AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1167150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167150 MtrunA17_Chr7g0267151 98.099 263 5 0 2 264 3 265 0.0 525
Msa1167150 MtrunA17_Chr1g0177361 83.883 273 29 6 1 264 1 267 1.05e-153 429
Msa1167150 MtrunA17_Chr4g0052651 31.111 180 114 3 73 247 6 180 6.68e-23 93.6
Msa1167150 MtrunA17_Chr4g0070091 30.994 171 102 5 59 228 66 221 4.15e-15 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167150 AT5G06290.1 90.741 216 18 2 50 264 59 273 5.35e-144 405
Msa1167150 AT3G11630.1 91.667 204 16 1 62 264 63 266 6.00e-140 394
Msa1167150 AT5G06290.2 87.845 181 20 2 50 229 59 238 2.55e-113 326
Msa1167150 AT1G48130.1 30.114 176 118 2 73 247 6 177 5.14e-23 94.0
Msa1167150 AT3G26060.3 34.194 155 90 4 74 227 10 153 1.16e-16 75.5
Msa1167150 AT3G26060.1 33.758 157 88 5 74 227 72 215 2.94e-16 75.9
Msa1167150 AT3G26060.2 33.758 157 88 5 74 227 73 216 3.25e-16 75.9

Find 104 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCGGTGTACACCTTGATTT+TGG 0.190910 7_4:+59437751 Msa1167150:three_prime_UTR
TTGCGCATCATAACTTAAAA+TGG 0.199343 7_4:-59437708 None:intergenic
GGGAGGGAAGTGCGTAGTTT+AGG 0.215883 7_4:-59433317 None:intergenic
AATAATACTTTCATTTATAA+TGG 0.234593 7_4:+59437836 Msa1167150:three_prime_UTR
GTTAAACTATCTGAATATAT+TGG 0.248804 7_4:+59434758 Msa1167150:CDS
TTGGGAGAGAAGAGGATGTT+AGG 0.252613 7_4:-59433236 None:intergenic
GGGAGAGAATTGGAGGAATT+GGG 0.258409 7_4:-59433296 None:intergenic
ATACTTTATCTCTCTATCTT+TGG 0.267768 7_4:+59433133 Msa1167150:five_prime_UTR
AGTACTCTTTGCTAAGTTTA+GGG 0.275142 7_4:-59437585 None:intergenic
AAGTACTCTTTGCTAAGTTT+AGG 0.277836 7_4:-59437586 None:intergenic
ATGTGGTGGAGAAGATAATT+TGG 0.278915 7_4:-59433255 None:intergenic
AGGGAGAGAATTGGAGGAAT+TGG 0.282783 7_4:-59433297 None:intergenic
GGAACTTAATACAGAGATAT+TGG 0.285595 7_4:+59434958 Msa1167150:CDS
GGAGGGAAGTGCGTAGTTTA+GGG 0.295279 7_4:-59433316 None:intergenic
GTATCGATTGGGGATGTAAA+AGG 0.296126 7_4:+59437663 Msa1167150:three_prime_UTR
AAGTTTAGGGTCTGGTTTCA+TGG 0.308012 7_4:-59437572 None:intergenic
CCCGATGAAGTTTGCCCTGC+TGG 0.308593 7_4:+59437529 Msa1167150:CDS
TGGGAGAGAAGAGGATGTTA+GGG 0.369953 7_4:-59433235 None:intergenic
TGCCCTGCTGGGTGGAAGCC+TGG 0.371090 7_4:+59437541 Msa1167150:CDS
TGTGGTGGAGAAGATAATTT+GGG 0.380711 7_4:-59433254 None:intergenic
AAATCCATATCAAAATCTTA+TGG 0.385045 7_4:+59436945 Msa1167150:CDS
TTCACATTTGTTTGCCCCAC+AGG 0.386111 7_4:+59434818 Msa1167150:CDS
TTAAACTATCTGAATATATT+GGG 0.386115 7_4:+59434759 Msa1167150:CDS
CCAGCAGGGCAAACTTCATC+GGG 0.387505 7_4:-59437529 None:intergenic
ACAGCCTCAGCTTCAAAATC+TGG 0.388070 7_4:-59434639 None:intergenic
TGTAGTTCTCGCACCTTGCA+TGG 0.388525 7_4:+59436856 Msa1167150:intron
GTGTCAAAATTTACCTGATC+AGG 0.391100 7_4:-59436978 None:intergenic
TGGTGTTCTCATTCCTGATC+AGG 0.396767 7_4:+59436965 Msa1167150:CDS
ACCATCAACAACCTCGGAAT+TGG 0.399693 7_4:+59437303 Msa1167150:CDS
GCGTAGTTTAGGGAGAGAAT+TGG 0.401138 7_4:-59433306 None:intergenic
ACAGATAAGAACAGAAGAAA+TGG 0.403614 7_4:-59437795 None:intergenic
AGAAGCAGATGGAGCTGAGC+AGG 0.404326 7_4:-59433198 None:intergenic
AGGAGCGGTTGAGGGAAAGA+GGG 0.413713 7_4:-59433337 None:intergenic
GGTTTCATGGACTTCTCACC+AGG 0.417997 7_4:-59437559 None:intergenic
TCACCAGGCTTCCACCCAGC+AGG 0.418832 7_4:-59437544 None:intergenic
GAGAAGAAGAGGAGCGGTTG+AGG 0.419127 7_4:-59433346 None:intergenic
GAGGAGCGGTTGAGGGAAAG+AGG 0.420689 7_4:-59433338 None:intergenic
TCTTTGCTAAGTTTAGGGTC+TGG 0.422181 7_4:-59437580 None:intergenic
ACTGCTCATCTGTATCGATT+GGG 0.429908 7_4:+59437652 Msa1167150:three_prime_UTR
ACCAATTCCGAGGTTGTTGA+TGG 0.432822 7_4:-59437304 None:intergenic
GACAGAAAGTCCGGTGGTCT+CGG 0.433149 7_4:+59436888 Msa1167150:CDS
AACTGCTCATCTGTATCGAT+TGG 0.445433 7_4:+59437651 Msa1167150:three_prime_UTR
GAACTTAATACAGAGATATT+GGG 0.451651 7_4:+59434959 Msa1167150:CDS
GGCGCAGCGTTCCCAACTAA+TGG 0.459593 7_4:-59434618 None:intergenic
AAGAGCGAACTACCATTAGT+TGG 0.460962 7_4:+59434606 Msa1167150:intron
TTTGGCTTCTTCTACCTCAC+AGG 0.463915 7_4:+59433151 Msa1167150:five_prime_UTR
CCCAGCAGGGCAAACTTCAT+CGG 0.471666 7_4:-59437530 None:intergenic
AGCGGTTGAGGGAAAGAGGG+AGG 0.482247 7_4:-59433334 None:intergenic
GGAGAGAATTGGAGGAATTG+GGG 0.485152 7_4:-59433295 None:intergenic
TGACCGCCATGCAGAATTTG+CGG 0.486264 7_4:+59434937 Msa1167150:CDS
GTGTTGTTATTAAAGCATAT+CGG 0.494699 7_4:+59437733 Msa1167150:three_prime_UTR
TGTTCATTATTGACAAGGAA+GGG 0.497591 7_4:+59437265 Msa1167150:CDS
ATGCTTCACCTCCACCCATT+CGG 0.501591 7_4:-59433059 None:intergenic
