AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0591790


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0591790 MtrunA17_Chr4g0008851 98.378 370 6 0 1 370 1 370 0.0 752
Msa0591790 MtrunA17_Chr7g0274991 75.741 371 87 2 1 370 1 369 0.0 587
Msa0591790 MtrunA17_Chr7g0275011 69.945 366 103 2 9 369 6 369 0.0 525
Msa0591790 MtrunA17_Chr7g0275001 68.802 359 108 3 13 370 7 362 0.0 515
Msa0591790 MtrunA17_Chr1g0189931 70.326 337 98 1 31 367 31 365 0.0 512
Msa0591790 MtrunA17_Chr6g0457921 67.867 361 111 3 13 370 8 366 2.06e-180 504
Msa0591790 MtrunA17_Chr7g0275021 65.854 369 115 3 11 370 4 370 8.53e-179 501
Msa0591790 MtrunA17_Chr1g0189901 65.110 364 118 3 12 368 4 365 4.93e-176 494
Msa0591790 MtrunA17_Chr1g0182811 61.773 361 134 3 10 368 11 369 2.76e-166 469
Msa0591790 MtrunA17_Chr7g0215961 62.500 360 118 3 13 370 12 356 3.88e-164 463
Msa0591790 MtrunA17_Chr1g0189891 62.740 365 122 5 9 369 5 359 3.95e-161 456
Msa0591790 MtrunA17_Chr5g0434621 38.889 342 201 7 10 349 3 338 1.71e-78 245
Msa0591790 MtrunA17_Chr4g0068441 37.571 354 213 6 13 363 17 365 6.21e-74 234
Msa0591790 MtrunA17_Chr8g0374101 36.512 367 219 9 8 363 10 373 1.07e-73 233
Msa0591790 MtrunA17_Chr3g0131321 37.092 337 197 6 32 360 34 363 4.49e-70 224
Msa0591790 MtrunA17_Chr4g0017431 32.687 361 237 4 7 366 8 363 3.53e-69 221
Msa0591790 MtrunA17_Chr2g0294311 35.657 373 219 8 7 364 5 371 3.65e-69 221
Msa0591790 MtrunA17_Chr8g0380041 36.134 357 219 7 14 366 12 363 5.04e-69 221
Msa0591790 MtrunA17_Chr2g0294301 36.283 339 209 5 29 364 32 366 7.91e-69 220
Msa0591790 MtrunA17_Chr3g0077571 35.028 354 223 6 10 363 8 354 1.79e-68 219
Msa0591790 MtrunA17_Chr5g0438641 34.294 347 218 7 1 343 1 341 1.89e-68 219
Msa0591790 MtrunA17_Chr3g0086641 37.464 347 203 8 6 343 5 346 5.58e-68 218
Msa0591790 MtrunA17_Chr3g0105401 37.135 342 205 8 6 343 3 338 1.52e-67 216
Msa0591790 MtrunA17_Chr5g0438621 35.503 338 201 7 15 340 4 336 7.74e-67 215
Msa0591790 MtrunA17_Chr3g0092131 36.593 317 195 5 34 348 25 337 5.01e-66 213
Msa0591790 MtrunA17_Chr2g0285061 37.353 340 198 8 10 343 11 341 5.09e-66 213
Msa0591790 MtrunA17_Chr3g0120861 35.802 324 200 6 25 345 31 349 7.00e-66 213
Msa0591790 MtrunA17_Chr5g0444401 35.380 342 205 6 32 365 28 361 4.84e-65 211
Msa0591790 MtrunA17_Chr4g0060811 37.224 317 193 5 34 348 29 341 4.27e-64 208
Msa0591790 MtrunA17_Chr5g0438631 36.709 316 191 6 32 343 28 338 7.41e-64 207
Msa0591790 MtrunA17_Chr1g0156921 34.375 352 210 7 7 344 8 352 4.93e-63 205
Msa0591790 MtrunA17_Chr3g0099151 34.795 365 218 8 13 366 67 422 1.91e-62 206
Msa0591790 MtrunA17_Chr3g0099161 34.435 363 221 9 13 366 72 426 5.38e-62 204
Msa0591790 MtrunA17_Chr5g0396511 33.934 333 215 4 34 364 48 377 1.03e-61 202
Msa0591790 MtrunA17_Chr5g0432101 34.161 322 201 7 32 348 33 348 2.54e-61 201
Msa0591790 MtrunA17_Chr1g0156931 34.675 323 203 6 28 348 37 353 3.10e-61 201
Msa0591790 MtrunA17_Chr8g0371491 34.286 350 207 8 15 346 8 352 1.30e-60 199
Msa0591790 MtrunA17_Chr3g0077581 33.875 369 222 10 14 366 8 370 7.47e-59 194
Msa0591790 MtrunA17_Chr5g0405831 35.127 316 196 7 32 343 43 353 8.33e-59 194
Msa0591790 MtrunA17_Chr3g0099231 32.787 366 230 8 7 364 2 359 8.61e-59 195
Msa0591790 MtrunA17_Chr2g0301641 33.243 367 219 9 18 369 25 380 1.10e-58 195
Msa0591790 MtrunA17_Chr2g0330781 34.472 322 200 7 32 348 31 346 3.01e-58 192
Msa0591790 MtrunA17_Chr1g0156901 35.736 333 196 7 32 358 50 370 4.26e-58 192
Msa0591790 MtrunA17_Chr1g0156891 35.328 351 214 8 13 355 20 365 5.58e-58 192
Msa0591790 MtrunA17_Chr8g0371481 33.742 326 207 7 32 353 41 361 2.44e-57 191
Msa0591790 MtrunA17_Chr3g0085881 35.224 335 199 9 32 364 33 351 3.58e-57 190
Msa0591790 MtrunA17_Chr8g0341001 33.144 353 224 9 1 348 2 347 4.62e-57 189
Msa0591790 MtrunA17_Chr2g0320671 33.903 351 222 7 1 348 1 344 4.13e-56 187
Msa0591790 MtrunA17_Chr4g0046151 31.268 355 224 7 13 350 15 366 4.44e-56 187
Msa0591790 MtrunA17_Chr5g0405821 35.331 317 195 8 32 343 43 354 4.81e-56 187
Msa0591790 MtrunA17_Chr8g0371471 32.923 325 210 6 32 353 41 360 6.93e-56 187
Msa0591790 MtrunA17_Chr1g0189911 55.405 148 63 2 221 367 2 147 7.11e-56 180
Msa0591790 MtrunA17_Chr3g0142941 33.438 320 196 6 32 344 47 356 9.36e-56 186
Msa0591790 MtrunA17_Chr1g0156911 34.286 315 200 5 32 344 37 346 1.26e-55 186
Msa0591790 MtrunA17_Chr4g0027521 33.951 324 201 7 32 348 27 344 2.38e-53 180
Msa0591790 MtrunA17_Chr3g0142921 32.424 330 212 7 32 358 36 357 8.33e-53 179
Msa0591790 MtrunA17_Chr2g0283191 31.487 343 222 6 7 339 13 352 4.21e-52 177
Msa0591790 MtrunA17_Chr2g0284921 32.070 343 214 7 29 369 31 356 1.03e-50 173
Msa0591790 MtrunA17_Chr8g0349321 33.043 345 207 8 29 364 34 363 1.11e-50 173
Msa0591790 MtrunA17_Chr2g0284951 32.153 339 212 8 32 367 33 356 1.31e-50 173
Msa0591790 MtrunA17_Chr8g0380031 30.435 368 237 9 1 366 56 406 9.26e-50 172
Msa0591790 MtrunA17_Chr1g0157001 33.043 345 200 8 37 363 41 372 1.86e-49 170
Msa0591790 MtrunA17_Chr8g0370951 31.421 366 229 11 13 364 9 366 3.58e-49 169
Msa0591790 MtrunA17_Chr8g0349341 31.793 368 218 11 13 364 13 363 1.32e-47 165
Msa0591790 MtrunA17_Chr2g0285001 30.376 372 223 9 13 367 10 362 4.51e-47 164
Msa0591790 MtrunA17_Chr2g0284991 31.267 371 231 9 7 369 1 355 1.58e-46 162
Msa0591790 MtrunA17_Chr7g0228261 72.043 93 26 0 277 369 3 95 6.62e-46 152
Msa0591790 MtrunA17_Chr8g0370981 30.000 390 206 8 30 365 42 418 9.21e-46 162
Msa0591790 MtrunA17_Chr5g0437421 29.268 328 219 5 32 351 32 354 6.78e-45 158
Msa0591790 MtrunA17_Chr8g0344941 28.650 363 228 10 8 351 9 359 1.79e-44 157
Msa0591790 MtrunA17_Chr1g0189921 63.333 120 38 1 13 126 6 125 4.96e-44 149
Msa0591790 MtrunA17_Chr2g0284941 30.925 346 187 9 34 367 35 340 1.44e-41 149
Msa0591790 MtrunA17_Chr8g0349301 33.448 290 173 8 29 314 34 307 6.44e-41 146
Msa0591790 MtrunA17_Chr8g0344931 28.533 368 237 10 7 366 12 361 1.14e-40 147
Msa0591790 MtrunA17_Chr8g0370961 31.381 239 150 5 129 363 14 242 4.71e-39 139
Msa0591790 MtrunA17_Chr5g0420811 29.032 341 218 11 13 346 11 334 2.55e-38 140
Msa0591790 MtrunA17_Chr3g0085231 26.113 337 226 9 32 364 31 348 1.53e-35 133
Msa0591790 MtrunA17_Chr8g0349331 28.406 345 193 8 29 364 32 331 2.29e-35 132
Msa0591790 MtrunA17_Chr8g0381581 27.926 376 221 15 9 350 15 374 1.57e-32 125
Msa0591790 MtrunA17_Chr1g0160031 28.158 380 227 16 1 351 7 369 8.12e-31 120
Msa0591790 MtrunA17_Chr1g0160011 27.989 368 216 14 13 350 21 369 1.47e-30 120
Msa0591790 MtrunA17_Chr7g0254461 26.722 363 213 14 24 351 35 379 2.60e-30 119
Msa0591790 MtrunA17_Chr7g0271551 28.614 339 207 13 34 357 38 356 3.40e-29 116
Msa0591790 MtrunA17_Chr7g0229591 38.462 169 102 2 14 181 12 179 8.37e-28 108
Msa0591790 MtrunA17_Chr2g0283481 30.499 341 203 13 32 350 47 375 1.54e-27 112
Msa0591790 MtrunA17_Chr1g0159991 29.040 396 222 16 1 359 4 377 3.95e-27 110
Msa0591790 MtrunA17_Chr7g0275291 28.385 384 221 18 1 351 1 363 5.23e-27 110
