AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1047380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1047380 MtrunA17_Chr7g0215341 91.851 859 38 4 1 859 1 827 0.0 1570
Msa1047380 MtrunA17_Chr6g0484831 87.587 862 77 4 1 859 1 835 0.0 1523
Msa1047380 MtrunA17_Chr5g0406641 88.515 862 68 5 1 858 1 835 0.0 1503
Msa1047380 MtrunA17_Chr4g0007641 77.153 871 159 8 1 859 1 843 0.0 1343
Msa1047380 MtrunA17_Chr6g0464681 66.480 895 195 11 1 859 1 826 0.0 1156
Msa1047380 MtrunA17_Chr6g0486931 53.722 806 320 13 57 843 146 917 0.0 851
Msa1047380 MtrunA17_Chr8g0369361 49.688 801 353 14 57 842 9 774 0.0 766
Msa1047380 MtrunA17_Chr5g0427891 55.135 370 138 4 474 843 1 342 2.93e-131 397
Msa1047380 MtrunA17_Chr2g0302601 31.234 397 214 9 434 826 1215 1556 1.40e-50 193
Msa1047380 MtrunA17_Chr6g0477371 31.234 397 214 9 434 826 1206 1547 2.49e-49 189
Msa1047380 MtrunA17_Chr4g0017221 30.982 397 215 9 434 826 1190 1531 1.30e-48 187
Msa1047380 MtrunA17_Chr8g0364091 44.068 177 87 6 125 290 37 212 6.88e-37 139
Msa1047380 MtrunA17_Chr8g0364111 77.273 66 15 0 777 842 3 68 6.87e-29 110
Msa1047380 MtrunA17_Chr5g0427881 58.462 65 27 0 385 449 39 103 6.79e-22 91.3
Msa1047380 MtrunA17_Chr5g0427871 40.299 134 64 3 34 151 8 141 8.50e-22 92.4
Msa1047380 MtrunA17_Chr3g0087051 46.988 83 42 1 746 826 68 150 6.91e-18 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1047380 AT1G80740.1 49.639 832 342 12 42 846 4 785 0.0 795
Msa1047380 AT1G69770.1 49.595 865 369 15 1 839 1 824 0.0 790
Msa1047380 AT4G19020.1 49.250 800 351 10 57 842 523 1281 0.0 771
Msa1047380 AT4G19020.2 49.250 800 351 10 57 842 475 1233 0.0 771
Msa1047380 AT4G14140.3 33.750 400 200 11 434 826 1168 1509 2.72e-53 202
Msa1047380 AT4G14140.1 33.750 400 200 11 434 826 1168 1509 2.72e-53 202
Msa1047380 AT4G14140.2 33.750 400 200 11 434 826 1194 1535 3.37e-53 202
Msa1047380 AT4G08990.1 33.250 400 202 10 434 826 1161 1502 2.43e-51 196
Msa1047380 AT4G13610.1 32.170 401 193 12 434 826 1070 1399 5.87e-49 189
Msa1047380 AT5G49160.2 30.905 398 214 9 434 826 1095 1436 1.42e-46 181
Msa1047380 AT5G49160.1 31.000 400 211 10 434 826 1183 1524 1.70e-46 181

Find 206 sgRNAs with CRISPR-Local

Find 403 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATTTGCTGGTGGGTTTC+TGG 0.008640 7_2:-8267938 Msa1047380:CDS
ACTTTACTGGATTTGTATTC+TGG 0.102309 7_2:-8269184 Msa1047380:CDS
CCAAAACGTACGTGAGTTTC+TGG 0.160369 7_2:+8268945 None:intergenic
TTCTAGGCCCTGAATATTAT+TGG 0.195110 7_2:+8265205 None:intergenic
TGAAGTCTCACTTTCTATTT+TGG 0.212259 7_2:+8269306 None:intergenic
TCAACACTTTCAAATGAATC+TGG 0.268377 7_2:-8269286 Msa1047380:CDS
ACATTCATTTATACAATTCT+AGG 0.285423 7_2:+8265189 None:intergenic
TAGACAACTTGGGTACTTAA+AGG 0.288833 7_2:+8265331 None:intergenic
TGTGAGAAGTTTGTACTAAA+TGG 0.291004 7_2:-8268763 Msa1047380:CDS
ACATTAGGTTTGGCAATTCT+AGG 0.297456 7_2:-8265386 Msa1047380:CDS
GTTGAACCGCTCAGTGTAAA+TGG 0.300679 7_2:+8271389 None:intergenic
TAGGCCTGAGTGGACTTTAC+TGG 0.302719 7_2:-8269197 Msa1047380:CDS
CTGATGATTATGCAAGATTC+TGG 0.311181 7_2:-8265158 Msa1047380:three_prime_UTR
GATTCTGGAAACATAAAATA+TGG 0.313320 7_2:-8265143 Msa1047380:three_prime_UTR
CTTGCCCTTGGATACACATT+AGG 0.317533 7_2:-8265401 Msa1047380:CDS
TTCGATTTCTTTCTTCTAGA+AGG 0.320245 7_2:+8271089 None:intergenic
TTCTTCAACCGGAGATTGTT+TGG 0.326628 7_2:+8271130 None:intergenic
AAATTTGCTGGTGGGTTTCT+GGG 0.327523 7_2:-8267937 Msa1047380:CDS
CCAGACTGCTATAAGCTTTG+TGG 0.329709 7_2:-8265979 Msa1047380:CDS
CATAATATCAATTCAAGATA+TGG 0.331571 7_2:+8266780 None:intergenic
AACATTTGAGAAAGTTATAT+AGG 0.344153 7_2:+8269443 None:intergenic
CATCCGAGCTTGATAATTCA+TGG 0.344162 7_2:+8267888 None:intergenic
ATCCTTTAGATTGTTTAGTT+AGG 0.347736 7_2:-8269650 Msa1047380:CDS
CATATGGCCTTCCTCAATTT+CGG 0.349601 7_2:-8267846 Msa1047380:CDS
CCACCTTGTCAAGGTGTTAG+TGG 0.350266 7_2:-8268090 Msa1047380:CDS
ATGTCCACTGGTCTTTGCTT+TGG 0.352341 7_2:-8269151 Msa1047380:CDS
AGATATGGAACCTTCTCCTT+TGG 0.356040 7_2:+8266795 None:intergenic
CTTTACTGGATTTGTATTCT+GGG 0.362248 7_2:-8269183 Msa1047380:CDS
TTAGTGGTTTCAATCGCTTC+AGG 0.364770 7_2:-8268074 Msa1047380:CDS
GTCAAATTAAAGAATGTAAT+AGG 0.367477 7_2:-8269216 Msa1047380:CDS
GGGCTCCCATGTATCATAAC+TGG 0.370498 7_2:+8268457 None:intergenic
TATCCAAGGGCAAGGGCAAC+AGG 0.371847 7_2:+8265410 None:intergenic
AGGAACGACTTCGTCTTGTT+TGG 0.374277 7_2:+8271175 None:intergenic
GAAACATAAAATATGGCAAA+TGG 0.375563 7_2:-8265136 Msa1047380:three_prime_UTR
GTTCCTGTTGCCCTTGCCCT+TGG 0.380094 7_2:-8265413 Msa1047380:CDS
TTCAATCTTTACCGTGTCTT+CGG 0.381407 7_2:+8269824 None:intergenic
ACCTGACTCTGAGGTATTTG+AGG 0.384130 7_2:-8268662 Msa1047380:CDS
AACACATACCTCTGTTTGAC+AGG 0.386966 7_2:+8265955 None:intergenic
GTAAAATATTGTTCTTCATC+AGG 0.390612 7_2:+8269867 None:intergenic
AAAAGAGTGTATCTAAAATC+TGG 0.397497 7_2:-8266629 Msa1047380:CDS
ACAAATGTCATAGCATAATC+TGG 0.400607 7_2:+8266512 None:intergenic
TCCAGAGATGGTGAATTATT+CGG 0.404648 7_2:-8266907 Msa1047380:intron
AGACAACTTGGGTACTTAAA+GGG 0.412259 7_2:+8265332 None:intergenic
TTGTTTGGCTTTCTTCCGTT+TGG 0.415225 7_2:+8271145 None:intergenic
CCTTGGATACACATTAGGTT+TGG 0.421810 7_2:-8265396 Msa1047380:CDS
TGGCCAAGGCATTATACCTT+GGG 0.423475 7_2:-8267464 Msa1047380:CDS
ACATTTGAGAAAGTTATATA+GGG 0.426320 7_2:+8269444 None:intergenic
GCTGAATACAACAGGCCATT+TGG 0.427862 7_2:-8266394 Msa1047380:CDS
ATGATGGCTGCAGGGTCATA+TGG 0.428980 7_2:-8267862 Msa1047380:CDS
TTCCTAACTAAACAATCTAA+AGG 0.433146 7_2:+8269648 None:intergenic
TATCGTGAAGCGAAGGTTGA+TGG 0.441672 7_2:-8270770 Msa1047380:CDS
CTTCGTCGGAGAACTTATTC+CGG 0.444090 7_2:-8271036 Msa1047380:CDS
ATGAGTTGGTAACGGATATG+AGG 0.447163 7_2:+8267674 None:intergenic
TAAAGAAAACAAGGTGGAAT+GGG 0.451055 7_2:-8266663 Msa1047380:CDS
GAAACCAGTTCTTCTTCAAC+CGG 0.452190 7_2:+8271119 None:intergenic
CTAAGAACTCTGTCTTGGTC+TGG 0.452322 7_2:+8266033 None:intergenic
CTGGATTTGTATTCTGGGTG+TGG 0.458568 7_2:-8269178 Msa1047380:CDS
CTGATGAAGCACAAAAGAAA+TGG 0.459268 7_2:-8271013 Msa1047380:CDS
CTTGCATAATCATCAGTTGT+AGG 0.460358 7_2:+8265165 None:intergenic
TTTCTTACTTCAAACTCAGT+AGG 0.462655 7_2:+8267627 None:intergenic
ATCTCCGGTTGAAGAAGAAC+TGG 0.462907 7_2:-8271123 Msa1047380:CDS
ATGTATCTGCTGAATACAAC+AGG 0.465376 7_2:-8266402 Msa1047380:CDS
CTCAGTAGGGATGACTGATC+TGG 0.468959 7_2:+8267641 None:intergenic
CAACACTTTCAAATGAATCT+GGG 0.470283 7_2:-8269285 Msa1047380:CDS
CGAATAACAACCTGGTTATG+AGG 0.471305 7_2:+8266322 None:intergenic
ATGCTATGACATTTGTTCAC+GGG 0.472626 7_2:-8266505 Msa1047380:CDS
TTTCTGGGGCGTTATGCTGT+AGG 0.473896 7_2:-8267922 Msa1047380:CDS
CGGATGGGAATGATGGCTGC+AGG 0.474115 7_2:-8267871 Msa1047380:CDS
AAAGGACGGGCTAGACAACT+TGG 0.474566 7_2:+8265320 None:intergenic