TTCTGTGATTTAAGTAAGCA+AGG 0.504638 7_4:+59437877 Msa1167150:three_prime_UTR
GCGGTTGAGGGAAAGAGGGA+GGG 0.507328 7_4:-59433333 None:intergenic
GAAACTGCGGCGAGAAGAAG+AGG 0.508647 7_4:-59433357 None:intergenic
CTTACTTAAATCACAGAACA+AGG 0.511073 7_4:-59437872 None:intergenic
AGAAGAAGAGGAGCGGTTGA+GGG 0.511653 7_4:-59433345 None:intergenic
GTAGTTCTCGCACCTTGCAT+GGG 0.512924 7_4:+59436857 Msa1167150:intron
CATAATTCACTCCAAAATCA+AGG 0.515253 7_4:-59437762 None:intergenic
AAACAAATGTGAAGTCCAAT+GGG 0.523515 7_4:-59434808 None:intergenic
TAGTTTAGGGAGAGAATTGG+AGG 0.527220 7_4:-59433303 None:intergenic
TTGTTCATTATTGACAAGGA+AGG 0.531673 7_4:+59437264 Msa1167150:CDS
AAGATAATTTGGGAGAGAAG+AGG 0.533309 7_4:-59433244 None:intergenic
AGAGCGAACTACCATTAGTT+GGG 0.537134 7_4:+59434607 Msa1167150:intron
CAAACAAATGTGAAGTCCAA+TGG 0.543653 7_4:-59434809 None:intergenic
GAGAGAGAAGAAAGATGTGG+TGG 0.544776 7_4:-59433269 None:intergenic
CCGATGAAGTTTGCCCTGCT+GGG 0.550218 7_4:+59437530 Msa1167150:CDS
GCAGGCCTTGCAATACGTGC+AGG 0.551362 7_4:+59437501 Msa1167150:intron
AGAATTGGAGGAATTGGGGA+TGG 0.555868 7_4:-59433291 None:intergenic
GTTCTCCTGCACGTATTGCA+AGG 0.557103 7_4:-59437506 None:intergenic
GTTCATTATTGACAAGGAAG+GGG 0.557158 7_4:+59437266 Msa1167150:CDS
AGGTGGGGTTGGAGCCTCTG+AGG 0.558608 7_4:+59433104 Msa1167150:five_prime_UTR
TGAGACAAAGAGAACACTCC+AGG 0.563249 7_4:+59437338 Msa1167150:CDS
GTTCAAACAGACAGAAAGTC+CGG 0.564704 7_4:+59436879 Msa1167150:CDS
GGTTGTTGATGGTAGAATGT+TGG 0.565020 7_4:-59437293 None:intergenic
TGAAATAGTGTCCGAATGGG+TGG 0.576276 7_4:+59433048 Msa1167150:five_prime_UTR
CACCAGGCTTCCACCCAGCA+GGG 0.584088 7_4:-59437543 None:intergenic
GAAGATAAGAGAGAAGCAGA+TGG 0.588346 7_4:-59433209 None:intergenic
TGTCTGTTTGAACCCATGCA+AGG 0.591033 7_4:-59436869 None:intergenic
CTGCTCATCTGTATCGATTG+GGG 0.599468 7_4:+59437653 Msa1167150:three_prime_UTR
ATTTAGGGGATAGCATTGAG+AGG 0.608578 7_4:+59437240 Msa1167150:intron
GTTCAAGTCACCGAGACCAC+CGG 0.609395 7_4:-59436898 None:intergenic
TCATCACACTCACTCAAACA+TGG 0.612785 7_4:+59433175 Msa1167150:exon
AACTTGAAATAGTGTCCGAA+TGG 0.617017 7_4:+59433044 Msa1167150:five_prime_UTR
ACTTGAAATAGTGTCCGAAT+GGG 0.618416 7_4:+59433045 Msa1167150:five_prime_UTR
CAACACTTCTACCAATTCCG+AGG 0.625459 7_4:-59437314 None:intergenic
TAAGTTCCGCAAATTCTGCA+TGG 0.626665 7_4:-59434943 None:intergenic
AGGATTGTTCATTATTGACA+AGG 0.639152 7_4:+59437260 Msa1167150:CDS
ATGGAGAGAGAAGAAAGATG+TGG 0.640784 7_4:-59433272 None:intergenic
CATTCTACCATCAACAACCT+CGG 0.642105 7_4:+59437297 Msa1167150:CDS
GGGTGTTTCAGTTGACAGTG+TGG 0.646005 7_4:+59434979 Msa1167150:CDS
TTGGTGACATCAGATACTAA+AGG 0.646692 7_4:-59436924 None:intergenic
AATAGTGTCCGAATGGGTGG+AGG 0.656627 7_4:+59433051 Msa1167150:five_prime_UTR
ATGAAGTTTGCCCTGCTGGG+TGG 0.658136 7_4:+59437533 Msa1167150:CDS
TTACTTAAATCACAGAACAA+GGG 0.660306 7_4:-59437871 None:intergenic
TAAAGTATATTATACCTCAG+AGG 0.685656 7_4:-59433118 None:intergenic
TGCGGCGAGAAGAAGAGGAG+CGG 0.686466 7_4:-59433352 None:intergenic
AAGCTTTAACGACGAAACTG+CGG 0.686884 7_4:-59433370 None:intergenic
GTTCCGCAAATTCTGCATGG+CGG 0.722852 7_4:-59434940 None:intergenic
GTGAGTGTGATGAGCCTGTG+AGG 0.729084 7_4:-59433165 None:intergenic
AAAGGGTCGACCAACCTGTG+GGG 0.742883 7_4:-59434832 None:intergenic
CAAACAGACAGAAAGTCCGG+TGG 0.767889 7_4:+59436882 Msa1167150:CDS
CAGCAGGGCAAACTTCATCG+GGG 0.776185 7_4:-59437528 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATATATACTAATCT+AGG + chr7_4:59435360-59435379 Msa1167150:intron 10.0%
!! TAAAGAAAATGTAAATAAAA+GGG - chr7_4:59435468-59435487 None:intergenic 10.0%
!! TATATATATATATATGAGTT+AGG - chr7_4:59436438-59436457 None:intergenic 10.0%
!!! TTTAATTTCAATATATTATC+TGG + chr7_4:59437059-59437078 Msa1167150:intron 10.0%
!! AATAATACTTTCATTTATAA+TGG + chr7_4:59437836-59437855 Msa1167150:three_prime_UTR 10.0%
!! TGAGTTTATAAAATTACTTT+CGG + chr7_4:59433513-59433532 Msa1167150:intron 15.0%
!!! ACTTTTTATAATGTAGTATA+AGG + chr7_4:59433664-59433683 Msa1167150:intron 15.0%
!!! CTTTTTATAATGTAGTATAA+GGG + chr7_4:59433665-59433684 Msa1167150:intron 15.0%
!!! TTTTTCAATTAAGAATACAT+GGG - chr7_4:59433868-59433887 None:intergenic 15.0%
!!! TTTTTTCAATTAAGAATACA+TGG - chr7_4:59433869-59433888 None:intergenic 15.0%
!! TTGAATAATTAAAAACAAGA+TGG + chr7_4:59434386-59434405 Msa1167150:intron 15.0%
!! TTAAACTATCTGAATATATT+GGG + chr7_4:59434759-59434778 Msa1167150:CDS 15.0%
!! AGGACTAATTATTAAAATTA+AGG - chr7_4:59435015-59435034 None:intergenic 15.0%
!! TCAATAAATTATAAATGTCT+GGG - chr7_4:59435069-59435088 None:intergenic 15.0%
