AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1039680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1039680 MtrunA17_Chr7g0272151 89.112 349 7 5 294 612 5 352 0.0 600
Msa1039680 MtrunA17_Chr7g0272151 98.198 111 2 0 612 722 483 593 1.05e-74 252
Msa1039680 MtrunA17_Chr7g0272151 27.198 364 203 15 28 354 65 403 1.16e-24 109
Msa1039680 MtrunA17_Chr7g0272141 89.264 326 7 3 1 298 1 326 0.0 581
Msa1039680 MtrunA17_Chr7g0272141 30.116 259 169 5 361 612 69 322 3.84e-27 116
Msa1039680 MtrunA17_Chr7g0272141 40.000 100 56 2 613 711 445 541 1.14e-19 93.2
Msa1039680 MtrunA17_Chr1g0192321 55.429 350 123 7 295 612 5 353 1.03e-116 363
Msa1039680 MtrunA17_Chr1g0192321 56.296 135 52 2 588 715 452 586 1.96e-46 174
Msa1039680 MtrunA17_Chr1g0192321 26.488 336 198 11 28 335 62 376 1.65e-25 111
Msa1039680 MtrunA17_Chr1g0192301 51.714 350 129 10 294 612 4 344 1.20e-99 318
Msa1039680 MtrunA17_Chr1g0192301 54.054 111 47 1 612 722 475 581 1.12e-35 142
Msa1039680 MtrunA17_Chr1g0192301 32.197 264 146 9 84 335 125 367 1.26e-25 112
Msa1039680 MtrunA17_Chr1g0192311 51.734 346 128 11 295 612 5 339 4.18e-96 309
Msa1039680 MtrunA17_Chr1g0192311 58.586 99 41 0 612 710 470 568 1.08e-36 145
Msa1039680 MtrunA17_Chr1g0192311 27.019 322 198 9 28 335 64 362 7.75e-26 112
Msa1039680 MtrunA17_Chr1g0192281 51.734 346 128 11 295 612 5 339 4.18e-96 309
Msa1039680 MtrunA17_Chr1g0192281 58.586 99 41 0 612 710 470 568 1.08e-36 145
Msa1039680 MtrunA17_Chr1g0192281 27.019 322 198 9 28 335 64 362 7.75e-26 112
Msa1039680 MtrunA17_Chr4g0000121 50.898 334 124 10 310 612 2 326 6.72e-91 295
Msa1039680 MtrunA17_Chr4g0000121 57.576 99 42 0 612 710 457 555 2.68e-36 144
Msa1039680 MtrunA17_Chr4g0000121 31.955 266 148 9 82 335 105 349 5.00e-26 113
Msa1039680 MtrunA17_Chr2g0295551 39.634 328 169 8 300 610 14 329 6.84e-61 214
Msa1039680 MtrunA17_Chr2g0295551 25.758 330 217 9 2 306 17 343 5.97e-27 116
Msa1039680 MtrunA17_Chr2g0295551 47.273 110 49 2 608 711 457 563 5.97e-25 110
Msa1039680 MtrunA17_Chr4g0067611 42.560 336 159 10 300 612 15 339 1.26e-60 214
Msa1039680 MtrunA17_Chr4g0067611 44.248 113 54 2 611 717 468 577 2.33e-25 111
Msa1039680 MtrunA17_Chr4g0067611 29.046 241 149 6 70 293 103 338 1.18e-24 108
Msa1039680 MtrunA17_Chr4g0067601 41.641 329 168 9 300 610 15 337 9.73e-57 203
Msa1039680 MtrunA17_Chr4g0067601 31.557 244 141 7 70 294 103 339 4.89e-26 113
Msa1039680 MtrunA17_Chr4g0067601 45.133 113 53 2 611 717 468 577 1.44e-25 112
Msa1039680 MtrunA17_Chr2g0295531 38.080 323 175 7 294 610 8 311 1.67e-56 203
Msa1039680 MtrunA17_Chr2g0295531 30.126 239 149 5 70 299 89 318 6.41e-28 119
Msa1039680 MtrunA17_Chr2g0295531 49.074 108 46 2 611 712 442 546 4.56e-27 117
Msa1039680 MtrunA17_Chr2g0295541 37.805 328 175 9 300 610 14 329 5.17e-55 199
Msa1039680 MtrunA17_Chr2g0295541 27.778 288 189 6 70 341 100 384 5.71e-28 119
Msa1039680 MtrunA17_Chr2g0295541 45.455 110 51 2 608 711 488 594 1.85e-23 105
Msa1039680 MtrunA17_Chr8g0354901 35.530 349 186 9 297 616 23 361 3.51e-44 167
Msa1039680 MtrunA17_Chr8g0354901 33.445 299 150 8 79 355 138 409 8.52e-35 140
Msa1039680 MtrunA17_Chr8g0354901 47.191 89 44 1 613 701 485 570 3.10e-22 101
Msa1039680 MtrunA17_Chr3g0080391 34.752 282 167 7 344 616 81 354 1.16e-41 160
Msa1039680 MtrunA17_Chr3g0080391 34.583 240 117 5 82 299 134 355 3.01e-32 132
Msa1039680 MtrunA17_Chr3g0080391 43.750 96 51 1 613 708 478 570 1.30e-21 99.8
Msa1039680 MtrunA17_Chr2g0302021 39.013 223 122 6 82 298 86 300 2.54e-40 155
Msa1039680 MtrunA17_Chr2g0302021 34.468 235 124 8 392 616 86 300 1.82e-25 111
Msa1039680 MtrunA17_Chr2g0302021 41.346 104 57 2 609 711 424 524 8.80e-20 93.6
Msa1039680 MtrunA17_Chr4g0069861 35.227 264 145 6 76 335 70 311 3.01e-40 155
Msa1039680 MtrunA17_Chr4g0069861 38.525 122 67 3 593 713 404 518 7.62e-20 93.6
Msa1039680 MtrunA17_Chr4g0069861 24.735 283 173 10 354 616 30 292 2.97e-17 85.5
Msa1039680 MtrunA17_Chr4g0069841 37.288 236 129 4 70 298 68 291 9.85e-40 154
Msa1039680 MtrunA17_Chr4g0069841 40.833 120 63 3 593 711 403 515 1.42e-20 95.9
Msa1039680 MtrunA17_Chr4g0069841 24.296 284 175 9 352 616 29 291 7.65e-20 93.6
Msa1039680 MtrunA17_Chr1g0194081 33.910 289 161 11 347 615 61 339 2.39e-38 150
Msa1039680 MtrunA17_Chr1g0194081 34.454 238 122 7 82 293 106 335 3.97e-32 132
Msa1039680 MtrunA17_Chr1g0194081 44.660 103 53 2 612 714 467 565 2.02e-23 105
Msa1039680 MtrunA17_Chr7g0269541 30.462 325 186 10 1 294 12 327 2.24e-36 144
Msa1039680 MtrunA17_Chr7g0269541 41.525 118 61 3 592 708 442 552 9.72e-23 102
Msa1039680 MtrunA17_Chr7g0269541 28.431 306 164 12 341 612 43 327 7.93e-20 94.0
Msa1039680 MtrunA17_Chr4g0069891 32.867 286 171 9 344 615 91 369 3.43e-35 141
Msa1039680 MtrunA17_Chr4g0069891 33.054 239 139 8 73 293 130 365 6.78e-30 125
Msa1039680 MtrunA17_Chr4g0069891 39.474 114 65 2 601 714 486 595 5.19e-18 88.2
Msa1039680 MtrunA17_Chr7g0233771 38.889 216 114 7 84 292 117 321 5.01e-35 140
Msa1039680 MtrunA17_Chr7g0233771 32.520 246 144 9 372 612 95 323 4.11e-26 113
Msa1039680 MtrunA17_Chr7g0233771 35.780 109 64 3 604 711 450 553 8.01e-13 71.6
Msa1039680 MtrunA17_Chr7g0233831 35.586 222 113 7 84 292 118 322 7.90e-35 140
Msa1039680 MtrunA17_Chr7g0233831 31.950 241 144 8 376 612 100 324 5.16e-24 107
Msa1039680 MtrunA17_Chr7g0233831 35.455 110 65 3 603 711 450 554 1.03e-14 77.8
Msa1039680 MtrunA17_Chr8g0345281 36.934 287 141 12 358 616 95 369 2.25e-33 135
Msa1039680 MtrunA17_Chr8g0345281 33.761 234 131 4 80 292 128 358 4.80e-33 135
Msa1039680 MtrunA17_Chr8g0345281 41.129 124 65 3 589 711 472 588 5.71e-21 97.8
Msa1039680 MtrunA17_Chr3g0126771 35.802 243 128 8 77 296 133 370 2.25e-33 136
Msa1039680 MtrunA17_Chr3g0126771 31.579 266 163 7 362 612 107 368 1.71e-27 118
Msa1039680 MtrunA17_Chr3g0126771 40.496 121 64 3 592 711 483 596 2.72e-20 95.5
Msa1039680 MtrunA17_Chr1g0147051 34.182 275 142 9 54 296 113 380 5.99e-33 134
Msa1039680 MtrunA17_Chr1g0147051 29.459 370 221 12 297 632 33 396 4.67e-31 129
Msa1039680 MtrunA17_Chr1g0147051 41.000 100 55 2 613 711 510 606 5.14e-18 88.2
Msa1039680 MtrunA17_Chr1g0194091 35.169 236 133 7 396 615 106 337 8.78e-33 134
Msa1039680 MtrunA17_Chr1g0194091 32.340 235 129 8 86 295 106 335 4.74e-28 119
Msa1039680 MtrunA17_Chr1g0194091 43.636 110 52 3 612 714 465 571 2.55e-23 104
Msa1039680 MtrunA17_Chr4g0011791 38.991 218 97 10 84 292 91 281 1.74e-32 132
Msa1039680 MtrunA17_Chr4g0011791 43.564 101 53 2 612 711 411 508 2.30e-19 92.0
Msa1039680 MtrunA17_Chr4g0011791 29.210 291 166 12 332 612 23 283 4.20e-18 88.2
Msa1039680 MtrunA17_Chr7g0270661 30.347 346 208 11 299 615 2 343 1.99e-32 132
Msa1039680 MtrunA17_Chr7g0270661 31.227 269 146 10 69 306 88 348 2.26e-25 111
Msa1039680 MtrunA17_Chr7g0270661 44.156 77 40 1 612 688 471 544 1.15e-16 84.0
Msa1039680 MtrunA17_Chr7g0270671 30.347 346 208 11 299 615 2 343 1.99e-32 132
Msa1039680 MtrunA17_Chr7g0270671 31.227 269 146 10 69 306 88 348 2.26e-25 111
Msa1039680 MtrunA17_Chr7g0270671 44.156 77 40 1 612 688 471 544 1.15e-16 84.0
Msa1039680 MtrunA17_Chr7g0270651 31.525 295 176 10 344 615 52 343 4.37e-32 132
Msa1039680 MtrunA17_Chr7g0270651 29.070 258 150 6 69 296 88 342 4.94e-25 110
Msa1039680 MtrunA17_Chr7g0270651 45.455 77 39 1 612 688 471 544 1.16e-16 84.0
Msa1039680 MtrunA17_Chr8g0391311 34.483 261 139 7 55 294 63 312 7.19e-32 130
Msa1039680 MtrunA17_Chr8g0391311 32.218 239 132 8 391 615 93 315 1.87e-21 99.0
Msa1039680 MtrunA17_Chr8g0391311 40.000 100 56 2 613 711 444 540 7.65e-16 81.3
Msa1039680 MtrunA17_Chr8g0391291 34.231 260 139 7 55 293 61 309 1.90e-31 129
Msa1039680 MtrunA17_Chr8g0391291 32.218 239 132 9 391 615 91 313 9.51e-22 99.8
Msa1039680 MtrunA17_Chr8g0391291 40.000 100 56 2 613 711 442 538 9.14e-16 80.9
Msa1039680 MtrunA17_Chr4g0069881 38.095 210 118 7 88 294 105 305 4.01e-31 128
Msa1039680 MtrunA17_Chr4g0069881 28.968 252 150 7 376 616 81 314 2.39e-21 98.6
Msa1039680 MtrunA17_Chr4g0069881 42.000 100 57 1 612 711 436 534 2.19e-19 92.4
Msa1039680 MtrunA17_Chr8g0391281 35.223 247 128 7 69 294 75 310 4.13e-31 124
Msa1039680 MtrunA17_Chr8g0391281 30.651 261 150 10 367 612 66 310 7.19e-21 94.4
Msa1039680 MtrunA17_Chr7g0233801 36.239 218 121 8 84 294 117 323 7.96e-31 127
Msa1039680 MtrunA17_Chr7g0233801 32.794 247 134 9 376 612 99 323 2.43e-27 117
Msa1039680 MtrunA17_Chr7g0233801 36.697 109 64 2 603 711 449 552 5.11e-16 82.0
Msa1039680 MtrunA17_Chr4g0011771 37.615 218 105 8 82 292 90 283 3.40e-30 125
Msa1039680 MtrunA17_Chr4g0011771 43.878 98 51 2 613 709 416 510 5.06e-19 91.3
Msa1039680 MtrunA17_Chr4g0011771 29.730 259 149 9 358 612 56 285 8.17e-19 90.5
Msa1039680 MtrunA17_Chr7g0270631 29.305 331 201 12 314 615 5 331 8.45e-30 126
Msa1039680 MtrunA17_Chr7g0270631 29.730 333 201 12 312 615 551 879 5.85e-27 117
Msa1039680 MtrunA17_Chr7g0270631 30.268 261 145 7 68 296 75 330 2.43e-25 112
Msa1039680 MtrunA17_Chr7g0270631 31.538 260 141 8 69 296 624 878 3.37e-25 112