ACAGGCCATTTGGTCGACTT+TGG 0.475021 7_2:-8266384 Msa1047380:CDS
AATATACCTCAAGCCCTCAA+TGG 0.475252 7_2:+8268436 None:intergenic
ACCTCAAATACCTCAGAGTC+AGG 0.475532 7_2:+8268661 None:intergenic
TTCGGCTCTGTAAAACCATT+GGG 0.476357 7_2:+8269842 None:intergenic
CCACAAAGCTTATAGCAGTC+TGG 0.481850 7_2:+8265979 None:intergenic
ACGATTCCAGTTATGATACA+TGG 0.482110 7_2:-8268463 Msa1047380:CDS
TGTGTGTGTGCAGGTGATTA+AGG 0.483671 7_2:-8269730 Msa1047380:intron
AAACATAAAATATGGCAAAT+GGG 0.485354 7_2:-8265135 Msa1047380:three_prime_UTR
GCCATTTGGTCGACTTTGGT+GGG 0.487889 7_2:-8266380 Msa1047380:CDS
CGAGAGAATGCAAGGCTACA+AGG 0.488910 7_2:-8266006 Msa1047380:CDS
TTTATCAGCTGCATGGACAT+TGG 0.493693 7_2:+8269261 None:intergenic
TTCTTACTTCAAACTCAGTA+GGG 0.495616 7_2:+8267628 None:intergenic
ATATACCTCAAGCCCTCAAT+GGG 0.497888 7_2:+8268437 None:intergenic
CTTCGGCTCTGTAAAACCAT+TGG 0.499873 7_2:+8269841 None:intergenic
TCATCATCAACTACATCTAA+AGG 0.502737 7_2:+8265302 None:intergenic
GGCCATTTGGTCGACTTTGG+TGG 0.503320 7_2:-8266381 Msa1047380:CDS
GATACATGGGAGCCCATTGA+GGG 0.504051 7_2:-8268449 Msa1047380:CDS
TGCATATTCATTTATATCCA+CGG 0.506267 7_2:+8268992 None:intergenic
CACAAAAGAAATGGCCTCAC+CGG 0.507084 7_2:-8271004 Msa1047380:CDS
GAACTCTGTCTTGGTCTGGA+TGG 0.507573 7_2:+8266037 None:intergenic
AAAGAAATCGAAGCAATCTT+CGG 0.508099 7_2:-8271078 Msa1047380:CDS
GGGTGTGGAGCTATGTCCAC+TGG 0.509075 7_2:-8269163 Msa1047380:CDS
TCATCGGTGTTTAATTTCAA+AGG 0.509674 7_2:+8266840 None:intergenic
TCAGCAACTAATTGTTTACA+TGG 0.512928 7_2:-8268019 Msa1047380:CDS
CACCACAAATAAAATCAGCT+TGG 0.514779 7_2:+8268115 None:intergenic
TTAAAGAAAACAAGGTGGAA+TGG 0.515036 7_2:-8266664 Msa1047380:CDS
TCCGACGATGCATGCTTCGT+CGG 0.515548 7_2:-8271050 Msa1047380:CDS
TTAGATGTAGTTGATGATGA+TGG 0.517459 7_2:-8265299 Msa1047380:CDS
GTCCCCAAGGTATAATGCCT+TGG 0.517822 7_2:+8267461 None:intergenic
ATCTTTCAGGTGCAATGGAA+GGG 0.518544 7_2:-8268488 Msa1047380:intron
AAGAAGATGAATAGTGAAAG+CGG 0.518886 7_2:+8271277 None:intergenic
TCAAGCTCGGATGGGAATGA+TGG 0.519547 7_2:-8267878 Msa1047380:CDS
CTGGCCAAGGCATTATACCT+TGG 0.521309 7_2:-8267465 Msa1047380:CDS
CACTAATGAAAAGTGTCAGC+TGG 0.523124 7_2:-8267484 Msa1047380:CDS
AAAACACGCATCCGAAATTG+AGG 0.524141 7_2:+8267835 None:intergenic
CAAAACGTACGTGAGTTTCT+GGG 0.525514 7_2:+8268946 None:intergenic
TCGTTCCTCATTCTTCCAAA+CGG 0.526193 7_2:-8271160 Msa1047380:CDS
TTATAATCTTTCAGGTGCAA+TGG 0.528275 7_2:-8268493 Msa1047380:intron
GAAGCCTAAGTATGTTCTCA+TGG 0.528299 7_2:-8267980 Msa1047380:CDS
AACAACCTGGTTATGAGGCT+CGG 0.528328 7_2:+8266327 None:intergenic
AATCTTTCAGGTGCAATGGA+AGG 0.528541 7_2:-8268489 Msa1047380:intron
TCCCACCAAAGTCGACCAAA+TGG 0.528934 7_2:+8266379 None:intergenic
CATGAATTATCAAGCTCGGA+TGG 0.529786 7_2:-8267887 Msa1047380:CDS
GAAGAAAGCCAAACAATCTC+CGG 0.530553 7_2:-8271138 Msa1047380:CDS
GCGATTATTATAAATGAAGC+GGG 0.531041 7_2:+8271311 None:intergenic
TTCTTCCGTTTGGAAGAATG+AGG 0.531258 7_2:+8271155 None:intergenic
ACAGATTCTGATTTGAATGC+TGG 0.534166 7_2:-8268730 Msa1047380:CDS
ATCAACTACATCTAAAGGAC+GGG 0.535962 7_2:+8265307 None:intergenic
CCAAACCTAATGTGTATCCA+AGG 0.536081 7_2:+8265396 None:intergenic
GAGTGAGGATGAAAGTTTGA+AGG 0.536508 7_2:-8270804 Msa1047380:CDS
TTGCCACATTCCAAAGGAGA+AGG 0.538842 7_2:-8266805 Msa1047380:CDS
ATCGTGAAGCGAAGGTTGAT+GGG 0.542081 7_2:-8270769 Msa1047380:CDS
TATATCAGATTAAAGAGAAG+TGG 0.544554 7_2:-8267251 Msa1047380:intron
TTCTTGCATTAAGCTTGTCA+CGG 0.545328 7_2:-8269119 Msa1047380:intron
GAATGCTAAGAACTCTGTCT+TGG 0.555016 7_2:+8266028 None:intergenic
CTGGATTCAACCTCATGAGT+TGG 0.555366 7_2:+8267660 None:intergenic
GAACCTTCTCCTTTGGAATG+TGG 0.555858 7_2:+8266802 None:intergenic
GTGGTGAGACTTACAGGAAG+AGG 0.556985 7_2:+8268242 None:intergenic
AGCGATTATTATAAATGAAG+CGG 0.557507 7_2:+8271310 None:intergenic
ATGTGCAGGTACATGCAAGT+TGG 0.560046 7_2:-8265449 Msa1047380:intron
CTCACTCGTTCTTAGTGTAC+CGG 0.561833 7_2:+8270985 None:intergenic
CGTTGTCAAAGGACCGTCAT+CGG 0.561991 7_2:+8265358 None:intergenic
AGACTACTCTCTATTTGCTA+TGG 0.562696 7_2:-8268634 Msa1047380:CDS
TCTAAAATCTGGAAAGCCGT+TGG 0.563755 7_2:-8266618 Msa1047380:intron
AGCGATGATGAAAAGAGCTA+CGG 0.565697 7_2:-8267302 Msa1047380:CDS
AAGGGCCGAGCCTCATAACC+AGG 0.568054 7_2:-8266332 Msa1047380:intron
ATGAATTATCAAGCTCGGAT+GGG 0.571223 7_2:-8267886 Msa1047380:CDS
TGTGGTGGGCCACCTTGTCA+AGG 0.574035 7_2:-8268099 Msa1047380:CDS
TTGTGTCCACTGTTGTAACA+AGG 0.575348 7_2:-8266351 Msa1047380:CDS
TGAAAAGTGTCAGCTGGCCA+AGG 0.575456 7_2:-8267478 Msa1047380:CDS
AATTTGCTGGTGGGTTTCTG+GGG 0.576721 7_2:-8267936 Msa1047380:CDS
TTGAATGCTGGTGAAGAAGC+TGG 0.577481 7_2:-8268718 Msa1047380:CDS
TTCTCCATGAGAACATACTT+AGG 0.578027 7_2:+8267976 None:intergenic
CGCAATTGATGATCTCCCAC+CGG 0.580227 7_2:-8267439 Msa1047380:intron
GAAGAAGCTGGTGAAGAAGC+TGG 0.580453 7_2:-8268706 Msa1047380:CDS
CCTACTCTGAAATATAGTCC+TGG 0.581965 7_2:+8268589 None:intergenic
GGACTACATTGCTAAGATTG+TGG 0.583306 7_2:-8269904 Msa1047380:CDS
CTAATGTGTATCCAAGGGCA+AGG 0.584216 7_2:+8265402 None:intergenic
TGATACATGGGAGCCCATTG+AGG 0.584875 7_2:-8268450 Msa1047380:CDS
TGAAAAGACATGGATTAATG+AGG 0.588868 7_2:+8265260 None:intergenic
GACAACTTGGGTACTTAAAG+GGG 0.589664 7_2:+8265333 None:intergenic
TTAGCATTCGAGAGAATGCA+AGG 0.591436 7_2:-8266014 Msa1047380:CDS
GCGATGATGAAAAGAGCTAC+GGG 0.591951 7_2:-8267301 Msa1047380:CDS
CTGAGCGGTTCAACAAGTGC+GGG 0.592318 7_2:-8271380 Msa1047380:five_prime_UTR
GCAAACTCTCTCATAGTCAT+CGG 0.593163 7_2:+8266824 None:intergenic
TCCGACGAAGCATGCATCGT+CGG 0.593618 7_2:+8271049 None:intergenic
TTTAAGTCTACTGAAAGAGT+GGG 0.594108 7_2:-8268794 Msa1047380:CDS
TGACTTGAAGAGATGGGCCG+TGG 0.594840 7_2:-8269009 Msa1047380:intron
TGGCCATGAATTATCAAGCT+CGG 0.597417 7_2:-8267891 Msa1047380:CDS
CGATTCCAGTTATGATACAT+GGG 0.597731 7_2:-8268462 Msa1047380:CDS
GGGAGCCCATTGAGGGCTTG+AGG 0.601086 7_2:-8268442 Msa1047380:intron
GATAATTCATGGCCACTAGA+CGG 0.606811 7_2:+8267899 None:intergenic
ATTCTAGGACTCTCCGATGA+CGG 0.608856 7_2:-8265371 Msa1047380:CDS
TGCAGGTGATTAAGGACCAT+GGG 0.609611 7_2:-8269722 Msa1047380:intron
ATAATTCCATTTACACTGAG+CGG 0.609918 7_2:-8271395 None:intergenic
TTAAAGGGGAGCGTTGTCAA+AGG 0.611103 7_2:+8265347 None:intergenic
TGAGTTGGTAACGGATATGA+GGG 0.612406 7_2:+8267675 None:intergenic
TATGCTATGACATTTGTTCA+CGG 0.613180 7_2:-8266506 Msa1047380:CDS
GGCAAACTTCAGGGACCTCG+AGG 0.614201 7_2:-8266696 Msa1047380:CDS
GATCATCAATTGCGTCCCCA+AGG 0.614386 7_2:+8267448 None:intergenic
GTTTCACTATCGTGAAGCGA+AGG 0.614568 7_2:-8270777 Msa1047380:CDS
GAGAGTTTGCCACATTCCAA+AGG 0.615917 7_2:-8266811 Msa1047380:CDS
AGATAACAGTTGAAAAGACA+TGG 0.616171 7_2:+8265250 None:intergenic
CATCAACTACATCTAAAGGA+CGG 0.616327 7_2:+8265306 None:intergenic