Msa0591790 MtrunA17_Chr4g0027571 28.125 224 155 4 135 356 3 222 2.67e-26 105
Msa0591790 MtrunA17_Chr2g0283511 29.086 361 222 14 13 350 12 361 8.95e-26 107
Msa0591790 MtrunA17_Chr1g0160101 27.708 397 225 17 5 361 12 386 1.48e-25 106
Msa0591790 MtrunA17_Chr2g0283501 29.825 342 205 13 32 350 31 360 1.87e-25 105
Msa0591790 MtrunA17_Chr6g0455661 26.941 219 155 3 130 346 238 453 6.70e-25 105
Msa0591790 MtrunA17_Chr6g0455661 50.000 94 44 2 30 123 29 119 1.42e-17 84.0
Msa0591790 MtrunA17_Chr1g0159971 27.179 390 219 16 3 350 12 378 6.93e-25 104
Msa0591790 MtrunA17_Chr1g0159981 26.289 388 233 16 6 359 19 387 7.24e-25 104
Msa0591790 MtrunA17_Chr7g0273101 26.836 354 213 11 27 350 24 361 1.01e-24 103
Msa0591790 MtrunA17_Chr6g0459921 26.484 219 156 3 130 346 127 342 1.17e-24 103
Msa0591790 MtrunA17_Chr2g0301581 28.000 375 216 14 1 350 1 346 8.37e-24 100
Msa0591790 MtrunA17_Chr7g0226941 27.762 353 203 15 32 351 33 366 2.97e-23 99.8
Msa0591790 MtrunA17_Chr2g0301541 27.733 375 217 14 1 350 1 346 1.01e-22 97.8
Msa0591790 MtrunA17_Chr8g0352901 27.273 374 229 13 7 351 1 360 1.28e-22 97.8
Msa0591790 MtrunA17_Chr3g0104821 25.770 357 230 13 17 350 29 373 2.73e-22 97.1
Msa0591790 MtrunA17_Chr2g0283531 29.915 351 192 17 32 350 31 359 1.18e-21 95.1
Msa0591790 MtrunA17_Chr6g0469511 46.491 114 59 2 32 144 30 142 1.34e-21 89.7
Msa0591790 MtrunA17_Chr7g0226911 22.835 381 236 13 9 351 12 372 1.74e-21 94.7
Msa0591790 MtrunA17_Chr6g0450721 27.193 342 210 12 32 357 33 351 1.88e-21 94.4
Msa0591790 MtrunA17_Chr6g0450731 26.016 369 230 13 5 351 2 349 4.02e-21 93.6
Msa0591790 MtrunA17_Chr8g0347751 25.000 368 229 14 16 351 18 370 4.17e-21 93.6
Msa0591790 MtrunA17_Chr1g0191461 25.956 366 225 13 13 349 13 361 5.16e-21 93.2
Msa0591790 MtrunA17_Chr6g0450701 27.487 382 225 16 5 351 2 366 6.96e-21 92.8
Msa0591790 MtrunA17_Chr7g0266061 25.000 328 207 12 33 347 43 344 5.41e-20 90.1
Msa0591790 MtrunA17_Chr1g0178931 25.000 320 202 13 30 337 35 328 8.86e-20 89.4
Msa0591790 MtrunA17_Chr4g0027561 43.103 116 65 1 14 128 12 127 1.08e-19 84.7
Msa0591790 MtrunA17_Chr6g0450711 27.089 347 207 14 32 351 122 449 2.71e-19 89.0
Msa0591790 MtrunA17_Chr4g0057991 25.723 346 222 13 31 357 38 367 3.71e-19 87.8
Msa0591790 MtrunA17_Chr7g0226931 23.367 398 236 14 3 351 9 386 4.43e-19 87.8
Msa0591790 MtrunA17_Chr8g0370971 39.456 147 78 4 1 136 1 147 1.03e-18 82.4
Msa0591790 MtrunA17_Chr3g0112821 26.471 340 221 13 31 354 29 355 1.51e-18 85.9
Msa0591790 MtrunA17_Chr5g0440501 23.868 243 171 6 132 364 11 249 2.60e-18 83.6
Msa0591790 MtrunA17_Chr2g0317271 25.895 363 225 13 12 350 2 344 3.30e-18 85.1
Msa0591790 MtrunA17_Chr1g0178941 25.153 326 202 13 30 337 38 339 4.60e-18 84.7
Msa0591790 MtrunA17_Chr1g0198351 25.352 355 209 16 7 337 11 333 1.21e-17 83.2
Msa0591790 MtrunA17_Chr0c01g0489581 26.462 359 216 14 18 350 8 344 1.45e-17 83.2
Msa0591790 MtrunA17_Chr2g0317261 25.620 363 226 13 12 350 2 344 1.82e-17 82.8
Msa0591790 MtrunA17_Chr0c01g0489571 26.462 359 216 14 18 350 8 344 2.05e-17 82.8
Msa0591790 MtrunA17_Chr7g0229581 29.139 151 103 3 208 356 7 155 5.68e-17 77.8
Msa0591790 MtrunA17_Chr2g0301551 26.441 295 170 11 78 350 33 302 1.89e-14 73.6
Msa0591790 MtrunA17_Chr8g0339251 25.758 330 202 11 7 318 1 305 3.83e-14 72.8
Msa0591790 MtrunA17_Chr2g0301571 26.441 295 170 11 78 350 33 302 4.56e-14 72.4
Msa0591790 MtrunA17_Chr2g0301591 26.349 315 178 11 1 293 1 283 2.22e-12 67.0
Msa0591790 MtrunA17_Chr2g0321991 38.393 112 61 2 14 117 8 119 4.43e-12 62.8
Msa0591790 MtrunA17_Chr4g0018571 30.137 146 98 3 205 348 27 170 6.35e-12 63.9
Msa0591790 MtrunA17_Chr2g0284931 25.541 231 136 5 123 353 11 205 5.09e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0591790 AT5G33370.1 70.225 356 104 1 15 370 13 366 0.0 537
Msa0591790 AT3G04290.1 72.807 342 91 1 27 368 24 363 0.0 525
Msa0591790 AT5G18430.1 67.507 357 109 4 12 366 11 362 4.33e-172 484
Msa0591790 AT4G28780.1 63.859 368 120 4 12 369 2 366 2.94e-167 472
Msa0591790 AT5G33370.2 70.357 280 81 1 15 294 13 290 1.86e-144 412
Msa0591790 AT2G23540.1 37.427 342 205 7 32 366 48 387 1.37e-77 244
Msa0591790 AT3G50400.1 39.481 347 199 10 22 360 25 368 1.86e-76 241
Msa0591790 AT2G42990.1 37.249 349 210 7 11 356 8 350 3.42e-74 234
Msa0591790 AT4G18970.1 39.823 339 193 7 30 363 26 358 9.08e-74 233
Msa0591790 AT4G18970.2 39.823 339 193 7 30 363 26 358 4.81e-73 233
Msa0591790 AT5G15720.1 37.101 345 209 5 26 366 24 364 5.90e-73 231
Msa0591790 AT5G37690.1 39.617 313 183 5 34 345 29 336 6.76e-73 231
Msa0591790 AT5G45670.1 35.616 365 226 7 6 366 3 362 1.58e-72 230
Msa0591790 AT1G29660.1 35.946 370 227 8 1 366 1 364 1.37e-70 225
Msa0591790 AT1G71250.1 34.734 357 222 5 15 363 17 370 3.18e-70 224
Msa0591790 AT5G08460.1 36.716 335 208 4 32 363 49 382 9.06e-70 224
Msa0591790 AT1G29670.1 35.734 361 219 6 14 366 8 363 1.36e-69 223
Msa0591790 AT1G29670.2 36.034 358 216 6 14 363 76 428 7.21e-69 223
Msa0591790 AT1G71691.2 38.279 337 200 7 32 367 55 384 2.87e-68 220
Msa0591790 AT4G26790.1 35.938 320 197 6 32 348 29 343 1.09e-67 217
Msa0591790 AT4G26790.2 35.938 320 197 6 32 348 29 343 1.09e-67 217
Msa0591790 AT5G37690.2 38.339 313 179 6 34 345 29 328 1.79e-67 217
Msa0591790 AT1G75880.1 36.250 320 197 5 32 348 52 367 6.70e-67 216
Msa0591790 AT1G75880.2 36.250 320 196 6 32 348 52 366 4.78e-66 214
Msa0591790 AT1G33811.1 36.467 351 211 9 20 363 22 367 3.69e-65 211
Msa0591790 AT2G30310.1 35.783 313 191 7 32 339 34 341 2.30e-64 209
Msa0591790 AT2G30220.1 36.278 317 192 7 32 343 33 344 2.98e-64 209
Msa0591790 AT2G04570.1 35.604 323 200 6 32 351 28 345 3.27e-64 208
Msa0591790 AT1G75890.2 35.913 323 194 8 32 348 47 362 4.13e-64 209
Msa0591790 AT1G75890.3 35.913 323 194 8 32 348 76 391 8.13e-64 209
Msa0591790 AT1G74460.1 36.308 325 200 6 34 356 25 344 1.36e-63 207
Msa0591790 AT1G58430.1 36.452 310 189 6 32 337 35 340 2.54e-63 206
Msa0591790 AT5G42170.1 35.000 320 197 6 32 348 50 361 4.95e-62 203
Msa0591790 AT2G31540.1 36.278 317 192 7 32 343 35 346 7.54e-62 202
Msa0591790 AT1G06990.1 34.295 312 196 6 32 339 37 343 1.11e-61 202
Msa0591790 AT5G03820.2 36.769 359 207 8 1 348 28 377 1.91e-61 202
Msa0591790 AT5G03820.1 36.261 353 199 8 13 348 6 349 3.56e-61 201
Msa0591790 AT5G41890.1 32.065 368 225 9 14 363 12 372 3.84e-61 201
Msa0591790 AT1G75890.1 34.627 335 195 9 32 348 47 375 5.00e-61 201
Msa0591790 AT2G24560.1 35.144 313 189 7 32 337 34 339 1.12e-60 199
Msa0591790 AT5G03810.1 36.827 353 204 8 6 348 2 345 2.52e-60 198
Msa0591790 AT1G75900.1 32.945 343 219 7 6 344 17 352 2.94e-60 198
Msa0591790 AT1G20120.1 33.851 322 201 7 32 348 78 392 7.90e-60 198
Msa0591790 AT4G10950.2 34.030 335 216 4 32 364 71 402 2.33e-59 197
Msa0591790 AT3G16370.1 36.909 317 191 7 32 344 30 341 2.78e-59 196
Msa0591790 AT5G45950.1 33.033 333 211 7 25 353 29 353 6.45e-59 195