Msa1039680 MtrunA17_Chr7g0270631 45.455 77 39 1 612 688 459 532 2.25e-16 84.0
Msa1039680 MtrunA17_Chr7g0270631 40.000 80 45 1 612 688 1009 1088 1.66e-13 74.3
Msa1039680 MtrunA17_Chr7g0234731 34.419 215 113 7 91 295 121 317 1.88e-28 116
Msa1039680 MtrunA17_Chr8g0345211 31.086 267 161 9 357 612 101 355 1.24e-27 118
Msa1039680 MtrunA17_Chr8g0345211 33.808 281 150 10 44 294 81 355 1.16e-24 108
Msa1039680 MtrunA17_Chr8g0345211 41.237 97 54 2 613 708 484 578 2.55e-16 82.8
Msa1039680 MtrunA17_Chr3g0079341 32.927 246 118 8 127 355 134 349 8.95e-27 115
Msa1039680 MtrunA17_Chr3g0079341 39.216 102 55 3 613 711 429 526 2.21e-16 82.8
Msa1039680 MtrunA17_Chr1g0192331 33.193 238 136 6 71 294 69 297 9.34e-27 115
Msa1039680 MtrunA17_Chr1g0192331 43.434 99 53 1 613 711 432 527 4.69e-20 94.4
Msa1039680 MtrunA17_Chr1g0192331 30.222 225 130 8 398 612 90 297 2.36e-13 73.2
Msa1039680 MtrunA17_Chr3g0079351 32.400 250 118 9 125 355 132 349 2.07e-26 114
Msa1039680 MtrunA17_Chr3g0079351 41.176 102 53 3 613 711 429 526 3.58e-17 85.5
Msa1039680 MtrunA17_Chr3g0079361 32.520 246 119 8 127 355 134 349 8.01e-26 112
Msa1039680 MtrunA17_Chr3g0079361 39.216 102 55 3 613 711 429 526 2.77e-16 82.4
Msa1039680 MtrunA17_Chr7g0270691 31.429 245 144 8 68 293 81 320 8.19e-26 112
Msa1039680 MtrunA17_Chr7g0270691 25.305 328 216 10 309 615 5 324 6.06e-22 100
Msa1039680 MtrunA17_Chr7g0270691 39.604 101 56 3 612 711 452 548 1.86e-18 89.7
Msa1039680 MtrunA17_Chr3g0090091 33.333 249 115 10 127 355 133 350 8.75e-26 112
Msa1039680 MtrunA17_Chr3g0090091 39.216 102 55 3 613 711 430 527 7.83e-16 81.3
Msa1039680 MtrunA17_Chr4g0018371 33.036 224 128 6 81 294 98 309 1.68e-24 108
Msa1039680 MtrunA17_Chr4g0018371 33.333 126 69 4 591 711 423 538 3.06e-15 79.3
Msa1039680 MtrunA17_Chr4g0018371 31.720 186 105 9 434 612 139 309 1.68e-12 70.5
Msa1039680 MtrunA17_Chr4g0011751 34.821 224 119 10 78 293 55 259 2.01e-23 104
Msa1039680 MtrunA17_Chr4g0011751 36.792 106 63 2 607 711 386 488 2.85e-16 82.4
Msa1039680 MtrunA17_Chr4g0011751 28.571 210 107 6 418 610 75 258 6.89e-11 65.5
Msa1039680 MtrunA17_Chr1g0195311 45.872 109 52 2 603 711 212 313 2.83e-23 101
Msa1039680 MtrunA17_Chr8g0354911 43.689 103 55 1 609 711 512 611 5.56e-23 103
Msa1039680 MtrunA17_Chr8g0354911 30.040 253 140 9 80 296 135 386 1.18e-20 96.7
Msa1039680 MtrunA17_Chr8g0354911 28.859 298 156 11 359 612 99 384 2.26e-18 89.4
Msa1039680 MtrunA17_Chr1g0195301 45.872 109 52 2 603 711 453 554 7.68e-23 103
Msa1039680 MtrunA17_Chr1g0195301 27.957 279 151 8 88 335 91 350 4.21e-19 91.7
Msa1039680 MtrunA17_Chr1g0195301 24.925 333 210 11 312 616 11 331 9.26e-15 77.8
Msa1039680 MtrunA17_Chr1g0195321 45.872 109 52 2 603 711 453 554 7.68e-23 103
Msa1039680 MtrunA17_Chr1g0195321 27.957 279 151 8 88 335 91 350 4.21e-19 91.7
Msa1039680 MtrunA17_Chr1g0195321 24.925 333 210 11 312 616 11 331 9.26e-15 77.8
Msa1039680 MtrunA17_Chr1g0175661 30.932 236 133 6 88 294 96 330 1.49e-22 102
Msa1039680 MtrunA17_Chr1g0175661 44.037 109 54 2 603 711 456 557 2.92e-21 98.6
Msa1039680 MtrunA17_Chr1g0175661 28.378 296 179 8 347 616 46 334 2.44e-18 89.4
Msa1039680 MtrunA17_Chr1g0195331 45.872 109 52 2 603 711 453 554 1.92e-22 102
Msa1039680 MtrunA17_Chr1g0195331 28.315 279 150 8 88 335 91 350 1.05e-19 93.6
Msa1039680 MtrunA17_Chr1g0195331 25.225 333 209 11 312 616 11 331 3.67e-15 79.0
Msa1039680 MtrunA17_Chr3g0080381 40.777 103 58 1 609 711 528 627 5.28e-22 100
Msa1039680 MtrunA17_Chr3g0080381 27.027 259 148 6 77 296 146 402 3.08e-16 82.8
Msa1039680 MtrunA17_Chr7g0269511 31.646 237 131 7 88 294 101 336 3.37e-21 98.2
Msa1039680 MtrunA17_Chr7g0269511 40.367 109 62 1 601 709 456 561 4.24e-20 94.7
Msa1039680 MtrunA17_Chr7g0269511 28.000 275 170 10 375 625 79 349 2.01e-16 83.2
Msa1039680 MtrunA17_Chr2g0299431 42.857 105 57 2 193 294 30 134 1.98e-20 92.4
Msa1039680 MtrunA17_Chr2g0302001 41.000 100 56 1 612 711 340 436 3.03e-20 94.4
Msa1039680 MtrunA17_Chr8g0380581 43.434 99 51 3 613 710 280 374 4.51e-20 92.8
Msa1039680 MtrunA17_Chr8g0380581 42.308 104 55 4 194 293 45 147 3.22e-16 81.3
Msa1039680 MtrunA17_Chr8g0380581 38.971 136 65 7 492 621 31 154 1.27e-12 70.1
Msa1039680 MtrunA17_Chr7g0269521 42.202 109 56 2 603 711 460 561 5.93e-20 94.4
Msa1039680 MtrunA17_Chr7g0269521 26.769 325 188 12 326 616 30 338 2.64e-16 82.8
Msa1039680 MtrunA17_Chr7g0269521 29.064 203 106 7 126 294 136 334 2.62e-15 79.7
Msa1039680 MtrunA17_Chr3g0129921 35.897 117 68 3 593 709 450 559 6.50e-20 94.4
Msa1039680 MtrunA17_Chr3g0129921 23.881 335 189 9 1 294 21 330 2.45e-13 73.2
Msa1039680 MtrunA17_Chr1g0195351 44.860 107 50 3 603 709 453 550 7.30e-20 94.0
Msa1039680 MtrunA17_Chr1g0195351 27.957 279 151 8 88 335 91 350 4.56e-19 91.7
Msa1039680 MtrunA17_Chr1g0195351 24.925 333 210 11 312 616 11 331 1.73e-14 77.0
Msa1039680 MtrunA17_Chr5g0437831 37.838 111 62 2 195 299 50 159 9.09e-19 89.0
Msa1039680 MtrunA17_Chr5g0437831 35.514 107 64 3 606 711 280 382 5.42e-16 80.5
Msa1039680 MtrunA17_Chr5g0437831 33.871 124 73 3 496 615 39 157 6.46e-14 74.3
Msa1039680 MtrunA17_Chr7g0269531 39.623 106 57 2 603 708 463 561 9.90e-18 87.4
Msa1039680 MtrunA17_Chr7g0269531 27.985 268 131 9 130 355 142 389 1.02e-16 84.0
Msa1039680 MtrunA17_Chr7g0269531 28.682 258 136 10 395 615 94 340 4.21e-12 69.3
Msa1039680 MtrunA17_Chr8g0384121 39.362 94 52 2 613 706 470 558 3.54e-17 85.5
Msa1039680 MtrunA17_Chr8g0384121 41.000 100 52 4 212 304 244 343 1.59e-12 70.9
Msa1039680 MtrunA17_Chr8g0391261 40.000 100 56 2 613 711 69 165 1.55e-16 77.8
Msa1039680 MtrunA17_Chr7g0234711 40.196 102 54 3 613 711 171 268 2.27e-16 80.1
Msa1039680 MtrunA17_Chr2g0301931 40.000 115 65 2 597 711 181 291 2.80e-16 80.1
Msa1039680 MtrunA17_Chr7g0271381 27.976 336 191 14 295 610 16 320 9.51e-16 80.9
Msa1039680 MtrunA17_Chr7g0271381 31.401 207 128 5 91 293 125 321 1.30e-14 77.4
Msa1039680 MtrunA17_Chr7g0271381 33.663 101 61 2 614 711 458 555 3.28e-13 72.8
Msa1039680 MtrunA17_Chr4g0018241 38.235 102 48 3 81 171 96 193 7.20e-13 68.2
Msa1039680 MtrunA17_Chr4g0018251 38.614 101 47 3 81 170 96 192 8.47e-13 67.8
Msa1039680 MtrunA17_Chr5g0446301 35.165 91 54 2 613 703 274 359 1.66e-12 69.7
Msa1039680 MtrunA17_Chr2g0301941 26.636 214 125 6 300 485 22 231 3.96e-12 68.6
Msa1039680 MtrunA17_Chr2g0334111 34.906 106 64 3 607 711 221 322 1.67e-11 66.2
Msa1039680 MtrunA17_Chr4g0018281 36.441 118 56 4 68 170 79 192 2.04e-11 63.9
Msa1039680 MtrunA17_Chr8g0389771 34.831 89 53 2 613 701 294 377 2.69e-11 66.2
Msa1039680 MtrunA17_Chr6g0487101 35.955 89 52 2 613 701 297 380 3.34e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1039680 AT3G05620.1 41.902 389 163 10 9 355 7 374 1.12e-83 275
Msa1039680 AT3G05620.1 25.915 355 191 10 305 616 1 326 1.62e-23 105
Msa1039680 AT3G05620.1 40.404 99 56 1 613 711 445 540 1.51e-17 87.0
Msa1039680 AT3G05610.1 42.274 343 166 8 295 615 8 340 6.12e-80 269
Msa1039680 AT3G05610.1 32.453 265 132 10 82 327 116 352 3.50e-31 130
Msa1039680 AT3G05610.1 42.857 119 58 2 607 718 463 578 7.21e-25 110
Msa1039680 AT5G27870.1 40.237 338 176 7 295 615 9 337 1.70e-75 258
Msa1039680 AT5G27870.1 31.716 268 150 8 84 328 117 374 7.49e-32 132
Msa1039680 AT5G27870.1 38.793 116 64 2 593 708 450 558 2.90e-22 102
Msa1039680 AT5G49180.1 39.826 344 169 12 298 612 8 342 2.89e-59 210
Msa1039680 AT5G49180.1 46.667 120 57 2 589 708 454 566 7.41e-27 116
Msa1039680 AT5G49180.1 29.368 269 167 9 88 334 121 388 2.94e-20 95.9
Msa1039680 AT4G33220.1 40.891 247 124 5 73 298 53 298 9.31e-51 186
Msa1039680 AT4G33220.1 30.798 263 157 7 371 616 44 298 2.45e-23 105
Msa1039680 AT4G33220.1 37.383 107 63 2 606 711 419 522 3.70e-16 82.8
Msa1039680 AT3G06830.1 33.430 344 194 10 295 611 4 339 1.10e-45 172
Msa1039680 AT3G06830.1 46.610 118 56 2 592 709 455 565 9.75e-26 112
Msa1039680 AT3G06830.1 27.888 251 145 9 82 304 111 353 3.73e-19 92.4
Msa1039680 AT3G43270.1 38.589 241 136 5 69 298 61 300 1.87e-44 168
Msa1039680 AT3G43270.1 32.759 232 142 5 393 616 75 300 6.58e-24 106
Msa1039680 AT3G43270.1 39.806 103 58 2 610 711 425 524 2.44e-17 86.3
Msa1039680 AT1G11580.1 37.900 219 116 5 84 292 118 326 6.52e-37 146
Msa1039680 AT1G11580.1 30.702 228 132 6 394 612 118 328 3.69e-21 98.6
Msa1039680 AT1G11580.1 36.364 121 69 3 589 708 440 553 7.45e-18 88.2
Msa1039680 AT1G11580.2 37.900 219 116 5 84 292 139 347 8.38e-37 146
Msa1039680 AT1G11580.2 30.702 228 132 6 394 612 139 349 3.20e-21 99.0
Msa1039680 AT1G11580.2 36.364 121 69 3 589 708 461 574 7.21e-18 88.2
Msa1039680 AT3G10710.1 33.824 340 186 14 297 616 21 341 6.04e-36 144
Msa1039680 AT3G10710.1 35.341 249 136 9 60 294 100 337 2.25e-28 120
Msa1039680 AT3G10710.1 38.462 104 61 1 608 711 460 560 1.28e-20 96.7
Msa1039680 AT5G53370.1 33.538 325 189 10 304 612 43 356 6.93e-36 144
Msa1039680 AT5G53370.1 31.802 283 159 9 37 293 81 355 2.04e-33 136
Msa1039680 AT5G53370.1 40.777 103 57 2 613 714 488 587 1.51e-17 87.4
