AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1134790


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1134790 MtrunA17_Chr7g0215341 94.103 831 41 2 1 827 1 827 0.0 1590
Msa1134790 MtrunA17_Chr6g0484831 90.060 835 75 3 1 827 1 835 0.0 1537
Msa1134790 MtrunA17_Chr5g0406641 91.018 835 66 4 1 826 1 835 0.0 1517
Msa1134790 MtrunA17_Chr4g0007641 79.265 844 157 7 1 827 1 843 0.0 1357
Msa1134790 MtrunA17_Chr6g0464681 69.329 864 190 9 1 827 1 826 0.0 1177
Msa1134790 MtrunA17_Chr6g0486931 55.115 782 314 11 57 811 146 917 0.0 871
Msa1134790 MtrunA17_Chr8g0369361 51.100 773 352 10 57 810 9 774 0.0 786
Msa1134790 MtrunA17_Chr5g0427891 59.475 343 138 1 469 811 1 342 2.40e-140 419
Msa1134790 MtrunA17_Chr2g0302601 33.777 376 205 8 429 794 1215 1556 2.36e-55 207
Msa1134790 MtrunA17_Chr6g0477371 33.777 376 205 8 429 794 1206 1547 4.04e-54 204
Msa1134790 MtrunA17_Chr4g0017221 33.511 376 206 8 429 794 1190 1531 9.01e-54 203
Msa1134790 MtrunA17_Chr8g0364091 44.068 177 86 6 125 289 37 212 1.41e-36 138
Msa1134790 MtrunA17_Chr8g0364111 77.273 66 15 0 745 810 3 68 6.54e-29 110
Msa1134790 MtrunA17_Chr5g0427881 58.462 65 27 0 380 444 39 103 6.91e-22 91.3
Msa1134790 MtrunA17_Chr5g0427871 47.115 104 46 2 57 151 38 141 8.00e-22 92.4
Msa1134790 MtrunA17_Chr3g0087051 34.545 165 84 4 638 794 2 150 1.32e-20 89.4
Msa1134790 MtrunA17_Chr2g0306841 36.364 88 56 0 544 631 15 102 1.73e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1134790 AT1G80740.1 51.677 805 334 11 42 814 4 785 0.0 814
Msa1134790 AT1G69770.1 51.551 838 361 14 1 807 1 824 0.0 813
Msa1134790 AT4G19020.1 50.582 773 349 8 57 810 523 1281 0.0 790
Msa1134790 AT4G19020.2 50.582 773 349 8 57 810 475 1233 0.0 790
Msa1134790 AT4G14140.3 35.310 371 206 7 429 794 1168 1509 9.17e-57 212
Msa1134790 AT4G14140.1 35.310 371 206 7 429 794 1168 1509 9.17e-57 212
Msa1134790 AT4G14140.2 35.310 371 206 7 429 794 1194 1535 1.68e-56 211
Msa1134790 AT4G08990.1 35.561 374 201 9 429 794 1161 1502 5.97e-55 207
Msa1134790 AT4G13610.1 34.409 372 196 8 429 794 1070 1399 1.07e-53 203
Msa1134790 AT5G49160.2 32.891 377 207 9 429 794 1095 1436 2.92e-50 192
Msa1134790 AT5G49160.1 32.891 377 207 9 429 794 1183 1524 3.80e-50 192

Find 203 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATTTGCTGGTGGGTTTC+TGG 0.008640 7_4:-1445843 Msa1134790:CDS