Msa0591790 AT1G59406.1 35.202 321 195 6 32 348 30 341 7.58e-59 194
Msa0591790 AT1G59030.1 35.202 321 195 6 32 348 30 341 7.58e-59 194
Msa0591790 AT1G58725.1 35.202 321 195 6 32 348 30 341 7.58e-59 194
Msa0591790 AT1G20130.2 33.033 333 200 8 32 348 184 509 8.96e-58 196
Msa0591790 AT1G20130.1 33.033 333 200 8 32 348 204 529 1.67e-57 196
Msa0591790 AT5G22810.1 36.615 325 191 9 32 348 34 351 2.34e-57 191
Msa0591790 AT5G45960.1 32.907 313 202 4 32 339 47 356 3.04e-57 191
Msa0591790 AT1G20132.1 35.238 315 196 6 32 343 61 370 4.14e-57 191
Msa0591790 AT4G10950.1 34.226 336 210 6 32 364 71 398 1.44e-56 190
Msa0591790 AT3G53100.1 36.760 321 193 7 32 348 29 343 3.63e-56 187
Msa0591790 AT5G63170.1 34.911 338 199 9 5 339 2 321 4.42e-55 184
Msa0591790 AT1G58520.3 34.579 321 190 7 32 348 30 334 8.45e-55 184
Msa0591790 AT1G58525.1 34.579 321 190 7 32 348 30 334 8.45e-55 184
Msa0591790 AT5G55050.1 33.431 341 214 7 33 365 40 375 6.38e-54 182
Msa0591790 AT2G19060.1 32.857 350 207 11 12 350 4 336 1.08e-53 181
Msa0591790 AT5G15720.3 34.296 277 176 4 94 366 59 333 3.80e-53 179
Msa0591790 AT2G19010.1 33.048 351 211 10 17 363 15 345 3.95e-53 179
Msa0591790 AT5G40990.1 31.481 378 231 11 9 367 6 374 4.31e-53 180
Msa0591790 AT3G43570.1 33.229 319 175 6 32 348 30 312 5.80e-53 178
Msa0591790 AT2G19010.2 33.048 351 211 10 17 363 45 375 1.21e-52 179
Msa0591790 AT4G16230.1 44.105 229 114 5 13 231 5 229 2.61e-52 174
Msa0591790 AT1G73610.1 34.688 320 188 8 32 348 35 336 5.87e-52 176
Msa0591790 AT2G40250.1 31.875 320 204 5 32 343 36 349 8.61e-52 176
Msa0591790 AT5G15720.2 37.545 277 165 5 26 298 24 296 3.15e-51 173
Msa0591790 AT1G20135.1 31.343 335 207 9 17 344 9 327 6.98e-51 173
Msa0591790 AT2G19050.1 33.036 336 199 8 33 363 32 346 1.18e-50 173
Msa0591790 AT1G71691.1 34.843 287 180 6 82 367 3 283 4.26e-50 169
Msa0591790 AT3G14820.1 30.571 350 225 9 14 356 12 350 1.97e-49 170
Msa0591790 AT4G30140.1 33.634 333 201 8 33 364 34 347 3.42e-49 169
Msa0591790 AT2G24560.2 33.803 284 174 7 32 308 34 310 3.82e-48 166
Msa0591790 AT1G53940.2 31.429 350 214 12 32 367 39 376 1.09e-47 166
Msa0591790 AT1G23500.1 31.707 328 202 8 27 350 30 339 2.18e-46 162
Msa0591790 AT3G14225.1 30.484 351 218 10 32 366 37 377 5.47e-46 161
Msa0591790 AT1G71120.1 33.235 340 204 13 32 363 31 355 5.86e-46 161
Msa0591790 AT3G14225.2 30.659 349 216 10 32 366 37 373 8.45e-46 161
Msa0591790 AT1G71691.3 39.015 264 153 7 32 294 55 311 1.66e-45 159
Msa0591790 AT1G75920.2 29.683 347 214 8 15 348 6 335 1.25e-44 157
Msa0591790 AT1G75910.1 30.938 320 206 6 32 348 28 335 1.52e-44 157
Msa0591790 AT1G75930.1 32.492 317 194 8 32 343 29 330 1.56e-44 157
Msa0591790 AT1G53990.1 29.521 376 224 13 13 366 8 364 4.44e-43 154
Msa0591790 AT3G43550.1 33.456 272 169 5 26 294 24 286 2.18e-42 149
Msa0591790 AT1G75920.1 28.453 362 214 9 15 348 1 345 9.19e-41 147
Msa0591790 AT2G19050.2 34.568 243 151 3 33 275 32 266 9.37e-40 142
Msa0591790 AT2G03980.2 30.818 318 202 8 32 342 43 349 6.65e-38 140
Msa0591790 AT2G03980.3 30.818 318 202 8 32 342 43 349 6.65e-38 140
Msa0591790 AT2G03980.1 30.818 318 202 8 32 342 43 349 6.65e-38 140
Msa0591790 AT2G03980.4 30.818 318 202 8 32 342 43 349 6.65e-38 140
Msa0591790 AT1G53920.1 27.949 390 245 12 1 366 7 384 1.19e-36 137
Msa0591790 AT1G75920.3 28.655 342 193 8 15 348 6 304 7.24e-36 133
Msa0591790 AT2G31550.1 32.701 211 135 4 139 346 2 208 7.90e-36 130
Msa0591790 AT1G75920.4 27.852 298 191 7 58 348 27 307 5.73e-34 128
Msa0591790 AT1G56670.1 28.142 366 215 12 12 349 12 357 1.08e-31 123
Msa0591790 AT1G54030.1 29.619 341 209 14 30 366 50 363 9.53e-31 121
Msa0591790 AT1G09390.1 29.086 361 214 12 14 349 11 354 3.07e-29 116
Msa0591790 AT1G53940.1 30.797 276 167 12 32 297 39 300 6.48e-29 114
Msa0591790 AT5G45910.1 29.815 379 215 18 5 350 4 364 3.76e-27 110
Msa0591790 AT3G62280.1 28.363 342 205 13 36 359 40 359 4.54e-27 110
Msa0591790 AT5G14450.1 27.273 374 224 14 9 350 16 373 1.28e-26 109
Msa0591790 AT4G01130.1 26.790 377 221 15 13 354 15 371 6.58e-25 104
Msa0591790 AT1G54790.3 26.984 378 225 14 5 350 6 364 1.19e-24 103
Msa0591790 AT3G26430.1 28.895 353 199 15 32 350 31 365 1.72e-24 103
Msa0591790 AT3G14220.1 25.069 363 243 12 13 365 9 352 9.64e-24 101
Msa0591790 AT3G09930.2 28.060 335 200 14 25 343 32 341 1.24e-23 100
Msa0591790 AT3G09930.1 28.060 335 200 14 25 343 32 341 1.24e-23 100
Msa0591790 AT3G27950.1 27.457 346 206 10 32 351 32 358 1.48e-23 100
Msa0591790 AT3G05180.1 27.794 349 206 13 32 350 36 368 2.68e-23 100
Msa0591790 AT4G16233.1 36.000 125 77 2 240 363 5 127 3.95e-23 94.0
Msa0591790 AT1G54790.1 27.557 352 199 15 34 350 33 363 5.99e-23 99.4
Msa0591790 AT1G31550.2 29.275 386 222 19 12 366 14 379 2.19e-22 97.8
Msa0591790 AT1G67830.1 26.944 360 215 15 25 352 23 366 3.34e-22 97.1
Msa0591790 AT2G04020.1 32.673 202 123 4 32 229 43 235 9.18e-22 94.0
Msa0591790 AT2G04020.2 32.558 215 129 5 32 239 43 248 9.34e-22 95.1
Msa0591790 AT1G54000.1 25.613 367 231 14 15 363 12 354 1.03e-21 95.9
Msa0591790 AT1G54010.1 26.016 369 229 15 15 364 12 355 3.67e-21 94.4
Msa0591790 AT1G28670.1 28.883 367 222 15 12 350 10 365 4.28e-21 94.0
Msa0591790 AT1G56670.2 27.451 306 179 11 12 294 12 297 9.68e-21 91.7
Msa0591790 AT1G28570.1 28.371 356 219 18 31 363 33 375 1.18e-20 92.8
Msa0591790 AT5G03610.1 25.776 322 205 12 34 343 45 344 1.67e-20 92.0
Msa0591790 AT4G16220.1 47.321 112 56 2 13 123 11 120 2.07e-20 89.7
Msa0591790 AT1G28660.1 29.730 370 214 16 12 350 10 364 5.87e-20 90.9
Msa0591790 AT1G54020.2 25.000 348 235 11 21 364 22 347 7.08e-20 90.5
Msa0591790 AT1G28650.1 28.415 366 220 16 14 350 14 366 1.93e-19 89.4
Msa0591790 AT3G14210.1 26.801 347 215 12 32 364 36 357 2.06e-19 89.4
Msa0591790 AT1G28640.1 28.686 373 216 19 12 351 10 365 2.19e-19 89.0
Msa0591790 AT1G54030.2 28.629 248 152 9 30 274 50 275 3.99e-19 87.4
Msa0591790 AT3G48460.1 25.872 344 210 14 34 351 40 364 1.03e-18 87.0
Msa0591790 AT4G01130.3 26.599 297 171 11 93 354 1 285 1.10e-18 85.9
Msa0591790 AT1G54790.2 25.661 378 199 16 34 350 33 389 6.79e-18 85.1
Msa0591790 AT1G28590.1 25.956 366 239 15 7 350 10 365 4.09e-16 79.7
Msa0591790 AT4G01130.2 26.645 304 181 13 13 294 15 298 9.06e-16 77.8
Msa0591790 AT3G62280.2 28.195 266 158 10 36 286 40 287 1.60e-15 76.6
Msa0591790 AT2G36325.1 25.278 360 215 14 9 343 16 346 1.89e-12 68.2

Find 94 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGGGATCTTTATGCATTT+TGG 0.100711 4_2:+16641559 Msa0591790:CDS
CATTCCCACCTAAAGTTATT+AGG 0.124247 4_2:-16637983 None:intergenic
CTTCTAACTTGTGCCCTAAT+AGG 0.217615 4_2:+16641541 Msa0591790:CDS
ATTGTATTCTTGAACGTTTA+AGG 0.219399 4_2:+16641793 Msa0591790:three_prime_UTR
AATGCATAAAGATCCCTATT+AGG 0.244612 4_2:-16641555 None:intergenic
AATTCATCATCATTATTATT+AGG 0.246629 4_2:-16641700 None:intergenic
AATCAACTCAATGCTGAAAT+TGG 0.265479 4_2:+16639556 Msa0591790:CDS
ATAAGTGTACTAAGATTATA+TGG 0.279256 4_2:-16641660 None:intergenic