Msa1039680 AT5G53370.2 33.639 327 186 11 304 612 79 392 1.14e-35 143
Msa1039680 AT5G53370.2 31.802 283 159 9 37 293 117 391 3.05e-33 136
Msa1039680 AT5G53370.2 40.777 103 57 2 613 714 524 623 1.69e-17 87.0
Msa1039680 AT4G33220.2 41.765 170 84 3 143 298 9 177 9.02e-35 137
Msa1039680 AT4G33220.2 43.077 130 65 4 491 616 53 177 3.55e-18 87.8
Msa1039680 AT4G33220.2 38.835 103 59 2 610 711 302 401 4.83e-16 81.3
Msa1039680 AT5G04960.1 34.884 344 180 12 297 616 20 343 5.80e-34 137
Msa1039680 AT5G04960.1 44.898 98 50 2 613 709 467 561 1.57e-22 102
Msa1039680 AT5G04960.1 32.314 229 127 6 81 294 124 339 4.24e-22 101
Msa1039680 AT4G02300.1 31.447 318 159 11 4 294 18 303 3.12e-32 132
Msa1039680 AT4G02300.1 30.712 267 163 8 358 612 47 303 7.49e-22 100
Msa1039680 AT4G02300.1 37.624 101 59 2 612 711 434 531 2.42e-16 83.2
Msa1039680 AT3G14300.1 35.165 273 142 9 359 612 486 742 4.96e-32 134
Msa1039680 AT3G14300.1 29.487 234 148 5 88 307 525 755 2.43e-23 106
Msa1039680 AT3G14300.1 45.833 96 48 4 608 701 865 958 5.70e-17 85.9
Msa1039680 AT3G14300.1 26.016 246 145 7 297 511 25 264 1.42e-15 81.6
Msa1039680 AT1G53840.1 31.003 329 190 11 355 664 95 405 7.50e-32 131
Msa1039680 AT1G53840.1 34.314 204 109 6 125 307 176 375 1.06e-22 103
Msa1039680 AT1G53840.1 47.368 95 47 2 613 706 489 581 7.21e-21 97.8
Msa1039680 AT3G49220.2 31.837 245 139 6 69 295 179 413 2.03e-31 128
Msa1039680 AT3G49220.2 27.300 337 216 10 295 610 82 410 1.45e-29 122
Msa1039680 AT2G45220.1 38.785 214 107 8 82 292 90 282 2.47e-31 129
Msa1039680 AT2G45220.1 31.429 315 163 15 310 612 11 284 1.88e-20 95.9
Msa1039680 AT2G45220.1 36.066 122 69 4 591 711 397 510 1.03e-15 81.3
Msa1039680 AT4G02320.1 31.119 286 143 8 33 294 34 289 1.63e-30 127
Msa1039680 AT4G02320.1 38.333 120 66 3 591 709 403 515 1.07e-19 93.6
Msa1039680 AT4G02320.1 28.302 265 161 8 363 612 39 289 4.82e-17 85.5
Msa1039680 AT2G26450.1 34.109 258 147 9 361 610 139 381 2.25e-30 127
Msa1039680 AT2G26450.1 35.135 222 127 6 82 293 168 382 7.32e-27 116
Msa1039680 AT2G26450.1 44.554 101 51 3 612 711 514 610 2.85e-18 89.7
Msa1039680 AT2G26440.1 38.739 222 113 8 88 293 104 318 6.21e-30 125
Msa1039680 AT2G26440.1 42.000 100 55 1 612 711 450 546 4.97e-20 94.7
Msa1039680 AT2G26440.1 29.278 263 152 6 376 616 78 328 5.24e-19 91.7
Msa1039680 AT3G49220.3 27.434 339 217 10 295 612 82 412 1.40e-29 125
Msa1039680 AT3G49220.3 31.557 244 139 6 69 294 179 412 4.43e-29 123
Msa1039680 AT3G49220.3 41.346 104 57 2 609 711 540 640 4.16e-18 89.4
Msa1039680 AT3G49220.1 27.434 339 217 10 295 612 37 367 1.48e-29 124
Msa1039680 AT3G49220.1 31.557 244 139 6 69 294 134 367 3.99e-29 123
Msa1039680 AT3G49220.1 41.346 104 57 2 609 711 495 595 3.65e-18 89.4
Msa1039680 AT1G53830.1 33.190 232 132 4 84 292 125 356 1.59e-29 124
Msa1039680 AT1G53830.1 35.197 304 152 14 347 616 75 367 4.07e-29 123
Msa1039680 AT1G53830.1 42.017 119 61 3 592 709 473 584 9.58e-20 94.4
Msa1039680 AT4G33230.1 31.154 260 165 6 359 610 123 376 2.92e-28 120
Msa1039680 AT4G33230.1 29.392 296 172 7 31 293 86 377 4.82e-28 120
Msa1039680 AT4G33230.1 40.594 101 55 3 612 711 509 605 1.86e-14 77.4
Msa1039680 AT3G14310.1 30.453 243 132 4 84 292 122 361 1.16e-27 119
Msa1039680 AT3G14310.1 33.119 311 157 14 347 616 72 372 3.37e-27 117
Msa1039680 AT3G14310.1 36.290 124 71 3 589 711 475 591 1.48e-17 87.4
Msa1039680 AT1G23200.1 34.661 251 121 8 80 296 95 336 1.69e-27 118
Msa1039680 AT1G23200.1 40.517 116 61 3 599 711 443 553 6.76e-19 91.3
Msa1039680 AT1G23200.1 30.182 275 138 12 371 612 81 334 1.04e-15 81.3
Msa1039680 AT5G51490.1 31.915 235 143 5 68 294 80 305 3.33e-27 117
Msa1039680 AT5G51490.1 39.091 110 61 3 603 711 431 535 4.67e-19 91.7
Msa1039680 AT5G51500.1 32.489 237 139 7 68 294 84 309 9.16e-27 115
Msa1039680 AT5G51500.1 37.755 98 59 2 613 709 441 537 5.35e-17 85.5
Msa1039680 AT5G51500.1 25.271 277 178 11 347 612 51 309 8.85e-11 65.5
Msa1039680 AT3G47400.1 34.335 233 130 6 75 294 141 363 3.76e-26 114
Msa1039680 AT3G47400.1 36.641 131 78 3 585 711 464 593 1.21e-16 84.3
Msa1039680 AT3G47400.1 25.000 260 170 8 362 613 122 364 5.78e-12 69.3
Msa1039680 AT2G43050.1 35.321 218 106 7 89 292 98 294 1.17e-25 112
Msa1039680 AT2G43050.1 40.777 103 57 2 610 711 416 515 1.60e-19 93.2
Msa1039680 AT3G59010.1 32.719 217 122 6 89 292 102 307 1.83e-24 108
Msa1039680 AT3G59010.1 37.500 104 61 2 609 711 427 527 1.09e-15 81.3
Msa1039680 AT3G59010.1 26.923 234 148 8 393 615 91 312 4.27e-13 72.8
Msa1039680 AT4G15980.2 31.163 215 127 6 296 493 9 219 8.45e-24 107
Msa1039680 AT4G15980.2 50.833 120 52 4 499 612 366 484 2.31e-21 99.8
Msa1039680 AT4G15980.2 42.017 119 62 2 591 709 598 709 8.92e-19 91.7
Msa1039680 AT4G15980.2 33.544 158 92 4 182 326 365 522 2.99e-17 86.7
Msa1039680 AT4G15980.1 30.000 210 127 5 301 493 3 209 2.03e-23 106
Msa1039680 AT4G15980.1 50.833 120 52 4 499 612 356 474 2.33e-21 99.8
Msa1039680 AT4G15980.1 42.017 119 62 2 591 709 588 699 7.98e-19 91.7
Msa1039680 AT4G15980.1 33.544 158 92 4 182 326 355 512 2.68e-17 86.7
Msa1039680 AT3G10720.1 39.806 103 59 1 609 711 159 258 6.40e-22 96.7
Msa1039680 AT4G02330.1 29.210 291 143 9 88 335 96 366 9.26e-22 100
Msa1039680 AT4G02330.1 43.434 99 53 1 613 711 475 570 4.07e-19 92.0
Msa1039680 AT4G02330.1 27.778 252 141 11 398 612 96 343 2.06e-12 70.9
Msa1039680 AT3G27980.1 43.396 106 55 3 608 711 394 496 1.79e-21 99.0
Msa1039680 AT3G27980.1 33.529 170 98 5 129 292 108 268 9.16e-18 87.4
Msa1039680 AT4G00190.1 33.649 211 108 6 88 293 64 247 2.04e-21 98.6
Msa1039680 AT4G00190.1 37.755 98 57 2 613 709 377 471 1.44e-16 83.6
Msa1039680 AT4G00190.1 27.306 271 151 9 346 610 16 246 6.25e-13 72.0
Msa1039680 AT4G03930.1 43.396 106 55 3 608 711 421 523 2.54e-21 99.0
Msa1039680 AT4G03930.1 33.166 199 107 7 120 307 123 306 3.53e-21 98.2
Msa1039680 AT4G03930.1 25.846 325 196 12 304 612 2 297 1.14e-11 68.6
Msa1039680 AT3G10720.2 39.806 103 59 1 609 711 515 614 4.78e-21 98.6
Msa1039680 AT3G10720.2 26.837 313 162 12 88 355 149 439 8.63e-16 81.6
Msa1039680 AT3G10720.2 27.966 236 123 9 419 612 157 387 6.84e-11 66.2
Msa1039680 AT1G11590.1 40.952 105 58 2 608 711 422 523 6.24e-21 97.4
Msa1039680 AT1G11590.1 35.326 184 97 6 120 292 123 295 4.76e-20 94.7
Msa1039680 AT5G04970.1 39.252 107 62 1 609 715 520 623 2.15e-20 96.3
Msa1039680 AT5G04970.1 26.959 319 160 13 85 355 151 444 6.15e-17 85.5
Msa1039680 AT1G02810.1 45.455 99 51 1 613 711 481 576 2.17e-20 96.3
Msa1039680 AT1G02810.1 25.753 299 153 6 88 335 92 372 9.20e-17 84.7
Msa1039680 AT1G02810.1 40.909 88 45 2 535 615 265 352 6.16e-11 66.2
Msa1039680 AT2G47550.1 41.441 111 62 1 601 711 450 557 4.27e-20 95.1
Msa1039680 AT2G47550.1 34.568 243 110 11 88 293 99 329 2.40e-19 92.8
Msa1039680 AT2G47550.1 32.157 255 133 11 388 610 82 328 1.10e-16 84.3
Msa1039680 AT3G60730.1 30.638 235 131 6 86 296 66 292 6.81e-20 94.4
Msa1039680 AT3G60730.1 41.129 124 65 3 589 711 402 518 2.29e-19 92.8
Msa1039680 AT5G20860.2 30.556 216 119 7 90 293 110 306 6.39e-18 88.2
Msa1039680 AT5G20860.2 28.740 254 144 14 370 611 78 306 4.22e-14 76.3
Msa1039680 AT5G20860.2 35.000 100 64 1 612 711 439 537 1.24e-13 74.7
Msa1039680 AT1G11370.1 47.126 87 42 1 530 612 41 127 1.72e-17 84.0
Msa1039680 AT1G11370.1 44.000 100 55 1 195 294 29 127 3.01e-17 83.2
Msa1039680 AT3G62170.1 28.904 301 164 11 335 594 49 340 6.19e-17 85.5
Msa1039680 AT3G62170.1 23.529 306 166 10 37 280 45 344 1.08e-15 81.3
Msa1039680 AT3G62170.1 39.000 100 57 2 612 711 492 587 2.87e-14 77.0
Msa1039680 AT2G47030.1 25.654 382 212 16 304 624 6 376 1.28e-16 84.3
Msa1039680 AT2G47030.1 41.748 103 55 3 610 711 489 587 1.73e-15 80.9
Msa1039680 AT2G47030.1 22.006 359 206 10 3 292 5 358 2.62e-15 80.1
Msa1039680 AT5G09760.2 40.217 92 50 2 613 704 490 576 5.76e-15 79.0
Msa1039680 AT5G09760.2 26.710 307 160 12 33 294 64 350 3.97e-14 76.3
Msa1039680 AT5G09760.2 29.210 291 165 13 346 615 83 353 2.60e-12 70.5
Msa1039680 AT5G09760.1 40.217 92 50 2 613 704 464 550 5.91e-15 79.0
Msa1039680 AT5G09760.1 27.974 311 151 14 33 294 38 324 3.99e-14 76.3
Msa1039680 AT5G09760.1 29.210 291 165 13 346 615 57 327 1.97e-12 70.9
Msa1039680 AT2G47040.1 38.000 100 58 2 612 711 499 594 1.21e-14 78.2
Msa1039680 AT2G47040.1 35.714 98 52 1 194 280 254 351 1.62e-13 74.3
Msa1039680 AT5G64640.1 39.130 92 51 2 613 704 515 601 4.46e-14 76.3
Msa1039680 AT5G64640.1 26.230 305 154 14 21 294 110 374 6.55e-13 72.4
Msa1039680 AT1G44980.1 37.383 107 59 2 195 294 54 159 1.18e-13 72.0
Msa1039680 AT2G21610.1 36.667 90 52 2 613 702 249 333 1.54e-13 73.2
Msa1039680 AT2G21610.2 36.667 90 52 2 613 702 254 338 1.62e-13 73.2
Msa1039680 AT2G36710.1 35.484 93 55 2 614 706 303 390 1.04e-11 68.2
Msa1039680 AT3G62820.1 25.543 184 126 6 309 484 10 190 1.43e-11 64.7
Msa1039680 AT5G19730.1 34.409 93 56 2 611 703 296 383 3.16e-11 66.2

Find 148 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCATCTCTTCGAATGTTT+TGG 0.261353 7_1:+76900639 None:intergenic