!! ATCAATAAATTATAAATGTC+TGG - chr7_4:59435070-59435089 None:intergenic 15.0%
!! CTAAAGAAAATGTAAATAAA+AGG - chr7_4:59435469-59435488 None:intergenic 15.0%
!!! TTATTTATAAATTAGTTTGC+TGG - chr7_4:59435562-59435581 None:intergenic 15.0%
!! AATATGTATTATTATTGACA+TGG + chr7_4:59435992-59436011 Msa1167150:intron 15.0%
!! ATATGTATTATTATTGACAT+GGG + chr7_4:59435993-59436012 Msa1167150:intron 15.0%
!! TTAAATCTAATTAAGAAACA+TGG + chr7_4:59436044-59436063 Msa1167150:intron 15.0%
!! TAAATCTAATTAAGAAACAT+GGG + chr7_4:59436045-59436064 Msa1167150:intron 15.0%
!! ATTTATTCATTTCATTGTTA+AGG - chr7_4:59436337-59436356 None:intergenic 15.0%
!!! TTTTTTATTCCACTTTTTTT+CGG + chr7_4:59437186-59437205 Msa1167150:intron 15.0%
!!! TAACATCCATCTTATTTTTT+AGG + chr7_4:59433084-59433103 Msa1167150:five_prime_UTR 20.0%
!! AAGTTTCATTAAAATGAGTT+TGG + chr7_4:59433558-59433577 Msa1167150:intron 20.0%
!! TAAGCTATAAGCTAAAAAAT+TGG - chr7_4:59433705-59433724 None:intergenic 20.0%
!! ATATTTATAAGCTAGTACAA+CGG + chr7_4:59433928-59433947 Msa1167150:intron 20.0%
!!! CTATCTTTTACAAATTCAAT+CGG + chr7_4:59433959-59433978 Msa1167150:intron 20.0%
!! GTTAAACTATCTGAATATAT+TGG + chr7_4:59434758-59434777 Msa1167150:CDS 20.0%
!! TACAACTATAGTTTACTAAA+GGG - chr7_4:59434852-59434871 None:intergenic 20.0%
!! ATATAAGAGTTAACAATAGA+AGG - chr7_4:59435035-59435054 None:intergenic 20.0%
!! CAATAAATTATAAATGTCTG+GGG - chr7_4:59435068-59435087 None:intergenic 20.0%
!! ATTTATTGATATGACATTGT+TGG + chr7_4:59435080-59435099 Msa1167150:intron 20.0%
!! GTATATATAAAAAACGTGAA+GGG - chr7_4:59435354-59435373 None:intergenic 20.0%
!! AGTATATATAAAAAACGTGA+AGG - chr7_4:59435355-59435374 None:intergenic 20.0%
!! CATTAGATTAATTAAATGGA+TGG - chr7_4:59435715-59435734 None:intergenic 20.0%
!! CATCCATTTAATTAATCTAA+TGG + chr7_4:59435713-59435732 Msa1167150:intron 20.0%
!! ACACCATTAGATTAATTAAA+TGG - chr7_4:59435719-59435738 None:intergenic 20.0%
!! ATCAAATATTGAATTGATTG+TGG - chr7_4:59435958-59435977 None:intergenic 20.0%
!!! ATTTTAATTGAATCGAATAG+TGG - chr7_4:59436022-59436041 None:intergenic 20.0%
!!! TTTTTTTTGCTATGATCAAT+TGG + chr7_4:59436217-59436236 Msa1167150:intron 20.0%
!!! ATTCTTTGTTTTGATCTTAA+TGG - chr7_4:59436365-59436384 None:intergenic 20.0%
!! ATTAAGATCAAAACAAAGAA+TGG + chr7_4:59436364-59436383 Msa1167150:intron 20.0%
!!! ATTTTGACTTTCCATTATTT+AGG - chr7_4:59436622-59436641 None:intergenic 20.0%
!!! ATAAGATTTTGATATGGATT+TGG - chr7_4:59436946-59436965 None:intergenic 20.0%
!! AAATCCATATCAAAATCTTA+TGG + chr7_4:59436945-59436964 Msa1167150:CDS 20.0%
!!! TATTATCTGGAATGAAATAT+AGG + chr7_4:59437072-59437091 Msa1167150:intron 20.0%
!!! ATCCATCTTATTTTTTAGGT+GGG + chr7_4:59433088-59433107 Msa1167150:five_prime_UTR 25.0%
! TAAAGTATATTATACCTCAG+AGG - chr7_4:59433121-59433140 None:intergenic 25.0%
! ATACTTTATCTCTCTATCTT+TGG + chr7_4:59433133-59433152 Msa1167150:five_prime_UTR 25.0%
!! TGATACCATCTTAGAATTTT+AGG + chr7_4:59434187-59434206 Msa1167150:intron 25.0%
! AAGTTACAACAGTCAATAAT+TGG - chr7_4:59434499-59434518 None:intergenic 25.0%
! CTACAACTATAGTTTACTAA+AGG - chr7_4:59434853-59434872 None:intergenic 25.0%
! GAACTTAATACAGAGATATT+GGG + chr7_4:59434959-59434978 Msa1167150:CDS 25.0%
!!! TGAACACTCTTTATTTTCTT+CGG - chr7_4:59435203-59435222 None:intergenic 25.0%
!!! ATAAAGAGTGTTCAAAGATT+TGG + chr7_4:59435209-59435228 Msa1167150:intron 25.0%
! AAAATATGTAAGACAGTAAG+TGG - chr7_4:59435236-59435255 None:intergenic 25.0%
!!! GTTTTAAACTCAGTTTGTAT+AGG + chr7_4:59435507-59435526 Msa1167150:intron 25.0%
!!! AGAAAATTTTGGGGATAATT+AGG - chr7_4:59435809-59435828 None:intergenic 25.0%
! AAGTAGAATTGAGTAATTCA+TGG - chr7_4:59435861-59435880 None:intergenic 25.0%
! ATTCATTTCATTGTTAAGGT+GGG - chr7_4:59436333-59436352 None:intergenic 25.0%
! TATTCATTTCATTGTTAAGG+TGG - chr7_4:59436334-59436353 None:intergenic 25.0%
! AACTATTCTATTCTTCCATA+CGG - chr7_4:59436585-59436604 None:intergenic 25.0%
! TATGGAAGAATAGAATAGTT+TGG + chr7_4:59436585-59436604 Msa1167150:intron 25.0%
! ATGGAAGAATAGAATAGTTT+GGG + chr7_4:59436586-59436605 Msa1167150:intron 25.0%
!!! AACACCATAAGATTTTGATA+TGG - chr7_4:59436952-59436971 None:intergenic 25.0%
! CAAAAGACATTGAATTTGAT+AGG - chr7_4:59437036-59437055 None:intergenic 25.0%
! AAAAAACAGATGACTAAATG+TGG - chr7_4:59437406-59437425 None:intergenic 25.0%
! GTAGAACATAGAAAGATAAA+AGG - chr7_4:59437441-59437460 None:intergenic 25.0%
!! GTGTTGTTATTAAAGCATAT+CGG + chr7_4:59437733-59437752 Msa1167150:three_prime_UTR 25.0%
! TTACTTAAATCACAGAACAA+GGG - chr7_4:59437874-59437893 None:intergenic 25.0%