TTTATCAACGATTAGTCTAT+TGG 0.279659 4_2:-16641607 None:intergenic
CACTTATTGCTATGGATTCT+AGG 0.292361 4_2:+16641676 Msa0591790:CDS
ACTGTTTAAAGTATGCTAAT+TGG 0.292401 4_2:-16637893 None:intergenic
CATACAGAATCTATATGAAT+TGG 0.299167 4_2:+16639390 Msa0591790:intron
CGTGCTGATTCATATCCTTA+TGG 0.309899 4_2:+16636539 Msa0591790:CDS
GATGGTGAAAGGTTGCTTAA+TGG 0.313083 4_2:+16636856 Msa0591790:CDS
CAGAGGGTTAGCGCACTAAT+TGG 0.316203 4_2:+16637921 Msa0591790:CDS
TCTCAAACTCATAGAGCTTC+TGG 0.319164 4_2:+16636569 Msa0591790:CDS
TCAAGCTCTGGACTCAAATA+TGG 0.322479 4_2:-16636835 None:intergenic
CAATAAACTGCAAAGATCAT+AGG 0.328879 4_2:-16641774 None:intergenic
ATTCCCACCTAAAGTTATTA+GGG 0.330551 4_2:-16637982 None:intergenic
TGAGTATCGCAAAATTCTTA+TGG 0.332687 4_2:+16638091 Msa0591790:CDS
GCATTAACCCTAATAACTTT+AGG 0.343222 4_2:+16637975 Msa0591790:CDS
ATTGGGAGCAAGAAGAGTTT+TGG 0.351874 4_2:+16639408 Msa0591790:CDS
GGTGATTCTCTTGTGGATAA+TGG 0.360020 4_2:+16636488 Msa0591790:CDS
TTCTAACTTGTGCCCTAATA+GGG 0.362728 4_2:+16641542 Msa0591790:CDS
TCACCACTCACTAGCAAGTT+GGG 0.365485 4_2:+16636338 None:intergenic
TTGAAGGAATAATATTCATT+TGG 0.368127 4_2:-16636394 None:intergenic
CTGTTTAAAGTATGCTAATT+GGG 0.373885 4_2:-16637892 None:intergenic
ATGCATAAAGATCCCTATTA+GGG 0.388461 4_2:-16641554 None:intergenic
GCATAGATGAAGACATGATT+AGG 0.388507 4_2:-16639583 None:intergenic
TCTAATGCTTCATTCCTATA+GGG 0.402387 4_2:+16641738 Msa0591790:three_prime_UTR
AGGTTGTGTGCCAGCAGAAT+TGG 0.403582 4_2:+16639450 Msa0591790:CDS
AAATGAGCACTCAACTAATA+AGG 0.407140 4_2:-16636622 None:intergenic
ATGCTAATTGGGCAGTAATT+CGG 0.407503 4_2:-16637881 None:intergenic
TTGGCTATGCAAGGAAGAAA+TGG 0.409678 4_2:+16639469 Msa0591790:CDS
AAATGCCTTTGCTATGCATT+TGG 0.417717 4_2:+16639606 Msa0591790:CDS
ATCTAATGCTTCATTCCTAT+AGG 0.432403 4_2:+16641737 Msa0591790:three_prime_UTR
ATGAGGAAGACAACATAATC+AGG 0.437834 4_2:-16638065 None:intergenic
AGTCTATTGGCTCTTTCTGA+TGG 0.442836 4_2:-16641594 None:intergenic
GCTCTTTCTGATGGATGAAA+GGG 0.446836 4_2:-16641585 None:intergenic
TCTTAGTACACTTATTGCTA+TGG 0.450346 4_2:+16641668 Msa0591790:CDS
ATTATATGGGTGCATGTAAT+CGG 0.455255 4_2:-16641646 None:intergenic
TATTTGAGTCCAGAGCTTGA+TGG 0.458469 4_2:+16636838 Msa0591790:CDS
CTCACCACTCACTAGCAAGT+TGG 0.459599 4_2:+16636337 None:intergenic
GGACTCAAATATGGTAATGT+AGG 0.461253 4_2:-16636826 None:intergenic
GGCTCTTTCTGATGGATGAA+AGG 0.468116 4_2:-16641586 None:intergenic
GTCAGGCATGTTGAGGCCAT+TGG 0.468967 4_2:-16636600 None:intergenic
ATCGTTGATAAATTTATGAC+TGG 0.473147 4_2:+16641618 Msa0591790:CDS
AAGAGCATATTCACGAGATC+TGG 0.473248 4_2:-16638042 None:intergenic
GGTTACAACCACGACCCTAT+AGG 0.485545 4_2:-16641752 None:intergenic
ATACAGAATCTATATGAATT+GGG 0.488950 4_2:+16639391 Msa0591790:intron
CATAGTCCAACTCCATTGTA+TGG 0.492410 4_2:-16641510 None:intergenic
CCTTGCATAGCCAATTCTGC+TGG 0.494918 4_2:-16639460 None:intergenic
TAATCAATTGAACAAGTTGA+GGG 0.498361 4_2:-16639534 None:intergenic
GCTTCTGGTCGTTTCTCCAA+TGG 0.503907 4_2:+16636584 Msa0591790:CDS
GTTTGAGAATCAATTCCATA+AGG 0.506762 4_2:-16636554 None:intergenic
AACACACAAAGAAATATTGA+AGG 0.510102 4_2:-16636410 None:intergenic
TTAATCAATTGAACAAGTTG+AGG 0.511859 4_2:-16639535 None:intergenic
AATAAACTGCAAAGATCATA+GGG 0.521338 4_2:-16641773 None:intergenic
TTAACCCTAATAACTTTAGG+TGG 0.521401 4_2:+16637978 Msa0591790:CDS
CAACTCAATGCTGAAATTGG+TGG 0.521897 4_2:+16639559 Msa0591790:CDS
TTAGGGCACAAGTTAGAAGC+TGG 0.527870 4_2:-16641537 None:intergenic
GTTAGAGACATTAATTCCAA+TGG 0.529094 4_2:+16636361 Msa0591790:exon
AACCTTTCACCATCAAGCTC+TGG 0.531953 4_2:-16636847 None:intergenic
AGCACTCAACTAATAAGGTC+AGG 0.533862 4_2:-16636617 None:intergenic
CAGCACGAGCAGTAGTAGCT+AGG 0.535195 4_2:-16636523 None:intergenic
TTCACGAGATCTGGCTGAGT+AGG 0.549249 4_2:-16638033 None:intergenic
GCTTCATTCCTATAGGGTCG+TGG 0.549624 4_2:+16641744 Msa0591790:three_prime_UTR
CAAGGACCATACAATGGAGT+TGG 0.550513 4_2:+16641504 Msa0591790:CDS
GTTTCTAATCCACAAGCATA+CGG 0.553825 4_2:+16639634 Msa0591790:CDS
GTGACAGGAACGGGACCACT+AGG 0.554470 4_2:+16639430 Msa0591790:CDS
TTAGTGCGCTAACCCTCTGC+TGG 0.554769 4_2:-16637917 None:intergenic
AAACATGCATGTTGTGGTCA+AGG 0.555677 4_2:+16641486 Msa0591790:CDS
GTGTTGATCACCTTGAGCAT+TGG 0.558772 4_2:+16636428 Msa0591790:CDS
TCACGAGATCTGGCTGAGTA+GGG 0.559568 4_2:-16638032 None:intergenic
TTGTTGAACACCAATGCTCA+AGG 0.567686 4_2:-16636438 None:intergenic
GGAAATATACCGTATGCTTG+TGG 0.571755 4_2:-16639643 None:intergenic
TGTGTTTGGTGATTCTCTTG+TGG 0.580293 4_2:+16636481 Msa0591790:CDS
TAAGTGTACTAAGATTATAT+GGG 0.583474 4_2:-16641659 None:intergenic
AAGTTAGTAGCTGTTTGAAG+AGG 0.588986 4_2:-16639505 None:intergenic
CTCTTTCTGATGGATGAAAG+GGG 0.589840 4_2:-16641584 None:intergenic
CCAGCAGAATTGGCTATGCA+AGG 0.594783 4_2:+16639460 Msa0591790:CDS
TAACCCTAATAACTTTAGGT+GGG 0.599439 4_2:+16637979 Msa0591790:CDS
ATTGGAATTCTCAATGACAC+TGG 0.602237 4_2:+16636901 Msa0591790:CDS
CGCACTAATTGGAGAAAGTG+AGG 0.612101 4_2:+16637932 Msa0591790:CDS
GTCCAGAGCTTGATGGTGAA+AGG 0.614928 4_2:+16636845 Msa0591790:CDS
GAAATCCAAATGCATAGCAA+AGG 0.615273 4_2:-16639611 None:intergenic
TAATAAGGTCAGGCATGTTG+AGG 0.615842 4_2:-16636607 None:intergenic
CACCACTCACTAGCAAGTTG+GGG 0.623635 4_2:+16636339 None:intergenic
CTTTAAACAGTACCAGCAGA+GGG 0.628353 4_2:+16637905 Msa0591790:CDS
CAAGGAAGAAATGGAGAGTG+TGG 0.633620 4_2:+16639478 Msa0591790:CDS
ACTTTAAACAGTACCAGCAG+AGG 0.640496 4_2:+16637904 Msa0591790:CDS
ACATCAAAACATGCATGTTG+TGG 0.666826 4_2:+16641480 Msa0591790:CDS
TGTGGTCAAGGACCATACAA+TGG 0.678040 4_2:+16641498 Msa0591790:CDS
TCTGCTGGCACACAACCTAG+TGG 0.689336 4_2:-16639445 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATCTAATATTTTGTTTT+AGG + chr4_2:16636742-16636761 Msa0591790:intron 10.0%
!!! AAATCTAATATTTTGTTTTA+GGG + chr4_2:16636743-16636762 Msa0591790:intron 10.0%
!! CAAAAAAAATAAATATTAGT+AGG - chr4_2:16638473-16638492 None:intergenic 10.0%
!!! TTTTTTTTTTTTGAAATGTT+GGG - chr4_2:16638910-16638929 None:intergenic 10.0%
!!! TTTTTTTTTTTTTGAAATGT+TGG - chr4_2:16638911-16638930 None:intergenic 10.0%
!!! TGAAATTTTTTTTTTTTATG+AGG + chr4_2:16639079-16639098 Msa0591790:intron 10.0%
!!! GAAATTTTTTTTTTTTATGA+GGG + chr4_2:16639080-16639099 Msa0591790:intron 10.0%
!! ATAATATAATAATTGATGTA+CGG - chr4_2:16639316-16639335 None:intergenic 10.0%
!!! TAGTTTTAAAAGTAATATTT+TGG - chr4_2:16640503-16640522 None:intergenic 10.0%
!! AAAAAAAAAAAAAAACTTGT+AGG + chr4_2:16640723-16640742 Msa0591790:intron 10.0%
!! TTGAATATAAATTCATTATA+TGG - chr4_2:16640805-16640824 None:intergenic 10.0%
!! AAATCTATATAATACATATA+TGG - chr4_2:16640956-16640975 None:intergenic 10.0%
!!! TCAAGAAAATCATTTTTTTA+AGG - chr4_2:16637108-16637127 None:intergenic 15.0%
!!! ATTGATTTTCAAATTTTTAG+TGG - chr4_2:16637338-16637357 None:intergenic 15.0%
!!! AAGACATGAAAATTAATTTT+TGG + chr4_2:16637365-16637384 Msa0591790:intron 15.0%