TTTGGAAAGTTGGTTAATAA+TGG 0.264039 7_1:+76900657 None:intergenic
AGCTTAATCGCTTACCCTTT+AGG 0.279269 7_1:-76903798 Msa1039680:CDS
TCCTCACGAGTTTGAAAGTA+TGG 0.280851 7_1:-76900804 Msa1039680:CDS
ATGTTAAACAGCGTGTAAAA+TGG 0.287244 7_1:-76899289 Msa1039680:CDS
AAGCTTGCATATCTTGAGTT+TGG 0.290313 7_1:+76904283 None:intergenic
AAGCATCCAAACATGTTTCT+TGG 0.291839 7_1:+76900761 None:intergenic
CTTGATCAAATGATGGTAAA+AGG 0.301062 7_1:+76904340 None:intergenic
CGTAGGCTTTAACAACAAAA+AGG 0.307002 7_1:-76901175 Msa1039680:CDS
GGCGAGTCTCTTATTCCTCT+TGG 0.325806 7_1:+76901254 None:intergenic
GCGATCTTGATGAGTTCTTT+TGG 0.333772 7_1:+76901015 None:intergenic
TTAGTCGCTCCTGGAGAATA+AGG 0.334117 7_1:+76899173 None:intergenic
AATAAGAGACTCGCCATAAT+TGG 0.336144 7_1:-76901246 Msa1039680:CDS
TGGACTTGGAGGGCCTGTTC+TGG 0.341206 7_1:+76904191 None:intergenic
TCTCCATGGAAGAACCTAAT+TGG 0.344137 7_1:+76899221 None:intergenic
ACTCAAGAACAAAGCTTACT+TGG 0.364967 7_1:-76899471 Msa1039680:intron
TCAGAGCTTGCATGGTCGTT+AGG 0.365066 7_1:-76904021 Msa1039680:CDS
TGTTTGTGAGGCATGAGTTT+TGG 0.365441 7_1:+76904229 None:intergenic
TCCATGGAGATGATTGGATT+AGG 0.367957 7_1:-76899208 Msa1039680:CDS
GATCTTTGTCATGTTGTTGA+TGG 0.368569 7_1:+76904116 None:intergenic
GGACTCTGTCGAGGCTATTA+AGG 0.370735 7_1:+76900824 None:intergenic
TCAGCCTCTGTCATCCATTC+AGG 0.371531 7_1:+76903721 None:intergenic
GAGCTCCTTGCAATCTTCTA+TGG 0.371794 7_1:+76904059 None:intergenic
TGAACCTTTCTAGTGACCTT+TGG 0.372141 7_1:+76900857 None:intergenic
TGCCATGGCATATAACCTTC+AGG 0.375684 7_1:+76899383 None:intergenic
TACCTTCTTATTAGTTGCTA+TGG 0.379202 7_1:-76901217 Msa1039680:CDS
CCATGGAGATGATTGGATTA+GGG 0.381519 7_1:-76899207 Msa1039680:CDS
AACTAGTACTGATGAAAGTT+TGG 0.382732 7_1:-76903749 Msa1039680:CDS
ATGTCTGAGGGAATTTCATC+TGG 0.384523 7_1:+76904306 None:intergenic
GGTAGAAAGACACGCATTAC+TGG 0.385408 7_1:-76900289 Msa1039680:CDS
GAAGGTAGAGACACCAATTA+TGG 0.391812 7_1:+76901233 None:intergenic
GGTTCTTCCATGGAGATGAT+TGG 0.392530 7_1:-76899214 Msa1039680:CDS
CAGAGCTTGCATGGTCGTTA+GGG 0.395199 7_1:-76904020 Msa1039680:CDS
ACAATTTAATTTCAATGAGT+TGG 0.409721 7_1:+76899134 None:intergenic
TTTCAATGAGTTGGTCTTGA+AGG 0.414935 7_1:+76899143 None:intergenic
GATGCAGTTGTTGCGTTGGA+TGG 0.417977 7_1:-76903658 Msa1039680:CDS
AATGACTGGCAGGAAACTTC+AGG 0.422351 7_1:-76900488 Msa1039680:CDS
CCGCACTTAGCCATGCTTCG+AGG 0.428133 7_1:+76903947 None:intergenic
TTTGAAGTTTGATCTTCTCC+AGG 0.434407 7_1:+76901150 None:intergenic
CAGCTCCTAGTCATAGCAAT+AGG 0.443935 7_1:-76903597 Msa1039680:CDS
CACATACCAAGAAACATGTT+TGG 0.444323 7_1:-76900767 Msa1039680:CDS
GCCATTTGTTATTTACATCA+AGG 0.444761 7_1:-76900380 Msa1039680:CDS
ACAGAACATTACTGATAAGC+TGG 0.453691 7_1:+76903833 None:intergenic
GGCTCATGTTGTTGTTGCTA+AGG 0.457290 7_1:-76900467 Msa1039680:CDS
TAACAGCTTCGTTGATTGTA+CGG 0.460625 7_1:+76903623 None:intergenic
TGACCTTTGGAATTCGTCAA+TGG 0.461831 7_1:+76900870 None:intergenic
CGTCTTGAGAGTTACATTAG+TGG 0.463916 7_1:-76903874 Msa1039680:CDS
TCATGCAAGGTAGTGTTCCT+TGG 0.464611 7_1:+76903772 None:intergenic
ACTAGAGTTCCTTATTCTCC+AGG 0.465518 7_1:-76899182 Msa1039680:CDS
TTGATGACCGTGCTGGTGTT+AGG 0.465795 7_1:-76900525 Msa1039680:CDS
CATAACGAGCTAACCAGAAC+AGG 0.467307 7_1:-76904204 Msa1039680:CDS
GAGTACAATAACCGTGGTCC+TGG 0.487955 7_1:-76899317 Msa1039680:CDS
TCCTTGATGTAAATAACAAA+TGG 0.488674 7_1:+76900379 None:intergenic
GAGAATACTACAACCGATGC+TGG 0.495607 7_1:-76900736 Msa1039680:CDS
ACCCTTCAATACATGTGTCT+TGG 0.497187 7_1:+76903914 None:intergenic
ACATGTTATCTATGTGAAGA+AGG 0.503880 7_1:-76903572 Msa1039680:CDS
AACCAAGACACATGTATTGA+AGG 0.506538 7_1:-76903916 Msa1039680:CDS
TTCTTAATAAAATGACTGGC+AGG 0.507419 7_1:-76900498 Msa1039680:CDS
AAAGTTTGGAGTTTCCTGAA+TGG 0.509972 7_1:-76903735 Msa1039680:CDS
CATGTTGTTGTTGCTAAGGA+TGG 0.512218 7_1:-76900463 Msa1039680:CDS
GTAAAAGGATAAGAATGAAA+AGG 0.512279 7_1:+76904355 None:intergenic
TCAGTTCCTGTGATACCTGC+TGG 0.512310 7_1:+76899356 None:intergenic
AGTGTTCCTTGGAGACCTAA+AGG 0.513393 7_1:+76903783 None:intergenic
AACCATAGCAACTAATAAGA+AGG 0.515074 7_1:+76901215 None:intergenic
AAACTTCTTAATAAAATGAC+TGG 0.516106 7_1:-76900502 Msa1039680:CDS
AATTCCAAAGGTCACTAGAA+AGG 0.517206 7_1:-76900861 Msa1039680:intron
AAGCTTACTTGGCTCGTCCA+TGG 0.517908 7_1:-76899460 Msa1039680:CDS
AGAGTCACGCGTATCTCAAT+CGG 0.519171 7_1:-76901127 Msa1039680:intron
ATGATCGTTGGTGATGGTAT+TGG 0.525137 7_1:-76903502 Msa1039680:CDS
CCCTAATCCAATCATCTCCA+TGG 0.525263 7_1:+76899207 None:intergenic
TTCAAAAGACGACGACCAGC+AGG 0.525389 7_1:+76900613 None:intergenic
GTGTTCCTTGGAGACCTAAA+GGG 0.526257 7_1:+76903784 None:intergenic
TGACAGAAGTTGGACTTGGA+GGG 0.528123 7_1:+76904181 None:intergenic
GTTAAGACTATTACTTCAGA+AGG 0.532193 7_1:-76899260 Msa1039680:CDS
CGCTGTTTAACATCGGAACC+AGG 0.533128 7_1:+76899299 None:intergenic
CAATGAGTTGGTCTTGAAGG+AGG 0.534391 7_1:+76899146 None:intergenic
ATGCCATGGCAAACACCAGC+AGG 0.535502 7_1:-76899371 Msa1039680:CDS
GAGAGAACTTGATCAAATGA+TGG 0.538479 7_1:+76904333 None:intergenic
GTGCCAATTAGGTTCTTCCA+TGG 0.538733 7_1:-76899224 Msa1039680:CDS
TTTGATTGCACAAGCTTGCA+TGG 0.540945 7_1:-76904262 Msa1039680:CDS
GCTCTGACACAGAGAAATCA+AGG 0.541696 7_1:+76904037 None:intergenic
TCTCTGTGTCAGAGCTTGCA+TGG 0.541979 7_1:-76904029 Msa1039680:CDS
ATGCAGTTGTTGCGTTGGAT+GGG 0.542294 7_1:-76903657 Msa1039680:CDS
CACCTGAAGGTTATATGCCA+TGG 0.546195 7_1:-76899385 Msa1039680:CDS
ATTGCGATTGCTTGTAACAA+TGG 0.557427 7_1:+76903474 None:intergenic
TTACTTGGCTCGTCCATGGA+AGG 0.560591 7_1:-76899456 Msa1039680:CDS
TGCAGATGCAGTTGTTGCGT+TGG 0.563751 7_1:-76903662 Msa1039680:intron
ATCAGTACTAGTTTCATGCA+AGG 0.565775 7_1:+76903759 None:intergenic
ACCAAGACACATGTATTGAA+GGG 0.567012 7_1:-76903915 Msa1039680:intron
TTTGTTATTTACATCAAGGA+GGG 0.568900 7_1:-76900376 Msa1039680:intron
GACAGTCTCATAGCACATGC+TGG 0.572051 7_1:-76901051 Msa1039680:CDS
CAAACACCAGCAGGTATCAC+AGG 0.573478 7_1:-76899362 Msa1039680:CDS
GTTGTTGCTAAGGATGGAAG+TGG 0.573650 7_1:-76900457 Msa1039680:CDS
ATCGCAATTTCATGCAAGGA+TGG 0.575589 7_1:-76903459 Msa1039680:CDS
ATACCTGCTGGTGTTTGCCA+TGG 0.578128 7_1:+76899368 None:intergenic
AACATCATGATCGTTGGTGA+TGG 0.582464 7_1:-76903508 Msa1039680:CDS
AAACGTGGCAGTTCGAAAAG+TGG 0.582606 7_1:+76903435 None:intergenic
GAGTGGGTTGATGACCGTGC+TGG 0.582880 7_1:-76900532 Msa1039680:CDS
GTTCTTGAGAAATCCTTCCA+TGG 0.584983 7_1:+76899443 None:intergenic
TGTGAAGAAGGGACTATACA+AGG 0.586315 7_1:-76903560 Msa1039680:CDS
TCTTGAGTTTGGATGTCTGA+GGG 0.587826 7_1:+76904294 None:intergenic
GTTGTTGCGTTGGATGGGAG+CGG 0.587962 7_1:-76903652 Msa1039680:CDS
AGCAATCGCAATTTCATGCA+AGG 0.589039 7_1:-76903463 Msa1039680:CDS
CATGTTATCTATGTGAAGAA+GGG 0.590596 7_1:-76903571 Msa1039680:CDS
CTTAAGAGCCTCAGTGATTG+TGG 0.591740 7_1:+76900426 None:intergenic
ATCACCAACGATCATGATGT+TGG 0.592216 7_1:+76903510 None:intergenic
GGTGATTTGATCACACCTGA+AGG 0.592420 7_1:-76899398 Msa1039680:CDS
ACGAAGGAAACCTCGAAGCA+TGG 0.597380 7_1:-76903957 Msa1039680:CDS
ATGACCAACATCATGATCGT+TGG 0.598022 7_1:-76903514 Msa1039680:CDS
ATCTTGAGTTTGGATGTCTG+AGG 0.599334 7_1:+76904293 None:intergenic
GAAGAGATGAAACAACCTGC+TGG 0.602235 7_1:-76900628 Msa1039680:CDS
GCTCGTTATGAATGTTTGTG+AGG 0.604269 7_1:+76904217 None:intergenic
CAGAACATTACTGATAAGCT+GGG 0.605848 7_1:+76903834 None:intergenic
ACCTTCAAAACCGCTACCGT+TGG 0.610244 7_1:-76900238 Msa1039680:intron
GATGAAAACAACGTGAGTCA+TGG 0.611888 7_1:+76900321 None:intergenic
GAAAAGGAAATTCACAAGCA+AGG 0.615432 7_1:+76904371 None:intergenic
CTTCTATGGCAAGTTGCTCG+CGG 0.617529 7_1:+76904073 None:intergenic
GCTTACCCTTTAGGTCTCCA+AGG 0.618807 7_1:-76903789 Msa1039680:CDS
ACCATACTTTCAAACTCGTG+AGG 0.619267 7_1:+76900803 None:intergenic
CATGGTCGTTAGGGGAGATG+AGG 0.619966 7_1:-76904011 Msa1039680:CDS
ACTTGCCATAGAAGATTGCA+AGG 0.620029 7_1:-76904064 Msa1039680:CDS
TTTCCATTGACGAATTCCAA+AGG 0.622348 7_1:-76900873 Msa1039680:CDS
TCTATGCATATGAGTAGCAA+TGG 0.623727 7_1:-76900685 Msa1039680:CDS
AAACAGCGTGTAAAATGGCA+AGG 0.624077 7_1:-76899284 Msa1039680:CDS
TGTTTATAAAGAGTATGTTG+AGG 0.626695 7_1:-76900353 Msa1039680:intron
AAGATACCTACCAACGGTAG+CGG 0.629830 7_1:+76900228 None:intergenic
GCACGGTCATCAACCCACTC+AGG 0.630741 7_1:+76900535 None:intergenic
GACAGAACTGCGCAGTACGA+AGG 0.633449 7_1:-76903973 Msa1039680:CDS
GAGATGAGGAGAATTCGAGC+CGG 0.635377 7_1:-76903997 Msa1039680:CDS
TGCTGGTCATAAAATGCAAG+AGG 0.637211 7_1:-76900719 Msa1039680:CDS
ATTTGTTATTTACATCAAGG+AGG 0.639398 7_1:-76900377 Msa1039680:CDS
TGTCTGAGGGAATTTCATCT+GGG 0.640715 7_1:+76904307 None:intergenic
ACATGTTTCTTGGTATGTGA+TGG 0.641994 7_1:+76900771 None:intergenic
GTACTGCGCAGTTCTGTCGC+CGG 0.644383 7_1:+76903978 None:intergenic
AGTTTGAAAGTATGGTTAAG+CGG 0.648997 7_1:-76900796 Msa1039680:CDS
AGAGCTTGCATGGTCGTTAG+GGG 0.652304 7_1:-76904019 Msa1039680:CDS
TGTCTCCTATTGCTATGACT+AGG 0.654035 7_1:+76903592 None:intergenic
CCTCGAAGCATGGCTAAGTG+CGG 0.658255 7_1:-76903947 Msa1039680:CDS
AAAGCCTACGTTAACTGTGA+CGG 0.658857 7_1:+76901188 None:intergenic