!!! CATCCATCTTATTTTTTAGG+TGG + chr7_4:59433087-59433106 Msa1167150:five_prime_UTR 30.0%
!!! TCCATCTTATTTTTTAGGTG+GGG + chr7_4:59433089-59433108 Msa1167150:five_prime_UTR 30.0%
!! TGAGCTTATGTGTTTTGTTA+TGG + chr7_4:59433422-59433441 Msa1167150:intron 30.0%
GCATCTATCAATTGATAAAC+TGG - chr7_4:59433474-59433493 None:intergenic 30.0%
CCAAACACTACAAATTCAAT+CGG + chr7_4:59433994-59434013 Msa1167150:intron 30.0%
TATACATCTTAGCCTCTATT+TGG - chr7_4:59434075-59434094 None:intergenic 30.0%
AAATAGAGGCTAAGATGTAT+AGG + chr7_4:59434074-59434093 Msa1167150:intron 30.0%
AATAGAGGCTAAGATGTATA+GGG + chr7_4:59434075-59434094 Msa1167150:intron 30.0%
CTAAGATGTATAGGGTAAAA+TGG + chr7_4:59434083-59434102 Msa1167150:intron 30.0%
TATTAGAGACATTGCTTTCA+TGG + chr7_4:59434118-59434137 Msa1167150:intron 30.0%
AGTCTATCCAAAGATTCATT+GGG - chr7_4:59434166-59434185 None:intergenic 30.0%
AAGTCTATCCAAAGATTCAT+TGG - chr7_4:59434167-59434186 None:intergenic 30.0%
!! ACCATCTTAGAATTTTAGGT+TGG + chr7_4:59434191-59434210 Msa1167150:intron 30.0%
!!! CCATCTTAGAATTTTAGGTT+GGG + chr7_4:59434192-59434211 Msa1167150:intron 30.0%
AAGATATAAGGTCTGAACAT+GGG - chr7_4:59434274-59434293 None:intergenic 30.0%
! TTTTGATCAGGAGTTTATCA+AGG + chr7_4:59434662-59434681 Msa1167150:CDS 30.0%
! AACTAAAGCAATGTCTTTTC+AGG + chr7_4:59434736-59434755 Msa1167150:intron 30.0%
AAACAAATGTGAAGTCCAAT+GGG - chr7_4:59434811-59434830 None:intergenic 30.0%
AGGGTGAACAAGAAAATATT+TGG - chr7_4:59434879-59434898 None:intergenic 30.0%
TAGACGAGAAACAAATGTTA+GGG - chr7_4:59434898-59434917 None:intergenic 30.0%
GGAACTTAATACAGAGATAT+TGG + chr7_4:59434958-59434977 Msa1167150:CDS 30.0%
AATCATGAACTATACATGTG+CGG - chr7_4:59435259-59435278 None:intergenic 30.0%
CACATGTATAGTTCATGATT+AGG + chr7_4:59435259-59435278 Msa1167150:intron 30.0%
TTAAATGGATGGATCAGATT+TGG - chr7_4:59435704-59435723 None:intergenic 30.0%
!! AAATTTTGGGGATAATTAGG+CGG - chr7_4:59435806-59435825 None:intergenic 30.0%
! AGATGGTGTAGAAAATTTTG+GGG - chr7_4:59435818-59435837 None:intergenic 30.0%
! GAGATGGTGTAGAAAATTTT+GGG - chr7_4:59435819-59435838 None:intergenic 30.0%
! AGAGATGGTGTAGAAAATTT+TGG - chr7_4:59435820-59435839 None:intergenic 30.0%
! AATTTTCTACACCATCTCTT+TGG + chr7_4:59435821-59435840 Msa1167150:intron 30.0%
AGAAGAATCTGAATTGTTGT+TGG - chr7_4:59435912-59435931 None:intergenic 30.0%
ATGAGATTGGGATCAAATTA+AGG + chr7_4:59436072-59436091 Msa1167150:intron 30.0%
TTGGGATCAAATTAAGGAAT+TGG + chr7_4:59436078-59436097 Msa1167150:intron 30.0%
TTAAGGAATTGGATTTGAGT+AGG + chr7_4:59436089-59436108 Msa1167150:intron 30.0%
TCAATTGGTATTTGATTGTG+TGG + chr7_4:59436232-59436251 Msa1167150:intron 30.0%
TTCATTTCATTGTTAAGGTG+GGG - chr7_4:59436332-59436351 None:intergenic 30.0%
GATCAAAACAAAGAATGGTT+AGG + chr7_4:59436369-59436388 Msa1167150:intron 30.0%
AACAAAGAATGGTTAGGATT+TGG + chr7_4:59436375-59436394 Msa1167150:intron 30.0%
GCAGAGGAAAATTAAAACTA+AGG - chr7_4:59436550-59436569 None:intergenic 30.0%
!!! TTTTAATTTTCCTCTGCAAC+CGG + chr7_4:59436553-59436572 Msa1167150:intron 30.0%
TGGAAGAATAGAATAGTTTG+GGG + chr7_4:59436587-59436606 Msa1167150:intron 30.0%
TGACTTTCCATTATTTAGGA+AGG - chr7_4:59436618-59436637 None:intergenic 30.0%
TGGAAAGTCAAAATATCAGT+TGG + chr7_4:59436628-59436647 Msa1167150:intron 30.0%
! TCTTTTTATGTCCAATCCAA+AGG + chr7_4:59436785-59436804 Msa1167150:intron 30.0%
TGAAATATAGGATGCTTTCA+AGG + chr7_4:59437084-59437103 Msa1167150:intron 30.0%
TGCAAATGTTTCGATGATTT+AGG + chr7_4:59437224-59437243 Msa1167150:intron 30.0%
GCAAATGTTTCGATGATTTA+GGG + chr7_4:59437225-59437244 Msa1167150:intron 30.0%
CAAATGTTTCGATGATTTAG+GGG + chr7_4:59437226-59437245 Msa1167150:intron 30.0%
AGGATTGTTCATTATTGACA+AGG + chr7_4:59437260-59437279 Msa1167150:CDS 30.0%
TTGTTCATTATTGACAAGGA+AGG + chr7_4:59437264-59437283 Msa1167150:CDS 30.0%
TGTTCATTATTGACAAGGAA+GGG + chr7_4:59437265-59437284 Msa1167150:CDS 30.0%
AGTACTCTTTGCTAAGTTTA+GGG - chr7_4:59437588-59437607 None:intergenic 30.0%
AAGTACTCTTTGCTAAGTTT+AGG - chr7_4:59437589-59437608 None:intergenic 30.0%
TTGCGCATCATAACTTAAAA+TGG - chr7_4:59437711-59437730 None:intergenic 30.0%
CATAATTCACTCCAAAATCA+AGG - chr7_4:59437765-59437784 None:intergenic 30.0%
ACAGATAAGAACAGAAGAAA+TGG - chr7_4:59437798-59437817 None:intergenic 30.0%
CTTACTTAAATCACAGAACA+AGG - chr7_4:59437875-59437894 None:intergenic 30.0%
TTCTGTGATTTAAGTAAGCA+AGG + chr7_4:59437877-59437896 Msa1167150:three_prime_UTR 30.0%
AACTTGAAATAGTGTCCGAA+TGG + chr7_4:59433044-59433063 Msa1167150:five_prime_UTR 35.0%
ACTTGAAATAGTGTCCGAAT+GGG + chr7_4:59433045-59433064 Msa1167150:five_prime_UTR 35.0%