AATTCAGGTGAGGAATGAGC+CGG 0.616828 7_2:-8268827 Msa1047380:intron
ACTTTCTCAAATGTTGACAA+TGG 0.620113 7_2:-8269435 Msa1047380:intron
TCAACCTCATGAGTTGGTAA+CGG 0.622459 7_2:+8267666 None:intergenic
TTATGCTGTAGGCCGTCTAG+TGG 0.625272 7_2:-8267911 Msa1047380:CDS
TGATCATACAGCATACCACT+TGG 0.627170 7_2:+8266867 None:intergenic
CACGCATCCGAAATTGAGGA+AGG 0.629581 7_2:+8267839 None:intergenic
GCAAACTTCAGGGACCTCGA+GGG 0.637506 7_2:-8266695 Msa1047380:CDS
CAAACCTAATGTGTATCCAA+GGG 0.638670 7_2:+8265397 None:intergenic
GGATGGGAATGATGGCTGCA+GGG 0.639348 7_2:-8267870 Msa1047380:CDS
TAATGTGTATCCAAGGGCAA+GGG 0.640727 7_2:+8265403 None:intergenic
AAGAATGTAATAGGCCTGAG+TGG 0.644520 7_2:-8269207 Msa1047380:CDS
TGCTCCAAAGCAAAGACCAG+TGG 0.647355 7_2:+8269147 None:intergenic
AAATCCAGTAAAGTCCACTC+AGG 0.651482 7_2:+8269193 None:intergenic
AGATGATTCACCTGACTCTG+AGG 0.655360 7_2:-8268671 Msa1047380:CDS
TGTGTCCACTGTTGTAACAA+GGG 0.656136 7_2:-8266350 Msa1047380:CDS
ACACATACCTCTGTTTGACA+GGG 0.662004 7_2:+8265956 None:intergenic
ACTGAGCGGTTCAACAAGTG+CGG 0.664773 7_2:-8271381 Msa1047380:five_prime_UTR
AAGGACGGGCTAGACAACTT+GGG 0.665885 7_2:+8265321 None:intergenic
ATATCCGTTACCAACTCATG+AGG 0.669953 7_2:-8267670 Msa1047380:CDS
ATGTCAAAATAGAATTCACA+AGG 0.670234 7_2:+8269480 None:intergenic
CTCGGCCCTTGTTACAACAG+TGG 0.671085 7_2:+8266345 None:intergenic
GTGCAGGTGATTAAGGACCA+TGG 0.674534 7_2:-8269723 Msa1047380:intron
GGCCAAGGCATTATACCTTG+GGG 0.678055 7_2:-8267463 Msa1047380:CDS
CATATATACATACTTAGAGG+AGG 0.681619 7_2:+8266481 None:intergenic
CCACTAACACCTTGACAAGG+TGG 0.683957 7_2:+8268090 None:intergenic
GACTCTCAAAGTGCACCAAG+TGG 0.685496 7_2:-8266882 Msa1047380:CDS
TTTGTGGCCCTGTCAAACAG+AGG 0.688111 7_2:-8265963 Msa1047380:intron
TCAAAATAGAATTCACAAGG+AGG 0.689598 7_2:+8269483 None:intergenic
TGTGCTAGTTAAAGAAAACA+AGG 0.696627 7_2:-8266672 Msa1047380:CDS
CTTTAACTAGCACACCCTCG+AGG 0.704914 7_2:+8266681 None:intergenic
GCTAGTTAAAGAAAACAAGG+TGG 0.715923 7_2:-8266669 Msa1047380:CDS
TCGTTCTTAGTGTACCGGTG+AGG 0.720228 7_2:+8270990 None:intergenic
AAACCACTAACACCTTGACA+AGG 0.729461 7_2:+8268087 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAATCATATATAAAATAA+CGG + chr7_2:8266322-8266341 None:intergenic 10.0%
!!! TTTATTTCATGTTGAAATTT+TGG - chr7_2:8265792-8265811 Msa1047380:intron 15.0%
!!! TGTTGAAAATTTTGTTTTTT+AGG - chr7_2:8265883-8265902 Msa1047380:intron 15.0%
!!! GTTGAAAATTTTGTTTTTTA+GGG - chr7_2:8265884-8265903 Msa1047380:intron 15.0%
!!! TGTTGTAAATTTTGTTTTTT+AGG - chr7_2:8265921-8265940 Msa1047380:intron 15.0%
!!! GTTGTAAATTTTGTTTTTTA+GGG - chr7_2:8265922-8265941 Msa1047380:intron 15.0%
!!! TTTTTTTTTTATGTTGATTG+TGG - chr7_2:8267097-8267116 Msa1047380:intron 15.0%
!! CTATAAATTTATAATCTTTC+AGG - chr7_2:8267947-8267966 Msa1047380:CDS 15.0%
!!! ATGAAAGATTTTGTTATAAA+TGG - chr7_2:8268164-8268183 Msa1047380:intron 15.0%
!!! TTTTGTTATAAATGGATATA+AGG - chr7_2:8268172-8268191 Msa1047380:intron 15.0%
!!! TTACTCTAAATGTTTTAAAA+TGG - chr7_2:8268710-8268729 Msa1047380:CDS 15.0%
!! CATATATTTCAATTTCAAAA+TGG + chr7_2:8270696-8270715 None:intergenic 15.0%
!! ATATAGAAGTTAGTTATAAT+AGG + chr7_2:8270752-8270771 None:intergenic 15.0%
!!! AAAAAAAAGTATGAAATCCA+AGG - chr7_2:8266232-8266251 Msa1047380:intron 20.0%
!!! TTTATGGTTATTGTTGATTT+TGG - chr7_2:8266686-8266705 Msa1047380:CDS 20.0%
!!! ATGTTGATTTTATATACTAC+AGG - chr7_2:8266922-8266941 Msa1047380:intron 20.0%
!! ACATTTGAGAAAGTTATATA+GGG + chr7_2:8267007-8267026 None:intergenic 20.0%
!! AACATTTGAGAAAGTTATAT+AGG + chr7_2:8267008-8267027 None:intergenic 20.0%
!! GTCAAATTAAAGAATGTAAT+AGG - chr7_2:8267232-8267251 Msa1047380:intron 20.0%
!!! TAATTTGCATAATGTTTCTT+TGG - chr7_2:8267361-8267380 Msa1047380:intron 20.0%
!! TTGCATAAGATAAAGTTATA+AGG + chr7_2:8267893-8267912 None:intergenic 20.0%
!!! ATAATCAATATCTTGATGAT+TGG + chr7_2:8268038-8268057 None:intergenic 20.0%
!!! TTAAGATTTGCTGTTAATTA+AGG - chr7_2:8268076-8268095 Msa1047380:CDS 20.0%
!!! TCTAAATGTTTTAAAATGGA+AGG - chr7_2:8268714-8268733 Msa1047380:CDS 20.0%
!!! TTTGAGTTTTGAATTATTCT+TGG - chr7_2:8269235-8269254 Msa1047380:CDS 20.0%
!! TATAATTAGAATTGTGTATG+TGG - chr7_2:8269426-8269445 Msa1047380:intron 20.0%
!! CATAATATCAATTCAAGATA+TGG + chr7_2:8269671-8269690 None:intergenic 20.0%
!!! TTTTAAAGAGGTTTTACAAT+GGG + chr7_2:8270201-8270220 None:intergenic 20.0%
!!! AATACAACATTGTTTTAAAG+AGG + chr7_2:8270213-8270232 None:intergenic 20.0%
!! ATTTCAATTTCAAAATGGAA+GGG + chr7_2:8270691-8270710 None:intergenic 20.0%
!! TATTTCAATTTCAAAATGGA+AGG + chr7_2:8270692-8270711 None:intergenic 20.0%
!!! ATAATAGGTTTATCAGTTTT+TGG + chr7_2:8270737-8270756 None:intergenic 20.0%
!! TTAGGTGTAATATTTCTTAT+TGG - chr7_2:8270832-8270851 Msa1047380:intron 20.0%
!! TTCCATTATTATGTATATCA+TGG - chr7_2:8270955-8270974 Msa1047380:intron 20.0%
!!! TTTTTAAGCCAATAATATTC+AGG - chr7_2:8271235-8271254 Msa1047380:five_prime_UTR 20.0%
!!! TTTTAAGCCAATAATATTCA+GGG - chr7_2:8271236-8271255 Msa1047380:five_prime_UTR 20.0%
!! ACATTCATTTATACAATTCT+AGG + chr7_2:8271262-8271281 None:intergenic 20.0%
!! AAACATAAAATATGGCAAAT+GGG - chr7_2:8271313-8271332 Msa1047380:five_prime_UTR 20.0%
! AGCGATTATTATAAATGAAG+CGG + chr7_2:8265141-8265160 None:intergenic 25.0%
!!! TGTTGAAATTTTGGTGTTTT+AGG - chr7_2:8265801-8265820 Msa1047380:intron 25.0%
!!! GTTGAAATTTTGGTGTTTTA+GGG - chr7_2:8265802-8265821 Msa1047380:intron 25.0%
!! GCTTAAAATTGTGTGTTTTA+TGG - chr7_2:8265993-8266012 Msa1047380:CDS 25.0%
!! TTCATTTCTTTGATTTCTTG+TGG - chr7_2:8266016-8266035 Msa1047380:CDS 25.0%
! TTGATTTCTTGTGGAAAATT+TGG - chr7_2:8266025-8266044 Msa1047380:CDS 25.0%
!! CATGTTGAAAAATGTGTTTT+AGG - chr7_2:8266340-8266359 Msa1047380:CDS 25.0%
! GTAAAATATTGTTCTTCATC+AGG + chr7_2:8266584-8266603 None:intergenic 25.0%
! ATCCTTTAGATTGTTTAGTT+AGG - chr7_2:8266798-8266817 Msa1047380:CDS 25.0%
! TTCCTAACTAAACAATCTAA+AGG + chr7_2:8266803-8266822 None:intergenic 25.0%
! ATGTCAAAATAGAATTCACA+AGG + chr7_2:8266971-8266990 None:intergenic 25.0%
! TGCATATTCATTTATATCCA+CGG + chr7_2:8267459-8267478 None:intergenic 25.0%
! AAAAATCTAGTACTAAGCAA+CGG + chr7_2:8268670-8268689 None:intergenic 25.0%
! GAAATTTACAATCACAACAT+GGG + chr7_2:8268890-8268909 None:intergenic 25.0%
! AGAAATTTACAATCACAACA+TGG + chr7_2:8268891-8268910 None:intergenic 25.0%
!!! TTTGATTCCATTTTTTTCCT+TGG - chr7_2:8269090-8269109 Msa1047380:intron 25.0%
! AAGAAAACCAAGGAAAAAAA+TGG + chr7_2:8269100-8269119 None:intergenic 25.0%
! TGTTTGATAAAAGAAAACCA+AGG + chr7_2:8269110-8269129 None:intergenic 25.0%
!!! TTGGTTTTCTTTTATCAAAC+AGG - chr7_2:8269109-8269128 Msa1047380:intron 25.0%
!!! TATTTTTGAAAATCAGTACG+AGG + chr7_2:8269179-8269198 None:intergenic 25.0%