AACTCGTGAGGACTCTGTCG+AGG 0.675472 7_1:+76900815 None:intergenic
CTACTTAAATCTAAGCCGCA+CGG 0.678224 7_1:-76903691 Msa1039680:intron
TAACATCGGAACCAGGACCA+CGG 0.684516 7_1:+76899306 None:intergenic
AGAACTCTACTTACCAAACG+TGG 0.684668 7_1:+76903420 None:intergenic
GAAGTTTCCTAACACCAGCA+CGG 0.689688 7_1:+76900518 None:intergenic
GTCGCCGTCACAGTTAACGT+AGG 0.715024 7_1:-76901192 Msa1039680:CDS
TATGCTGAGTACAATAACCG+TGG 0.729093 7_1:-76899323 Msa1039680:CDS
GTTTCCTGAATGGATGACAG+AGG 0.756653 7_1:-76903725 Msa1039680:CDS
AAATTTCACCACAATCACTG+AGG 0.791509 7_1:-76900434 Msa1039680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATATATAGTAATAACT+AGG + chr7_1:76900978-76900997 None:intergenic 10.0%
!!! TGATAATTTTTTGATTATTT+GGG + chr7_1:76901575-76901594 None:intergenic 10.0%
!!! TTGATAATTTTTTGATTATT+TGG + chr7_1:76901576-76901595 None:intergenic 10.0%
!!! ATTTTTTTCTATAAAAAGAA+GGG + chr7_1:76901644-76901663 None:intergenic 10.0%
!!! AATTTTTTTCTATAAAAAGA+AGG + chr7_1:76901645-76901664 None:intergenic 10.0%
!! TTAAGTGTAAAAAATATATA+GGG + chr7_1:76903444-76903463 None:intergenic 10.0%
!! TTTAAGTGTAAAAAATATAT+AGG + chr7_1:76903445-76903464 None:intergenic 10.0%
!! TTAAAATTCTCAAATAGTTT+AGG + chr7_1:76901262-76901281 None:intergenic 15.0%
!! TAAGTGTAAAAAATATATAG+GGG + chr7_1:76903443-76903462 None:intergenic 15.0%
!! AACAAATAGTATTCATCAAT+TGG + chr7_1:76900945-76900964 None:intergenic 20.0%
!!! GTAGAATGTAATTAATTTGT+GGG - chr7_1:76901137-76901156 Msa1039680:CDS 20.0%
!! TAGAAATTGTTCAATAAAGA+GGG + chr7_1:76901205-76901224 None:intergenic 20.0%
!! ATTATGTAGTATCAAATAGT+TGG + chr7_1:76901433-76901452 None:intergenic 20.0%
!! ATAATCACATATAACAATGA+AGG + chr7_1:76902031-76902050 None:intergenic 20.0%
!! ATGAGAAAACGTAAATAAAA+TGG - chr7_1:76902067-76902086 Msa1039680:intron 20.0%
!! TGGAGATTGTATTAATAATA+AGG - chr7_1:76902087-76902106 Msa1039680:intron 20.0%
!! TACAATGAGACTTATAATAT+AGG - chr7_1:76902116-76902135 Msa1039680:intron 20.0%
!! ACAATGAGACTTATAATATA+GGG - chr7_1:76902117-76902136 Msa1039680:intron 20.0%
!! TGCTAAATATTAAAAATGTC+TGG - chr7_1:76902232-76902251 Msa1039680:intron 20.0%
!! GCTAAATATTAAAAATGTCT+GGG - chr7_1:76902233-76902252 Msa1039680:intron 20.0%
!! CTAAATATTAAAAATGTCTG+GGG - chr7_1:76902234-76902253 Msa1039680:intron 20.0%
!! TAAATATTAAAAATGTCTGG+GGG - chr7_1:76902235-76902254 Msa1039680:intron 20.0%
!! AAACTTCTTAATAAAATGAC+TGG - chr7_1:76903018-76903037 Msa1039680:intron 20.0%
!!! ATCTTTTTGGATACATATAT+TGG - chr7_1:76904101-76904120 Msa1039680:CDS 20.0%
! GTAAAAGGATAAGAATGAAA+AGG + chr7_1:76899168-76899187 None:intergenic 25.0%
! TGAATTGGTATATAGTGAAT+TGG - chr7_1:76900212-76900231 Msa1039680:intron 25.0%
!! AATCCAAGATAGTTATGTTT+TGG - chr7_1:76900593-76900612 Msa1039680:intron 25.0%
! CCATCATTAATCAAAGAAAA+TGG + chr7_1:76901049-76901068 None:intergenic 25.0%
!! CCATTTTCTTTGATTAATGA+TGG - chr7_1:76901046-76901065 Msa1039680:CDS 25.0%
!! CGTAGAATGTAATTAATTTG+TGG - chr7_1:76901136-76901155 Msa1039680:CDS 25.0%
! GTAGAAATTGTTCAATAAAG+AGG + chr7_1:76901206-76901225 None:intergenic 25.0%
! AATTATGTGTCTCAATTGTT+TGG - chr7_1:76901458-76901477 Msa1039680:intron 25.0%
! TTCATGAAATAAGCTAAACA+AGG - chr7_1:76901512-76901531 Msa1039680:intron 25.0%
!! TATTTGGGTTTAGCTAATTA+AGG + chr7_1:76901560-76901579 None:intergenic 25.0%
! AAATCAGTTGAAAAAATGTG+AGG + chr7_1:76901701-76901720 None:intergenic 25.0%
! ATGATGAACAATTTCAAAGT+TGG + chr7_1:76901726-76901745 None:intergenic 25.0%
! ATAGAAAAACACACTTTGAA+GGG - chr7_1:76901806-76901825 Msa1039680:intron 25.0%
! GTAACAATATGATGAAATGA+AGG + chr7_1:76901874-76901893 None:intergenic 25.0%
! TGTATATAAGAATGTCCTTA+AGG + chr7_1:76901934-76901953 None:intergenic 25.0%
!!! ATAAAACAATTTGTTGTACC+GGG + chr7_1:76901965-76901984 None:intergenic 25.0%
!!! CATAAAACAATTTGTTGTAC+CGG + chr7_1:76901966-76901985 None:intergenic 25.0%
! ACGTATCTAATATAGATTGA+AGG - chr7_1:76902195-76902214 Msa1039680:intron 25.0%
!! TTTGGAAAGTTGGTTAATAA+TGG + chr7_1:76902866-76902885 None:intergenic 25.0%
!! TGTTTATAAAGAGTATGTTG+AGG - chr7_1:76903167-76903186 Msa1039680:intron 25.0%
!!! GACTTTATTTTACAATCTGA+TGG + chr7_1:76903379-76903398 None:intergenic 25.0%
! ATAAGTACATATAACGAGTT+GGG + chr7_1:76903627-76903646 None:intergenic 25.0%
! AATAAGTACATATAACGAGT+TGG + chr7_1:76903628-76903647 None:intergenic 25.0%
!! AATTTTCTACAAATGCAGAA+TGG - chr7_1:76903773-76903792 Msa1039680:CDS 25.0%
!! TTTCTCAAGAACTATCTTTT+TGG - chr7_1:76904088-76904107 Msa1039680:CDS 25.0%
CTTGATCAAATGATGGTAAA+AGG + chr7_1:76899183-76899202 None:intergenic 30.0%
!! AACTAGTACTGATGAAAGTT+TGG - chr7_1:76899771-76899790 Msa1039680:intron 30.0%
ACATGTTATCTATGTGAAGA+AGG - chr7_1:76899948-76899967 Msa1039680:intron 30.0%
CATGTTATCTATGTGAAGAA+GGG - chr7_1:76899949-76899968 Msa1039680:intron 30.0%
! ACACACTCTTTTCAATATGT+AGG + chr7_1:76900185-76900204 None:intergenic 30.0%
!! GAACCATAGACTTCATTTTT+GGG - chr7_1:76900454-76900473 Msa1039680:CDS 30.0%
ATTCCCAAAAATGAAGTCTA+TGG + chr7_1:76900460-76900479 None:intergenic 30.0%
!! ATAGACTTCATTTTTGGGAA+TGG - chr7_1:76900459-76900478 Msa1039680:CDS 30.0%
! GTGATTGTAACCTTTTGTAA+TGG + chr7_1:76900531-76900550 None:intergenic 30.0%
TAACACATACATGAGTAGTA+TGG - chr7_1:76900674-76900693 Msa1039680:CDS 30.0%
TCTTTAATGACATGATAACC+AGG + chr7_1:76900813-76900832 None:intergenic 30.0%
ATAGTATTCATCAATTGGCT+TGG + chr7_1:76900940-76900959 None:intergenic 30.0%
TCTACCTAAGAATTGAACTT+GGG + chr7_1:76901376-76901395 None:intergenic 30.0%
TTCTACCTAAGAATTGAACT+TGG + chr7_1:76901377-76901396 None:intergenic 30.0%
TTCTTAGGTAGAACAATTCT+TGG - chr7_1:76901384-76901403 Msa1039680:intron 30.0%
!! TTGAGAGTATTGCTATACAT+AGG - chr7_1:76901603-76901622 Msa1039680:intron 30.0%
TTCTATAAAAAGAAGGGACA+CGG + chr7_1:76901638-76901657 None:intergenic 30.0%
AGTTGAAAAAATGTGAGGTT+TGG + chr7_1:76901696-76901715 None:intergenic 30.0%
GATAGAAAAACACACTTTGA+AGG - chr7_1:76901805-76901824 Msa1039680:intron 30.0%
! ATACGTACTTGGTGAAAAAA+GGG + chr7_1:76901909-76901928 None:intergenic 30.0%
!! TATAGATTGAAGGTGTTGAT+AGG - chr7_1:76902205-76902224 Msa1039680:intron 30.0%
!! ATAGATTGAAGGTGTTGATA+GGG - chr7_1:76902206-76902225 Msa1039680:intron 30.0%
TACCTTCTTATTAGTTGCTA+TGG - chr7_1:76902303-76902322 Msa1039680:intron 30.0%
AACCATAGCAACTAATAAGA+AGG + chr7_1:76902308-76902327 None:intergenic 30.0%
TTTAACAACAAAAAGGAACC+TGG - chr7_1:76902352-76902371 Msa1039680:intron 30.0%
! CATTCCTTTTTGTAATCTGT+TGG + chr7_1:76902445-76902464 None:intergenic 30.0%
AGATTACAAAAAGGAATGTG+AGG - chr7_1:76902447-76902466 Msa1039680:intron 30.0%
! AGTTTGAAAGTATGGTTAAG+CGG - chr7_1:76902724-76902743 Msa1039680:intron 30.0%
! TTTCATCTCTTCGAATGTTT+TGG + chr7_1:76902884-76902903 None:intergenic 30.0%
TTCTTAATAAAATGACTGGC+AGG - chr7_1:76903022-76903041 Msa1039680:intron 30.0%
GGCAATAAAAACTTCATTGA+TGG - chr7_1:76903252-76903271 Msa1039680:intron 30.0%
AAAAACTTCATTGATGGAGT+TGG - chr7_1:76903258-76903277 Msa1039680:intron 30.0%
AATAAAGTCTGCAAATCTGT+TGG - chr7_1:76903390-76903409 Msa1039680:intron 30.0%
TTAATCTAGAAGTCTACAGT+TGG + chr7_1:76903495-76903514 None:intergenic 30.0%
ATCCAATTTAGCAAATCGTT+GGG - chr7_1:76903567-76903586 Msa1039680:CDS 30.0%
TAAGTACATATAACGAGTTG+GGG + chr7_1:76903626-76903645 None:intergenic 30.0%
ATTACTGGAGATTTCTTTGT+TGG - chr7_1:76903672-76903691 Msa1039680:intron 30.0%
AGAAAATTGATCTGTCAGAT+TGG + chr7_1:76903761-76903780 None:intergenic 30.0%
AGTCTAACTGGATAGTATTT+GGG + chr7_1:76904032-76904051 None:intergenic 30.0%
! TTTTACACGCTGTTTAACAT+CGG + chr7_1:76904231-76904250 None:intergenic 30.0%
ATGTTAAACAGCGTGTAAAA+TGG - chr7_1:76904231-76904250 Msa1039680:CDS 30.0%
GTTAAGACTATTACTTCAGA+AGG - chr7_1:76904260-76904279 Msa1039680:CDS 30.0%
GAAAAGGAAATTCACAAGCA+AGG + chr7_1:76899152-76899171 None:intergenic 35.0%
GAGAGAACTTGATCAAATGA+TGG + chr7_1:76899190-76899209 None:intergenic 35.0%
AAGCTTGCATATCTTGAGTT+TGG + chr7_1:76899240-76899259 None:intergenic 35.0%
TTAATGACAGAAGTTGGACT+TGG + chr7_1:76899346-76899365 None:intergenic 35.0%
GATCTTTGTCATGTTGTTGA+TGG + chr7_1:76899407-76899426 None:intergenic 35.0%
AACCAAGACACATGTATTGA+AGG - chr7_1:76899604-76899623 Msa1039680:intron 35.0%
ACCAAGACACATGTATTGAA+GGG - chr7_1:76899605-76899624 Msa1039680:intron 35.0%
ACATGTATTGAAGGGTTTGA+AGG - chr7_1:76899613-76899632 Msa1039680:intron 35.0%
CAGAACATTACTGATAAGCT+GGG + chr7_1:76899689-76899708 None:intergenic 35.0%
ACAGAACATTACTGATAAGC+TGG + chr7_1:76899690-76899709 None:intergenic 35.0%
! ATCAGTACTAGTTTCATGCA+AGG + chr7_1:76899764-76899783 None:intergenic 35.0%
! AAAGTTTGGAGTTTCCTGAA+TGG - chr7_1:76899785-76899804 Msa1039680:intron 35.0%
! TAACAGCTTCGTTGATTGTA+CGG + chr7_1:76899900-76899919 None:intergenic 35.0%
ATTGCGATTGCTTGTAACAA+TGG + chr7_1:76900049-76900068 None:intergenic 35.0%
AACAGTATATCTCTAGCGTA+AGG - chr7_1:76900128-76900147 Msa1039680:intron 35.0%
GAGTGTGTTAGAGAATGAAT+TGG - chr7_1:76900197-76900216 Msa1039680:intron 35.0%
TGTTAATGTGTAGCTGTATC+TGG - chr7_1:76900249-76900268 Msa1039680:CDS 35.0%
GTTAATGTGTAGCTGTATCT+GGG - chr7_1:76900250-76900269 Msa1039680:CDS 35.0%
TACACCTAAAGAATGCAGAT+TGG + chr7_1:76900362-76900381 None:intergenic 35.0%
TTCTTTAGGTGTAGCATAGA+AGG - chr7_1:76900369-76900388 Msa1039680:intron 35.0%
TTCCATAGATTTCGCATTCA+CGG + chr7_1:76900437-76900456 None:intergenic 35.0%
! GGAACCATAGACTTCATTTT+TGG - chr7_1:76900453-76900472 Msa1039680:CDS 35.0%
AGTTCCACTTCCATTACAAA+AGG - chr7_1:76900518-76900537 Msa1039680:CDS 35.0%
!! GTAACCTTTTGTAATGGAAG+TGG + chr7_1:76900525-76900544 None:intergenic 35.0%
AGGCCAAAACATAACTATCT+TGG + chr7_1:76900599-76900618 None:intergenic 35.0%
!! GTTCTAGAATATTCCTTCCA+AGG + chr7_1:76900645-76900664 None:intergenic 35.0%
ACTTTGCATTAGACACTTTG+TGG - chr7_1:76900730-76900749 Msa1039680:CDS 35.0%
TACGGTGAATACAGGAATTA+TGG - chr7_1:76900753-76900772 Msa1039680:CDS 35.0%
TGTTTAGTGAGTAGATGTTG+AGG - chr7_1:76901086-76901105 Msa1039680:intron 35.0%
TGCAGATATAGTGTATGGAT+CGG - chr7_1:76901160-76901179 Msa1039680:CDS 35.0%
TAACCACTTGAACACTTGTT+TGG + chr7_1:76901319-76901338 None:intergenic 35.0%
AGAACCCAAGTTCAATTCTT+AGG - chr7_1:76901369-76901388 Msa1039680:intron 35.0%
! GAGTATTGCTATACATAGGT+TGG - chr7_1:76901607-76901626 Msa1039680:intron 35.0%
! ATGAAATGAAGGACTTGTTC+AGG + chr7_1:76901863-76901882 None:intergenic 35.0%
! GATACGTACTTGGTGAAAAA+AGG + chr7_1:76901910-76901929 None:intergenic 35.0%
CTTATATACATTCCATCTCC+CGG - chr7_1:76901944-76901963 Msa1039680:intron 35.0%
ATATTAAAAATGTCTGGGGG+AGG - chr7_1:76902238-76902257 Msa1039680:intron 35.0%
AATAAGAGACTCGCCATAAT+TGG - chr7_1:76902274-76902293 Msa1039680:intron 35.0%
! CGTAGGCTTTAACAACAAAA+AGG - chr7_1:76902345-76902364 Msa1039680:intron 35.0%
! TTTGAAGTTTGATCTTCTCC+AGG + chr7_1:76902373-76902392 None:intergenic 35.0%
AAAAACTCATCTCCTTCAAG+AGG - chr7_1:76902567-76902586 Msa1039680:intron 35.0%
TTTCCATTGACGAATTCCAA+AGG - chr7_1:76902647-76902666 Msa1039680:intron 35.0%
AATTCCAAAGGTCACTAGAA+AGG - chr7_1:76902659-76902678 Msa1039680:intron 35.0%
ACATGTTTCTTGGTATGTGA+TGG + chr7_1:76902752-76902771 None:intergenic 35.0%
CACATACCAAGAAACATGTT+TGG - chr7_1:76902753-76902772 Msa1039680:intron 35.0%
AAGCATCCAAACATGTTTCT+TGG + chr7_1:76902762-76902781 None:intergenic 35.0%
! TTGCATTTTATGACCAGCAT+CGG + chr7_1:76902800-76902819 None:intergenic 35.0%
TCTATGCATATGAGTAGCAA+TGG - chr7_1:76902835-76902854 Msa1039680:intron 35.0%
!!! CTTCGAATGTTTTGGAAAGT+TGG + chr7_1:76902876-76902895 None:intergenic 35.0%
!!! CTTTTGAAGGAAAGTGTTGA+TGG - chr7_1:76902922-76902941 Msa1039680:intron 35.0%
AAATTTCACCACAATCACTG+AGG - chr7_1:76903086-76903105 Msa1039680:intron 35.0%
!! ATGACTCACGTTGTTTTCAT+CGG - chr7_1:76903201-76903220 Msa1039680:intron 35.0%
TCATGCTTAAGTTATGTGCA+TGG - chr7_1:76903315-76903334 Msa1039680:intron 35.0%
ATCATCTACAAACAGCTGTA+TGG - chr7_1:76903464-76903483 Msa1039680:CDS 35.0%
TAAATTGGATCCACTAAGGT+CGG + chr7_1:76903557-76903576 None:intergenic 35.0%
TTGCTAAATTGGATCCACTA+AGG + chr7_1:76903561-76903580 None:intergenic 35.0%
GATCCAATTTAGCAAATCGT+TGG - chr7_1:76903566-76903585 Msa1039680:CDS 35.0%
!! ATCCCAACGATTTGCTAAAT+TGG + chr7_1:76903572-76903591 None:intergenic 35.0%
AATTTAGCAAATCGTTGGGA+TGG - chr7_1:76903571-76903590 Msa1039680:CDS 35.0%
! ATAACGAGTTGGGGAAAAAA+TGG + chr7_1:76903617-76903636 None:intergenic 35.0%
CATTGAATTGCAGCTATTAC+TGG - chr7_1:76903657-76903676 Msa1039680:CDS 35.0%
!! TTCTTTGTTGGCATTGGTAT+TGG - chr7_1:76903684-76903703 Msa1039680:intron 35.0%
!!! ATTGGTTTTGAAAACTCTGC+TGG - chr7_1:76903702-76903721 Msa1039680:CDS 35.0%
TTCTACAAATGCAGAATGGA+TGG - chr7_1:76903777-76903796 Msa1039680:CDS 35.0%
TACCTGAGATAACACAATCA+CGG + chr7_1:76903845-76903864 None:intergenic 35.0%
!!! ATGCATTGTTGGTTTTCCAA+TGG + chr7_1:76903933-76903952 None:intergenic 35.0%
AAGGAAAAAAACCAACCATC+AGG - chr7_1:76903972-76903991 Msa1039680:CDS 35.0%
GAGTCTAACTGGATAGTATT+TGG + chr7_1:76904033-76904052 None:intergenic 35.0%
ACTCAAGAACAAAGCTTACT+TGG - chr7_1:76904049-76904068 Msa1039680:CDS 35.0%
TGTCTGAGGGAATTTCATCT+GGG + chr7_1:76899216-76899235 None:intergenic 40.0%
ATGTCTGAGGGAATTTCATC+TGG + chr7_1:76899217-76899236 None:intergenic 40.0%
TCTTGAGTTTGGATGTCTGA+GGG + chr7_1:76899229-76899248 None:intergenic 40.0%
ATCTTGAGTTTGGATGTCTG+AGG + chr7_1:76899230-76899249 None:intergenic 40.0%
TTTGATTGCACAAGCTTGCA+TGG - chr7_1:76899258-76899277 Msa1039680:CDS 40.0%
! TGTTTGTGAGGCATGAGTTT+TGG + chr7_1:76899294-76899313 None:intergenic 40.0%
GCTCGTTATGAATGTTTGTG+AGG + chr7_1:76899306-76899325 None:intergenic 40.0%
GCAGCATTAATGACAGAAGT+TGG + chr7_1:76899352-76899371 None:intergenic 40.0%
ACCACAATCAATGAAGCCAT+AGG - chr7_1:76899379-76899398 Msa1039680:CDS 40.0%
! ACCTATGGCTTCATTGATTG+TGG + chr7_1:76899383-76899402 None:intergenic 40.0%
ACTTGCCATAGAAGATTGCA+AGG - chr7_1:76899456-76899475 Msa1039680:CDS 40.0%
ACCCTTCAATACATGTGTCT+TGG + chr7_1:76899609-76899628 None:intergenic 40.0%
CGTCTTGAGAGTTACATTAG+TGG - chr7_1:76899646-76899665 Msa1039680:intron 40.0%
AGCTTAATCGCTTACCCTTT+AGG - chr7_1:76899722-76899741 Msa1039680:intron 40.0%
CTACTTAAATCTAAGCCGCA+CGG - chr7_1:76899829-76899848 Msa1039680:intron 40.0%
TGTCTCCTATTGCTATGACT+AGG + chr7_1:76899931-76899950 None:intergenic 40.0%
TGTGAAGAAGGGACTATACA+AGG - chr7_1:76899960-76899979 Msa1039680:intron 40.0%
ATGACCAACATCATGATCGT+TGG - chr7_1:76900006-76900025 Msa1039680:intron 40.0%
ATCACCAACGATCATGATGT+TGG + chr7_1:76900013-76900032 None:intergenic 40.0%
! AACATCATGATCGTTGGTGA+TGG - chr7_1:76900012-76900031 Msa1039680:intron 40.0%
!! ATGATCGTTGGTGATGGTAT+TGG - chr7_1:76900018-76900037 Msa1039680:intron 40.0%
AGCAATCGCAATTTCATGCA+AGG - chr7_1:76900057-76900076 Msa1039680:intron 40.0%
ATCGCAATTTCATGCAAGGA+TGG - chr7_1:76900061-76900080 Msa1039680:intron 40.0%
AGAACTCTACTTACCAAACG+TGG + chr7_1:76900103-76900122 None:intergenic 40.0%
CAGACCAATCTGCATTCTTT+AGG - chr7_1:76900355-76900374 Msa1039680:intron 40.0%
TACCGTGAATGCGAAATCTA+TGG - chr7_1:76900432-76900451 Msa1039680:CDS 40.0%
AAGGTTACAATCACAGCTCA+AGG - chr7_1:76900537-76900556 Msa1039680:CDS 40.0%
TTACAATCACAGCTCAAGGT+AGG - chr7_1:76900541-76900560 Msa1039680:CDS 40.0%
AAAAGTCCACATCAAAGCAC+AGG - chr7_1:76900564-76900583 Msa1039680:intron 40.0%
GCCTCACAACCTACATATTT+GGG - chr7_1:76900615-76900634 Msa1039680:CDS 40.0%
CCTCACAACCTACATATTTG+GGG - chr7_1:76900616-76900635 Msa1039680:CDS 40.0%
GCATTAGACACTTTGTGGTA+CGG - chr7_1:76900735-76900754 Msa1039680:CDS 40.0%
GAATACAGGAATTATGGACC+CGG - chr7_1:76900759-76900778 Msa1039680:CDS 40.0%
GTGAACTTAACACCTGTTCT+AGG + chr7_1:76900894-76900913 None:intergenic 40.0%
GCAGATATAGTGTATGGATC+GGG - chr7_1:76901161-76901180 Msa1039680:CDS 40.0%
CACTTGAACACTTGTTTGGT+TGG + chr7_1:76901315-76901334 None:intergenic 40.0%
CAACCAAACAAGTGTTCAAG+TGG - chr7_1:76901313-76901332 Msa1039680:intron 40.0%
TCTTCTAAACGATTCGCTCT+TGG + chr7_1:76901352-76901371 None:intergenic 40.0%
GTATCAAATAGTTGGTCCGT+GGG + chr7_1:76901425-76901444 None:intergenic 40.0%
AGTATCAAATAGTTGGTCCG+TGG + chr7_1:76901426-76901445 None:intergenic 40.0%
GCCTTAATAAGCGTCAAACA+AGG - chr7_1:76901534-76901553 Msa1039680:intron 40.0%
!! GCCTTGTTTGACGCTTATTA+AGG + chr7_1:76901538-76901557 None:intergenic 40.0%
!! ACACTTTGAAGGGCTTTGAA+GGG - chr7_1:76901816-76901835 Msa1039680:intron 40.0%
ACCAAGTACGTATCTCCTTA+AGG - chr7_1:76901916-76901935 Msa1039680:intron 40.0%
TCCTTAAGGAGATACGTACT+TGG + chr7_1:76901920-76901939 None:intergenic 40.0%
GAAGGTAGAGACACCAATTA+TGG + chr7_1:76902290-76902309 None:intergenic 40.0%
AAAGCCTACGTTAACTGTGA+CGG + chr7_1:76902335-76902354 None:intergenic 40.0%
CGCACCAACAGATTACAAAA+AGG - chr7_1:76902438-76902457 Msa1039680:intron 40.0%
! GCGATCTTGATGAGTTCTTT+TGG + chr7_1:76902508-76902527 None:intergenic 40.0%
!!! CATCTTTTTCAGCCTCTTGA+AGG + chr7_1:76902582-76902601 None:intergenic 40.0%
!! TGACCTTTGGAATTCGTCAA+TGG + chr7_1:76902653-76902672 None:intergenic 40.0%
! TGAACCTTTCTAGTGACCTT+TGG + chr7_1:76902666-76902685 None:intergenic 40.0%
TCCTCACGAGTTTGAAAGTA+TGG - chr7_1:76902716-76902735 Msa1039680:intron 40.0%
ACCATACTTTCAAACTCGTG+AGG + chr7_1:76902720-76902739 None:intergenic 40.0%
TGCTGGTCATAAAATGCAAG+AGG - chr7_1:76902801-76902820 Msa1039680:intron 40.0%
! GATGGAGAAGAGGATGTTTT+AGG - chr7_1:76902940-76902959 Msa1039680:intron 40.0%
!! GAAGAGGATGTTTTAGGTCA+TGG - chr7_1:76902946-76902965 Msa1039680:intron 40.0%
! TGATTTTGAGCTTCCTGAGT+GGG - chr7_1:76902972-76902991 Msa1039680:intron 40.0%
! CATGTTGTTGTTGCTAAGGA+TGG - chr7_1:76903057-76903076 Msa1039680:intron 40.0%
GATGAAAACAACGTGAGTCA+TGG + chr7_1:76903202-76903221 None:intergenic 40.0%
GCATGAAAGATACCTACCAA+CGG + chr7_1:76903301-76903320 None:intergenic 40.0%
GGAGATTTCTTTGTTGGCAT+TGG - chr7_1:76903678-76903697 Msa1039680:intron 40.0%
TATGAGCGTAAAGTGTGTCT+TGG + chr7_1:76903806-76903825 None:intergenic 40.0%
TACCGTGATTGTGTTATCTC+AGG - chr7_1:76903840-76903859 Msa1039680:CDS 40.0%
ATCACCAAAGACGAAGTCAA+TGG + chr7_1:76903868-76903887 None:intergenic 40.0%
!!! GTTGGTTTTCCAATGGCTTT+CGG + chr7_1:76903926-76903945 None:intergenic 40.0%
GGATGATTAATCCTGATGGT+TGG + chr7_1:76903986-76904005 None:intergenic 40.0%
CCTTGGATGATTAATCCTGA+TGG + chr7_1:76903990-76904009 None:intergenic 40.0%
CCATCAGGATTAATCATCCA+AGG - chr7_1:76903987-76904006 Msa1039680:CDS 40.0%
TCAGGATTAATCATCCAAGG+AGG - chr7_1:76903990-76904009 Msa1039680:CDS 40.0%
! GCTTTGTTCTTGAGTCTAAC+TGG + chr7_1:76904044-76904063 None:intergenic 40.0%
GTTCTTGAGAAATCCTTCCA+TGG + chr7_1:76904080-76904099 None:intergenic 40.0%
TATGCTGAGTACAATAACCG+TGG - chr7_1:76904197-76904216 Msa1039680:CDS 40.0%
AAACAGCGTGTAAAATGGCA+AGG - chr7_1:76904236-76904255 Msa1039680:CDS 40.0%
!!! CAGCTAGTTTTGTGCCAATT+AGG - chr7_1:76904285-76904304 Msa1039680:CDS 40.0%
TCTCCATGGAAGAACCTAAT+TGG + chr7_1:76904302-76904321 None:intergenic 40.0%
TCCATGGAGATGATTGGATT+AGG - chr7_1:76904312-76904331 Msa1039680:CDS 40.0%
CCATGGAGATGATTGGATTA+GGG - chr7_1:76904313-76904332 Msa1039680:CDS 40.0%
ACTAGAGTTCCTTATTCTCC+AGG - chr7_1:76904338-76904357 Msa1039680:CDS 40.0%
CATAACGAGCTAACCAGAAC+AGG - chr7_1:76899316-76899335 Msa1039680:CDS 45.0%
TGACAGAAGTTGGACTTGGA+GGG + chr7_1:76899342-76899361 None:intergenic 45.0%
ATGACAGAAGTTGGACTTGG+AGG + chr7_1:76899343-76899362 None:intergenic 45.0%
!! CATGTTGTTGATGGCACCTA+TGG + chr7_1:76899398-76899417 None:intergenic 45.0%
GAGCTCCTTGCAATCTTCTA+TGG + chr7_1:76899464-76899483 None:intergenic 45.0%
GCTCTGACACAGAGAAATCA+AGG + chr7_1:76899486-76899505 None:intergenic 45.0%
GTGTTCCTTGGAGACCTAAA+GGG + chr7_1:76899739-76899758 None:intergenic 45.0%
AGTGTTCCTTGGAGACCTAA+AGG + chr7_1:76899740-76899759 None:intergenic 45.0%
TCATGCAAGGTAGTGTTCCT+TGG + chr7_1:76899751-76899770 None:intergenic 45.0%
GTTTCCTGAATGGATGACAG+AGG - chr7_1:76899795-76899814 Msa1039680:intron 45.0%
ATGCAGTTGTTGCGTTGGAT+GGG - chr7_1:76899863-76899882 Msa1039680:intron 45.0%
CAGCTCCTAGTCATAGCAAT+AGG - chr7_1:76899923-76899942 Msa1039680:intron 45.0%
AAACGTGGCAGTTCGAAAAG+TGG + chr7_1:76900088-76900107 None:intergenic 45.0%
! ACTTTTCGAACTGCCACGTT+TGG - chr7_1:76900087-76900106 Msa1039680:intron 45.0%
ATGTGTAGCTGTATCTGGGA+AGG - chr7_1:76900254-76900273 Msa1039680:CDS 45.0%
TGTGTAGCTGTATCTGGGAA+GGG - chr7_1:76900255-76900274 Msa1039680:CDS 45.0%
AGTGTGCGTAAAGTGTGTCT+TGG + chr7_1:76900398-76900417 None:intergenic 45.0%
GGCCTCACAACCTACATATT+TGG - chr7_1:76900614-76900633 Msa1039680:CDS 45.0%
CCCCAAATATGTAGGTTGTG+AGG + chr7_1:76900619-76900638 None:intergenic 45.0%
CACAACCTACATATTTGGGG+AGG - chr7_1:76900619-76900638 Msa1039680:CDS 45.0%
AGTAGTATGGTTCAACCTCG+AGG - chr7_1:76900687-76900706 Msa1039680:CDS 45.0%
GTAGTATGGTTCAACCTCGA+GGG - chr7_1:76900688-76900707 Msa1039680:CDS 45.0%
CTTTGTGGTACGGTGAATAC+AGG - chr7_1:76900745-76900764 Msa1039680:CDS 45.0%
!! TTCTGCCGCCGGTTATTTTA+CGG - chr7_1:76900836-76900855 Msa1039680:CDS 45.0%
CTGAACCGTAAAATAACCGG+CGG + chr7_1:76900844-76900863 None:intergenic 45.0%
CCGCTGAACCGTAAAATAAC+CGG + chr7_1:76900847-76900866 None:intergenic 45.0%
!! CCGGTTATTTTACGGTTCAG+CGG - chr7_1:76900844-76900863 Msa1039680:intron 45.0%
ACAGGTGTTAAGTTCACAGC+AGG - chr7_1:76900897-76900916 Msa1039680:CDS 45.0%
CAGGTGTTAAGTTCACAGCA+GGG - chr7_1:76900898-76900917 Msa1039680:CDS 45.0%
GTGGGTGCAGATATAGTGTA+TGG - chr7_1:76901155-76901174 Msa1039680:CDS 45.0%
GCCAGAATATCCTTAACCCA+CGG - chr7_1:76901406-76901425 Msa1039680:intron 45.0%
! TCCGTGGGTTAAGGATATTC+TGG + chr7_1:76901410-76901429 None:intergenic 45.0%
! AATAGTTGGTCCGTGGGTTA+AGG + chr7_1:76901419-76901438 None:intergenic 45.0%
! CACACTTTGAAGGGCTTTGA+AGG - chr7_1:76901815-76901834 Msa1039680:intron 45.0%
!! CAATTTGTTGTACCGGGAGA+TGG + chr7_1:76901959-76901978 None:intergenic 45.0%
AGAGTCACGCGTATCTCAAT+CGG - chr7_1:76902393-76902412 Msa1039680:intron 45.0%
ACCATCGCAAAAATCAGCGA+AGG - chr7_1:76902538-76902557 Msa1039680:intron 45.0%
!!! TCCTTCGCTGATTTTTGCGA+TGG + chr7_1:76902542-76902561 None:intergenic 45.0%
GAGAATACTACAACCGATGC+TGG - chr7_1:76902784-76902803 Msa1039680:intron 45.0%
GAAGAGATGAAACAACCTGC+TGG - chr7_1:76902892-76902911 Msa1039680:intron 45.0%
!! GGAAAGTGTTGATGGAGAAG+AGG - chr7_1:76902930-76902949 Msa1039680:intron 45.0%
!! GAGGATGTTTTAGGTCATGG+TGG - chr7_1:76902949-76902968 Msa1039680:intron 45.0%
! GTGATTTTGAGCTTCCTGAG+TGG - chr7_1:76902971-76902990 Msa1039680:intron 45.0%
GAAGTTTCCTAACACCAGCA+CGG + chr7_1:76903005-76903024 None:intergenic 45.0%
AATGACTGGCAGGAAACTTC+AGG - chr7_1:76903032-76903051 Msa1039680:intron 45.0%
! GGCTCATGTTGTTGTTGCTA+AGG - chr7_1:76903053-76903072 Msa1039680:intron 45.0%
GTTGTTGCTAAGGATGGAAG+TGG - chr7_1:76903063-76903082 Msa1039680:intron 45.0%
CTTAAGAGCCTCAGTGATTG+TGG + chr7_1:76903097-76903116 None:intergenic 45.0%
!! CACGTTGTTTTCATCGGTGA+TGG - chr7_1:76903207-76903226 Msa1039680:intron 45.0%
!! GTTGTTTTCATCGGTGATGG+TGG - chr7_1:76903210-76903229 Msa1039680:intron 45.0%
GGTAGAAAGACACGCATTAC+TGG - chr7_1:76903231-76903250 Msa1039680:intron 45.0%
AAGATACCTACCAACGGTAG+CGG + chr7_1:76903295-76903314 None:intergenic 45.0%
! GCAACTGCTTGATGCTTTTC+TGG + chr7_1:76903729-76903748 None:intergenic 45.0%
TCTGTCAGATTGGACTCTCA+AGG + chr7_1:76903751-76903770 None:intergenic 45.0%
ATCACGGTAGAATTGACGCA+TGG + chr7_1:76903829-76903848 None:intergenic 45.0%
!! GGTACCATTGACTTCGTCTT+TGG - chr7_1:76903861-76903880 Msa1039680:CDS 45.0%
!!! GCAGTTTTGGAGAACAGCAA+TGG + chr7_1:76903892-76903911 None:intergenic 45.0%
GTGCAGTCACAATGCATTGT+TGG + chr7_1:76903944-76903963 None:intergenic 45.0%
CAATGCATTGTGACTGCACA+AGG - chr7_1:76903945-76903964 Msa1039680:CDS 45.0%
CATCCAAGGAGGTTCAATTG+TGG - chr7_1:76904001-76904020 Msa1039680:CDS 45.0%
GGTGATTTGATCACACCTGA+AGG - chr7_1:76904122-76904141 Msa1039680:CDS 45.0%
CACCTGAAGGTTATATGCCA+TGG - chr7_1:76904135-76904154 Msa1039680:intron 45.0%
TGCCATGGCATATAACCTTC+AGG + chr7_1:76904140-76904159 None:intergenic 45.0%
GTGCCAATTAGGTTCTTCCA+TGG - chr7_1:76904296-76904315 Msa1039680:CDS 45.0%
GGTTCTTCCATGGAGATGAT+TGG - chr7_1:76904306-76904325 Msa1039680:CDS 45.0%
CCCTAATCCAATCATCTCCA+TGG + chr7_1:76904316-76904335 None:intergenic 45.0%
TTAGTCGCTCCTGGAGAATA+AGG + chr7_1:76904350-76904369 None:intergenic 45.0%
!! CAATGAGTTGGTCTTGAAGG+AGG + chr7_1:76904377-76904396 None:intergenic 45.0%
CTTCTATGGCAAGTTGCTCG+CGG + chr7_1:76899450-76899469 None:intergenic 50.0%
TCTCTGTGTCAGAGCTTGCA+TGG - chr7_1:76899491-76899510 Msa1039680:intron 50.0%
TCAGAGCTTGCATGGTCGTT+AGG - chr7_1:76899499-76899518 Msa1039680:intron 50.0%
CAGAGCTTGCATGGTCGTTA+GGG - chr7_1:76899500-76899519 Msa1039680:intron 50.0%
AGAGCTTGCATGGTCGTTAG+GGG - chr7_1:76899501-76899520 Msa1039680:intron 50.0%
GAGATGAGGAGAATTCGAGC+CGG - chr7_1:76899523-76899542 Msa1039680:intron 50.0%
ACGAAGGAAACCTCGAAGCA+TGG - chr7_1:76899563-76899582 Msa1039680:intron 50.0%
GCTTACCCTTTAGGTCTCCA+AGG - chr7_1:76899731-76899750 Msa1039680:intron 50.0%
TCAGCCTCTGTCATCCATTC+AGG + chr7_1:76899802-76899821 None:intergenic 50.0%
GCATCTGCAATCTTACCGTG+CGG + chr7_1:76899847-76899866 None:intergenic 50.0%
TGCAGATGCAGTTGTTGCGT+TGG - chr7_1:76899858-76899877 Msa1039680:intron 50.0%
GATGCAGTTGTTGCGTTGGA+TGG - chr7_1:76899862-76899881 Msa1039680:intron 50.0%
TGGGAAGGGTTTCATTGCGA+GGG - chr7_1:76900269-76900288 Msa1039680:CDS 50.0%
TTGCGAGGGACATGACATTC+CGG - chr7_1:76900283-76900302 Msa1039680:CDS 50.0%
ATGACATTCCGGAACACTGC+TGG - chr7_1:76900294-76900313 Msa1039680:CDS 50.0%
TGAATCGACACGCAATGCCA+CGG + chr7_1:76900337-76900356 None:intergenic 50.0%
GTGAAGCCTGTGCTTTGATG+TGG + chr7_1:76900573-76900592 None:intergenic 50.0%
CAAGGCCTCCCCAAATATGT+AGG + chr7_1:76900627-76900646 None:intergenic 50.0%
CTACATATTTGGGGAGGCCT+TGG - chr7_1:76900625-76900644 Msa1039680:CDS 50.0%
ATATTTGGGGAGGCCTTGGA+AGG - chr7_1:76900629-76900648 Msa1039680:CDS 50.0%
ATTAAAGACGCTTCTGCCGC+CGG - chr7_1:76900825-76900844 Msa1039680:CDS 50.0%
ACGGTTCAGCGGTTCCTTAA+CGG - chr7_1:76900855-76900874 Msa1039680:intron 50.0%
GGTTCATGGTTGCCTAGAAC+AGG - chr7_1:76900879-76900898 Msa1039680:CDS 50.0%
GTTGAGAGCTAGCTAAGAGG+AGG + chr7_1:76901672-76901691 None:intergenic 50.0%
GGAGTTGAGAGCTAGCTAAG+AGG + chr7_1:76901675-76901694 None:intergenic 50.0%
!! AGGGCTTTGAAGGGCTTTGA+AGG - chr7_1:76901825-76901844 Msa1039680:intron 50.0%
!! GCTTTGAAGGGCTTTGAAGG+AGG - chr7_1:76901828-76901847 Msa1039680:intron 50.0%
GGCGAGTCTCTTATTCCTCT+TGG + chr7_1:76902269-76902288 None:intergenic 50.0%
GACAGTCTCATAGCACATGC+TGG - chr7_1:76902469-76902488 Msa1039680:intron 50.0%
GGACTCTGTCGAGGCTATTA+AGG + chr7_1:76902699-76902718 None:intergenic 50.0%
TTCAAAAGACGACGACCAGC+AGG + chr7_1:76902910-76902929 None:intergenic 50.0%
! TGCTGGTCGTCGTCTTTTGA+AGG - chr7_1:76902909-76902928 Msa1039680:intron 50.0%
! TTGATGACCGTGCTGGTGTT+AGG - chr7_1:76902995-76903014 Msa1039680:intron 50.0%