ACCCCACCTAAAAAATAAGA+TGG - chr7_4:59433093-59433112 None:intergenic 35.0%
!!! TCTTATTTTTTAGGTGGGGT+TGG + chr7_4:59433093-59433112 Msa1167150:five_prime_UTR 35.0%
AAGATAATTTGGGAGAGAAG+AGG - chr7_4:59433247-59433266 None:intergenic 35.0%
! TGTGGTGGAGAAGATAATTT+GGG - chr7_4:59433257-59433276 None:intergenic 35.0%
! ATGTGGTGGAGAAGATAATT+TGG - chr7_4:59433258-59433277 None:intergenic 35.0%
ACACATAAGCTCAACAAAGA+GGG - chr7_4:59433415-59433434 None:intergenic 35.0%
AACACATAAGCTCAACAAAG+AGG - chr7_4:59433416-59433435 None:intergenic 35.0%
TAGATGCGATAGTCTATGTT+TGG + chr7_4:59433487-59433506 Msa1167150:intron 35.0%
ATGTAGTATAAGGGTCTATC+TGG + chr7_4:59433674-59433693 Msa1167150:intron 35.0%
!!! ACGGGTCATTTTTAGTCAAA+TGG - chr7_4:59433740-59433759 None:intergenic 35.0%
TTGACTAAAAATGACCCGTT+TGG + chr7_4:59433741-59433760 Msa1167150:intron 35.0%
AGAAAGCGATTGTTACCAAA+CGG - chr7_4:59433759-59433778 None:intergenic 35.0%
CCGATTGAATTTGTAGTGTT+TGG - chr7_4:59433997-59434016 None:intergenic 35.0%
! CGCTAACTTTTACCAAATAG+AGG + chr7_4:59434060-59434079 Msa1167150:intron 35.0%
! CCCAACCTAAAATTCTAAGA+TGG - chr7_4:59434195-59434214 None:intergenic 35.0%
GAAGATATAAGGTCTGAACA+TGG - chr7_4:59434275-59434294 None:intergenic 35.0%
GTCTCACATTGGAAGATATA+AGG - chr7_4:59434286-59434305 None:intergenic 35.0%
TATTCACTGCAATGCAACAA+TGG - chr7_4:59434325-59434344 None:intergenic 35.0%
TATTTCATTCATTTGCGTGC+TGG + chr7_4:59434464-59434483 Msa1167150:intron 35.0%
! TATCCTCTTTTTCTACCCAT+TGG + chr7_4:59434793-59434812 Msa1167150:CDS 35.0%
CAAACAAATGTGAAGTCCAA+TGG - chr7_4:59434812-59434831 None:intergenic 35.0%
GTAGACGAGAAACAAATGTT+AGG - chr7_4:59434899-59434918 None:intergenic 35.0%
AGTTCATGATTAGGAGTTCT+AGG + chr7_4:59435268-59435287 Msa1167150:intron 35.0%
GTTCATGATTAGGAGTTCTA+GGG + chr7_4:59435269-59435288 Msa1167150:intron 35.0%
! TTGTGTAGTTTCTAGGTTGA+GGG + chr7_4:59435426-59435445 Msa1167150:intron 35.0%
!! AAATTAGTTTGCTGGTCTAG+TGG - chr7_4:59435554-59435573 None:intergenic 35.0%
TTCCCTAAATTGCTAATGTG+AGG + chr7_4:59435746-59435765 Msa1167150:intron 35.0%
CACCTCACATTAGCAATTTA+GGG - chr7_4:59435751-59435770 None:intergenic 35.0%
TCACCTCACATTAGCAATTT+AGG - chr7_4:59435752-59435771 None:intergenic 35.0%
AATTAGGCGGAGATTAAACA+AGG - chr7_4:59435793-59435812 None:intergenic 35.0%
ATTGAGTAATTCATGGACGT+TGG - chr7_4:59435854-59435873 None:intergenic 35.0%
GAATTAACTTCGTGTATCCA+TGG + chr7_4:59435886-59435905 Msa1167150:intron 35.0%
CAATTCAGATTCTTCTTCAC+TGG + chr7_4:59435916-59435935 Msa1167150:intron 35.0%
CAAGAAAGACGATGAAACTA+TGG + chr7_4:59436112-59436131 Msa1167150:intron 35.0%
ATTAAAACTAAGGAGTCCAG+TGG - chr7_4:59436540-59436559 None:intergenic 35.0%
GGAAGTTCCTTCCTAAATAA+TGG + chr7_4:59436608-59436627 Msa1167150:intron 35.0%
ATCAAGAAGAAGCAGACTTT+AGG - chr7_4:59436815-59436834 None:intergenic 35.0%
GTCTGCTTCTTCTTGATTAT+CGG + chr7_4:59436818-59436837 Msa1167150:intron 35.0%
! TTGGTGACATCAGATACTAA+AGG - chr7_4:59436927-59436946 None:intergenic 35.0%
GTGTCAAAATTTACCTGATC+AGG - chr7_4:59436981-59437000 None:intergenic 35.0%
!! AGTAGTGAATAGCTTTGTCT+AGG + chr7_4:59437131-59437150 Msa1167150:intron 35.0%
GTTCATTATTGACAAGGAAG+GGG + chr7_4:59437266-59437285 Msa1167150:CDS 35.0%
GCAAGCTACATATAATTACC+TGG - chr7_4:59437359-59437378 None:intergenic 35.0%
TGCAAGTCCAATGCATATAT+GGG - chr7_4:59437484-59437503 None:intergenic 35.0%
!!! TAGCAAAGAGTACTTTTCTG+CGG + chr7_4:59437594-59437613 Msa1167150:CDS 35.0%
TCATCACACTCACTCAAACA+TGG + chr7_4:59433175-59433194 Msa1167150:exon 40.0%
GAAGATAAGAGAGAAGCAGA+TGG - chr7_4:59433212-59433231 None:intergenic 40.0%
ATGGAGAGAGAAGAAAGATG+TGG - chr7_4:59433275-59433294 None:intergenic 40.0%
TAGTTTAGGGAGAGAATTGG+AGG - chr7_4:59433306-59433325 None:intergenic 40.0%
! AAGCTTTAACGACGAAACTG+CGG - chr7_4:59433373-59433392 None:intergenic 40.0%
CACATAAGCTCAACAAAGAG+GGG - chr7_4:59433414-59433433 None:intergenic 40.0%
GAAAGCGATTGTTACCAAAC+GGG - chr7_4:59433758-59433777 None:intergenic 40.0%
ATGGACACATGCACAACATT+AGG + chr7_4:59434137-59434156 Msa1167150:intron 40.0%
TAGGTAGCCCAATGAATCTT+TGG + chr7_4:59434156-59434175 Msa1167150:intron 40.0%
! ATTTGTTACGCGTCTCACAT+TGG - chr7_4:59434297-59434316 None:intergenic 40.0%
TTCAACGCTTATAAGCCTCA+AGG - chr7_4:59434429-59434448 None:intergenic 40.0%
!! GAGGCTTATAAGCGTTGAAA+TGG + chr7_4:59434430-59434449 Msa1167150:intron 40.0%
AAGAGCGAACTACCATTAGT+TGG + chr7_4:59434606-59434625 Msa1167150:intron 40.0%
AGAGCGAACTACCATTAGTT+GGG + chr7_4:59434607-59434626 Msa1167150:intron 40.0%