! TATATCAGATTAAAGAGAAG+TGG - chr7_2:8269197-8269216 Msa1047380:CDS 25.0%
!!! TTCTTGGTTGTTTTCTTTTT+TGG - chr7_2:8269251-8269270 Msa1047380:CDS 25.0%
! ATTTATCAGCTAAAATGTAC+CGG - chr7_2:8269362-8269381 Msa1047380:intron 25.0%
!! AAAAGAGTGTATCTAAAATC+TGG - chr7_2:8269819-8269838 Msa1047380:intron 25.0%
! TATATGGAAAAAAAAGGTTG+TGG + chr7_2:8269912-8269931 None:intergenic 25.0%
!!! ACAACCTTTTTTTTCCATAT+AGG - chr7_2:8269911-8269930 Msa1047380:CDS 25.0%
!!! GTTTTAAAGAGGTTTTACAA+TGG + chr7_2:8270202-8270221 None:intergenic 25.0%
! AATATTACACCTAAAAATCC+TGG + chr7_2:8270826-8270845 None:intergenic 25.0%
! TTCTTATTGGACTAACAATA+TGG - chr7_2:8270845-8270864 Msa1047380:intron 25.0%
! TGCCATGATATACATAATAA+TGG + chr7_2:8270960-8270979 None:intergenic 25.0%
!! GATTCTGGAAACATAAAATA+TGG - chr7_2:8271305-8271324 Msa1047380:five_prime_UTR 25.0%
! GAAACATAAAATATGGCAAA+TGG - chr7_2:8271312-8271331 Msa1047380:five_prime_UTR 25.0%
GCGATTATTATAAATGAAGC+GGG + chr7_2:8265140-8265159 None:intergenic 30.0%
AAGAAGATGAATAGTGAAAG+CGG + chr7_2:8265174-8265193 None:intergenic 30.0%
TTCGATTTCTTTCTTCTAGA+AGG + chr7_2:8265362-8265381 None:intergenic 30.0%
AAAGAAATCGAAGCAATCTT+CGG - chr7_2:8265370-8265389 Msa1047380:CDS 30.0%
! TAGGGTTTATTTCTTCATGT+TGG - chr7_2:8265940-8265959 Msa1047380:intron 30.0%
!!! TGTATAGTGTTTTGATGAAG+CGG - chr7_2:8266205-8266224 Msa1047380:intron 30.0%
! TAGTAATTTGCCACATCATT+CGG - chr7_2:8266257-8266276 Msa1047380:intron 30.0%
! TGATGTGATGAATGTTGTTT+AGG - chr7_2:8266505-8266524 Msa1047380:CDS 30.0%
! GATGTGATGAATGTTGTTTA+GGG - chr7_2:8266506-8266525 Msa1047380:CDS 30.0%
! ATGTGATGAATGTTGTTTAG+GGG - chr7_2:8266507-8266526 Msa1047380:CDS 30.0%
! AACAATATTTTACTGCCCAA+TGG - chr7_2:8266591-8266610 Msa1047380:intron 30.0%
!!! AACTCTTTCGTGTTTTGTTT+TGG - chr7_2:8266651-8266670 Msa1047380:CDS 30.0%
!!! ACTCTTTCGTGTTTTGTTTT+GGG - chr7_2:8266652-8266671 Msa1047380:CDS 30.0%
TCAAAATAGAATTCACAAGG+AGG + chr7_2:8266968-8266987 None:intergenic 30.0%
ACTTTCTCAAATGTTGACAA+TGG - chr7_2:8267013-8267032 Msa1047380:intron 30.0%
! TGAAGTCTCACTTTCTATTT+TGG + chr7_2:8267145-8267164 None:intergenic 30.0%
TCAACACTTTCAAATGAATC+TGG - chr7_2:8267162-8267181 Msa1047380:intron 30.0%
CAACACTTTCAAATGAATCT+GGG - chr7_2:8267163-8267182 Msa1047380:intron 30.0%
ACTTTACTGGATTTGTATTC+TGG - chr7_2:8267264-8267283 Msa1047380:CDS 30.0%
CTTTACTGGATTTGTATTCT+GGG - chr7_2:8267265-8267284 Msa1047380:CDS 30.0%
!!! TTGTTTTTGACTTGAAGAGA+TGG - chr7_2:8267432-8267451 Msa1047380:intron 30.0%
!!! TGTTTTTGACTTGAAGAGAT+GGG - chr7_2:8267433-8267452 Msa1047380:intron 30.0%
CTTTCCAAAATGTCAAATTC+AGG - chr7_2:8267606-8267625 Msa1047380:intron 30.0%
!! TTTTAAGTCTACTGAAAGAG+TGG - chr7_2:8267653-8267672 Msa1047380:CDS 30.0%
TTTAAGTCTACTGAAAGAGT+GGG - chr7_2:8267654-8267673 Msa1047380:CDS 30.0%
TGTGAGAAGTTTGTACTAAA+TGG - chr7_2:8267685-8267704 Msa1047380:intron 30.0%
! TTATAATCTTTCAGGTGCAA+TGG - chr7_2:8267955-8267974 Msa1047380:CDS 30.0%
TTGAGTACAAGTCAATAATG+AGG + chr7_2:8268233-8268252 None:intergenic 30.0%
!! AAGCTGATTTTATTTGTGGT+GGG - chr7_2:8268335-8268354 Msa1047380:intron 30.0%
!!! TGATTTTTTTCATCCTCCAA+TGG + chr7_2:8268412-8268431 None:intergenic 30.0%
TCAGCAACTAATTGTTTACA+TGG - chr7_2:8268429-8268448 Msa1047380:intron 30.0%
!!! GTTGACATTTTGAAATTTGC+TGG - chr7_2:8268499-8268518 Msa1047380:intron 30.0%
!!! ACATTTTGAAATTTGCTGGT+GGG - chr7_2:8268503-8268522 Msa1047380:intron 30.0%
TTCTTACTTCAAACTCAGTA+GGG + chr7_2:8268823-8268842 None:intergenic 30.0%
TTTCTTACTTCAAACTCAGT+AGG + chr7_2:8268824-8268843 None:intergenic 30.0%
TCTTTGTACTTTCATAATGC+AGG - chr7_2:8268922-8268941 Msa1047380:intron 30.0%
CAAAATGCAGTTCATATATG+CGG + chr7_2:8269388-8269407 None:intergenic 30.0%
! TCATCGGTGTTTAATTTCAA+AGG + chr7_2:8269611-8269630 None:intergenic 30.0%
TGTGCTAGTTAAAGAAAACA+AGG - chr7_2:8269776-8269795 Msa1047380:intron 30.0%
TTAAAGAAAACAAGGTGGAA+TGG - chr7_2:8269784-8269803 Msa1047380:intron 30.0%
TAAAGAAAACAAGGTGGAAT+GGG - chr7_2:8269785-8269804 Msa1047380:intron 30.0%
! AGATACACTCTTTTAACAGA+CGG + chr7_2:8269813-8269832 None:intergenic 30.0%
TACTAATTCTGTCTTGTCTT+AGG - chr7_2:8269853-8269872 Msa1047380:CDS 30.0%
ACTAATTCTGTCTTGTCTTA+GGG - chr7_2:8269854-8269873 Msa1047380:CDS 30.0%
GGAACCTATATGGAAAAAAA+AGG + chr7_2:8269918-8269937 None:intergenic 30.0%
ACAAATGTCATAGCATAATC+TGG + chr7_2:8269939-8269958 None:intergenic 30.0%
TATGCTATGACATTTGTTCA+CGG - chr7_2:8269942-8269961 Msa1047380:intron 30.0%
CATATATACATACTTAGAGG+AGG + chr7_2:8269970-8269989 None:intergenic 30.0%
GCACATATATACATACTTAG+AGG + chr7_2:8269973-8269992 None:intergenic 30.0%
!!! ATCTGACCATGTTTTTTGTT+TGG - chr7_2:8270288-8270307 Msa1047380:intron 30.0%
TCCAAAGTTATTCCATTTCT+AGG - chr7_2:8270381-8270400 Msa1047380:intron 30.0%
TATGAAAATTTGTGTATGCG+AGG + chr7_2:8270592-8270611 None:intergenic 30.0%
TCATATGAAGTTTACAGACA+AGG - chr7_2:8270645-8270664 Msa1047380:intron 30.0%
!!! TTTTTGGTTAAGGAATTGGA+AGG + chr7_2:8270721-8270740 None:intergenic 30.0%
!!! TCAGTTTTTGGTTAAGGAAT+TGG + chr7_2:8270725-8270744 None:intergenic 30.0%
!!! GGTTTATCAGTTTTTGGTTA+AGG + chr7_2:8270731-8270750 None:intergenic 30.0%
TATTTCCATCTTTAATGTGC+AGG - chr7_2:8270985-8271004 Msa1047380:intron 30.0%
TCATCATCAACTACATCTAA+AGG + chr7_2:8271149-8271168 None:intergenic 30.0%
!! TTAGATGTAGTTGATGATGA+TGG - chr7_2:8271149-8271168 Msa1047380:CDS 30.0%
! TGAAAAGACATGGATTAATG+AGG + chr7_2:8271191-8271210 None:intergenic 30.0%
AGATAACAGTTGAAAAGACA+TGG + chr7_2:8271201-8271220 None:intergenic 30.0%
!!! GCGTTTTTGAGGCATTTTTA+AGG + chr7_2:8265240-8265259 None:intergenic 35.0%
CTGATGAAGCACAAAAGAAA+TGG - chr7_2:8265435-8265454 Msa1047380:CDS 35.0%
! TGATGGGATTTTATATCAGC+TGG - chr7_2:8265695-8265714 Msa1047380:intron 35.0%
! GTTTTGTGGTACAATCATTC+GGG + chr7_2:8266120-8266139 None:intergenic 35.0%
! CGTTTTGTGGTACAATCATT+CGG + chr7_2:8266121-8266140 None:intergenic 35.0%
! TAGCCAGTAAAAATTTTGCC+TGG - chr7_2:8266157-8266176 Msa1047380:intron 35.0%
TGTGGCAAATTACTATTCCT+TGG + chr7_2:8266252-8266271 None:intergenic 35.0%
! AGTAATTTGCCACATCATTC+GGG - chr7_2:8266258-8266277 Msa1047380:intron 35.0%
! TGTGATGAATGTTGTTTAGG+GGG - chr7_2:8266508-8266527 Msa1047380:CDS 35.0%
TTCAATCTTTACCGTGTCTT+CGG + chr7_2:8266627-8266646 None:intergenic 35.0%
! TTTTGTCAACTAGATTCCCA+TGG + chr7_2:8266745-8266764 None:intergenic 35.0%
GGAATCTAGTTGACAAAAAG+AGG - chr7_2:8266747-8266766 Msa1047380:intron 35.0%
GCTGATAAAAATGCGGTTAA+AGG - chr7_2:8267201-8267220 Msa1047380:intron 35.0%
TTCTTGCATTAAGCTTGTCA+CGG - chr7_2:8267329-8267348 Msa1047380:intron 35.0%
! CTCACCTGAATTTGACATTT+TGG + chr7_2:8267613-8267632 None:intergenic 35.0%