!! TTAGATAATTAGATACAAAT+AGG - chr4_2:16637836-16637855 None:intergenic 15.0%
!! AATGATGAAAATTAAACAAA+GGG - chr4_2:16638140-16638159 None:intergenic 15.0%
!! AAATGATGAAAATTAAACAA+AGG - chr4_2:16638141-16638160 None:intergenic 15.0%
!!! TTCAACTGTTTTTATATATA+TGG - chr4_2:16638344-16638363 None:intergenic 15.0%
!! TATATATAAAAACAGTTGAA+TGG + chr4_2:16638344-16638363 Msa0591790:intron 15.0%
!!! TTTTATAAGGAAAATACTAT+AGG - chr4_2:16638447-16638466 None:intergenic 15.0%
!!! TATTAGTAGGTTTTTTTATA+AGG - chr4_2:16638460-16638479 None:intergenic 15.0%
!! TTAGCTATATAGTTAATAAA+AGG + chr4_2:16638556-16638575 Msa0591790:intron 15.0%
!! TAGCTATATAGTTAATAAAA+GGG + chr4_2:16638557-16638576 Msa0591790:intron 15.0%
!!! AGAAGCTTTTTTATTTTTTT+TGG - chr4_2:16638849-16638868 None:intergenic 15.0%
!!! ATCTATTTTATTTCAATATG+TGG + chr4_2:16638978-16638997 Msa0591790:intron 15.0%
!!! ATGTGGATTTTAATATTAAT+CGG - chr4_2:16639216-16639235 None:intergenic 15.0%
!!! TTTTACTATATGGTTATATT+TGG - chr4_2:16639250-16639269 None:intergenic 15.0%
!!! AATTCAACATTTTTACTATA+TGG - chr4_2:16639260-16639279 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr4_2:16640527-16640546 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr4_2:16640526-16640545 Msa0591790:intron 15.0%
!!! AGGTTTTTTTTTTTTTTTGT+AGG + chr4_2:16640743-16640762 Msa0591790:intron 15.0%
!! ATATATTACTACTACATATT+AGG - chr4_2:16641242-16641261 None:intergenic 15.0%
!!! TTTTTGTTTTTTATATATGC+AGG + chr4_2:16641450-16641469 Msa0591790:intron 15.0%
!! AATTCATCATCATTATTATT+AGG - chr4_2:16641703-16641722 None:intergenic 15.0%
!! TGATGAATTTAAAAAAATCT+AGG + chr4_2:16641714-16641733 Msa0591790:three_prime_UTR 15.0%
!! TTGAAGGAATAATATTCATT+TGG - chr4_2:16636397-16636416 None:intergenic 20.0%
!!! TTCATCTACTATTTTGTTTT+AGG + chr4_2:16636703-16636722 Msa0591790:intron 20.0%
!!! TCATCTACTATTTTGTTTTA+GGG + chr4_2:16636704-16636723 Msa0591790:intron 20.0%
!! CTATAAATTATGAATGTGAT+AGG + chr4_2:16636784-16636803 Msa0591790:intron 20.0%
!! TAGTATAATATATGGAGTTT+AGG - chr4_2:16637050-16637069 None:intergenic 20.0%
!! AACTCCATATATTATACTAT+TGG + chr4_2:16637051-16637070 Msa0591790:intron 20.0%
!! TGTACCAATAGTATAATATA+TGG - chr4_2:16637058-16637077 None:intergenic 20.0%
!! GGAAGAAATCATATATATTT+AGG - chr4_2:16637087-16637106 None:intergenic 20.0%
!!! CCAAATTTCAGATAAAATTT+TGG - chr4_2:16637670-16637689 None:intergenic 20.0%
!!! CCAAAATTTTATCTGAAATT+TGG + chr4_2:16637667-16637686 Msa0591790:intron 20.0%
!! TCAATAAAAATTTACGACTT+TGG + chr4_2:16637700-16637719 Msa0591790:intron 20.0%
!!! TTTTGTGAACAACTATTATT+TGG + chr4_2:16638007-16638026 Msa0591790:CDS 20.0%
!!! TTTTTTTTTTGAGAGAAGTT+AGG - chr4_2:16638408-16638427 None:intergenic 20.0%
!! ATATTAAGAGTAATGTTAAC+CGG - chr4_2:16638738-16638757 None:intergenic 20.0%
!!! TTTTTTATTTTTTTTGGTGG+TGG - chr4_2:16638843-16638862 None:intergenic 20.0%
!!! AGCTTTTTTATTTTTTTTGG+TGG - chr4_2:16638846-16638865 None:intergenic 20.0%
!!! ACATTATCTTTAGAAATGTT+GGG - chr4_2:16638949-16638968 None:intergenic 20.0%
!!! AACATTATCTTTAGAAATGT+TGG - chr4_2:16638950-16638969 None:intergenic 20.0%
!!! TTTTTTTATGAGGGTTAATT+AGG + chr4_2:16639089-16639108 Msa0591790:intron 20.0%
!!! GGAATTAAATGTGTTTTTTT+TGG + chr4_2:16639110-16639129 Msa0591790:intron 20.0%
!! TAGATGAGTTAATTAATGTT+TGG + chr4_2:16639138-16639157 Msa0591790:intron 20.0%
!! ATTCAATCTTATAACACAAT+TGG - chr4_2:16639364-16639383 None:intergenic 20.0%
!! ATACAGAATCTATATGAATT+GGG + chr4_2:16639391-16639410 Msa0591790:intron 20.0%
!! GTATATTTCCAATCTTAATT+TGG + chr4_2:16639656-16639675 Msa0591790:intron 20.0%
!! AAGTTTAACCAAATTAAGAT+TGG - chr4_2:16639667-16639686 None:intergenic 20.0%
!! AAACACAAATATTCATCTAT+TGG + chr4_2:16639724-16639743 Msa0591790:intron 20.0%
!! TATGCTAGATTTAAATTGTT+AGG + chr4_2:16639781-16639800 Msa0591790:intron 20.0%
!!! TAATTAATATGTTTAGCTCT+TGG + chr4_2:16639887-16639906 Msa0591790:intron 20.0%
!! TTGATCTACTTTACATTTAA+TGG - chr4_2:16639990-16640009 None:intergenic 20.0%
!! AAAGTAGATCAATTATGATT+AGG + chr4_2:16639998-16640017 Msa0591790:intron 20.0%
!! AAGTAGATCAATTATGATTA+GGG + chr4_2:16639999-16640018 Msa0591790:intron 20.0%
!! GATTCAAATACTATGAAAAA+AGG - chr4_2:16640093-16640112 None:intergenic 20.0%
!!! TACTCAAACAAAAGTATATA+GGG - chr4_2:16640128-16640147 None:intergenic 20.0%
!!! ATACTCAAACAAAAGTATAT+AGG - chr4_2:16640129-16640148 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr4_2:16640440-16640459 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr4_2:16640517-16640536 Msa0591790:intron 20.0%
!! AATGATTAAGAGAAAGATAA+TGG - chr4_2:16640560-16640579 None:intergenic 20.0%
!! TTTGCAAAATCACAAAATAA+TGG - chr4_2:16640848-16640867 None:intergenic 20.0%
!! TGAATTTGTCGTAATTATAA+TGG + chr4_2:16640897-16640916 Msa0591790:intron 20.0%
!! TACTATATATTGAACCATAT+AGG - chr4_2:16641095-16641114 None:intergenic 20.0%
!! TAAGTGTACTAAGATTATAT+GGG - chr4_2:16641662-16641681 None:intergenic 20.0%
!! ATAAGTGTACTAAGATTATA+TGG - chr4_2:16641663-16641682 None:intergenic 20.0%
!!! ATTTGGTTTTTTTGTTCCAT+TGG - chr4_2:16636380-16636399 None:intergenic 25.0%
! AACACACAAAGAAATATTGA+AGG - chr4_2:16636413-16636432 None:intergenic 25.0%
! AAAATAGTAGATGAAAGCTA+GGG - chr4_2:16636698-16636717 None:intergenic 25.0%
! AATGTGATAGGTGAAAAAAT+TGG + chr4_2:16636796-16636815 Msa0591790:intron 25.0%
! ATGTGATAGGTGAAAAAATT+GGG + chr4_2:16636797-16636816 Msa0591790:intron 25.0%
!!! AATTTTTGGATCATACATGT+AGG + chr4_2:16637379-16637398 Msa0591790:intron 25.0%
!!! ATTTTTGGATCATACATGTA+GGG + chr4_2:16637380-16637399 Msa0591790:intron 25.0%
! CTTTGGTATAAAATGAAAAG+AGG + chr4_2:16637717-16637736 Msa0591790:intron 25.0%
! TCATTACACAGGTAAATTTA+GGG - chr4_2:16637777-16637796 None:intergenic 25.0%
! TTCATTACACAGGTAAATTT+AGG - chr4_2:16637778-16637797 None:intergenic 25.0%
!! ATTGATTTCTTTCATTACAC+AGG - chr4_2:16637788-16637807 None:intergenic 25.0%
!! CTGTTTAAAGTATGCTAATT+GGG - chr4_2:16637895-16637914 None:intergenic 25.0%
!! ACTGTTTAAAGTATGCTAAT+TGG - chr4_2:16637896-16637915 None:intergenic 25.0%
! GACTTTGACCAAATATATTA+GGG - chr4_2:16638320-16638339 None:intergenic 25.0%
! TGACTTTGACCAAATATATT+AGG - chr4_2:16638321-16638340 None:intergenic 25.0%
! TGAGTAAAGAACCTTTAAAT+TGG + chr4_2:16638495-16638514 Msa0591790:intron 25.0%
! GAGTAAAGAACCTTTAAATT+GGG + chr4_2:16638496-16638515 Msa0591790:intron 25.0%
! AATAAAAGGGTTATGTTAAC+CGG + chr4_2:16638570-16638589 Msa0591790:intron 25.0%
! CAAATATAGTAACATCACAT+TGG - chr4_2:16638689-16638708 None:intergenic 25.0%
! AACAATGCATAATATATGCA+AGG + chr4_2:16638798-16638817 Msa0591790:intron 25.0%
! TACTATATGGTTATATTTGG+TGG - chr4_2:16639247-16639266 None:intergenic 25.0%
! ATAATAATTGATGTACGGAT+TGG - chr4_2:16639311-16639330 None:intergenic 25.0%
! CATACAGAATCTATATGAAT+TGG + chr4_2:16639390-16639409 Msa0591790:intron 25.0%
!! TAATCAATTGAACAAGTTGA+GGG - chr4_2:16639537-16639556 None:intergenic 25.0%
! TTAATCAATTGAACAAGTTG+AGG - chr4_2:16639538-16639557 None:intergenic 25.0%
! TAGATTTAAATTGTTAGGTC+CGG + chr4_2:16639786-16639805 Msa0591790:intron 25.0%
! ATTAGATTATCCTAAGATCT+TGG + chr4_2:16639925-16639944 Msa0591790:intron 25.0%
! TTAGATTATCCTAAGATCTT+GGG + chr4_2:16639926-16639945 Msa0591790:intron 25.0%
! AGTAGATCAATTATGATTAG+GGG + chr4_2:16640000-16640019 Msa0591790:intron 25.0%
! TGAGTTAGTATCAAATTGAT+CGG - chr4_2:16640047-16640066 None:intergenic 25.0%
! GTTCAAGTGTCATAATTTAA+AGG + chr4_2:16640296-16640315 Msa0591790:intron 25.0%
!!! AGGGAGTAACATTTTATTTT+AGG - chr4_2:16640351-16640370 None:intergenic 25.0%
!! TATATTTTCTTGAACGAGTT+GGG - chr4_2:16640776-16640795 None:intergenic 25.0%
! AACATAATCCATTTGAATAG+TGG - chr4_2:16641163-16641182 None:intergenic 25.0%
! TATGTTGCAATCATGTTAAA+TGG + chr4_2:16641177-16641196 Msa0591790:intron 25.0%
! TTACTACTACATATTAGGAA+TGG - chr4_2:16641237-16641256 None:intergenic 25.0%
!!! AAATGTTTTTTCAATGAGCA+TGG - chr4_2:16641290-16641309 None:intergenic 25.0%
! ACCTAAACATCTAAGAAAAT+AGG + chr4_2:16641319-16641338 Msa0591790:intron 25.0%
!! ACCTATTTTCTTAGATGTTT+AGG - chr4_2:16641323-16641342 None:intergenic 25.0%
!!! TTTTTTCCACAAACTTTTGT+TGG + chr4_2:16641346-16641365 Msa0591790:intron 25.0%
!!! TTTATCAACGATTAGTCTAT+TGG - chr4_2:16641610-16641629 None:intergenic 25.0%
!! ATCGTTGATAAATTTATGAC+TGG + chr4_2:16641618-16641637 Msa0591790:CDS 25.0%
! AATAAACTGCAAAGATCATA+GGG - chr4_2:16641776-16641795 None:intergenic 25.0%
! ATTGTATTCTTGAACGTTTA+AGG + chr4_2:16641793-16641812 Msa0591790:three_prime_UTR 25.0%
!!! AAATGAGTTTTGTTGTTAAG+TGG + chr4_2:16641842-16641861 Msa0591790:three_prime_UTR 25.0%
GTTAGAGACATTAATTCCAA+TGG + chr4_2:16636361-16636380 Msa0591790:exon 30.0%
GTTTGAGAATCAATTCCATA+AGG - chr4_2:16636557-16636576 None:intergenic 30.0%
AAATGAGCACTCAACTAATA+AGG - chr4_2:16636625-16636644 None:intergenic 30.0%
CAAAATAGTAGATGAAAGCT+AGG - chr4_2:16636699-16636718 None:intergenic 30.0%
! AGTAGAATTTTCCTTTCACA+CGG + chr4_2:16636984-16637003 Msa0591790:intron 30.0%
CATGAGAAAATTAATTCCTG+TGG - chr4_2:16637013-16637032 None:intergenic 30.0%
CAATTACATTTAGCACACAT+GGG - chr4_2:16637496-16637515 None:intergenic 30.0%
GCATTAACCCTAATAACTTT+AGG + chr4_2:16637975-16637994 Msa0591790:CDS 30.0%
TTAACCCTAATAACTTTAGG+TGG + chr4_2:16637978-16637997 Msa0591790:CDS 30.0%
TAACCCTAATAACTTTAGGT+GGG + chr4_2:16637979-16637998 Msa0591790:CDS 30.0%
ATTCCCACCTAAAGTTATTA+GGG - chr4_2:16637985-16638004 None:intergenic 30.0%
! TGAGTATCGCAAAATTCTTA+TGG + chr4_2:16638091-16638110 Msa0591790:CDS 30.0%
! TAAACAAAGGGAAGTACATA+AGG - chr4_2:16638128-16638147 None:intergenic 30.0%
!! GTTGTTACATCACACTTTTT+GGG + chr4_2:16638271-16638290 Msa0591790:intron 30.0%
!!! CACTTTTTGGGTCATAATAT+AGG + chr4_2:16638283-16638302 Msa0591790:intron 30.0%
TGTATCAAAGCCCAATTTAA+AGG - chr4_2:16638509-16638528 None:intergenic 30.0%
ATGTAACGGTAAGATTCAAT+TGG + chr4_2:16639166-16639185 Msa0591790:intron 30.0%
! TATATGGTTATATTTGGTGG+TGG - chr4_2:16639244-16639263 None:intergenic 30.0%
ACACAATTGGTATGAATTGT+TGG - chr4_2:16639351-16639370 None:intergenic 30.0%
AATCAACTCAATGCTGAAAT+TGG + chr4_2:16639556-16639575 Msa0591790:CDS 30.0%
!! AAAAGTTTGTTACCTACCTA+GGG + chr4_2:16639849-16639868 Msa0591790:intron 30.0%
!! TTAATATGTTTAGCTCTTGG+TGG + chr4_2:16639890-16639909 Msa0591790:intron 30.0%
TTTGACTAAGTGTAGCTATT+AGG + chr4_2:16639962-16639981 Msa0591790:intron 30.0%
!! AAAGTATATAGGGTTAGTCT+AGG - chr4_2:16640118-16640137 None:intergenic 30.0%
! GTCACAATGAGTTGAATTTA+TGG - chr4_2:16640174-16640193 None:intergenic 30.0%
ACTCATTGTGACACAAATTA+TGG + chr4_2:16640182-16640201 Msa0591790:intron 30.0%
GACACAAATTATGGATTTCT+TGG + chr4_2:16640191-16640210 Msa0591790:intron 30.0%
!! GTGTAATGTAAGTGTTGAAT+AGG + chr4_2:16640256-16640275 Msa0591790:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr4_2:16640608-16640627 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr4_2:16640609-16640628 Msa0591790:intron 30.0%
! CTATATTTTCTTGAACGAGT+TGG - chr4_2:16640777-16640796 None:intergenic 30.0%
ACACCATTAGAAAAGTAAGA+TGG + chr4_2:16641020-16641039 Msa0591790:intron 30.0%
AATAATAGTCAAGATTCCAC+TGG + chr4_2:16641263-16641282 Msa0591790:intron 30.0%
ATGCATAAAGATCCCTATTA+GGG - chr4_2:16641557-16641576 None:intergenic 30.0%
AATGCATAAAGATCCCTATT+AGG - chr4_2:16641558-16641577 None:intergenic 30.0%
! ATAGGGATCTTTATGCATTT+TGG + chr4_2:16641559-16641578 Msa0591790:CDS 30.0%
! TAGGGATCTTTATGCATTTT+GGG + chr4_2:16641560-16641579 Msa0591790:CDS 30.0%
ATTATATGGGTGCATGTAAT+CGG - chr4_2:16641649-16641668 None:intergenic 30.0%
TCTTAGTACACTTATTGCTA+TGG + chr4_2:16641668-16641687 Msa0591790:CDS 30.0%
ATCTAATGCTTCATTCCTAT+AGG + chr4_2:16641737-16641756 Msa0591790:three_prime_UTR 30.0%
TCTAATGCTTCATTCCTATA+GGG + chr4_2:16641738-16641757 Msa0591790:three_prime_UTR 30.0%
CAATAAACTGCAAAGATCAT+AGG - chr4_2:16641777-16641796 None:intergenic 30.0%
!!! GCAAGAGCATTTTTTGTGTT+TGG + chr4_2:16636467-16636486 Msa0591790:CDS 35.0%
! GGACTCAAATATGGTAATGT+AGG - chr4_2:16636829-16636848 None:intergenic 35.0%
ATTGGAATTCTCAATGACAC+TGG + chr4_2:16636901-16636920 Msa0591790:CDS 35.0%
TAGATCCTCTCATAAATGAG+AGG - chr4_2:16637461-16637480 None:intergenic 35.0%
GCAATTACATTTAGCACACA+TGG - chr4_2:16637497-16637516 None:intergenic 35.0%
!! CTCAAAGTTTTGTACACGTA+CGG - chr4_2:16637551-16637570 None:intergenic 35.0%
! GAGGTACTACTACATAATGA+TGG + chr4_2:16637736-16637755 Msa0591790:intron 35.0%
ATGCTAATTGGGCAGTAATT+CGG - chr4_2:16637884-16637903 None:intergenic 35.0%
CATTCCCACCTAAAGTTATT+AGG - chr4_2:16637986-16638005 None:intergenic 35.0%
ATGAGGAAGACAACATAATC+AGG - chr4_2:16638068-16638087 None:intergenic 35.0%
! TTTTGCGATACTCAGAAATG+AGG - chr4_2:16638085-16638104 None:intergenic 35.0%
! AAAGGGAAGTACATAAGGAT+AGG - chr4_2:16638123-16638142 None:intergenic 35.0%
! CGTTGTTACATCACACTTTT+TGG + chr4_2:16638270-16638289 Msa0591790:intron 35.0%
CTCCTAAGCCCTAATATATT+TGG + chr4_2:16638309-16638328 Msa0591790:intron 35.0%
GACCAAATATATTAGGGCTT+AGG - chr4_2:16638314-16638333 None:intergenic 35.0%
GGTAAGAACACATTCAAAGT+TGG + chr4_2:16638365-16638384 Msa0591790:intron 35.0%
ACTATATTTGCTTCCGTAAC+CGG + chr4_2:16638699-16638718 Msa0591790:intron 35.0%
TGCATAATATATGCAAGGTC+TGG + chr4_2:16638803-16638822 Msa0591790:intron 35.0%
!!! TTATTTTTTTTGGTGGTGGC+CGG - chr4_2:16638839-16638858 None:intergenic 35.0%
AATGTTTGGCAAGCATGTAA+CGG + chr4_2:16639152-16639171 Msa0591790:intron 35.0%
TGTTGAAAGCAGCACATATT+AGG + chr4_2:16639190-16639209 Msa0591790:intron 35.0%
!! TACGGATTGGAAGAAATAGA+GGG - chr4_2:16639298-16639317 None:intergenic 35.0%
AAGTTAGTAGCTGTTTGAAG+AGG - chr4_2:16639508-16639527 None:intergenic 35.0%
GCATAGATGAAGACATGATT+AGG - chr4_2:16639586-16639605 None:intergenic 35.0%
! AAATGCCTTTGCTATGCATT+TGG + chr4_2:16639606-16639625 Msa0591790:CDS 35.0%
GAAATCCAAATGCATAGCAA+AGG - chr4_2:16639614-16639633 None:intergenic 35.0%
GTTTCTAATCCACAAGCATA+CGG + chr4_2:16639634-16639653 Msa0591790:CDS 35.0%
! CTAGGTAGGTAACAAACTTT+TGG - chr4_2:16639850-16639869 None:intergenic 35.0%
!! CAAAAGTTTGTTACCTACCT+AGG + chr4_2:16639848-16639867 Msa0591790:intron 35.0%
! CTCATTCGATTCAAAGTGTT+TGG + chr4_2:16640063-16640082 Msa0591790:intron 35.0%
! TTCGATTCAAAGTGTTTGGT+TGG + chr4_2:16640067-16640086 Msa0591790:intron 35.0%
TGTGAATGTAGCTTAAGACA+TGG + chr4_2:16640225-16640244 Msa0591790:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr4_2:16640374-16640393 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr4_2:16640474-16640493 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr4_2:16640478-16640497 None:intergenic 35.0%
TGGTAGTCGTCTACATTAAT+GGG - chr4_2:16640828-16640847 None:intergenic 35.0%
ATGGTAGTCGTCTACATTAA+TGG - chr4_2:16640829-16640848 None:intergenic 35.0%
!!! CTTTTCTAATGGTGTTACAG+TGG - chr4_2:16641015-16641034 None:intergenic 35.0%
!! TGGCCATCTTACTTTTCTAA+TGG - chr4_2:16641026-16641045 None:intergenic 35.0%
ATCCATTTGAATAGTGGTTG+TGG - chr4_2:16641157-16641176 None:intergenic 35.0%
TGCAATCATGTTAAATGGTG+TGG + chr4_2:16641182-16641201 Msa0591790:intron 35.0%
GCAATCATGTTAAATGGTGT+GGG + chr4_2:16641183-16641202 Msa0591790:intron 35.0%
CAATCATGTTAAATGGTGTG+GGG + chr4_2:16641184-16641203 Msa0591790:intron 35.0%
AATCATGTTAAATGGTGTGG+GGG + chr4_2:16641185-16641204 Msa0591790:intron 35.0%
ACTATGCCAACAAAAGTTTG+TGG - chr4_2:16641355-16641374 None:intergenic 35.0%
ACATCAAAACATGCATGTTG+TGG + chr4_2:16641480-16641499 Msa0591790:CDS 35.0%
! TTCTAACTTGTGCCCTAATA+GGG + chr4_2:16641542-16641561 Msa0591790:CDS 35.0%
CACTTATTGCTATGGATTCT+AGG + chr4_2:16641676-16641695 Msa0591790:CDS 35.0%
TTGTTGAACACCAATGCTCA+AGG - chr4_2:16636441-16636460 None:intergenic 40.0%
! TGTGTTTGGTGATTCTCTTG+TGG + chr4_2:16636481-16636500 Msa0591790:CDS 40.0%
GGTGATTCTCTTGTGGATAA+TGG + chr4_2:16636488-16636507 Msa0591790:CDS 40.0%
!! CGTGCTGATTCATATCCTTA+TGG + chr4_2:16636539-16636558 Msa0591790:CDS 40.0%
TCTCAAACTCATAGAGCTTC+TGG + chr4_2:16636569-16636588 Msa0591790:CDS 40.0%
TAATAAGGTCAGGCATGTTG+AGG - chr4_2:16636610-16636629 None:intergenic 40.0%
AGCACTCAACTAATAAGGTC+AGG - chr4_2:16636620-16636639 None:intergenic 40.0%
!! TCAAGCTCTGGACTCAAATA+TGG - chr4_2:16636838-16636857 None:intergenic 40.0%
TATTTGAGTCCAGAGCTTGA+TGG + chr4_2:16636838-16636857 Msa0591790:CDS 40.0%
GATGGTGAAAGGTTGCTTAA+TGG + chr4_2:16636856-16636875 Msa0591790:CDS 40.0%
! GTGCTAATTTTGCTTCTGCT+GGG + chr4_2:16636878-16636897 Msa0591790:CDS 40.0%
! AATTTTGCTTCTGCTGGGAT+TGG + chr4_2:16636883-16636902 Msa0591790:CDS 40.0%
TGTGACCTCTCATTTATGAG+AGG + chr4_2:16637453-16637472 Msa0591790:intron 40.0%
ACTTTAAACAGTACCAGCAG+AGG + chr4_2:16637904-16637923 Msa0591790:CDS 40.0%
CTTTAAACAGTACCAGCAGA+GGG + chr4_2:16637905-16637924 Msa0591790:CDS 40.0%
! AAGAGCATATTCACGAGATC+TGG - chr4_2:16638045-16638064 None:intergenic 40.0%
TTTCCTTAACCAATGCTCCA+GGG - chr4_2:16638599-16638618 None:intergenic 40.0%
! AAGGTCTGGAGTTAAAATCC+CGG + chr4_2:16638817-16638836 Msa0591790:intron 40.0%
!!! TATTTTTTTTGGTGGTGGCC+GGG - chr4_2:16638838-16638857 None:intergenic 40.0%
!! ATTTGGTGGTGGACTTTATG+TGG - chr4_2:16639233-16639252 None:intergenic 40.0%
!! GTACGGATTGGAAGAAATAG+AGG - chr4_2:16639299-16639318 None:intergenic 40.0%
! ATTGGGAGCAAGAAGAGTTT+TGG + chr4_2:16639408-16639427 Msa0591790:CDS 40.0%
!! AAGAGTTTTGGTGACAGGAA+CGG + chr4_2:16639420-16639439 Msa0591790:CDS 40.0%
TTGGCTATGCAAGGAAGAAA+TGG + chr4_2:16639469-16639488 Msa0591790:CDS 40.0%
CAACTCAATGCTGAAATTGG+TGG + chr4_2:16639559-16639578 Msa0591790:CDS 40.0%
GGAAATATACCGTATGCTTG+TGG - chr4_2:16639646-16639665 None:intergenic 40.0%
GCTTCTAACTAACATGACCA+GGG - chr4_2:16639812-16639831 None:intergenic 40.0%
TGCTTCTAACTAACATGACC+AGG - chr4_2:16639813-16639832 None:intergenic 40.0%
TTTGTTACCTACCTAGGGTT+TGG + chr4_2:16639854-16639873 Msa0591790:intron 40.0%
ATAAAGACCAAACCCTAGGT+AGG - chr4_2:16639864-16639883 None:intergenic 40.0%
AGACATAAAGACCAAACCCT+AGG - chr4_2:16639868-16639887 None:intergenic 40.0%
ATCCTAAGATCTTGGGATAG+TGG + chr4_2:16639933-16639952 Msa0591790:intron 40.0%
ATCCACTATCCCAAGATCTT+AGG - chr4_2:16639938-16639957 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr4_2:16640613-16640632 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr4_2:16640475-16640494 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr4_2:16640613-16640632 Msa0591790:intron 40.0%
AACCTAACCACGCAATATCT+TGG + chr4_2:16640693-16640712 Msa0591790:intron 40.0%
ATCCAAGATATTGCGTGGTT+AGG - chr4_2:16640698-16640717 None:intergenic 40.0%
GTCAAATCCAAGATATTGCG+TGG - chr4_2:16640703-16640722 None:intergenic 40.0%
TAGAAAAGTAAGATGGCCAC+CGG + chr4_2:16641027-16641046 Msa0591790:intron 40.0%
GTCCACAACCACTATTCAAA+TGG + chr4_2:16641152-16641171 Msa0591790:intron 40.0%
!! TGTGGGGGAAATTGACTTTT+GGG + chr4_2:16641200-16641219 Msa0591790:intron 40.0%
!! AATTGACTTTTGGGGACCAA+AGG + chr4_2:16641209-16641228 Msa0591790:intron 40.0%
!! ATTGACTTTTGGGGACCAAA+GGG + chr4_2:16641210-16641229 Msa0591790:intron 40.0%
CATATTAGGAATGGTCCCTT+TGG - chr4_2:16641228-16641247 None:intergenic 40.0%
AAACATGCATGTTGTGGTCA+AGG + chr4_2:16641486-16641505 Msa0591790:CDS 40.0%
CATAGTCCAACTCCATTGTA+TGG - chr4_2:16641513-16641532 None:intergenic 40.0%
! CTTCTAACTTGTGCCCTAAT+AGG + chr4_2:16641541-16641560 Msa0591790:CDS 40.0%
! CTCTTTCTGATGGATGAAAG+GGG - chr4_2:16641587-16641606 None:intergenic 40.0%
! GCTCTTTCTGATGGATGAAA+GGG - chr4_2:16641588-16641607 None:intergenic 40.0%
!! AGTCTATTGGCTCTTTCTGA+TGG - chr4_2:16641597-16641616 None:intergenic 40.0%
! GTGTTGATCACCTTGAGCAT+TGG + chr4_2:16636428-16636447 Msa0591790:CDS 45.0%
AACCTTTCACCATCAAGCTC+TGG - chr4_2:16636850-16636869 None:intergenic 45.0%
! GGTGCTAATTTTGCTTCTGC+TGG + chr4_2:16636877-16636896 Msa0591790:CDS 45.0%
CGCACTAATTGGAGAAAGTG+AGG + chr4_2:16637932-16637951 Msa0591790:CDS 45.0%
TTCCTTAACCAATGCTCCAG+GGG - chr4_2:16638598-16638617 None:intergenic 45.0%
GTTTCCTTAACCAATGCTCC+AGG - chr4_2:16638600-16638619 None:intergenic 45.0%
CCAACTGAGCTAAGCTCAAA+AGG - chr4_2:16638775-16638794 None:intergenic 45.0%
! CCTTTTGAGCTTAGCTCAGT+TGG + chr4_2:16638772-16638791 Msa0591790:intron 45.0%
!! GCAAGAAGAGTTTTGGTGAC+AGG + chr4_2:16639415-16639434 Msa0591790:CDS 45.0%
!! AGAGTTTTGGTGACAGGAAC+GGG + chr4_2:16639421-16639440 Msa0591790:CDS 45.0%
CAAGGAAGAAATGGAGAGTG+TGG + chr4_2:16639478-16639497 Msa0591790:CDS 45.0%
!! ATGTTTAGCTCTTGGTGGCT+AGG + chr4_2:16639895-16639914 Msa0591790:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr4_2:16640612-16640631 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr4_2:16640612-16640631 Msa0591790:intron 45.0%
GTGGTTAGGTTTGAGTCAAG+TGG - chr4_2:16640684-16640703 None:intergenic 45.0%