AGTCCAATGGGTAGAAAAAG+AGG - chr7_4:59434799-59434818 None:intergenic 40.0%
TAAGTTCCGCAAATTCTGCA+TGG - chr7_4:59434946-59434965 None:intergenic 40.0%
ATGAAATTTGCACCTGACAG+TGG + chr7_4:59435394-59435413 Msa1167150:intron 40.0%
AAGTGCGTTGTGTAGTTTCT+AGG + chr7_4:59435419-59435438 Msa1167150:intron 40.0%
! GTTGTGTAGTTTCTAGGTTG+AGG + chr7_4:59435425-59435444 Msa1167150:intron 40.0%
! ATCTGAATTGTTGTTGGCCA+TGG - chr7_4:59435906-59435925 None:intergenic 40.0%
TTCAGATTCTTCTTCACTGG+TGG + chr7_4:59435919-59435938 Msa1167150:intron 40.0%
AAACATGGGAGCTATGAGAT+TGG + chr7_4:59436059-59436078 Msa1167150:intron 40.0%
AACATGGGAGCTATGAGATT+GGG + chr7_4:59436060-59436079 Msa1167150:intron 40.0%
CATCTGTAGTCAGAAGATCA+AGG - chr7_4:59436692-59436711 None:intergenic 40.0%
TAATGCATGCATGTGCTAGT+AGG - chr7_4:59436732-59436751 None:intergenic 40.0%
GTTCAAACAGACAGAAAGTC+CGG + chr7_4:59436879-59436898 Msa1167150:CDS 40.0%
ATAGACCACAGTTTAGATCG+TGG - chr7_4:59437003-59437022 None:intergenic 40.0%
GACACAGATCCGAAAAAAAG+TGG - chr7_4:59437198-59437217 None:intergenic 40.0%
! ATTTAGGGGATAGCATTGAG+AGG + chr7_4:59437240-59437259 Msa1167150:intron 40.0%
!! GGTTGTTGATGGTAGAATGT+TGG - chr7_4:59437296-59437315 None:intergenic 40.0%
CATTCTACCATCAACAACCT+CGG + chr7_4:59437297-59437316 Msa1167150:CDS 40.0%
AAATGTGGTCATTCCTGGTA+TGG - chr7_4:59437391-59437410 None:intergenic 40.0%
TGACTAAATGTGGTCATTCC+TGG - chr7_4:59437396-59437415 None:intergenic 40.0%
GTTTGTCCCCATATATGCAT+TGG + chr7_4:59437474-59437493 Msa1167150:intron 40.0%
GCAAGTCCAATGCATATATG+GGG - chr7_4:59437483-59437502 None:intergenic 40.0%
CTGCAAGTCCAATGCATATA+TGG - chr7_4:59437485-59437504 None:intergenic 40.0%
CATATATGCATTGGACTTGC+AGG + chr7_4:59437483-59437502 Msa1167150:intron 40.0%
! AAGTTTAGGGTCTGGTTTCA+TGG - chr7_4:59437575-59437594 None:intergenic 40.0%
! TCTTTGCTAAGTTTAGGGTC+TGG - chr7_4:59437583-59437602 None:intergenic 40.0%
! AACTGCTCATCTGTATCGAT+TGG + chr7_4:59437651-59437670 Msa1167150:three_prime_UTR 40.0%
!! ACTGCTCATCTGTATCGATT+GGG + chr7_4:59437652-59437671 Msa1167150:three_prime_UTR 40.0%
!! GTATCGATTGGGGATGTAAA+AGG + chr7_4:59437663-59437682 Msa1167150:three_prime_UTR 40.0%
! ATCGGTGTACACCTTGATTT+TGG + chr7_4:59437751-59437770 Msa1167150:three_prime_UTR 40.0%
TGAAATAGTGTCCGAATGGG+TGG + chr7_4:59433048-59433067 Msa1167150:five_prime_UTR 45.0%
! TTTGGCTTCTTCTACCTCAC+AGG + chr7_4:59433151-59433170 Msa1167150:five_prime_UTR 45.0%
TGGGAGAGAAGAGGATGTTA+GGG - chr7_4:59433238-59433257 None:intergenic 45.0%
TTGGGAGAGAAGAGGATGTT+AGG - chr7_4:59433239-59433258 None:intergenic 45.0%
GAGAGAGAAGAAAGATGTGG+TGG - chr7_4:59433272-59433291 None:intergenic 45.0%
AGAATTGGAGGAATTGGGGA+TGG - chr7_4:59433294-59433313 None:intergenic 45.0%
GGAGAGAATTGGAGGAATTG+GGG - chr7_4:59433298-59433317 None:intergenic 45.0%
GGGAGAGAATTGGAGGAATT+GGG - chr7_4:59433299-59433318 None:intergenic 45.0%
AGGGAGAGAATTGGAGGAAT+TGG - chr7_4:59433300-59433319 None:intergenic 45.0%
GCGTAGTTTAGGGAGAGAAT+TGG - chr7_4:59433309-59433328 None:intergenic 45.0%
!! CCTTACGAGTCGGTTTTGTA+AGG - chr7_4:59434228-59434247 None:intergenic 45.0%
!! CCTTACAAAACCGACTCGTA+AGG + chr7_4:59434225-59434244 Msa1167150:intron 45.0%
GCAATCTTCACCTTACGAGT+CGG - chr7_4:59434238-59434257 None:intergenic 45.0%
AACGCTTATAAGCCTCAAGG+AGG - chr7_4:59434426-59434445 None:intergenic 45.0%
ACAGCCTCAGCTTCAAAATC+TGG - chr7_4:59434642-59434661 None:intergenic 45.0%
!!! AGCTGAGGCTGTTTTTGATC+AGG + chr7_4:59434650-59434669 Msa1167150:CDS 45.0%
TTCACATTTGTTTGCCCCAC+AGG + chr7_4:59434818-59434837 Msa1167150:CDS 45.0%
CTTCGGTAGCAGATATGCAT+AGG - chr7_4:59435186-59435205 None:intergenic 45.0%
!! GAGTTCTAGGGAAATCTGCA+TGG + chr7_4:59435281-59435300 Msa1167150:intron 45.0%
!! AAAAAACGTGAAGGGTGCCA+CGG - chr7_4:59435346-59435365 None:intergenic 45.0%
TTGGTGTGTCTCCAAAGAGA+TGG - chr7_4:59435835-59435854 None:intergenic 45.0%
! ATTCTTCTTCACTGGTGGTG+TGG + chr7_4:59435924-59435943 Msa1167150:intron 45.0%
ACCGTAAGGATACCAGACAT+AGG + chr7_4:59436264-59436283 Msa1167150:intron 45.0%
CCCTATGTCTGGTATCCTTA+CGG - chr7_4:59436268-59436287 None:intergenic 45.0%
CCGTAAGGATACCAGACATA+GGG + chr7_4:59436265-59436284 Msa1167150:intron 45.0%
TAAGGATACCAGACATAGGG+AGG + chr7_4:59436268-59436287 Msa1167150:intron 45.0%
ATCTTCTTCCTCCCTATGTC+TGG - chr7_4:59436279-59436298 None:intergenic 45.0%
TCAACGAATTCGTTGACACC+TGG + chr7_4:59436400-59436419 Msa1167150:intron 45.0%
AAAACTAAGGAGTCCAGTGG+CGG - chr7_4:59436537-59436556 None:intergenic 45.0%
TTCTTCCATACGGATGTAGC+CGG - chr7_4:59436575-59436594 None:intergenic 45.0%