CAAAATGTCAAATTCAGGTG+AGG - chr7_2:8267611-8267630 Msa1047380:CDS 35.0%
AGACTTAAAAAGTCTTCTGC+CGG + chr7_2:8267643-8267662 None:intergenic 35.0%
! ACAGATTCTGATTTGAATGC+TGG - chr7_2:8267718-8267737 Msa1047380:intron 35.0%
! AGACTACTCTCTATTTGCTA+TGG - chr7_2:8267814-8267833 Msa1047380:CDS 35.0%
ACGATTCCAGTTATGATACA+TGG - chr7_2:8267985-8268004 Msa1047380:CDS 35.0%
CGATTCCAGTTATGATACAT+GGG - chr7_2:8267986-8268005 Msa1047380:CDS 35.0%
TACAAGTCAATAATGAGGAG+TGG + chr7_2:8268228-8268247 None:intergenic 35.0%
AACCATTAGAGGTGAAAGAA+GGG + chr7_2:8268257-8268276 None:intergenic 35.0%
AAACCATTAGAGGTGAAAGA+AGG + chr7_2:8268258-8268277 None:intergenic 35.0%
!! GACAGTTGATAAACCATTAG+AGG + chr7_2:8268268-8268287 None:intergenic 35.0%
TACTACTTCATGCTTGTCTA+GGG - chr7_2:8268310-8268329 Msa1047380:intron 35.0%
CACCACAAATAAAATCAGCT+TGG + chr7_2:8268336-8268355 None:intergenic 35.0%
!! CAAGCTGATTTTATTTGTGG+TGG - chr7_2:8268334-8268353 Msa1047380:intron 35.0%
TTCTCCATGAGAACATACTT+AGG + chr7_2:8268475-8268494 None:intergenic 35.0%
!!! GACATTTTGAAATTTGCTGG+TGG - chr7_2:8268502-8268521 Msa1047380:intron 35.0%
ATGAATTATCAAGCTCGGAT+GGG - chr7_2:8268562-8268581 Msa1047380:intron 35.0%
! TTGTGCCCTTTTCTTAGATA+AGG - chr7_2:8268862-8268881 Msa1047380:intron 35.0%
GGGTTCCTTATCTAAGAAAA+GGG + chr7_2:8268870-8268889 None:intergenic 35.0%
TGGGTTCCTTATCTAAGAAA+AGG + chr7_2:8268871-8268890 None:intergenic 35.0%
TGTGAGCAAAAACAACATAC+CGG + chr7_2:8269031-8269050 None:intergenic 35.0%
ATTGCAATGAAAGATGTCAG+TGG - chr7_2:8269283-8269302 Msa1047380:CDS 35.0%
! AACTGCATTTTGTCTTACTC+TGG - chr7_2:8269396-8269415 Msa1047380:intron 35.0%
GCATATTGTTACATGTCACA+TGG - chr7_2:8269454-8269473 Msa1047380:CDS 35.0%
! CCAATTCAAGTTAGTGATGA+AGG + chr7_2:8269500-8269519 None:intergenic 35.0%
CCTTCATCACTAACTTGAAT+TGG - chr7_2:8269497-8269516 Msa1047380:CDS 35.0%
! ATATGTTTCTACTCCAGAGA+TGG - chr7_2:8269529-8269548 Msa1047380:intron 35.0%
TCCAGAGATGGTGAATTATT+CGG - chr7_2:8269541-8269560 Msa1047380:intron 35.0%
GCTAGTTAAAGAAAACAAGG+TGG - chr7_2:8269779-8269798 Msa1047380:intron 35.0%
! GATACACTCTTTTAACAGAC+GGG + chr7_2:8269812-8269831 None:intergenic 35.0%
CAAGACAGAATTAGTACCAA+CGG + chr7_2:8269849-8269868 None:intergenic 35.0%
! AGCATAATCTGGAACCTATA+TGG + chr7_2:8269928-8269947 None:intergenic 35.0%
ATGCTATGACATTTGTTCAC+GGG - chr7_2:8269943-8269962 Msa1047380:intron 35.0%
ATGTATCTGCTGAATACAAC+AGG - chr7_2:8270046-8270065 Msa1047380:intron 35.0%
! AAAGAGGTTTTACAATGGGA+GGG + chr7_2:8270197-8270216 None:intergenic 35.0%
! TAAAGAGGTTTTACAATGGG+AGG + chr7_2:8270198-8270217 None:intergenic 35.0%
TGAGAAATGTTATCGACCTT+AGG - chr7_2:8270233-8270252 Msa1047380:intron 35.0%
ATGCTAACATGATCATCCTA+AGG + chr7_2:8270252-8270271 None:intergenic 35.0%
ACAGGTCCAAACAAAAAACA+TGG + chr7_2:8270297-8270316 None:intergenic 35.0%
GCCTAGAAATGGAATAACTT+TGG + chr7_2:8270385-8270404 None:intergenic 35.0%
GTTCAAACTGGTATCTTATC+TGG - chr7_2:8270513-8270532 Msa1047380:intron 35.0%
ATGAAGTTTACAGACAAGGA+TGG - chr7_2:8270649-8270668 Msa1047380:intron 35.0%
ATGTACCTGCACATTAAAGA+TGG + chr7_2:8270993-8271012 None:intergenic 35.0%
CAAACCTAATGTGTATCCAA+GGG + chr7_2:8271054-8271073 None:intergenic 35.0%
ACATTAGGTTTGGCAATTCT+AGG - chr7_2:8271062-8271081 Msa1047380:CDS 35.0%
AGACAACTTGGGTACTTAAA+GGG + chr7_2:8271119-8271138 None:intergenic 35.0%
TAGACAACTTGGGTACTTAA+AGG + chr7_2:8271120-8271139 None:intergenic 35.0%
ATCAACTACATCTAAAGGAC+GGG + chr7_2:8271144-8271163 None:intergenic 35.0%
CATCAACTACATCTAAAGGA+CGG + chr7_2:8271145-8271164 None:intergenic 35.0%
TTCTAGGCCCTGAATATTAT+TGG + chr7_2:8271246-8271265 None:intergenic 35.0%
CTTGCATAATCATCAGTTGT+AGG + chr7_2:8271286-8271305 None:intergenic 35.0%
CTGATGATTATGCAAGATTC+TGG - chr7_2:8271290-8271309 Msa1047380:five_prime_UTR 35.0%
! GATTTACGAACGCGTTTTTG+AGG + chr7_2:8265251-8265270 None:intergenic 40.0%
TCGTTCCTCATTCTTCCAAA+CGG - chr7_2:8265288-8265307 Msa1047380:exon 40.0%
TTCTTCCGTTTGGAAGAATG+AGG + chr7_2:8265296-8265315 None:intergenic 40.0%
!! TTGTTTGGCTTTCTTCCGTT+TGG + chr7_2:8265306-8265325 None:intergenic 40.0%
GAAGAAAGCCAAACAATCTC+CGG - chr7_2:8265310-8265329 Msa1047380:CDS 40.0%
TTCTTCAACCGGAGATTGTT+TGG + chr7_2:8265321-8265340 None:intergenic 40.0%
GAAACCAGTTCTTCTTCAAC+CGG + chr7_2:8265332-8265351 None:intergenic 40.0%
! TTCTTTTGTGCTTCATCAGC+CGG + chr7_2:8265434-8265453 None:intergenic 40.0%
! GTTTTGTAGTGAATCGAGTG+AGG - chr7_2:8265629-8265648 Msa1047380:intron 40.0%
GAGTGAGGATGAAAGTTTGA+AGG - chr7_2:8265644-8265663 Msa1047380:intron 40.0%
! TGGGATTTTATATCAGCTGG+AGG - chr7_2:8265698-8265717 Msa1047380:intron 40.0%
! GGAGGATAATGCTTTTGTCA+AGG - chr7_2:8265716-8265735 Msa1047380:intron 40.0%
! TTCATTTCGCGAACGTTTTG+TGG + chr7_2:8266134-8266153 None:intergenic 40.0%
! CAGTAAAAATTTTGCCTGGC+CGG - chr7_2:8266161-8266180 Msa1047380:intron 40.0%
GGACTACATTGCTAAGATTG+TGG - chr7_2:8266544-8266563 Msa1047380:intron 40.0%
TTCGGCTCTGTAAAACCATT+GGG + chr7_2:8266609-8266628 None:intergenic 40.0%
!! TTGGGTTGCTTTGCTGTTTA+TGG - chr7_2:8266670-8266689 Msa1047380:CDS 40.0%
TGATTTGAATGTGTGTGTGC+AGG - chr7_2:8266709-8266728 Msa1047380:intron 40.0%
! CTACATGAAGCACTTACATC+AGG + chr7_2:8266848-8266867 None:intergenic 40.0%
TTTGGCAGCTGTATCAATCA+GGG + chr7_2:8267127-8267146 None:intergenic 40.0%
! TTTTGGCAGCTGTATCAATC+AGG + chr7_2:8267128-8267147 None:intergenic 40.0%
TTTATCAGCTGCATGGACAT+TGG + chr7_2:8267190-8267209 None:intergenic 40.0%
CCATGCAGCTGATAAAAATG+CGG - chr7_2:8267194-8267213 Msa1047380:intron 40.0%
AAGAATGTAATAGGCCTGAG+TGG - chr7_2:8267241-8267260 Msa1047380:intron 40.0%
AAATCCAGTAAAGTCCACTC+AGG + chr7_2:8267258-8267277 None:intergenic 40.0%
CAAAACGTACGTGAGTTTCT+GGG + chr7_2:8267505-8267524 None:intergenic 40.0%
!! CCTGGTTTTTCATCTTCGTT+GGG + chr7_2:8267844-8267863 None:intergenic 40.0%
!! TCCTGGTTTTTCATCTTCGT+TGG + chr7_2:8267845-8267864 None:intergenic 40.0%
!! CCTACTCTGAAATATAGTCC+TGG + chr7_2:8267862-8267881 None:intergenic 40.0%
CCAGGACTATATTTCAGAGT+AGG - chr7_2:8267859-8267878 Msa1047380:CDS 40.0%
! AATCTTTCAGGTGCAATGGA+AGG - chr7_2:8267959-8267978 Msa1047380:CDS 40.0%
! ATCTTTCAGGTGCAATGGAA+GGG - chr7_2:8267960-8267979 Msa1047380:CDS 40.0%
ATATACCTCAAGCCCTCAAT+GGG + chr7_2:8268014-8268033 None:intergenic 40.0%
AATATACCTCAAGCCCTCAA+TGG + chr7_2:8268015-8268034 None:intergenic 40.0%
ACCATTAGAGGTGAAAGAAG+GGG + chr7_2:8268256-8268275 None:intergenic 40.0%
GTACTACTTCATGCTTGTCT+AGG - chr7_2:8268309-8268328 Msa1047380:intron 40.0%
!! GGCCAAGCTGATTTTATTTG+TGG - chr7_2:8268331-8268350 Msa1047380:intron 40.0%
AAACCACTAACACCTTGACA+AGG + chr7_2:8268364-8268383 None:intergenic 40.0%
TTAGTGGTTTCAATCGCTTC+AGG - chr7_2:8268374-8268393 Msa1047380:intron 40.0%