! TGAATAGTGGTTGTGGACTG+TGG - chr4_2:16641150-16641169 None:intergenic 45.0%
!! GTGTGGGGGAAATTGACTTT+TGG + chr4_2:16641199-16641218 Msa0591790:intron 45.0%
!! GTGGGGGAAATTGACTTTTG+GGG + chr4_2:16641201-16641220 Msa0591790:intron 45.0%
TTTCAATGAGCATGGTCCAG+TGG - chr4_2:16641282-16641301 None:intergenic 45.0%
TGTGGTCAAGGACCATACAA+TGG + chr4_2:16641498-16641517 Msa0591790:CDS 45.0%
CAAGGACCATACAATGGAGT+TGG + chr4_2:16641504-16641523 Msa0591790:CDS 45.0%
TTAGGGCACAAGTTAGAAGC+TGG - chr4_2:16641540-16641559 None:intergenic 45.0%
! GGCTCTTTCTGATGGATGAA+AGG - chr4_2:16641589-16641608 None:intergenic 45.0%
!!! TAATTTAAAATTTTCTTTTT+TGG - chr4_2:16638622-16638641 None:intergenic 5.0%
GCTTCTGGTCGTTTCTCCAA+TGG + chr4_2:16636584-16636603 Msa0591790:CDS 50.0%
!! GTCCAGAGCTTGATGGTGAA+AGG + chr4_2:16636845-16636864 Msa0591790:CDS 50.0%
TCCTTTCACACGGTAACCAC+AGG + chr4_2:16636994-16637013 Msa0591790:intron 50.0%
TCCTGTGGTTACCGTGTGAA+AGG - chr4_2:16636998-16637017 None:intergenic 50.0%
! CAGAGGGTTAGCGCACTAAT+TGG + chr4_2:16637921-16637940 Msa0591790:CDS 50.0%
TCACGAGATCTGGCTGAGTA+GGG - chr4_2:16638035-16638054 None:intergenic 50.0%
TTCACGAGATCTGGCTGAGT+AGG - chr4_2:16638036-16638055 None:intergenic 50.0%
AATGTTAACCGGTGCCTCTG+AGG - chr4_2:16638727-16638746 None:intergenic 50.0%
AGGTTGTGTGCCAGCAGAAT+TGG + chr4_2:16639450-16639469 Msa0591790:CDS 50.0%
CCTTGCATAGCCAATTCTGC+TGG - chr4_2:16639463-16639482 None:intergenic 50.0%
CCAGCAGAATTGGCTATGCA+AGG + chr4_2:16639460-16639479 Msa0591790:CDS 50.0%
TAAATTGTTAGGTCCGGCCC+TGG + chr4_2:16639792-16639811 Msa0591790:intron 50.0%
CTAACTAACATGACCAGGGC+CGG - chr4_2:16639808-16639827 None:intergenic 50.0%
!! ATTAGGGGTGCTTGTGCAGA+TGG + chr4_2:16640015-16640034 Msa0591790:intron 50.0%
!! TTAGGGGTGCTTGTGCAGAT+GGG + chr4_2:16640016-16640035 Msa0591790:intron 50.0%
TGTGTGTCCGTAGAGCTCAT+GGG + chr4_2:16641063-16641082 Msa0591790:intron 50.0%
GCTTCATTCCTATAGGGTCG+TGG + chr4_2:16641744-16641763 Msa0591790:three_prime_UTR 50.0%
GGTTACAACCACGACCCTAT+AGG - chr4_2:16641755-16641774 None:intergenic 50.0%
CAGCACGAGCAGTAGTAGCT+AGG - chr4_2:16636526-16636545 None:intergenic 55.0%
GTCAGGCATGTTGAGGCCAT+TGG - chr4_2:16636603-16636622 None:intergenic 55.0%
TTAGTGCGCTAACCCTCTGC+TGG - chr4_2:16637920-16637939 None:intergenic 55.0%
GTTATGTTAACCGGTGCCCC+TGG + chr4_2:16638579-16638598 Msa0591790:intron 55.0%
!! TGCCCCTGGAGCATTGGTTA+AGG + chr4_2:16638593-16638612 Msa0591790:intron 55.0%
TCTGCTGGCACACAACCTAG+TGG - chr4_2:16639448-16639467 None:intergenic 55.0%
TAAGATGGCCACCGGAGCAA+TGG + chr4_2:16641035-16641054 Msa0591790:intron 55.0%
CACACACAAGGCCATTGCTC+CGG - chr4_2:16641049-16641068 None:intergenic 55.0%
GAGCTCTACGGACACACACA+AGG - chr4_2:16641061-16641080 None:intergenic 55.0%
GTGTGTGTCCGTAGAGCTCA+TGG + chr4_2:16641062-16641081 Msa0591790:intron 55.0%
TGTCCGTAGAGCTCATGGGT+TGG + chr4_2:16641067-16641086 Msa0591790:intron 55.0%
GTCCGTAGAGCTCATGGGTT+GGG + chr4_2:16641068-16641087 Msa0591790:intron 55.0%
! TCCGTAGAGCTCATGGGTTG+GGG + chr4_2:16641069-16641088 Msa0591790:intron 55.0%
!! CTCATGGGTTGGGGCCTATA+TGG + chr4_2:16641078-16641097 Msa0591790:intron 55.0%
! AACCAATGCTCCAGGGGCAC+CGG - chr4_2:16638592-16638611 None:intergenic 60.0%
TTCCGTAACCGGTGCCTCAG+AGG + chr4_2:16638710-16638729 Msa0591790:intron 60.0%
!! TGCCTCTGAGGCACCGGTTA+CGG - chr4_2:16638715-16638734 None:intergenic 60.0%
GTGACAGGAACGGGACCACT+AGG + chr4_2:16639430-16639449 Msa0591790:CDS 60.0%
ACACAAGGCCATTGCTCCGG+TGG - chr4_2:16641046-16641065 None:intergenic 60.0%
GCCCCAACCCATGAGCTCTA+CGG - chr4_2:16641073-16641092 None:intergenic 60.0%
AACCGGTGCCCCTGGAGCAT+TGG + chr4_2:16638587-16638606 Msa0591790:intron 65.0%
! AACCGGTGCCTCAGAGGCAC+CGG + chr4_2:16638716-16638735 Msa0591790:intron 65.0%
!! AACCGGTGCCTCTGAGGCAC+CGG - chr4_2:16638721-16638740 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 16636345 16641890 16636345 ID=Msa0591790;Name=Msa0591790
chr4_2 mRNA 16636345 16641890 16636345 ID=Msa0591790-mRNA-1;Parent=Msa0591790;Name=Msa0591790-mRNA-1;_AED=0.20;_eAED=0.20;_QI=35|1|1|1|1|1|5|186|370
chr4_2 exon 16636345 16636629 16636345 ID=Msa0591790-mRNA-1:exon:4786;Parent=Msa0591790-mRNA-1
chr4_2 exon 16636806 16636933 16636806 ID=Msa0591790-mRNA-1:exon:4787;Parent=Msa0591790-mRNA-1
chr4_2 exon 16637870 16638112 16637870 ID=Msa0591790-mRNA-1:exon:4788;Parent=Msa0591790-mRNA-1
chr4_2 exon 16639397 16639655 16639397 ID=Msa0591790-mRNA-1:exon:4789;Parent=Msa0591790-mRNA-1
chr4_2 exon 16641472 16641890 16641472 ID=Msa0591790-mRNA-1:exon:4790;Parent=Msa0591790-mRNA-1
chr4_2 five_prime_UTR 16636345 16636379 16636345 ID=Msa0591790-mRNA-1:five_prime_utr;Parent=Msa0591790-mRNA-1
chr4_2 CDS 16636380 16636629 16636380 ID=Msa0591790-mRNA-1:cds;Parent=Msa0591790-mRNA-1
chr4_2 CDS 16636806 16636933 16636806 ID=Msa0591790-mRNA-1:cds;Parent=Msa0591790-mRNA-1
chr4_2 CDS 16637870 16638112 16637870 ID=Msa0591790-mRNA-1:cds;Parent=Msa0591790-mRNA-1
chr4_2 CDS 16639397 16639655 16639397 ID=Msa0591790-mRNA-1:cds;Parent=Msa0591790-mRNA-1
chr4_2 CDS 16641472 16641704 16641472 ID=Msa0591790-mRNA-1:cds;Parent=Msa0591790-mRNA-1
chr4_2 three_prime_UTR 16641705 16641890 16641705 ID=Msa0591790-mRNA-1:three_prime_utr;Parent=Msa0591790-mRNA-1
Gene Sequence

>Msa0591790

ATGGAACAAAAAAACCAAATGAATATTATTCCTTCAATATTTCTTTGTGTGTTGATCACCTTGAGCATTGGTGTTCAACAAATTGAAGCAAGAGCATTTTTTGTGTTTGGTGATTCTCTTGTGGATAATGGAAATAATAACTTCCTAGCTACTACTGCTCGTGCTGATTCATATCCTTATGGAATTGATTCTCAAACTCATAGAGCTTCTGGTCGTTTCTCCAATGGCCTCAACATGCCTGACCTTATTAGTGAAAAAATTGGGTCAGAGCCTACATTACCATATTTGAGTCCAGAGCTTGATGGTGAAAGGTTGCTTAATGGTGCTAATTTTGCTTCTGCTGGGATTGGAATTCTCAATGACACTGGAGTTCAGTTTATTAATATAATCCGAATTACTGCCCAATTAGCATACTTTAAACAGTACCAGCAGAGGGTTAGCGCACTAATTGGAGAAAGTGAGGCACAAAAATTAGTGAATCAAGCATTAACCCTAATAACTTTAGGTGGGAATGATTTTGTGAACAACTATTATTTGGTTCCCTACTCAGCCAGATCTCGTGAATATGCTCTTCCTGATTATGTTGTCTTCCTCATTTCTGAGTATCGCAAAATTCTTATGAATCTATATGAATTGGGAGCAAGAAGAGTTTTGGTGACAGGAACGGGACCACTAGGTTGTGTGCCAGCAGAATTGGCTATGCAAGGAAGAAATGGAGAGTGTGGTGTTCCTCTTCAAACAGCTACTAACTTGTTCAACCCTCAACTTGTTCAATTGATTAATCAACTCAATGCTGAAATTGGTGGTCCTAATCATGTCTTCATCTATGCAAATGCCTTTGCTATGCATTTGGATTTCGTTTCTAATCCACAAGCATACGGATTTGAAACATCAAAACATGCATGTTGTGGTCAAGGACCATACAATGGAGTTGGACTATGTACTCCAGCTTCTAACTTGTGCCCTAATAGGGATCTTTATGCATTTTGGGACCCCTTTCATCCATCAGAAAGAGCCAATAGACTAATCGTTGATAAATTTATGACTGGAACTACCGATTACATGCACCCATATAATCTTAGTACACTTATTGCTATGGATTCTAGGACCTAA

Protein sequence

>Msa0591790

MEQKNQMNIIPSIFLCVLITLSIGVQQIEARAFFVFGDSLVDNGNNNFLATTARADSYPYGIDSQTHRASGRFSNGLNMPDLISEKIGSEPTLPYLSPELDGERLLNGANFASAGIGILNDTGVQFINIIRITAQLAYFKQYQQRVSALIGESEAQKLVNQALTLITLGGNDFVNNYYLVPYSARSREYALPDYVVFLISEYRKILMNLYELGARRVLVTGTGPLGCVPAELAMQGRNGECGVPLQTATNLFNPQLVQLINQLNAEIGGPNHVFIYANAFAMHLDFVSNPQAYGFETSKHACCGQGPYNGVGLCTPASNLCPNRDLYAFWDPFHPSERANRLIVDKFMTGTTDYMHPYNLSTLIAMDSRT*