!! CTTTAGGAGTGCCTTTGGAT+TGG - chr7_4:59436799-59436818 None:intergenic 45.0%
TGTCTGTTTGAACCCATGCA+AGG - chr7_4:59436872-59436891 None:intergenic 45.0%
TGGTGTTCTCATTCCTGATC+AGG + chr7_4:59436965-59436984 Msa1167150:CDS 45.0%
TGACACCACGATCTAAACTG+TGG + chr7_4:59436995-59437014 Msa1167150:intron 45.0%
ACCATCAACAACCTCGGAAT+TGG + chr7_4:59437303-59437322 Msa1167150:CDS 45.0%
ACCAATTCCGAGGTTGTTGA+TGG - chr7_4:59437307-59437326 None:intergenic 45.0%
CAACACTTCTACCAATTCCG+AGG - chr7_4:59437317-59437336 None:intergenic 45.0%
TGAGACAAAGAGAACACTCC+AGG + chr7_4:59437338-59437357 Msa1167150:CDS 45.0%
TCATTCCTGGTATGGTGCAT+TGG - chr7_4:59437383-59437402 None:intergenic 45.0%
! TACTTTTCTGCGGTGTAGTG+TGG + chr7_4:59437604-59437623 Msa1167150:exon 45.0%
!! CTGCTCATCTGTATCGATTG+GGG + chr7_4:59437653-59437672 Msa1167150:three_prime_UTR 45.0%
AATAGTGTCCGAATGGGTGG+AGG + chr7_4:59433051-59433070 Msa1167150:five_prime_UTR 50.0%
ATGCTTCACCTCCACCCATT+CGG - chr7_4:59433062-59433081 None:intergenic 50.0%
! GGAGGGAAGTGCGTAGTTTA+GGG - chr7_4:59433319-59433338 None:intergenic 50.0%
AGAAGAAGAGGAGCGGTTGA+GGG - chr7_4:59433348-59433367 None:intergenic 50.0%
AAGCCTCAAGGAGGAAGAGT+CGG - chr7_4:59434417-59434436 None:intergenic 50.0%
!!! TGCGCCAGATTTTGAAGCTG+AGG + chr7_4:59434635-59434654 Msa1167150:CDS 50.0%
CATTTGTTTGCCCCACAGGT+TGG + chr7_4:59434822-59434841 Msa1167150:intron 50.0%
TAAAGGGTCGACCAACCTGT+GGG - chr7_4:59434836-59434855 None:intergenic 50.0%
TGACCGCCATGCAGAATTTG+CGG + chr7_4:59434937-59434956 Msa1167150:CDS 50.0%
GTTCCGCAAATTCTGCATGG+CGG - chr7_4:59434943-59434962 None:intergenic 50.0%
GGGTGTTTCAGTTGACAGTG+TGG + chr7_4:59434979-59434998 Msa1167150:CDS 50.0%
ATCTGCATGGACTCCTTCAG+TGG + chr7_4:59435294-59435313 Msa1167150:intron 50.0%
CAACGCACTTAACCACTGTC+AGG - chr7_4:59435409-59435428 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAC+AGG + chr7_4:59435642-59435661 Msa1167150:intron 50.0%
TCAACGAATCCGTTGACACC+TGG - chr7_4:59435679-59435698 None:intergenic 50.0%
TGTGGAAGAACCTGACCGTA+AGG + chr7_4:59436250-59436269 Msa1167150:intron 50.0%
TGTCTGGTATCCTTACGGTC+AGG - chr7_4:59436263-59436282 None:intergenic 50.0%
! CGTTGACACCTGGTGTCAAA+CGG + chr7_4:59436410-59436429 Msa1167150:intron 50.0%
GTTAGGATCCGTTTGACACC+AGG - chr7_4:59436421-59436440 None:intergenic 50.0%
TTTCAATCAAGCTCCGCCAC+TGG + chr7_4:59436521-59436540 Msa1167150:intron 50.0%
!! GCAGACTTTAGGAGTGCCTT+TGG - chr7_4:59436804-59436823 None:intergenic 50.0%
TGTAGTTCTCGCACCTTGCA+TGG + chr7_4:59436856-59436875 Msa1167150:intron 50.0%
GTAGTTCTCGCACCTTGCAT+GGG + chr7_4:59436857-59436876 Msa1167150:intron 50.0%
CAAACAGACAGAAAGTCCGG+TGG + chr7_4:59436882-59436901 Msa1167150:CDS 50.0%
TTGCACCAATGCACCATACC+AGG + chr7_4:59437375-59437394 Msa1167150:intron 50.0%
GTTCTCCTGCACGTATTGCA+AGG - chr7_4:59437509-59437528 None:intergenic 50.0%
GGTTTCATGGACTTCTCACC+AGG - chr7_4:59437562-59437581 None:intergenic 50.0%
GTGAGTGTGATGAGCCTGTG+AGG - chr7_4:59433168-59433187 None:intergenic 55.0%
AGAAGCAGATGGAGCTGAGC+AGG - chr7_4:59433201-59433220 None:intergenic 55.0%
! GGGAGGGAAGTGCGTAGTTT+AGG - chr7_4:59433320-59433339 None:intergenic 55.0%
AGGAGCGGTTGAGGGAAAGA+GGG - chr7_4:59433340-59433359 None:intergenic 55.0%
GAGAAGAAGAGGAGCGGTTG+AGG - chr7_4:59433349-59433368 None:intergenic 55.0%
GAAACTGCGGCGAGAAGAAG+AGG - chr7_4:59433360-59433379 None:intergenic 55.0%
TTCCCGACTCTTCCTCCTTG+AGG + chr7_4:59434411-59434430 Msa1167150:intron 55.0%
AGCCTCAAGGAGGAAGAGTC+GGG - chr7_4:59434416-59434435 None:intergenic 55.0%
AAAGGGTCGACCAACCTGTG+GGG - chr7_4:59434835-59434854 None:intergenic 55.0%
CTAAAGGGTCGACCAACCTG+TGG - chr7_4:59434837-59434856 None:intergenic 55.0%
TGCATGGACTCCTTCAGTGG+CGG + chr7_4:59435297-59435316 Msa1167150:intron 55.0%
! TTCAGTGGCGGGGCTTCTAT+GGG + chr7_4:59435309-59435328 Msa1167150:intron 55.0%
AGACAGGATCCGTTGACACC+AGG + chr7_4:59435658-59435677 Msa1167150:intron 55.0%
! CCGTTGACACCTGGTGTCAA+CGG - chr7_4:59435670-59435689 None:intergenic 55.0%
CCGTTGACACCAGGTGTCAA+CGG + chr7_4:59435667-59435686 Msa1167150:intron 55.0%
TGCAACCGGCTACATCCGTA+TGG + chr7_4:59436567-59436586 Msa1167150:intron 55.0%
GACAGAAAGTCCGGTGGTCT+CGG + chr7_4:59436888-59436907 Msa1167150:CDS 55.0%
GTTCAAGTCACCGAGACCAC+CGG - chr7_4:59436901-59436920 None:intergenic 55.0%
CAGCAGGGCAAACTTCATCG+GGG - chr7_4:59437531-59437550 None:intergenic 55.0%
CCAGCAGGGCAAACTTCATC+GGG - chr7_4:59437532-59437551 None:intergenic 55.0%
CCCAGCAGGGCAAACTTCAT+CGG - chr7_4:59437533-59437552 None:intergenic 55.0%