ACCTTCAAAACCGCTACCGT+TGG - chr7_1:76903282-76903301 Msa1039680:intron 50.0%
!! ACCAACGGTAGCGGTTTTGA+AGG + chr7_1:76903286-76903305 None:intergenic 50.0%
TCAAAACCGCTACCGTTGGT+AGG - chr7_1:76903286-76903305 Msa1039680:intron 50.0%
CAGTCTACATCCGACCTTAG+TGG - chr7_1:76903544-76903563 Msa1039680:CDS 50.0%
!! GGACGACGAAAGTGCAGTTT+TGG + chr7_1:76903905-76903924 None:intergenic 50.0%
TTTCGTCGTCCGAAAGCCAT+TGG - chr7_1:76903914-76903933 Msa1039680:intron 50.0%
GCATTGTGACTGCACAAGGT+AGG - chr7_1:76903949-76903968 Msa1039680:CDS 50.0%
TGTGACTGCACAAGGTAGGA+AGG - chr7_1:76903953-76903972 Msa1039680:CDS 50.0%
CTGCCACAATTGAACCTCCT+TGG + chr7_1:76904007-76904026 None:intergenic 50.0%
! AAGCTTACTTGGCTCGTCCA+TGG - chr7_1:76904060-76904079 Msa1039680:CDS 50.0%
! TTACTTGGCTCGTCCATGGA+AGG - chr7_1:76904064-76904083 Msa1039680:CDS 50.0%
ATACCTGCTGGTGTTTGCCA+TGG + chr7_1:76904155-76904174 None:intergenic 50.0%
CAAACACCAGCAGGTATCAC+AGG - chr7_1:76904158-76904177 Msa1039680:intron 50.0%
TCAGTTCCTGTGATACCTGC+TGG + chr7_1:76904167-76904186 None:intergenic 50.0%
GAGTACAATAACCGTGGTCC+TGG - chr7_1:76904203-76904222 Msa1039680:CDS 50.0%
TAACATCGGAACCAGGACCA+CGG + chr7_1:76904217-76904236 None:intergenic 50.0%
CGCTGTTTAACATCGGAACC+AGG + chr7_1:76904224-76904243 None:intergenic 50.0%
CATGGTCGTTAGGGGAGATG+AGG - chr7_1:76899509-76899528 Msa1039680:intron 55.0%
GACAGAACTGCGCAGTACGA+AGG - chr7_1:76899547-76899566 Msa1039680:intron 55.0%
CCTCGAAGCATGGCTAAGTG+CGG - chr7_1:76899573-76899592 Msa1039680:intron 55.0%
GTTGTTGCGTTGGATGGGAG+CGG - chr7_1:76899868-76899887 Msa1039680:intron 55.0%
CTGGGAAGGGTTTCATTGCG+AGG - chr7_1:76900268-76900287 Msa1039680:CDS 55.0%
ATTCCGGAACACTGCTGGAC+CGG - chr7_1:76900299-76900318 Msa1039680:CDS 55.0%
TTACCGGTCCAGCAGTGTTC+CGG + chr7_1:76900305-76900324 None:intergenic 55.0%
ACCGGTAAACCATCAAGCCG+TGG - chr7_1:76900317-76900336 Msa1039680:CDS 55.0%
! GCCACGGCTTGATGGTTTAC+CGG + chr7_1:76900321-76900340 None:intergenic 55.0%
GTATGGTTCAACCTCGAGGG+TGG - chr7_1:76900691-76900710 Msa1039680:CDS 55.0%
TCTACCAGCGAGCGATGAAC+CGG + chr7_1:76900781-76900800 None:intergenic 55.0%
CGCTCGCTGGTAGAGTCAAA+TGG - chr7_1:76900787-76900806 Msa1039680:CDS 55.0%
GCTGGTAGAGTCAAATGGCC+TGG - chr7_1:76900792-76900811 Msa1039680:CDS 55.0%
GTTCAGCGGTTCCTTAACGG+CGG - chr7_1:76900858-76900877 Msa1039680:intron 55.0%
GGTTCCTTAACGGCGGTTCA+TGG - chr7_1:76900865-76900884 Msa1039680:CDS 55.0%
GCAACCATGAACCGCCGTTA+AGG + chr7_1:76900872-76900891 None:intergenic 55.0%
GTCGCCGTCACAGTTAACGT+AGG - chr7_1:76902328-76902347 Msa1039680:intron 55.0%
AACTCGTGAGGACTCTGTCG+AGG + chr7_1:76902708-76902727 None:intergenic 55.0%
ATGCCATGGCAAACACCAGC+AGG - chr7_1:76904149-76904168 Msa1039680:intron 55.0%
!! GGAGGAGTTTTAGTCGCTCC+TGG + chr7_1:76904359-76904378 None:intergenic 55.0%
TGGACTTGGAGGGCCTGTTC+TGG + chr7_1:76899332-76899351 None:intergenic 60.0%
GTACTGCGCAGTTCTGTCGC+CGG + chr7_1:76899545-76899564 None:intergenic 60.0%
CCGCACTTAGCCATGCTTCG+AGG + chr7_1:76899576-76899595 None:intergenic 60.0%
CACGCAATGCCACGGCTTGA+TGG + chr7_1:76900329-76900348 None:intergenic 60.0%
AACCTCGAGGGTGGCTTGAG+TGG - chr7_1:76900700-76900719 Msa1039680:CDS 60.0%
CTACCAGCGAGCGATGAACC+GGG + chr7_1:76900780-76900799 None:intergenic 60.0%
GCACGGTCATCAACCCACTC+AGG + chr7_1:76902988-76903007 None:intergenic 60.0%
!! GAGTGGGTTGATGACCGTGC+TGG - chr7_1:76902988-76903007 Msa1039680:intron 60.0%
AGCCACTCAAGCCACCCTCG+AGG + chr7_1:76900705-76900724 None:intergenic 65.0%
CGAGGGTGGCTTGAGTGGCT+CGG - chr7_1:76900705-76900724 Msa1039680:CDS 65.0%
CTGGGGGAGGAGACTCCAAG+AGG - chr7_1:76902251-76902270 Msa1039680:intron 65.0%
GGACCCGGTTCATCGCTCGC+TGG - chr7_1:76900774-76900793 Msa1039680:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 76899145 76904397 76899145 ID=Msa1039680;Name=Msa1039680
chr7_1 mRNA 76899145 76904397 76899145 ID=Msa1039680-mRNA-1;Parent=Msa1039680;Name=Msa1039680-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|0|0|10|0|722
chr7_1 exon 76904196 76904397 76904196 ID=Msa1039680-mRNA-1:exon:20112;Parent=Msa1039680-mRNA-1
chr7_1 exon 76903916 76904141 76903916 ID=Msa1039680-mRNA-1:exon:20111;Parent=Msa1039680-mRNA-1
chr7_1 exon 76903692 76903897 76903692 ID=Msa1039680-mRNA-1:exon:20110;Parent=Msa1039680-mRNA-1
chr7_1 exon 76903434 76903679 76903434 ID=Msa1039680-mRNA-1:exon:20109;Parent=Msa1039680-mRNA-1
chr7_1 exon 76901128 76901282 76901128 ID=Msa1039680-mRNA-1:exon:20108;Parent=Msa1039680-mRNA-1
chr7_1 exon 76900862 76901082 76900862 ID=Msa1039680-mRNA-1:exon:20107;Parent=Msa1039680-mRNA-1
chr7_1 exon 76900608 76900855 76900608 ID=Msa1039680-mRNA-1:exon:20106;Parent=Msa1039680-mRNA-1
chr7_1 exon 76900377 76900580 76900377 ID=Msa1039680-mRNA-1:exon:20105;Parent=Msa1039680-mRNA-1
chr7_1 exon 76900239 76900364 76900239 ID=Msa1039680-mRNA-1:exon:20104;Parent=Msa1039680-mRNA-1
chr7_1 exon 76899145 76899479 76899145 ID=Msa1039680-mRNA-1:exon:20103;Parent=Msa1039680-mRNA-1
chr7_1 CDS 76904196 76904397 76904196 ID=Msa1039680-mRNA-1:cds;Parent=Msa1039680-mRNA-1
chr7_1 CDS 76903916 76904141 76903916 ID=Msa1039680-mRNA-1:cds;Parent=Msa1039680-mRNA-1
chr7_1 CDS 76903692 76903897 76903692 ID=Msa1039680-mRNA-1:cds;Parent=Msa1039680-mRNA-1
chr7_1 CDS 76903434 76903679 76903434 ID=Msa1039680-mRNA-1:cds;Parent=Msa1039680-mRNA-1
chr7_1 CDS 76901128 76901282 76901128 ID=Msa1039680-mRNA-1:cds;Parent=Msa1039680-mRNA-1
chr7_1 CDS 76900862 76901082 76900862 ID=Msa1039680-mRNA-1:cds;Parent=Msa1039680-mRNA-1
chr7_1 CDS 76900608 76900855 76900608 ID=Msa1039680-mRNA-1:cds;Parent=Msa1039680-mRNA-1
chr7_1 CDS 76900377 76900580 76900377 ID=Msa1039680-mRNA-1:cds;Parent=Msa1039680-mRNA-1
chr7_1 CDS 76900239 76900364 76900239 ID=Msa1039680-mRNA-1:cds;Parent=Msa1039680-mRNA-1
chr7_1 CDS 76899145 76899479 76899145 ID=Msa1039680-mRNA-1:cds;Parent=Msa1039680-mRNA-1
Gene Sequence

>Msa1039680

ATGGCCTTGCTTGTGAATTTCCTTTTCATTCTTATCCTTTTACCATCATTTGATCAAGTTCTCTCATTCCCAGATGAAATTCCCTCAGACATCCAAACTCAAGATATGCAAGCTTTGATTGCACAAGCTTGCATGGATATTGAAAACCAAAACTCATGCCTCACAAACATTCATAACGAGCTAACCAGAACAGGCCCTCCAAGTGCCATCAACAACATGACAAAGATCAGTACATTCTCTGTTAATAACCGCGAGCAACTTGCCATAGAAGATTGCAAGGAGCTCCTTGATTTCTCTGTGTCAGAGCTTGCATGGTCGTTAGGGGAGATGAGGAGAATTCGAGCCGGCGACAGAACTGCGCAGTACGAAGGAAACCTCGAAGCATGGCTAAGTGCGGCGCTTAGCAACCAAGACACATGTATTGAAGGACGTCTTGAGAGTTACATTAGTGGAAGCTTAACACAAGTAACCCAGCTTATCAGTAATGTTCTGTCTTTGTACACTCAGCTTAATCGCTTACCCTTTAGGTCTCCAAGGAACACTACCTTGCATGAAACTAGTACTGATGAAAGTTTGGAGTTTCCTGAATGGATGACAGAGGCTGATCAAGAGCTACTTAAATCTAAGCCGCACGATGCAGTTGTTGCGTTGGATGGGAGCGGTCAGTACCGTACAATCAACGAAGCTGTTAATGCAGCTCCTAGTCATAGCAATAGGAGACATGTTATCTATGTGAAGAAGGGACTATACAAGGAGAATATTGATATGAAGAAGAAGATGACCAACATCATGATCGTTGGTGATGGTATTGGTCAAACCATTGTTACAAGCAATCGCAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACGTTTGGAGACTCCAAGAGGAATAAGAGACTCGCCATAATTGGTGTCTCTACCTTCTTATTAGTTGCTATGGTTGTCGCCGTCACAGTTAACGTAGGCTTTAACAACAAAAAGGAACCTGGAGAAGATCAAACTTCAAAAGAGTCACGCGTATCTCAATCGGAATGTGAGGACAGTCTCATAGCACATGCTGGCAATATAACTGAACCAAAAGAACTCATCAAGATCGCTTTCAACATAACCATCGCAAAAATCAGCGAAGGACTTAAAAAAACTCATCTCCTTCAAGAGGCTGAAAAAGATGAAAGAACTAAACAAGCACTTGATACGTGTAAACAAGTCATGCAGCTTTCCATTGACGAATTCCAAAGGTCACTAGAAAGTAACTTCGACCTTAATAGCCTCGACAGAGTCCTCACGAGTTTGAAAGTATGGTTAAGCGGTGCCATCACATACCAAGAAACATGTTTGGATGCTTTTGAGAATACTACAACCGATGCTGGTCATAAAATGCAAGAGGTTTTGCAAGCTTCTATGCATATGAGTAGCAATGGTCTTTCCATTATTAACCAACTTTCCAAAACATTCGAAGAGATGAAACAACCTGCTGGTCGTCGTCTTTTGAAGGAAAGTCATGGTGGTGATTTTGAGCTTCCTGAGTGGGTTGATGACCGTGCTGGTGTTAGGAAACTTCTTAATAAAATGACTGGCAGGAAACTTCAGGCTCATGTTGTTGTTGCTAAGGATGGAAGTGGAAATTTCACCACAATCACTGAGGCTCTTAAGCATGTTCCCAAGAAAAACTTGAAGCCATTTGTTATTTACATCAAGGAGGAGTATGTTGAGGTTACTAAAACCATGACTCACGTTGTTTTCATCGGTGATGGTGGTAGAAAGACACGCATTACTGGCAATAAAAACTTCATTGATGGAGTTGGTACCTTCAAAACCGCTACCGTTGCTTACTTGGCTCGTCCATGGAAGGATTTCTCAAGAACTATCTTTTTGGATACATATATTGGTGATTTGATCACACCTGAAGGTTATATGCCATGGCAAACACCAGCAGGTATCACAGGAACTGACACTTGTTACTATGCTGAGTACAATAACCGTGGTCCTGGTTCCGATGTTAAACAGCGTGTAAAATGGCAAGGTGTTAAGACTATTACTTCAGAAGGAGCAGCTAGTTTTGTGCCAATTAGGTTCTTCCATGGAGATGATTGGATTAGGGTAACTAGAGTTCCTTATTCTCCAGGAGCGACTAAAACTCCTCCTTCAAGACCAACTCATTGA
Protein sequence

>Msa1039680

MALLVNFLFILILLPSFDQVLSFPDEIPSDIQTQDMQALIAQACMDIENQNSCLTNIHNELTRTGPPSAINNMTKISTFSVNNREQLAIEDCKELLDFSVSELAWSLGEMRRIRAGDRTAQYEGNLEAWLSAALSNQDTCIEGRLESYISGSLTQVTQLISNVLSLYTQLNRLPFRSPRNTTLHETSTDESLEFPEWMTEADQELLKSKPHDAVVALDGSGQYRTINEAVNAAPSHSNRRHVIYVKKGLYKENIDMKKKMTNIMIVGDGIGQTIVTSNRNFMQGWTTFRTATFGDSKRNKRLAIIGVSTFLLVAMVVAVTVNVGFNNKKEPGEDQTSKESRVSQSECEDSLIAHAGNITEPKELIKIAFNITIAKISEGLKKTHLLQEAEKDERTKQALDTCKQVMQLSIDEFQRSLESNFDLNSLDRVLTSLKVWLSGAITYQETCLDAFENTTTDAGHKMQEVLQASMHMSSNGLSIINQLSKTFEEMKQPAGRRLLKESHGGDFELPEWVDDRAGVRKLLNKMTGRKLQAHVVVAKDGSGNFTTITEALKHVPKKNLKPFVIYIKEEYVEVTKTMTHVVFIGDGGRKTRITGNKNFIDGVGTFKTATVAYLARPWKDFSRTIFLDTYIGDLITPEGYMPWQTPAGITGTDTCYYAEYNNRGPGSDVKQRVKWQGVKTITSEGAASFVPIRFFHGDDWIRVTRVPYSPGATKTPPSRPTH*