CAGGAACAAAAATGCTCCAT+TGG - chr7_2:8268393-8268412 Msa1047380:intron 40.0%
GAACAAAAATGCTCCATTGG+AGG - chr7_2:8268396-8268415 Msa1047380:intron 40.0%
GAAGCCTAAGTATGTTCTCA+TGG - chr7_2:8268468-8268487 Msa1047380:CDS 40.0%
!! AAATTTGCTGGTGGGTTTCT+GGG - chr7_2:8268511-8268530 Msa1047380:intron 40.0%
GATAATTCATGGCCACTAGA+CGG + chr7_2:8268552-8268571 None:intergenic 40.0%
TGGCCATGAATTATCAAGCT+CGG - chr7_2:8268557-8268576 Msa1047380:intron 40.0%
! CATCCGAGCTTGATAATTCA+TGG + chr7_2:8268563-8268582 None:intergenic 40.0%
CATGAATTATCAAGCTCGGA+TGG - chr7_2:8268561-8268580 Msa1047380:intron 40.0%
CATATGGCCTTCCTCAATTT+CGG - chr7_2:8268602-8268621 Msa1047380:CDS 40.0%
AAAACACGCATCCGAAATTG+AGG + chr7_2:8268616-8268635 None:intergenic 40.0%
! TTCGGATGCGTGTTTTTCTT+TGG - chr7_2:8268620-8268639 Msa1047380:CDS 40.0%
! TCGGATGCGTGTTTTTCTTT+GGG - chr7_2:8268621-8268640 Msa1047380:CDS 40.0%
! GAGCTCTAACTACTGAAGTA+AGG - chr7_2:8268644-8268663 Msa1047380:CDS 40.0%
!! TGAGTTGGTAACGGATATGA+GGG + chr7_2:8268776-8268795 None:intergenic 40.0%
!! ATGAGTTGGTAACGGATATG+AGG + chr7_2:8268777-8268796 None:intergenic 40.0%
ATATCCGTTACCAACTCATG+AGG - chr7_2:8268778-8268797 Msa1047380:CDS 40.0%
!! TCAACCTCATGAGTTGGTAA+CGG + chr7_2:8268785-8268804 None:intergenic 40.0%
! CAGCTGACACTTTTCATTAG+TGG + chr7_2:8268966-8268985 None:intergenic 40.0%
!! CACTAATGAAAAGTGTCAGC+TGG - chr7_2:8268964-8268983 Msa1047380:CDS 40.0%
AGCAAAAACAACATACCGGT+GGG + chr7_2:8269027-8269046 None:intergenic 40.0%
AGCGATGATGAAAAGAGCTA+CGG - chr7_2:8269146-8269165 Msa1047380:CDS 40.0%
TGATCATACAGCATACCACT+TGG + chr7_2:8269584-8269603 None:intergenic 40.0%
GCAAACTCTCTCATAGTCAT+CGG + chr7_2:8269627-8269646 None:intergenic 40.0%
AGATATGGAACCTTCTCCTT+TGG + chr7_2:8269656-8269675 None:intergenic 40.0%
! TTGTGCTTGCTTGCCTTTTT+AGG - chr7_2:8269728-8269747 Msa1047380:intron 40.0%
! TGTGCTTGCTTGCCTTTTTA+GGG - chr7_2:8269729-8269748 Msa1047380:intron 40.0%
!! TTTTTAGGGGGCAAACTTCA+GGG - chr7_2:8269743-8269762 Msa1047380:intron 40.0%
! TCTAAAATCTGGAAAGCCGT+TGG - chr7_2:8269830-8269849 Msa1047380:intron 40.0%
TTGTGTCCACTGTTGTAACA+AGG - chr7_2:8270097-8270116 Msa1047380:intron 40.0%
TGTGTCCACTGTTGTAACAA+GGG - chr7_2:8270098-8270117 Msa1047380:intron 40.0%
CGAATAACAACCTGGTTATG+AGG + chr7_2:8270129-8270148 None:intergenic 40.0%
CACAACTTCGAATAACAACC+TGG + chr7_2:8270137-8270156 None:intergenic 40.0%
GAATGCTAAGAACTCTGTCT+TGG + chr7_2:8270423-8270442 None:intergenic 40.0%
TTAGCATTCGAGAGAATGCA+AGG - chr7_2:8270434-8270453 Msa1047380:intron 40.0%
ACACATACCTCTGTTTGACA+GGG + chr7_2:8270495-8270514 None:intergenic 40.0%
AACACATACCTCTGTTTGAC+AGG + chr7_2:8270496-8270515 None:intergenic 40.0%
! ACAGAGGTATGTGTTCAAAC+TGG - chr7_2:8270501-8270520 Msa1047380:intron 40.0%
ACTGCTCAATAACTCTCCTA+AGG - chr7_2:8270793-8270812 Msa1047380:CDS 40.0%
CTGCTCAATAACTCTCCTAA+GGG - chr7_2:8270794-8270813 Msa1047380:CDS 40.0%
TAATGTGTATCCAAGGGCAA+GGG + chr7_2:8271048-8271067 None:intergenic 40.0%
CCAAACCTAATGTGTATCCA+AGG + chr7_2:8271055-8271074 None:intergenic 40.0%
CCTTGGATACACATTAGGTT+TGG - chr7_2:8271052-8271071 Msa1047380:CDS 40.0%
GACAACTTGGGTACTTAAAG+GGG + chr7_2:8271118-8271137 None:intergenic 40.0%
! AGGAACGACTTCGTCTTGTT+TGG + chr7_2:8265276-8265295 None:intergenic 45.0%
ATCTCCGGTTGAAGAAGAAC+TGG - chr7_2:8265325-8265344 Msa1047380:CDS 45.0%
CTTCGTCGGAGAACTTATTC+CGG - chr7_2:8265412-8265431 Msa1047380:CDS 45.0%
CACAAAAGAAATGGCCTCAC+CGG - chr7_2:8265444-8265463 Msa1047380:CDS 45.0%
CTCACTCGTTCTTAGTGTAC+CGG + chr7_2:8265466-8265485 None:intergenic 45.0%
GTTTCACTATCGTGAAGCGA+AGG - chr7_2:8265671-8265690 Msa1047380:intron 45.0%
TATCGTGAAGCGAAGGTTGA+TGG - chr7_2:8265678-8265697 Msa1047380:intron 45.0%
! ATCGTGAAGCGAAGGTTGAT+GGG - chr7_2:8265679-8265698 Msa1047380:intron 45.0%
! CGGCCAGGCAAAATTTTTAC+TGG + chr7_2:8266163-8266182 None:intergenic 45.0%
AGCGAATGTGTATTCGCGAT+TGG + chr7_2:8266286-8266305 None:intergenic 45.0%
! GATGAATGTTGTTTAGGGGG+AGG - chr7_2:8266511-8266530 Msa1047380:CDS 45.0%
! AATGTTGTTTAGGGGGAGGA+AGG - chr7_2:8266515-8266534 Msa1047380:CDS 45.0%
CTTCGGCTCTGTAAAACCAT+TGG + chr7_2:8266610-8266629 None:intergenic 45.0%
! GTTTTACAGAGCCGAAGACA+CGG - chr7_2:8266613-8266632 Msa1047380:intron 45.0%
TGTGTGTGTGCAGGTGATTA+AGG - chr7_2:8266718-8266737 Msa1047380:intron 45.0%
TGCAGGTGATTAAGGACCAT+GGG - chr7_2:8266726-8266745 Msa1047380:intron 45.0%
! CCGCATTTTTATCAGCTGCA+TGG + chr7_2:8267197-8267216 None:intergenic 45.0%
CTGGATTTGTATTCTGGGTG+TGG - chr7_2:8267270-8267289 Msa1047380:CDS 45.0%
!! ATGTCCACTGGTCTTTGCTT+TGG - chr7_2:8267297-8267316 Msa1047380:CDS 45.0%
CCAAAACGTACGTGAGTTTC+TGG + chr7_2:8267506-8267525 None:intergenic 45.0%
! CCAGAAACTCACGTACGTTT+TGG - chr7_2:8267503-8267522 Msa1047380:CDS 45.0%
AATTCAGGTGAGGAATGAGC+CGG - chr7_2:8267621-8267640 Msa1047380:CDS 45.0%
TTGAATGCTGGTGAAGAAGC+TGG - chr7_2:8267730-8267749 Msa1047380:intron 45.0%
AGATGATTCACCTGACTCTG+AGG - chr7_2:8267777-8267796 Msa1047380:intron 45.0%
!! ACCTGACTCTGAGGTATTTG+AGG - chr7_2:8267786-8267805 Msa1047380:intron 45.0%
ACCTCAAATACCTCAGAGTC+AGG + chr7_2:8267790-8267809 None:intergenic 45.0%
CCCAACGAAGATGAAAAACC+AGG - chr7_2:8267841-8267860 Msa1047380:CDS 45.0%
ACCCCTTCTTTCACCTCTAA+TGG - chr7_2:8268252-8268271 Msa1047380:intron 45.0%
!! GAAATTTGCTGGTGGGTTTC+TGG - chr7_2:8268510-8268529 Msa1047380:intron 45.0%
!! AATTTGCTGGTGGGTTTCTG+GGG - chr7_2:8268512-8268531 Msa1047380:intron 45.0%
! CGGATGCGTGTTTTTCTTTG+GGG - chr7_2:8268622-8268641 Msa1047380:CDS 45.0%
CTGGATTCAACCTCATGAGT+TGG + chr7_2:8268791-8268810 None:intergenic 45.0%
! TGGCCAAGGCATTATACCTT+GGG - chr7_2:8268984-8269003 Msa1047380:CDS 45.0%
GAGCAAAAACAACATACCGG+TGG + chr7_2:8269028-8269047 None:intergenic 45.0%
GCGATGATGAAAAGAGCTAC+GGG - chr7_2:8269147-8269166 Msa1047380:CDS 45.0%
ATGCAGTTCATATATGCGGC+CGG + chr7_2:8269384-8269403 None:intergenic 45.0%
GCCGAATAATTCACCATCTC+TGG + chr7_2:8269545-8269564 None:intergenic 45.0%
GAGAGTTTGCCACATTCCAA+AGG - chr7_2:8269637-8269656 Msa1047380:CDS 45.0%
TTGCCACATTCCAAAGGAGA+AGG - chr7_2:8269643-8269662 Msa1047380:CDS 45.0%
!! GAACCTTCTCCTTTGGAATG+TGG + chr7_2:8269649-8269668 None:intergenic 45.0%
! GTGCTTGCTTGCCTTTTTAG+GGG - chr7_2:8269730-8269749 Msa1047380:intron 45.0%
!! TGCTTGCTTGCCTTTTTAGG+GGG - chr7_2:8269731-8269750 Msa1047380:intron 45.0%
CTGAAGTTTGCCCCCTAAAA+AGG + chr7_2:8269744-8269763 None:intergenic 45.0%
!! CTTTTTAGGGGGCAAACTTC+AGG - chr7_2:8269742-8269761 Msa1047380:intron 45.0%
GCTGAATACAACAGGCCATT+TGG - chr7_2:8270054-8270073 Msa1047380:intron 45.0%
AACAACCTGGTTATGAGGCT+CGG + chr7_2:8270124-8270143 None:intergenic 45.0%