CCGATGAAGTTTGCCCTGCT+GGG + chr7_4:59437530-59437549 Msa1167150:CDS 55.0%
ATGAAGTTTGCCCTGCTGGG+TGG + chr7_4:59437533-59437552 Msa1167150:CDS 55.0%
GCGGTTGAGGGAAAGAGGGA+GGG - chr7_4:59433336-59433355 None:intergenic 60.0%
AGCGGTTGAGGGAAAGAGGG+AGG - chr7_4:59433337-59433356 None:intergenic 60.0%
GAGGAGCGGTTGAGGGAAAG+AGG - chr7_4:59433341-59433360 None:intergenic 60.0%
TGCGGCGAGAAGAAGAGGAG+CGG - chr7_4:59433355-59433374 None:intergenic 60.0%
GGCGCAGCGTTCCCAACTAA+TGG - chr7_4:59434621-59434640 None:intergenic 60.0%
GCATGGACTCCTTCAGTGGC+GGG + chr7_4:59435298-59435317 Msa1167150:intron 60.0%
CATGGACTCCTTCAGTGGCG+GGG + chr7_4:59435299-59435318 Msa1167150:intron 60.0%
CATAGAAGCCCCGCCACTGA+AGG - chr7_4:59435310-59435329 None:intergenic 60.0%
! CTTCAGTGGCGGGGCTTCTA+TGG + chr7_4:59435308-59435327 Msa1167150:intron 60.0%
TATGGGCCGGGTTAATGCCG+TGG + chr7_4:59435326-59435345 Msa1167150:intron 60.0%
! AGGGTGCCACGGCATTAACC+CGG - chr7_4:59435335-59435354 None:intergenic 60.0%
ACGGATGTAGCCGGTTGCAG+AGG - chr7_4:59436566-59436585 None:intergenic 60.0%
GCAGGCCTTGCAATACGTGC+AGG + chr7_4:59437501-59437520 Msa1167150:intron 60.0%
CCCGATGAAGTTTGCCCTGC+TGG + chr7_4:59437529-59437548 Msa1167150:CDS 60.0%
AGGTGGGGTTGGAGCCTCTG+AGG + chr7_4:59433104-59433123 Msa1167150:five_prime_UTR 65.0%
CACCAGGCTTCCACCCAGCA+GGG - chr7_4:59437546-59437565 None:intergenic 65.0%
TCACCAGGCTTCCACCCAGC+AGG - chr7_4:59437547-59437566 None:intergenic 65.0%
! GTGGCGGGGCTTCTATGGGC+CGG + chr7_4:59435313-59435332 Msa1167150:intron 70.0%
TGGCGGGGCTTCTATGGGCC+GGG + chr7_4:59435314-59435333 Msa1167150:intron 70.0%
TGCCCTGCTGGGTGGAAGCC+TGG + chr7_4:59437541-59437560 Msa1167150:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 59433010 59437915 59433010 ID=Msa1167150;Name=Msa1167150
chr7_4 mRNA 59433010 59437915 59433010 ID=Msa1167150-mRNA-1;Parent=Msa1167150;Name=Msa1167150-mRNA-1;_AED=0.04;_eAED=0.04;_QI=184|1|1|1|1|1|7|294|264
chr7_4 exon 59433010 59433394 59433010 ID=Msa1167150-mRNA-1:exon:18461;Parent=Msa1167150-mRNA-1
chr7_4 exon 59434609 59434683 59434609 ID=Msa1167150-mRNA-1:exon:18462;Parent=Msa1167150-mRNA-1
chr7_4 exon 59434758 59434839 59434758 ID=Msa1167150-mRNA-1:exon:18463;Parent=Msa1167150-mRNA-1
chr7_4 exon 59434921 59435000 59434921 ID=Msa1167150-mRNA-1:exon:18464;Parent=Msa1167150-mRNA-1
chr7_4 exon 59436861 59436986 59436861 ID=Msa1167150-mRNA-1:exon:18465;Parent=Msa1167150-mRNA-1
chr7_4 exon 59437246 59437359 59437246 ID=Msa1167150-mRNA-1:exon:18466;Parent=Msa1167150-mRNA-1
chr7_4 exon 59437505 59437915 59437505 ID=Msa1167150-mRNA-1:exon:18467;Parent=Msa1167150-mRNA-1
chr7_4 five_prime_UTR 59433010 59433193 59433010 ID=Msa1167150-mRNA-1:five_prime_utr;Parent=Msa1167150-mRNA-1
chr7_4 CDS 59433194 59433394 59433194 ID=Msa1167150-mRNA-1:cds;Parent=Msa1167150-mRNA-1
chr7_4 CDS 59434609 59434683 59434609 ID=Msa1167150-mRNA-1:cds;Parent=Msa1167150-mRNA-1
chr7_4 CDS 59434758 59434839 59434758 ID=Msa1167150-mRNA-1:cds;Parent=Msa1167150-mRNA-1
chr7_4 CDS 59434921 59435000 59434921 ID=Msa1167150-mRNA-1:cds;Parent=Msa1167150-mRNA-1
chr7_4 CDS 59436861 59436986 59436861 ID=Msa1167150-mRNA-1:cds;Parent=Msa1167150-mRNA-1
chr7_4 CDS 59437246 59437359 59437246 ID=Msa1167150-mRNA-1:cds;Parent=Msa1167150-mRNA-1
chr7_4 CDS 59437505 59437621 59437505 ID=Msa1167150-mRNA-1:cds;Parent=Msa1167150-mRNA-1
chr7_4 three_prime_UTR 59437622 59437915 59437622 ID=Msa1167150-mRNA-1:three_prime_utr;Parent=Msa1167150-mRNA-1
Gene Sequence

>Msa1167150

ATGGCCTGCTCAGCTCCATCTGCTTCTCTCTTATCTTCAAACCCTAACATCCTCTTCTCTCCCAAATTATCTTCTCCACCACATCTTTCTTCTCTCTCCATCCCCAATTCCTCCAATTCTCTCCCTAAACTACGCACTTCCCTCCCTCTTTCCCTCAACCGCTCCTCTTCTTCTCGCCGCAGTTTCGTCGTTAAAGCTTCTAGCGAACTACCATTAGTTGGGAACGCTGCGCCAGATTTTGAAGCTGAGGCTGTTTTTGATCAGGAGTTTATCAAGGTTAAACTATCTGAATATATTGGGAAGAAATATGTTATCCTCTTTTTCTACCCATTGGACTTCACATTTGTTTGCCCCACAGAAATCACTGCTTTCAGTGACCGCCATGCAGAATTTGCGGAACTTAATACAGAGATATTGGGTGTTTCAGTTGACAGTGTGTTCTCGCACCTTGCATGGGTTCAAACAGACAGAAAGTCCGGTGGTCTCGGTGACTTGAACTATCCTTTAGTATCTGATGTCACCAAATCCATATCAAAATCTTATGGTGTTCTCATTCCTGATCAGGGGATAGCATTGAGAGGATTGTTCATTATTGACAAGGAAGGGGTTATCCAACATTCTACCATCAACAACCTCGGAATTGGTAGAAGTGTTGATGAGACAAAGAGAACACTCCAGGCCTTGCAATACGTGCAGGAGAACCCCGATGAAGTTTGCCCTGCTGGGTGGAAGCCTGGTGAGAAGTCCATGAAACCAGACCCTAAACTTAGCAAAGAGTACTTTTCTGCGGTGTAG

Protein sequence

>Msa1167150

MACSAPSASLLSSNPNILFSPKLSSPPHLSSLSIPNSSNSLPKLRTSLPLSLNRSSSSRRSFVVKASSELPLVGNAAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFAELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAV*