-18495484 None:intergenic 40.0%
! AAGTGAGTGTGATAGTGATG+AGG - chr8_4:18495672-18495691 None:intergenic 40.0%
CGTTCACTTTCGTTTCATCT+TGG + chr8_4:18495943-18495962 Msa1317290:CDS 40.0%
TGAGAGTAAGAGATACAAGC+AGG - chr8_4:18496096-18496115 None:intergenic 40.0%
GACACTGTTTGGTTGGATAA+AGG + chr8_4:18496301-18496320 Msa1317290:intron 40.0%
! CTGTTTTCATATGGCCTGTT+TGG + chr8_4:18496652-18496671 Msa1317290:intron 40.0%
! GCGGTTTTCATAAGCTATCT+TGG + chr8_4:18496789-18496808 Msa1317290:intron 40.0%
ACTCATTTGAGCTTGTCAAC+TGG - chr8_4:18496911-18496930 None:intergenic 40.0%
AAAAATAGGGCTGTTTGGCT+TGG - chr8_4:18497067-18497086 None:intergenic 40.0%
GAATGTAGTGCTAGTGCTAA+CGG - chr8_4:18497496-18497515 None:intergenic 40.0%
! GATAAAGGAAGTATGGTCCA+TGG - chr8_4:18497896-18497915 None:intergenic 40.0%
ATCAGACCACTCAGAGATAA+AGG - chr8_4:18497911-18497930 None:intergenic 40.0%
CACTTGATGTTGGATTTGCA+CGG + chr8_4:18497972-18497991 Msa1317290:three_prime_UTR 40.0%
TATCATCAGAGCTATCTTGC+AGG + chr8_4:18498345-18498364 Msa1317290:three_prime_UTR 40.0%
ATCATCAGAGCTATCTTGCA+GGG + chr8_4:18498346-18498365 Msa1317290:three_prime_UTR 40.0%
TTCTGTCTATGGTGAGAGAT+CGG + chr8_4:18498446-18498465 Msa1317290:three_prime_UTR 40.0%
GGTGAGAAATTGGAATGGTG+GGG - chr8_4:18495700-18495719 None:intergenic 45.0%
GGGTGAGAAATTGGAATGGT+GGG - chr8_4:18495701-18495720 None:intergenic 45.0%
TTGTTGTGGGGGTGAGAAAT+TGG - chr8_4:18495710-18495729 None:intergenic 45.0%
!! ATTGTGGTGGTTTGTTGTGG+GGG - chr8_4:18495721-18495740 None:intergenic 45.0%
!! GATTGTGGTGGTTTGTTGTG+GGG - chr8_4:18495722-18495741 None:intergenic 45.0%
!! GGATTGTGGTGGTTTGTTGT+GGG - chr8_4:18495723-18495742 None:intergenic 45.0%
!! TGAGTAGAGGTAGCTTGCTA+GGG - chr8_4:18495896-18495915 None:intergenic 45.0%
!! TTGAGTAGAGGTAGCTTGCT+AGG - chr8_4:18495897-18495916 None:intergenic 45.0%
GAGAGAGAATCGTTGAGTAG+AGG - chr8_4:18495909-18495928 None:intergenic 45.0%
CAAGGGATTTCTTGCTTGTC+AGG + chr8_4:18496131-18496150 Msa1317290:CDS 45.0%
ATAAGCTCTTTGGGCCCATT+TGG - chr8_4:18496547-18496566 None:intergenic 45.0%
GGATAGTTTACGAGCCTGTT+TGG - chr8_4:18496938-18496957 None:intergenic 45.0%
!! TTTTGTTTGACCACGCCACA+GGG + chr8_4:18497575-18497594 Msa1317290:CDS 45.0%
ATCCTGCACCATGTAACACT+GGG + chr8_4:18497640-18497659 Msa1317290:CDS 45.0%
!! TTTTGATTGATGTGCCGCCA+CGG + chr8_4:18497791-18497810 Msa1317290:CDS 45.0%
CAGGTTCGGAATACAGAAAC+TGG + chr8_4:18498221-18498240 Msa1317290:three_prime_UTR 45.0%
TCATCAGAGCTATCTTGCAG+GGG + chr8_4:18498347-18498366 Msa1317290:three_prime_UTR 45.0%
GGATAGTGTCCATGGATGGA+TGG - chr8_4:18495461-18495480 None:intergenic 50.0%
GGGGTGAGAAATTGGAATGG+TGG - chr8_4:18495702-18495721 None:intergenic 50.0%
GTGGGGGTGAGAAATTGGAA+TGG - chr8_4:18495705-18495724 None:intergenic 50.0%
!! CGGATTGTGGTGGTTTGTTG+TGG - chr8_4:18495724-18495743 None:intergenic 50.0%
GGTTGTGTAGTGAAGTTCGC+CGG - chr8_4:18495761-18495780 None:intergenic 50.0%
TCACTACACAACCCCACCAA+AGG + chr8_4:18495768-18495787 Msa1317290:CDS 50.0%
ACAGCAGCAGAACTTAGCGA+CGG - chr8_4:18496042-18496061 None:intergenic 50.0%
CTCTTTGGGCCCATTTGGAT+TGG - chr8_4:18496542-18496561 None:intergenic 50.0%
ATTCGCGGTGGATATTCACC+CGG + chr8_4:18497531-18497550 Msa1317290:CDS 50.0%
!!! GTTTTGTTTGACCACGCCAC+AGG + chr8_4:18497574-18497593 Msa1317290:CDS 50.0%
TTTGTTTGACCACGCCACAG+GGG + chr8_4:18497576-18497595 Msa1317290:CDS 50.0%
GATCCTGCACCATGTAACAC+TGG + chr8_4:18497639-18497658 Msa1317290:CDS 50.0%
TGCACCATGTAACACTGGGT+GGG + chr8_4:18497644-18497663 Msa1317290:CDS 50.0%
GGCATCCCAAGATTGGAGAT+GGG + chr8_4:18497689-18497708 Msa1317290:CDS 50.0%
GCATCCCAAGATTGGAGATG+GGG + chr8_4:18497690-18497709 Msa1317290:CDS 50.0%
AGCACCCCATCTCCAATCTT+GGG - chr8_4:18497697-18497716 None:intergenic 50.0%
! ATTGGAGATGGGGTGCTCAT+TGG + chr8_4:18497700-18497719 Msa1317290:CDS 50.0%
!! ATTGGGGAAGGCGCTAAGAT+TGG + chr8_4:18497754-18497773 Msa1317290:CDS 50.0%
TTACCACCAACCAATCTCGC+CGG - chr8_4:18497835-18497854 None:intergenic 50.0%
!! CATTGATCGGCGGATTGTGG+TGG - chr8_4:18495734-18495753 None:intergenic 55.0%
GTGTAGTGAAGTTCGCCGGT+CGG - chr8_4:18495757-18495776 None:intergenic 55.0%
CTACACAACCCCACCAAAGG+CGG + chr8_4:18495771-18495790 Msa1317290:CDS 55.0%
!! TTGTTGGTGGTTGCCGCCTT+TGG - chr8_4:18495787-18495806 None:intergenic 55.0%
TGACCATAGCCAGCCTTCGT+CGG - chr8_4:18495830-18495849 None:intergenic 55.0%
!! TAGAGGTAGCTTGCTAGGGC+TGG - chr8_4:18495892-18495911 None:intergenic 55.0%
ATTATTGCAGGCGCACCGTG+TGG + chr8_4:18497441-18497460 Msa1317290:intron 55.0%
TCCACAATAGGTGCGCCACA+CGG - chr8_4:18497459-18497478 None:intergenic 55.0%
TCGCGTCGCTGATGTATTCG+CGG + chr8_4:18497516-18497535 Msa1317290:CDS 55.0%
CACCCAGTGTTACATGGTGC+AGG - chr8_4:18497645-18497664 None:intergenic 55.0%
CTGCACCATGTAACACTGGG+TGG + chr8_4:18497643-18497662 Msa1317290:CDS 55.0%
CAGTCCCACCCAGTGTTACA+TGG - chr8_4:18497651-18497670 None:intergenic 55.0%
CATGTAACACTGGGTGGGAC+TGG + chr8_4:18497649-18497668 Msa1317290:CDS 55.0%
AACACTGGGTGGGACTGGAA+AGG + chr8_4:18497654-18497673 Msa1317290:CDS 55.0%
! GTGGGACTGGAAAGGTTGGT+GGG + chr8_4:18497662-18497681 Msa1317290:CDS 55.0%
!! TGGGACTGGAAAGGTTGGTG+GGG + chr8_4:18497663-18497682 Msa1317290:CDS 55.0%
!! CTGGAAAGGTTGGTGGGGAT+CGG + chr8_4:18497668-18497687 Msa1317290:CDS 55.0%
CGGCATCCCAAGATTGGAGA+TGG + chr8_4:18497688-18497707 Msa1317290:CDS 55.0%
GAGCACCCCATCTCCAATCT+TGG - chr8_4:18497698-18497717 None:intergenic 55.0%
! AGATGGGGTGCTCATTGGTG+CGG + chr8_4:18497705-18497724 Msa1317290:CDS 55.0%
!! GAAGGCGCTAAGATTGGTGC+CGG + chr8_4:18497760-18497779 Msa1317290:CDS 55.0%
! AAGGCGCTAAGATTGGTGCC+GGG + chr8_4:18497761-18497780 Msa1317290:CDS 55.0%
TACCACCAACCAATCTCGCC+GGG - chr8_4:18497834-18497853 None:intergenic 55.0%
!! GGCGAGATTGGTTGGTGGTA+AGG + chr8_4:18497834-18497853 Msa1317290:CDS 55.0%
GGCACATCCTCAAGCTGAGA+CGG - chr8_4:18497865-18497884 None:intergenic 55.0%
TCTCAGCTTGAGGATGTGCC+CGG + chr8_4:18497865-18497884 Msa1317290:CDS 55.0%
AGTATGGTCCATGGACTCCC+CGG - chr8_4:18497887-18497906 None:intergenic 55.0%
!! CGGCATTGATCGGCGGATTG+TGG - chr8_4:18495737-18495756 None:intergenic 60.0%
ATCCGCCGATCAATGCCGAC+CGG + chr8_4:18495739-18495758 Msa1317290:CDS 60.0%
!! GTTCGCCGGTCGGCATTGAT+CGG - chr8_4:18495747-18495766 None:intergenic 60.0%
TGGTGGTTGCCGCCTTTGGT+GGG - chr8_4:18495783-18495802 None:intergenic 60.0%
! TTGGTGGTTGCCGCCTTTGG+TGG - chr8_4:18495784-18495803 None:intergenic 60.0%
AACGACGGCGGAGTTGTTGG+TGG - chr8_4:18495800-18495819 None:intergenic 60.0%
ACCAACAACTCCGCCGTCGT+TGG + chr8_4:18495799-18495818 Msa1317290:CDS 60.0%
ACCAACGACGGCGGAGTTGT+TGG - chr8_4:18495803-18495822 None:intergenic 60.0%
!! TTCGTCGGAGGCACCAACGA+CGG - chr8_4:18495815-18495834 None:intergenic 60.0%
ACCGTGTGGCGCACCTATTG+TGG + chr8_4:18497455-18497474 Msa1317290:CDS 60.0%
GTGTGGCGCACCTATTGTGG+AGG + chr8_4:18497458-18497477 Msa1317290:CDS 60.0%
GTCGAGCCTGCCTCCACAAT+AGG - chr8_4:18497471-18497490 None:intergenic 60.0%
CGTCGCTGATGTATTCGCGG+TGG + chr8_4:18497519-18497538 Msa1317290:CDS 60.0%
TGGATATTCACCCGGCAGCG+AGG + chr8_4:18497539-18497558 Msa1317290:CDS 60.0%
ATTCACCCGGCAGCGAGGAT+TGG + chr8_4:18497544-18497563 Msa1317290:CDS 60.0%
CTTTGCCAATCCTCGCTGCC+GGG - chr8_4:18497552-18497571 None:intergenic 60.0%
CCTTTGCCAATCCTCGCTGC+CGG - chr8_4:18497553-18497572 None:intergenic 60.0%
! CGGCAGCGAGGATTGGCAAA+GGG + chr8_4:18497551-18497570 Msa1317290:CDS 60.0%
! GGCAGCGAGGATTGGCAAAG+GGG + chr8_4:18497552-18497571 Msa1317290:CDS 60.0%
!! AGGGGTAGTGGTGGGTGAGA+CGG + chr8_4:18497594-18497613 Msa1317290:CDS 60.0%
CTGGGTGGGACTGGAAAGGT+TGG + chr8_4:18497658-18497677 Msa1317290:CDS 60.0%
GGTGGGACTGGAAAGGTTGG+TGG + chr8_4:18497661-18497680 Msa1317290:CDS 60.0%
GGGGATCGGCATCCCAAGAT+TGG + chr8_4:18497682-18497701 Msa1317290:CDS 60.0%
! GATGGGGTGCTCATTGGTGC+GGG + chr8_4:18497706-18497725 Msa1317290:CDS 60.0%
! TGGTGCGGGTGCTACCATTC+TGG + chr8_4:18497720-18497739 Msa1317290:CDS 60.0%
! GGTGCGGGTGCTACCATTCT+GGG + chr8_4:18497721-18497740 Msa1317290:CDS 60.0%
TTACCAACCGCAGTGGTCCG+TGG - chr8_4:18497811-18497830 None:intergenic 60.0%
!! GACCACTGCGGTTGGTAACC+CGG + chr8_4:18497813-18497832 Msa1317290:CDS 60.0%
!! GGTTGGTAACCCGGCGAGAT+TGG + chr8_4:18497822-18497841 Msa1317290:CDS 60.0%
GGTAACCCGGCGAGATTGGT+TGG + chr8_4:18497826-18497845 Msa1317290:CDS 60.0%
! AACCCGGCGAGATTGGTTGG+TGG + chr8_4:18497829-18497848 Msa1317290:CDS 60.0%
CTCAGCTTGAGGATGTGCCC+GGG + chr8_4:18497866-18497885 Msa1317290:CDS 60.0%
TCAGCTTGAGGATGTGCCCG+GGG + chr8_4:18497867-18497886 Msa1317290:CDS 60.0%
GTATGGTCCATGGACTCCCC+GGG - chr8_4:18497886-18497905 None:intergenic 60.0%
GGTGGTTGCCGCCTTTGGTG+GGG - chr8_4:18495782-18495801 None:intergenic 65.0%
! GTCGTTGGTGCCTCCGACGA+AGG + chr8_4:18495814-18495833 Msa1317290:CDS 65.0%
! TTGGTGCCTCCGACGAAGGC+TGG + chr8_4:18495818-18495837 Msa1317290:CDS 65.0%
CCATAGCCAGCCTTCGTCGG+AGG - chr8_4:18495827-18495846 None:intergenic 65.0%
! CCTCCGACGAAGGCTGGCTA+TGG + chr8_4:18495824-18495843 Msa1317290:CDS 65.0%
CTGGTTCCGATTCCGCGTCG+CGG - chr8_4:18495873-18495892 None:intergenic 65.0%
GGCGCACCTATTGTGGAGGC+AGG + chr8_4:18497462-18497481 Msa1317290:CDS 65.0%
! CCGGCAGCGAGGATTGGCAA+AGG + chr8_4:18497550-18497569 Msa1317290:CDS 65.0%
TGACCACGCCACAGGGGTAG+TGG + chr8_4:18497582-18497601 Msa1317290:CDS 65.0%
! CACGCCACAGGGGTAGTGGT+GGG + chr8_4:18497586-18497605 Msa1317290:CDS 65.0%
CTCACCCACCACTACCCCTG+TGG - chr8_4:18497593-18497612 None:intergenic 65.0%
!! GGTAGTGGTGGGTGAGACGG+CGG + chr8_4:18497597-18497616 Msa1317290:CDS 65.0%
GTGGGTGAGACGGCGGTGAT+TGG + chr8_4:18497604-18497623 Msa1317290:CDS 65.0%
GGAGACGCCGTCTCAGCTTG+AGG + chr8_4:18497855-18497874 Msa1317290:CDS 65.0%
!! CGCCGGTCGGCATTGATCGG+CGG - chr8_4:18495744-18495763 None:intergenic 70.0%
!! GTCGGAGGCACCAACGACGG+CGG - chr8_4:18495812-18495831 None:intergenic 70.0%
TTCCGCGTCGCGGCGTGCTT+CGG - chr8_4:18495863-18495882 None:intergenic 70.0%
AGCACGCCGCGACGCGGAAT+CGG + chr8_4:18495864-18495883 Msa1317290:CDS 70.0%
CCACCACTACCCCTGTGGCG+TGG - chr8_4:18497588-18497607 None:intergenic 70.0%
! CCACGCCACAGGGGTAGTGG+TGG + chr8_4:18497585-18497604 Msa1317290:CDS 70.0%
TGTGCCGCCACGGACCACTG+CGG + chr8_4:18497801-18497820 Msa1317290:CDS 70.0%
CCAACCGCAGTGGTCCGTGG+CGG - chr8_4:18497808-18497827 None:intergenic 70.0%
CGCCGGGTTACCAACCGCAG+TGG - chr8_4:18497818-18497837 None:intergenic 70.0%
GGATGTGCCCGGGGAGTCCA+TGG + chr8_4:18497876-18497895 Msa1317290:CDS 70.0%
AGCCGAAGCACGCCGCGACG+CGG + chr8_4:18495858-18495877 Msa1317290:CDS 75.0%
CCGCCACGGACCACTGCGGT+TGG + chr8_4:18497805-18497824 Msa1317290:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 18495455 18498499 18495455 ID=Msa1317290;Name=Msa1317290
chr8_4 mRNA 18495455 18498499 18495455 ID=Msa1317290-mRNA-1;Parent=Msa1317290;Name=Msa1317290-mRNA-1;_AED=0.01;_eAED=0.01;_QI=161|1|1|1|1|1|2|557|342
chr8_4 exon 18495455 18496152 18495455 ID=Msa1317290-mRNA-1:exon:6817;Parent=Msa1317290-mRNA-1
chr8_4 exon 18497451 18498499 18497451 ID=Msa1317290-mRNA-1:exon:6818;Parent=Msa1317290-mRNA-1
chr8_4 five_prime_UTR 18495455 18495615 18495455 ID=Msa1317290-mRNA-1:five_prime_utr;Parent=Msa1317290-mRNA-1
chr8_4 CDS 18495616 18496152 18495616 ID=Msa1317290-mRNA-1:cds;Parent=Msa1317290-mRNA-1
chr8_4 CDS 18497451 18497942 18497451 ID=Msa1317290-mRNA-1:cds;Parent=Msa1317290-mRNA-1
chr8_4 three_prime_UTR 18497943 18498499 18497943 ID=Msa1317290-mRNA-1:three_prime_utr;Parent=Msa1317290-mRNA-1
Gene Sequence

>Msa1317290

ATGTTGCAAATTTCATGCAATTATTTACATGCAAAATTCAAACCATATAAGAACCTCATCACTATCACACTCACTTTCTCACCCCACCATTCCAATTTCTCACCCCCACAACAAACCACCACAATCCGCCGATCAATGCCGACCGGCGAACTTCACTACACAACCCCACCAAAGGCGGCAACCACCAACAACTCCGCCGTCGTTGGTGCCTCCGACGAAGGCTGGCTATGGTCACAAATCAAAGCCGAAGCACGCCGCGACGCGGAATCGGAACCAGCCCTAGCAAGCTACCTCTACTCAACGATTCTCTCTCACTCTTCACTCGAACGTTCACTTTCGTTTCATCTTGGTAACAAGCTTTGTTCTTCGACGCTTCTTTCGACGCTTCTTTATGACCTTTTTCTTAACGCTTTTGCGACTGATCCGTCGCTAAGTTCTGCTGCTGTTGCTGATCTTCGTGCTGCTCGTGAACGTGATCCTGCTTGTATCTCTTACTCTCACTGTTTGCTTAATTACAAGGGATTTCTTGCTTGTCAGGCGCACCGTGTGGCGCACCTATTGTGGAGGCAGGCTCGACAGCCGTTAGCACTAGCACTACATTCTCGCGTCGCTGATGTATTCGCGGTGGATATTCACCCGGCAGCGAGGATTGGCAAAGGGGTTTTGTTTGACCACGCCACAGGGGTAGTGGTGGGTGAGACGGCGGTGATTGGAAATAATGTGTCGATCCTGCACCATGTAACACTGGGTGGGACTGGAAAGGTTGGTGGGGATCGGCATCCCAAGATTGGAGATGGGGTGCTCATTGGTGCGGGTGCTACCATTCTGGGTAATATTAAGATTGGGGAAGGCGCTAAGATTGGTGCCGGGTCTGTTGTTTTGATTGATGTGCCGCCACGGACCACTGCGGTTGGTAACCCGGCGAGATTGGTTGGTGGTAAGGAGACGCCGTCTCAGCTTGAGGATGTGCCCGGGGAGTCCATGGACCATACTTCCTTTATCTCTGAGTGGTCTGATTATATCATTTAA
Protein sequence

>Msa1317290

MLQISCNYLHAKFKPYKNLITITLTFSPHHSNFSPPQQTTTIRRSMPTGELHYTTPPKAATTNNSAVVGASDEGWLWSQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNAFATDPSLSSAAVADLRAARERDPACISYSHCLLNYKGFLACQAHRVAHLLWRQARQPLALALHSRVADVFAVDIHPAARIGKGVLFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKETPSQLEDVPGESMDHTSFISEWSDYII*