GTTTGGACCTGTTGTGTAAG+TGG - chr7_2:8270305-8270324 Msa1047380:intron 45.0%
! AGTACTGCCACTTACACAAC+AGG + chr7_2:8270315-8270334 None:intergenic 45.0%
GATGGAGAAGAGCCTAGAAA+TGG + chr7_2:8270396-8270415 None:intergenic 45.0%
CTAAGAACTCTGTCTTGGTC+TGG + chr7_2:8270418-8270437 None:intergenic 45.0%
CCACAAAGCTTATAGCAGTC+TGG + chr7_2:8270472-8270491 None:intergenic 45.0%
CCAGACTGCTATAAGCTTTG+TGG - chr7_2:8270469-8270488 Msa1047380:intron 45.0%
AAATCCTGGACTGATCCCTT+AGG + chr7_2:8270812-8270831 None:intergenic 45.0%
! GGGATCAGTCCAGGATTTTT+AGG - chr7_2:8270814-8270833 Msa1047380:intron 45.0%
ATGTGCAGGTACATGCAAGT+TGG - chr7_2:8270999-8271018 Msa1047380:CDS 45.0%
CTAATGTGTATCCAAGGGCA+AGG + chr7_2:8271049-8271068 None:intergenic 45.0%
CTTGCCCTTGGATACACATT+AGG - chr7_2:8271047-8271066 Msa1047380:CDS 45.0%
!! ATTCTAGGACTCTCCGATGA+CGG - chr7_2:8271077-8271096 Msa1047380:CDS 45.0%
!! TTAAAGGGGAGCGTTGTCAA+AGG + chr7_2:8271104-8271123 None:intergenic 45.0%
ACTGAGCGGTTCAACAAGTG+CGG - chr7_2:8265067-8265086 Msa1047380:three_prime_UTR 50.0%
! TCGTTCTTAGTGTACCGGTG+AGG + chr7_2:8265461-8265480 None:intergenic 50.0%
! TTTTGCCTGGCCGGAAATCA+TGG - chr7_2:8266170-8266189 Msa1047380:intron 50.0%
TTTGCCTGGCCGGAAATCAT+GGG - chr7_2:8266171-8266190 Msa1047380:intron 50.0%
! CGATTGGTTCCCGAATGATG+TGG + chr7_2:8266270-8266289 None:intergenic 50.0%
TTAGGGGGAGGAAGGAAAAG+AGG - chr7_2:8266523-8266542 Msa1047380:intron 50.0%
GTGCAGGTGATTAAGGACCA+TGG - chr7_2:8266725-8266744 Msa1047380:intron 50.0%
! TAGGCCTGAGTGGACTTTAC+TGG - chr7_2:8267251-8267270 Msa1047380:intron 50.0%
TGCTCCAAAGCAAAGACCAG+TGG + chr7_2:8267304-8267323 None:intergenic 50.0%
GAAGAAGCTGGTGAAGAAGC+TGG - chr7_2:8267742-8267761 Msa1047380:intron 50.0%
GGGCTCCCATGTATCATAAC+TGG + chr7_2:8267994-8268013 None:intergenic 50.0%
TGATACATGGGAGCCCATTG+AGG - chr7_2:8267998-8268017 Msa1047380:CDS 50.0%
GATACATGGGAGCCCATTGA+GGG - chr7_2:8267999-8268018 Msa1047380:CDS 50.0%
GTGGTGAGACTTACAGGAAG+AGG + chr7_2:8268209-8268228 None:intergenic 50.0%
TGAGGAGTGGTGAGACTTAC+AGG + chr7_2:8268215-8268234 None:intergenic 50.0%
CCACTAACACCTTGACAAGG+TGG + chr7_2:8268361-8268380 None:intergenic 50.0%
! CCACCTTGTCAAGGTGTTAG+TGG - chr7_2:8268358-8268377 Msa1047380:intron 50.0%
!! TTTCTGGGGCGTTATGCTGT+AGG - chr7_2:8268526-8268545 Msa1047380:intron 50.0%
TTATGCTGTAGGCCGTCTAG+TGG - chr7_2:8268537-8268556 Msa1047380:intron 50.0%
TCAAGCTCGGATGGGAATGA+TGG - chr7_2:8268570-8268589 Msa1047380:intron 50.0%
ATGATGGCTGCAGGGTCATA+TGG - chr7_2:8268586-8268605 Msa1047380:intron 50.0%
CACGCATCCGAAATTGAGGA+AGG + chr7_2:8268612-8268631 None:intergenic 50.0%
CTCAGTAGGGATGACTGATC+TGG + chr7_2:8268810-8268829 None:intergenic 50.0%
!! TGAAAAGTGTCAGCTGGCCA+AGG - chr7_2:8268970-8268989 Msa1047380:CDS 50.0%
! CTGGCCAAGGCATTATACCT+TGG - chr7_2:8268983-8269002 Msa1047380:CDS 50.0%
! GGCCAAGGCATTATACCTTG+GGG - chr7_2:8268985-8269004 Msa1047380:CDS 50.0%
GTCCCCAAGGTATAATGCCT+TGG + chr7_2:8268990-8269009 None:intergenic 50.0%
GATCATCAATTGCGTCCCCA+AGG + chr7_2:8269003-8269022 None:intergenic 50.0%
! CGCAATTGATGATCTCCCAC+CGG - chr7_2:8269009-8269028 Msa1047380:intron 50.0%
GACTCTCAAAGTGCACCAAG+TGG - chr7_2:8269566-8269585 Msa1047380:intron 50.0%
CTTTAACTAGCACACCCTCG+AGG + chr7_2:8269770-8269789 None:intergenic 50.0%
! ACAGGCCATTTGGTCGACTT+TGG - chr7_2:8270064-8270083 Msa1047380:intron 50.0%
! GCCATTTGGTCGACTTTGGT+GGG - chr7_2:8270068-8270087 Msa1047380:intron 50.0%
TCCCACCAAAGTCGACCAAA+TGG + chr7_2:8270072-8270091 None:intergenic 50.0%
GAGGGTAGCATAAGTGGCAT+TGG + chr7_2:8270179-8270198 None:intergenic 50.0%
CAATGGGAGGGTAGCATAAG+TGG + chr7_2:8270185-8270204 None:intergenic 50.0%
GAACTCTGTCTTGGTCTGGA+TGG + chr7_2:8270414-8270433 None:intergenic 50.0%
CGAGAGAATGCAAGGCTACA+AGG - chr7_2:8270442-8270461 Msa1047380:intron 50.0%
TTTGTGGCCCTGTCAAACAG+AGG - chr7_2:8270485-8270504 Msa1047380:intron 50.0%
CGTTGTCAAAGGACCGTCAT+CGG + chr7_2:8271093-8271112 None:intergenic 50.0%
!! AAGGACGGGCTAGACAACTT+GGG + chr7_2:8271130-8271149 None:intergenic 50.0%
!! AAAGGACGGGCTAGACAACT+TGG + chr7_2:8271131-8271150 None:intergenic 50.0%
CTGAGCGGTTCAACAAGTGC+GGG - chr7_2:8265068-8265087 Msa1047380:three_prime_UTR 55.0%
TCCGACGATGCATGCTTCGT+CGG - chr7_2:8265398-8265417 Msa1047380:CDS 55.0%
TCCGACGAAGCATGCATCGT+CGG + chr7_2:8265402-8265421 None:intergenic 55.0%
TTGCCTGGCCGGAAATCATG+GGG - chr7_2:8266172-8266191 Msa1047380:intron 55.0%
ACCCACCACCCCATGATTTC+CGG + chr7_2:8266183-8266202 None:intergenic 55.0%
TGACTTGAAGAGATGGGCCG+TGG - chr7_2:8267439-8267458 Msa1047380:intron 55.0%
GGATGGGAATGATGGCTGCA+GGG - chr7_2:8268578-8268597 Msa1047380:intron 55.0%
GCAAACTTCAGGGACCTCGA+GGG - chr7_2:8269753-8269772 Msa1047380:intron 55.0%
! GGCCATTTGGTCGACTTTGG+TGG - chr7_2:8270067-8270086 Msa1047380:intron 55.0%
CTCGGCCCTTGTTACAACAG+TGG + chr7_2:8270106-8270125 None:intergenic 55.0%
CTCTCCTAAGGGATCAGTCC+AGG - chr7_2:8270805-8270824 Msa1047380:CDS 55.0%
TATCCAAGGGCAAGGGCAAC+AGG + chr7_2:8271041-8271060 None:intergenic 55.0%
GCCGGAAATCATGGGGTGGT+GGG - chr7_2:8266179-8266198 Msa1047380:intron 60.0%
GGGTGTGGAGCTATGTCCAC+TGG - chr7_2:8267285-8267304 Msa1047380:CDS 60.0%
!! TGTGGTGGGCCACCTTGTCA+AGG - chr7_2:8268349-8268368 Msa1047380:intron 60.0%
CGGATGGGAATGATGGCTGC+AGG - chr7_2:8268577-8268596 Msa1047380:intron 60.0%
GGCAAACTTCAGGGACCTCG+AGG - chr7_2:8269752-8269771 Msa1047380:intron 60.0%
AAGGGCCGAGCCTCATAACC+AGG - chr7_2:8270116-8270135 Msa1047380:intron 60.0%
GTTCCTGTTGCCCTTGCCCT+TGG - chr7_2:8271035-8271054 Msa1047380:CDS 60.0%
CCACCCCATGATTTCCGGCC+AGG + chr7_2:8266178-8266197 None:intergenic 65.0%
CCTGGCCGGAAATCATGGGG+TGG - chr7_2:8266175-8266194 Msa1047380:intron 65.0%
GGCCGGAAATCATGGGGTGG+TGG - chr7_2:8266178-8266197 Msa1047380:intron 65.0%
GGGAGCCCATTGAGGGCTTG+AGG - chr7_2:8268006-8268025 Msa1047380:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 8265062 8271408 8265062 ID=Msa1047380;Name=Msa1047380
chr7_2 mRNA 8265062 8271408 8265062 ID=Msa1047380-mRNA-1;Parent=Msa1047380;Name=Msa1047380-mRNA-1;_AED=0.14;_eAED=0.14;_QI=183|0.84|0.85|1|0.94|0.95|20|227|859
chr7_2 exon 8265062 8265463 8265062 ID=Msa1047380-mRNA-1:exon:2152;Parent=Msa1047380-mRNA-1
chr7_2 exon 8265964 8266067 8265964 ID=Msa1047380-mRNA-1:exon:2151;Parent=Msa1047380-mRNA-1
chr7_2 exon 8266333 8266429 8266333 ID=Msa1047380-mRNA-1:exon:2150;Parent=Msa1047380-mRNA-1
chr7_2 exon 8266494 8266537 8266494 ID=Msa1047380-mRNA-1:exon:2149;Parent=Msa1047380-mRNA-1
chr7_2 exon 8266619 8266720 8266619 ID=Msa1047380-mRNA-1:exon:2148;Parent=Msa1047380-mRNA-1
chr7_2 exon 8266776 8266924 8266776 ID=Msa1047380-mRNA-1:exon:2147;Parent=Msa1047380-mRNA-1
chr7_2 exon 8267252 8267339 8267252 ID=Msa1047380-mRNA-1:exon:2146;Parent=Msa1047380-mRNA-1
chr7_2 exon 8267440 8267526 8267440 ID=Msa1047380-mRNA-1:exon:2145;Parent=Msa1047380-mRNA-1
chr7_2 exon 8267611 8267703 8267611 ID=Msa1047380-mRNA-1:exon:2144;Parent=Msa1047380-mRNA-1
chr7_2 exon 8267810 8268139 8267810 ID=Msa1047380-mRNA-1:exon:2143;Parent=Msa1047380-mRNA-1
chr7_2 exon 8268256 8268322 8268256 ID=Msa1047380-mRNA-1:exon:2142;Parent=Msa1047380-mRNA-1
chr7_2 exon 8268443 8268501 8268443 ID=Msa1047380-mRNA-1:exon:2141;Parent=Msa1047380-mRNA-1
chr7_2 exon 8268594 8268842 8268594 ID=Msa1047380-mRNA-1:exon:2140;Parent=Msa1047380-mRNA-1
chr7_2 exon 8268956 8269021 8268956 ID=Msa1047380-mRNA-1:exon:2139;Parent=Msa1047380-mRNA-1
chr7_2 exon 8269120 8269334 8269120 ID=Msa1047380-mRNA-1:exon:2138;Parent=Msa1047380-mRNA-1
chr7_2 exon 8269436 8269526 8269436 ID=Msa1047380-mRNA-1:exon:2137;Parent=Msa1047380-mRNA-1
chr7_2 exon 8269620 8269739 8269620 ID=Msa1047380-mRNA-1:exon:2136;Parent=Msa1047380-mRNA-1
chr7_2 exon 8269836 8269943 8269836 ID=Msa1047380-mRNA-1:exon:2135;Parent=Msa1047380-mRNA-1
chr7_2 exon 8270733 8270832 8270733 ID=Msa1047380-mRNA-1:exon:2134;Parent=Msa1047380-mRNA-1
chr7_2 exon 8270990 8271408 8270990 ID=Msa1047380-mRNA-1:exon:2133;Parent=Msa1047380-mRNA-1
chr7_2 five_prime_UTR 8271226 8271408 8271226 ID=Msa1047380-mRNA-1:five_prime_utr;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8270990 8271225 8270990 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8270733 8270832 8270733 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8269836 8269943 8269836 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8269620 8269739 8269620 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8269436 8269526 8269436 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8269120 8269334 8269120 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8268956 8269021 8268956 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8268594 8268842 8268594 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8268443 8268501 8268443 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8268256 8268322 8268256 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8267810 8268139 8267810 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8267611 8267703 8267611 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8267440 8267526 8267440 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8267252 8267339 8267252 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8266776 8266924 8266776 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8266619 8266720 8266619 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8266494 8266537 8266494 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8266333 8266429 8266333 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8265964 8266067 8265964 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 CDS 8265289 8265463 8265289 ID=Msa1047380-mRNA-1:cds;Parent=Msa1047380-mRNA-1
chr7_2 three_prime_UTR 8265062 8265288 8265062 ID=Msa1047380-mRNA-1:three_prime_utr;Parent=Msa1047380-mRNA-1
Gene Sequence

>Msa1047380

ATGCCTCAAAAACGCGTTCGTAAATCTTCCAAACAAGACGAAGTCGTTCCTCATTCTTCCAAACGGAAGAAAGCCAAACAATCTCCGGTTGAAGAAGAACTGGTTTCGCTTCTTCCTTCTAGAAGAAAGAAATCGAAGCAATCTTCGGTTAATTCCGACGATGCATGCTTCGTCGGAGAACTTATTCCGGCTGATGAAGCACAAAAGAAATGGCCTCACCGGTACACTAAGAACGATGAATCGAGTGAGGATGAAAGTTTGAAGGCGAAGTTTCACTATCGTGAAGCGAAGGTTGATGGGATTTTATATCAGCTGGAGGATAATGCTTTTGTCAAGGGGGAGGAAGGAAAAGAGGACTACATTGCTAAGATTGTGGAGATGTTTGAAACTCCTGATGAAGAACAATATTTTACTGCCCAATGGTTTTACAGAGCCGAAGACACGGTGATTAAGGACCATGGGAATCTAGTTGACAAAAAGAGGATTTTCATATCTGATGTAAAAGATGAAAATCCTTTAGATTGTTTAGTTAGGAAAGTTAACATTGTACAAATTTCTCCTGATGCTGCAAAAAAGAAGAAAATTCCTCCTTGTGAATTCTATTTTGACATGAAGTACACTGTGCCCTATATAACTTTCTCAAATGTTGACAATGCAGCTGCCAAAATAGAAAGTGAGACTTCAACACTTTCAAATGAATCTGGGTCCAATGTCCATGCAGCTGATAAAAATGCGGTTAAAGGAAAATCAAGTCAAATTAAAGAATGTAATAGGCCTGAGTGGACTTTACTGGATTTGTATTCTGGGTGTGGAGCTATGTCCACTGGTCTTTGCTTTGGAGCATCTATTTCTTGCATTAAGCTTGTCACGAGATGGGCCGTGGATATAAATGAATATGCATGTGAGAGTCTCAAGCTGAATCACCCAGAAACTCACGTGAGGAATGAGCCGGCAGAAGACTTTTTAAGTCTACTGAAAGAGTGGGCTAAACTCTGTGAGAAGTTTGTACTAAATGGAGCAGAAAGTACAGATTCTGATTTGAATGCTGGTGAAGAAGCTGGTGAAGAAGCTGGTGATGAAGCTACAGATGATTCACCTGACTCTGAGGTATTTGAGGTTGAAAGACTACTCTCTATTTGCTATGGCGATCCCAACGAAGATGAAAAACCAGGACTATATTTCAGAGTGCAATGGAAGGGTTACGATTCCAGTTATGATACATGGGAGCCCATTGAGGGCTTGAGCGAGTGTAAAGATGCTATGAAAGATTTTGTTATAAATGGATATAAGGACAAGATATTGCCTCTTCCTGGCCAAGCTGATTTTATTTGTGGTGGGCCACCTTGTCAAGGTGTTAGTGGTTTCAATCGCTTCAGGAACAAAAATGCTCCATTGGAGGATGAAAAAAATCAGCAACTAATTGTTTACATGGACATCATCAATTTCTTGAAGCCTAAGTATGTTCTCATGGAGAACGTTGTTGACATTTTGAAATTTGCTGGTGGGTTTCTGGGGCGTTATGCTGTAGGCCGTCTAGTGGCCATGAATTATCAAGCTCGGATGGGAATGATGGCTGCAGGGTCATATGGCCTTCCTCAATTTCGGATGCGTGTTTTTCTTTGGGGAGCTCTAACTACTGAAAAATTACCCTCATATCCGTTACCAACTCATGAGGTTGAATCCAGATCAGTCATCCCTACTGAGTTTGAAGTAAGAAATGATAGAAATAGAGATGCAATAACAGTTGCATATTCCACTAATGAAAAGTGTCAGCTGGCCAAGGCATTATACCTTGGGGACGCAATTGATGATCTCCCACCGGTTGAAAATGATGATAGCGATGATGAAAAGAGCTACGGGACTACTCCTCGTACTGATTTTCAAAAATATATCAGATTAAAGAGAAGTGAGATGGTGAATTATTCGGCTGACTCTCAAAGTGCACCAAGTGGTATGCTGTATGATCATAGACCTTTGAAATTAAACACCGATGACTATGAGAGAGTTTGCCACATTCCAAAGGAGAAGGTTCCATATCTTGAATTGATATTATGTACTGGGGCAAACTTCAGGGACCTCGAGGGTGTGCTAGTTAAAGAAAACAAGGTGGAATGGGACCCGTCTGTTAAAAGAGTGTATCTAAAATCTGGAAAGCCGTTGGTTCCAGATTATGCTATGACATTTGTTCACGGGACCTCCTCTAATTCTTATGTATCTGCTGAATACAACAGGCCATTTGGTCGACTTTGGTGGGATGAAATTGTGTCCACTGTTGTAACAAGGGCCGAGCCTCATAACCAGGCTCTTCTCCATCCAGACCAAGACAGAGTTCTTAGCATTCGAGAGAATGCAAGGCTACAAGGATTTCCAGACTGCTATAAGCTTTGTGGCCCTGTCAAACAGAGGTACATGCAAGTTGGAAACGCAGTTGCTGTTCCTGTTGCCCTTGCCCTTGGATACACATTAGGTTTGGCAATTCTAGGACTCTCCGATGACGGTCCTTTGACAACGCTCCCCTTTAAGTACCCAAGTTGTCTAGCCCGTCCTTTAGATGTAGTTGATGATGATGGTTCAAGTTGA

Protein sequence

>Msa1047380

MPQKRVRKSSKQDEVVPHSSKRKKAKQSPVEEELVSLLPSRRKKSKQSSVNSDDACFVGELIPADEAQKKWPHRYTKNDESSEDESLKAKFHYREAKVDGILYQLEDNAFVKGEEGKEDYIAKIVEMFETPDEEQYFTAQWFYRAEDTVIKDHGNLVDKKRIFISDVKDENPLDCLVRKVNIVQISPDAAKKKKIPPCEFYFDMKYTVPYITFSNVDNAAAKIESETSTLSNESGSNVHAADKNAVKGKSSQIKECNRPEWTLLDLYSGCGAMSTGLCFGASISCIKLVTRWAVDINEYACESLKLNHPETHVRNEPAEDFLSLLKEWAKLCEKFVLNGAESTDSDLNAGEEAGEEAGDEATDDSPDSEVFEVERLLSICYGDPNEDEKPGLYFRVQWKGYDSSYDTWEPIEGLSECKDAMKDFVINGYKDKILPLPGQADFICGGPPCQGVSGFNRFRNKNAPLEDEKNQQLIVYMDIINFLKPKYVLMENVVDILKFAGGFLGRYAVGRLVAMNYQARMGMMAAGSYGLPQFRMRVFLWGALTTEKLPSYPLPTHEVESRSVIPTEFEVRNDRNRDAITVAYSTNEKCQLAKALYLGDAIDDLPPVENDDSDDEKSYGTTPRTDFQKYIRLKRSEMVNYSADSQSAPSGMLYDHRPLKLNTDDYERVCHIPKEKVPYLELILCTGANFRDLEGVLVKENKVEWDPSVKRVYLKSGKPLVPDYAMTFVHGTSSNSYVSAEYNRPFGRLWWDEIVSTVVTRAEPHNQALLHPDQDRVLSIRENARLQGFPDCYKLCGPVKQRYMQVGNAVAVPVALALGYTLGLAILGLSDDGPLTTLPFKYPSCLARPLDVVDDDGSS*