ACTTTACTGGATTTGTATTC+TGG 0.102309 7_4:-1447077 Msa1134790:CDS
CCAAAACGTACGTGAGTTTC+TGG 0.160369 7_4:+1446838 None:intergenic
TTCTAGGCCCTGAATATTAT+TGG 0.195110 7_4:+1443116 None:intergenic
TGAAGTCTCACTTTCTATTT+TGG 0.212259 7_4:+1447199 None:intergenic
TTGAACCTGCTCAGTGTAAA+TGG 0.244851 7_4:+1449306 None:intergenic
TCAACACTTTCAAATGAATC+TGG 0.268377 7_4:-1447179 Msa1134790:CDS
ACATTCATTTATACAATTCT+AGG 0.285423 7_4:+1443100 None:intergenic
TAGACAACTTGGGTACTTAA+AGG 0.288833 7_4:+1443242 None:intergenic
TGTGAGAAGTTTGTACTAAA+TGG 0.291004 7_4:-1446656 Msa1134790:CDS
ACATTAGGTTTGGCAATTCT+AGG 0.297456 7_4:-1443297 Msa1134790:CDS
TAGGCCTGAGTGGACTTTAC+TGG 0.302719 7_4:-1447090 Msa1134790:CDS
CTGATGATTATGCAAGATTC+TGG 0.311181 7_4:-1443069 Msa1134790:three_prime_UTR
GATTCTGGAAACATAAAATA+TGG 0.313320 7_4:-1443054 Msa1134790:three_prime_UTR
CTTGCCCTTGGATACACATT+AGG 0.317533 7_4:-1443312 Msa1134790:CDS
TTCGATTTCTTTCTTCTAGA+AGG 0.320245 7_4:+1449002 None:intergenic
TTCTTCAACCGGAGATTGTT+TGG 0.326628 7_4:+1449043 None:intergenic
AAATTTGCTGGTGGGTTTCT+GGG 0.327523 7_4:-1445842 Msa1134790:CDS
CCAGACTGCTATAAGCTTTG+TGG 0.329709 7_4:-1443890 Msa1134790:CDS
AACATTTGAGAAAGTTATAT+AGG 0.344153 7_4:+1447336 None:intergenic
CATCCGAGCTTGATAATTCA+TGG 0.344162 7_4:+1445793 None:intergenic
ATCCTTTAGATTGTTTAGTT+AGG 0.347736 7_4:-1447543 Msa1134790:CDS
CATATGGCCTTCCTCAATTT+CGG 0.349601 7_4:-1445751 Msa1134790:CDS
CCACCTTGTCAAGGTGTTAG+TGG 0.350266 7_4:-1445995 Msa1134790:CDS
ATGTCCACTGGTCTTTGCTT+TGG 0.352341 7_4:-1447044 Msa1134790:CDS
AGATATGGAACCTTCTCCTT+TGG 0.356040 7_4:+1444707 None:intergenic
CTTTACTGGATTTGTATTCT+GGG 0.362248 7_4:-1447076 Msa1134790:CDS
TTAGTGGTTTCAATCGCTTC+AGG 0.364770 7_4:-1445979 Msa1134790:CDS
GTCAAATTAAAGAATGTAAT+AGG 0.367477 7_4:-1447109 Msa1134790:CDS
GGGCTCCCATGTATCATAAC+TGG 0.370498 7_4:+1446362 None:intergenic
TATCCAAGGGCAAGGGCAAC+AGG 0.371847 7_4:+1443321 None:intergenic
AGGAACGACTTCGTCTTGTT+TGG 0.374277 7_4:+1449088 None:intergenic
GAAACATAAAATATGGCAAA+TGG 0.375563 7_4:-1443047 Msa1134790:three_prime_UTR
GTTCCTGTTGCCCTTGCCCT+TGG 0.380094 7_4:-1443324 Msa1134790:CDS
TTCAATCTTTACCGTGTCTT+CGG 0.381407 7_4:+1447717 None:intergenic
ACCTGACTCTGAGGTATTTG+AGG 0.384130 7_4:-1446567 Msa1134790:CDS
AACACATACCTCTGTTTGAC+AGG 0.386966 7_4:+1443866 None:intergenic
GTAAAATATTGTTCTTCATC+AGG 0.390612 7_4:+1447760 None:intergenic
AAAAGAGTGTATCTAAAATC+TGG 0.397497 7_4:-1444540 Msa1134790:CDS
ACAAATGTCATAGCATAATC+TGG 0.400607 7_4:+1444423 None:intergenic
TCCAGAGATGGTGAATTATT+CGG 0.404648 7_4:-1444819 Msa1134790:intron
AGACAACTTGGGTACTTAAA+GGG 0.412259 7_4:+1443243 None:intergenic
TTGTTTGGCTTTCTTCCGTT+TGG 0.415225 7_4:+1449058 None:intergenic
CCTTGGATACACATTAGGTT+TGG 0.421810 7_4:-1443307 Msa1134790:CDS
TGGCCAAGGCATTATACCTT+GGG 0.423475 7_4:-1445369 Msa1134790:CDS
ACATTTGAGAAAGTTATATA+GGG 0.426320 7_4:+1447337 None:intergenic
GCTGAATACAACAGGCCATT+TGG 0.427862 7_4:-1444305 Msa1134790:intron
ATGATGGCTGCAGGGTCATA+TGG 0.428980 7_4:-1445767 Msa1134790:CDS
TTCCTAACTAAACAATCTAA+AGG 0.433146 7_4:+1447541 None:intergenic
TATCGTGAAGCGAAGGTTGA+TGG 0.441672 7_4:-1448667 Msa1134790:CDS
CTTCGTCGGAGAACTTATTC+CGG 0.444090 7_4:-1448949 Msa1134790:CDS
ATGAGTTGGTAACGGATATG+AGG 0.447163 7_4:+1445579 None:intergenic
TAAAGAAAACAAGGTGGAAT+GGG 0.451055 7_4:-1444574 Msa1134790:CDS
GAAACCAGTTCTTCTTCAAC+CGG 0.452190 7_4:+1449032 None:intergenic
CTAAGAACTCTGTCTTGGTC+TGG 0.452322 7_4:+1443944 None:intergenic
CTGGATTTGTATTCTGGGTG+TGG 0.458568 7_4:-1447071 Msa1134790:CDS
CTGATGAAGCACAAAAGAAA+TGG 0.459268 7_4:-1448926 Msa1134790:CDS
CTTGCATAATCATCAGTTGT+AGG 0.460358 7_4:+1443076 None:intergenic
TTTCTTACTTCAAACTCAGT+AGG 0.462655 7_4:+1445532 None:intergenic
ATCTCCGGTTGAAGAAGAAC+TGG 0.462907 7_4:-1449036 Msa1134790:CDS
CTCAGTAGGGATGACTGATC+TGG 0.468959 7_4:+1445546 None:intergenic
CAACACTTTCAAATGAATCT+GGG 0.470283 7_4:-1447178 Msa1134790:CDS
CGAATAACAACCTGGTTATG+AGG 0.471305 7_4:+1444233 None:intergenic
ATGCTATGACATTTGTTCAC+GGG 0.472626 7_4:-1444416 Msa1134790:CDS
TTTCTGGGGCGTTATGCTGT+AGG 0.473896 7_4:-1445827 Msa1134790:CDS
CGGATGGGAATGATGGCTGC+AGG 0.474115 7_4:-1445776 Msa1134790:CDS
AAAGGACGGGCTAGACAACT+TGG 0.474566 7_4:+1443231 None:intergenic
ACAGGCCATTTGGTCGACTT+TGG 0.475021 7_4:-1444295 Msa1134790:intron
AATATACCTCAAGCCCTCAA+TGG 0.475252 7_4:+1446341 None:intergenic
ACCTCAAATACCTCAGAGTC+AGG 0.475532 7_4:+1446566 None:intergenic
TTCGGCTCTGTAAAACCATT+GGG 0.476357 7_4:+1447735 None:intergenic
CCACAAAGCTTATAGCAGTC+TGG 0.481850 7_4:+1443890 None:intergenic
ACGATTCCAGTTATGATACA+TGG 0.482110 7_4:-1446368 Msa1134790:CDS
TGTGTGTGTGCAGGTGATTA+AGG 0.483671 7_4:-1447623 Msa1134790:intron
AAACATAAAATATGGCAAAT+GGG 0.485354 7_4:-1443046 Msa1134790:three_prime_UTR
GCCATTTGGTCGACTTTGGT+GGG 0.487889 7_4:-1444291 Msa1134790:CDS
CGAGAGAATGCAAGGCTACA+AGG 0.488910 7_4:-1443917 Msa1134790:CDS
ATTTCCCATTTACACTGAGC+AGG 0.490849 7_4:-1449311 None:intergenic
TTTATCAGCTGCATGGACAT+TGG 0.493693 7_4:+1447154 None:intergenic
TTCTTACTTCAAACTCAGTA+GGG 0.495616 7_4:+1445533 None:intergenic
ATATACCTCAAGCCCTCAAT+GGG 0.497888 7_4:+1446342 None:intergenic
CTTCGGCTCTGTAAAACCAT+TGG 0.499873 7_4:+1447734 None:intergenic
TCATCATCAACTACATCTAA+AGG 0.502737 7_4:+1443213 None:intergenic
GGCCATTTGGTCGACTTTGG+TGG 0.503320 7_4:-1444292 Msa1134790:CDS
GATACATGGGAGCCCATTGA+GGG 0.504051 7_4:-1446354 Msa1134790:CDS
TGCATATTCATTTATATCCA+CGG 0.506267 7_4:+1446885 None:intergenic
CACAAAAGAAATGGCCTCAC+CGG 0.507084 7_4:-1448917 Msa1134790:CDS
GAACTCTGTCTTGGTCTGGA+TGG 0.507573 7_4:+1443948 None:intergenic
AAAGAAATCGAAGCAATCTT+CGG 0.508099 7_4:-1448991 Msa1134790:CDS
GGGTGTGGAGCTATGTCCAC+TGG 0.509075 7_4:-1447056 Msa1134790:CDS
TCATCGGTGTTTAATTTCAA+AGG 0.509674 7_4:+1444752 None:intergenic
TCAGCAACTAATTGTTTACA+TGG 0.512928 7_4:-1445924 Msa1134790:CDS
CACCACAAATAAAATCAGCT+TGG 0.514779 7_4:+1446020 None:intergenic
TTAAAGAAAACAAGGTGGAA+TGG 0.515036 7_4:-1444575 Msa1134790:CDS
TCCGACGATGCATGCTTCGT+CGG 0.515548 7_4:-1448963 Msa1134790:CDS
TTAGATGTAGTTGATGATGA+TGG 0.517459 7_4:-1443210 Msa1134790:CDS
GTCCCCAAGGTATAATGCCT+TGG 0.517822 7_4:+1445366 None:intergenic
ATCTTTCAGGTGCAATGGAA+GGG 0.518544 7_4:-1446393 Msa1134790:intron
AAGAAGATGAATAGTGAAAG+CGG 0.518886 7_4:+1449190 None:intergenic
TCAAGCTCGGATGGGAATGA+TGG 0.519547 7_4:-1445783 Msa1134790:CDS
CTGGCCAAGGCATTATACCT+TGG 0.521309 7_4:-1445370 Msa1134790:CDS
CACTAATGAAAAGTGTCAGC+TGG 0.523124 7_4:-1445389 Msa1134790:CDS
AAAACACGCATCCGAAATTG+AGG 0.524141 7_4:+1445740 None:intergenic
CAAAACGTACGTGAGTTTCT+GGG 0.525514 7_4:+1446839 None:intergenic
TCGTTCCTCATTCTTCCAAA+CGG 0.526193 7_4:-1449073 Msa1134790:CDS
TTATAATCTTTCAGGTGCAA+TGG 0.528275 7_4:-1446398 Msa1134790:intron
GAAGCCTAAGTATGTTCTCA+TGG 0.528299 7_4:-1445885 Msa1134790:CDS
AACAACCTGGTTATGAGGCT+CGG 0.528328 7_4:+1444238 None:intergenic
AATCTTTCAGGTGCAATGGA+AGG 0.528541 7_4:-1446394 Msa1134790:intron
TCCCACCAAAGTCGACCAAA+TGG 0.528934 7_4:+1444290 None:intergenic
CGATTATTTATAAATGAAGC+GGG 0.529429 7_4:+1449225 None:intergenic
CATGAATTATCAAGCTCGGA+TGG 0.529786 7_4:-1445792 Msa1134790:CDS
GAAGAAAGCCAAACAATCTC+CGG 0.530553 7_4:-1449051 Msa1134790:CDS
TTCTTCCGTTTGGAAGAATG+AGG 0.531258 7_4:+1449068 None:intergenic
ACAGATTCTGATTTGAATGC+TGG 0.534166 7_4:-1446623 Msa1134790:CDS
ATCAACTACATCTAAAGGAC+GGG 0.535962 7_4:+1443218 None:intergenic
CCAAACCTAATGTGTATCCA+AGG 0.536081 7_4:+1443307 None:intergenic
GAGTGAGGATGAAAGTTTGA+AGG 0.536508 7_4:-1448701 Msa1134790:CDS
TTGCCACATTCCAAAGGAGA+AGG 0.538842 7_4:-1444717 Msa1134790:intron
AGCAGGTTCAACAAAAGTGC+GGG 0.539930 7_4:-1449294 Msa1134790:five_prime_UTR
ATCGTGAAGCGAAGGTTGAT+GGG 0.542081 7_4:-1448666 Msa1134790:CDS
TATATCAGATTAAAGAGAAG+TGG 0.544554 7_4:-1445156 Msa1134790:intron
TTCTTGCATTAAGCTTGTCA+CGG 0.545328 7_4:-1447012 Msa1134790:intron
GCGATTATTTATAAATGAAG+CGG 0.548121 7_4:+1449224 None:intergenic
GAATGCTAAGAACTCTGTCT+TGG 0.555016 7_4:+1443939 None:intergenic
CTGGATTCAACCTCATGAGT+TGG 0.555366 7_4:+1445565 None:intergenic
GAACCTTCTCCTTTGGAATG+TGG 0.555858 7_4:+1444714 None:intergenic
GTGGTGAGACTTACAGGAAG+AGG 0.556985 7_4:+1446147 None:intergenic
ATGTGCAGGTACATGCAAGT+TGG 0.560046 7_4:-1443360 Msa1134790:intron
CTCACTCGTTCTTAGTGTAC+CGG 0.561833 7_4:+1448898 None:intergenic
CGTTGTCAAAGGACCGTCAT+CGG 0.561991 7_4:+1443269 None:intergenic
AGACTACTCTCTATTTGCTA+TGG 0.562696 7_4:-1446539 Msa1134790:CDS
TCTAAAATCTGGAAAGCCGT+TGG 0.563755 7_4:-1444529 Msa1134790:intron
AGCGATGATGAAAAGAGCTA+CGG 0.565697 7_4:-1445207 Msa1134790:CDS
AAGGGCCGAGCCTCATAACC+AGG 0.568054 7_4:-1444243 Msa1134790:intron
ATGAATTATCAAGCTCGGAT+GGG 0.571223 7_4:-1445791 Msa1134790:CDS
TGTGGTGGGCCACCTTGTCA+AGG 0.574035 7_4:-1446004 Msa1134790:CDS
TTGTGTCCACTGTTGTAACA+AGG 0.575348 7_4:-1444262 Msa1134790:CDS
TGAAAAGTGTCAGCTGGCCA+AGG 0.575456 7_4:-1445383 Msa1134790:CDS
AATTTGCTGGTGGGTTTCTG+GGG 0.576721 7_4:-1445841 Msa1134790:CDS
TTGAATGCTGGTGAAGAAGC+TGG 0.577481 7_4:-1446611 Msa1134790:CDS
TTCTCCATGAGAACATACTT+AGG 0.578027 7_4:+1445881 None:intergenic
CGCAATTGATGATCTCCCAC+CGG 0.580227 7_4:-1445344 Msa1134790:intron
CCTACTCTGAAATATAGTCC+TGG 0.581965 7_4:+1446494 None:intergenic
GGACTACATTGCTAAGATTG+TGG 0.583306 7_4:-1447797 Msa1134790:CDS
CTAATGTGTATCCAAGGGCA+AGG 0.584216 7_4:+1443313 None:intergenic
TGATACATGGGAGCCCATTG+AGG 0.584875 7_4:-1446355 Msa1134790:CDS
TGAAAAGACATGGATTAATG+AGG 0.588868 7_4:+1443171 None:intergenic
GACAACTTGGGTACTTAAAG+GGG 0.589664 7_4:+1443244 None:intergenic
TTAGCATTCGAGAGAATGCA+AGG 0.591436 7_4:-1443925 Msa1134790:CDS
GCGATGATGAAAAGAGCTAC+GGG 0.591951 7_4:-1445206 Msa1134790:CDS
GCAAACTCTCTCATAGTCAT+CGG 0.593163 7_4:+1444736 None:intergenic
TCCGACGAAGCATGCATCGT+CGG 0.593618 7_4:+1448962 None:intergenic
TTTAAGTCTACTGAAAGAGT+GGG 0.594108 7_4:-1446687 Msa1134790:CDS
TGACTTGAAGAGATGGGCCG+TGG 0.594840 7_4:-1446902 Msa1134790:intron
TGGCCATGAATTATCAAGCT+CGG 0.597417 7_4:-1445796 Msa1134790:CDS
CGATTCCAGTTATGATACAT+GGG 0.597731 7_4:-1446367 Msa1134790:CDS
GGGAGCCCATTGAGGGCTTG+AGG 0.601086 7_4:-1446347 Msa1134790:intron
GATAATTCATGGCCACTAGA+CGG 0.606811 7_4:+1445804 None:intergenic
ATTCTAGGACTCTCCGATGA+CGG 0.608856 7_4:-1443282 Msa1134790:CDS
TGCAGGTGATTAAGGACCAT+GGG 0.609611 7_4:-1447615 Msa1134790:intron
TTAAAGGGGAGCGTTGTCAA+AGG 0.611103 7_4:+1443258 None:intergenic
TGAGTTGGTAACGGATATGA+GGG 0.612406 7_4:+1445580 None:intergenic
TATGCTATGACATTTGTTCA+CGG 0.613180 7_4:-1444417 Msa1134790:CDS
GGCAAACTTCAGGGACCTCG+AGG 0.614201 7_4:-1444607 Msa1134790:CDS
GATCATCAATTGCGTCCCCA+AGG 0.614386 7_4:+1445353 None:intergenic
GTTTCACTATCGTGAAGCGA+AGG 0.614568 7_4:-1448674 Msa1134790:CDS
GAGAGTTTGCCACATTCCAA+AGG 0.615917 7_4:-1444723 Msa1134790:CDS
AGATAACAGTTGAAAAGACA+TGG 0.616171 7_4:+1443161 None:intergenic
CATCAACTACATCTAAAGGA+CGG 0.616327 7_4:+1443217 None:intergenic
AATTCAGGTGAGGAATGAGC+CGG 0.616828 7_4:-1446720 Msa1134790:intron
ACTTTCTCAAATGTTGACAA+TGG 0.620113 7_4:-1447328 Msa1134790:intron
TCAACCTCATGAGTTGGTAA+CGG 0.622459 7_4:+1445571 None:intergenic
TTATGCTGTAGGCCGTCTAG+TGG 0.625272 7_4:-1445816 Msa1134790:CDS
TGATCATACAGCATACCACT+TGG 0.627170 7_4:+1444779 None:intergenic
CACGCATCCGAAATTGAGGA+AGG 0.629581 7_4:+1445744 None:intergenic
GCAAACTTCAGGGACCTCGA+GGG 0.637506 7_4:-1444606 Msa1134790:CDS
CAAACCTAATGTGTATCCAA+GGG 0.638670 7_4:+1443308 None:intergenic
GGATGGGAATGATGGCTGCA+GGG 0.639348 7_4:-1445775 Msa1134790:CDS
TAATGTGTATCCAAGGGCAA+GGG 0.640727 7_4:+1443314 None:intergenic
AAGAATGTAATAGGCCTGAG+TGG 0.644520 7_4:-1447100 Msa1134790:CDS
TGCTCCAAAGCAAAGACCAG+TGG 0.647355 7_4:+1447040 None:intergenic
AAATCCAGTAAAGTCCACTC+AGG 0.651482 7_4:+1447086 None:intergenic
AGATGATTCACCTGACTCTG+AGG 0.655360 7_4:-1446576 Msa1134790:CDS
TGTGTCCACTGTTGTAACAA+GGG 0.656136 7_4:-1444261 Msa1134790:CDS
GAGCAGGTTCAACAAAAGTG+CGG 0.656242 7_4:-1449295 Msa1134790:five_prime_UTR
ACACATACCTCTGTTTGACA+GGG 0.662004 7_4:+1443867 None:intergenic
AAGGACGGGCTAGACAACTT+GGG 0.665885 7_4:+1443232 None:intergenic
ATATCCGTTACCAACTCATG+AGG 0.669953 7_4:-1445575 Msa1134790:CDS
ATGTCAAAATAGAATTCACA+AGG 0.670234 7_4:+1447373 None:intergenic
CTCGGCCCTTGTTACAACAG+TGG 0.671085 7_4:+1444256 None:intergenic
GTGCAGGTGATTAAGGACCA+TGG 0.674534 7_4:-1447616 Msa1134790:intron
GGCCAAGGCATTATACCTTG+GGG 0.678055 7_4:-1445368 Msa1134790:CDS
CATATATACATACTTAGAGG+AGG 0.681619 7_4:+1444392 None:intergenic
CCACTAACACCTTGACAAGG+TGG 0.683957 7_4:+1445995 None:intergenic
GACTCTCAAAGTGCACCAAG+TGG 0.685496 7_4:-1444794 Msa1134790:CDS
TTTGTGGCCCTGTCAAACAG+AGG 0.688111 7_4:-1443874 Msa1134790:intron
TCAAAATAGAATTCACAAGG+AGG 0.689598 7_4:+1447376 None:intergenic
TGTGCTAGTTAAAGAAAACA+AGG 0.696627 7_4:-1444583 Msa1134790:CDS
CTTTAACTAGCACACCCTCG+AGG 0.704914 7_4:+1444592 None:intergenic
GCTAGTTAAAGAAAACAAGG+TGG 0.715923 7_4:-1444580 Msa1134790:CDS
TCGTTCTTAGTGTACCGGTG+AGG 0.720228 7_4:+1448903 None:intergenic
AAACCACTAACACCTTGACA+AGG 0.729461 7_4:+1445992 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAATCATATATAAAATAA+CGG + chr7_4:1444257-1444276 None:intergenic 10.0%
!!! TTTATTTCATGTTGAAATTT+TGG - chr7_4:1443723-1443742 Msa1134790:intron 15.0%
!!! TGTTGAAAATTTTGTTTTTT+AGG - chr7_4:1443814-1443833 Msa1134790:intron 15.0%
!!! GTTGAAAATTTTGTTTTTTA+GGG - chr7_4:1443815-1443834 Msa1134790:intron 15.0%
!!! TGTTGTAAATTTTGTTTTTT+AGG - chr7_4:1443852-1443871 Msa1134790:intron 15.0%
!!! GTTGTAAATTTTGTTTTTTA+GGG - chr7_4:1443853-1443872 Msa1134790:intron 15.0%
!!! TTTTTTTTTTATGTTGATTG+TGG - chr7_4:1445032-1445051 Msa1134790:intron 15.0%
!! CTATAAATTTATAATCTTTC+AGG - chr7_4:1445870-1445889 Msa1134790:CDS 15.0%
!!! ATGAAAGATTTTGTTATAAA+TGG - chr7_4:1446087-1446106 Msa1134790:intron 15.0%
!!! TTTTGTTATAAATGGATATA+AGG - chr7_4:1446095-1446114 Msa1134790:intron 15.0%
!!! TTACTCTAAATGTTTTAAAA+TGG - chr7_4:1446633-1446652 Msa1134790:CDS 15.0%
!! CATATATTTCAATTTCAAAA+TGG + chr7_4:1448613-1448632 None:intergenic 15.0%
!! ATATAGAAGTTAGTTATAAT+AGG + chr7_4:1448669-1448688 None:intergenic 15.0%
!!! AAAAAAAAGTATGAAATCCA+AGG - chr7_4:1444167-1444186 Msa1134790:intron 20.0%
!!! TTTATGGTTATTGTTGATTT+TGG - chr7_4:1444621-1444640 Msa1134790:intron 20.0%
!!! ATGTTGATTTTATATACTAC+AGG - chr7_4:1444857-1444876 Msa1134790:intron 20.0%
!! ACATTTGAGAAAGTTATATA+GGG + chr7_4:1444942-1444961 None:intergenic 20.0%
!! AACATTTGAGAAAGTTATAT+AGG + chr7_4:1444943-1444962 None:intergenic 20.0%
!! GTCAAATTAAAGAATGTAAT+AGG - chr7_4:1445167-1445186 Msa1134790:CDS 20.0%
!!! TAATTTGCATAATGTTTCTT+TGG - chr7_4:1445296-1445315 Msa1134790:intron 20.0%
!! TTGCATAAGATAAAGTTATA+AGG + chr7_4:1445816-1445835 None:intergenic 20.0%
!!! ATAATCAATATCTTGATGAT+TGG + chr7_4:1445961-1445980 None:intergenic 20.0%
!!! TTAAGATTTGCTGTTAATTA+AGG - chr7_4:1445999-1446018 Msa1134790:CDS 20.0%
!!! TCTAAATGTTTTAAAATGGA+AGG - chr7_4:1446637-1446656 Msa1134790:CDS 20.0%
!!! TTTGAGTTTTGAATTATTCT+TGG - chr7_4:1447158-1447177 Msa1134790:CDS 20.0%
!! TATAATTAGAATTGTGTATG+TGG - chr7_4:1447342-1447361 Msa1134790:CDS 20.0%
!! CATAATATCAATTCAAGATA+TGG + chr7_4:1447587-1447606 None:intergenic 20.0%
!!! TTTTAAAGAGGTTTTACAAT+GGG + chr7_4:1448118-1448137 None:intergenic 20.0%
!!! AATACAACATTGTTTTAAAG+AGG + chr7_4:1448130-1448149 None:intergenic 20.0%
!! ATTTCAATTTCAAAATGGAA+GGG + chr7_4:1448608-1448627 None:intergenic 20.0%
!! TATTTCAATTTCAAAATGGA+AGG + chr7_4:1448609-1448628 None:intergenic 20.0%
!!! ATAATAGGTTTATCAGTTTT+TGG + chr7_4:1448654-1448673 None:intergenic 20.0%
!! TTAGGTGTAATATTTCTTAT+TGG - chr7_4:1448749-1448768 Msa1134790:intron 20.0%
!! TTCCATTATTATGTATATCA+TGG - chr7_4:1448872-1448891 Msa1134790:intron 20.0%
!!! TTTTTAAGCCAATAATATTC+AGG - chr7_4:1449152-1449171 Msa1134790:five_prime_UTR 20.0%
!!! TTTTAAGCCAATAATATTCA+GGG - chr7_4:1449153-1449172 Msa1134790:five_prime_UTR 20.0%
!! ACATTCATTTATACAATTCT+AGG + chr7_4:1449179-1449198 None:intergenic 20.0%
!! AAACATAAAATATGGCAAAT+GGG - chr7_4:1449230-1449249 Msa1134790:five_prime_UTR 20.0%
! CGATTATTTATAAATGAAGC+GGG + chr7_4:1443054-1443073 None:intergenic 25.0%
! GCGATTATTTATAAATGAAG+CGG + chr7_4:1443055-1443074 None:intergenic 25.0%
!!! TGTTGAAATTTTGGTGTTTT+AGG - chr7_4:1443732-1443751 Msa1134790:intron 25.0%
!!! GTTGAAATTTTGGTGTTTTA+GGG - chr7_4:1443733-1443752 Msa1134790:intron 25.0%
!! GCTTAAAATTGTGTGTTTTA+TGG - chr7_4:1443924-1443943 Msa1134790:CDS 25.0%
!! TTCATTTCTTTGATTTCTTG+TGG - chr7_4:1443947-1443966 Msa1134790:CDS 25.0%
! TTGATTTCTTGTGGAAAATT+TGG - chr7_4:1443956-1443975 Msa1134790:CDS 25.0%
!! CATGTTGAAAAATGTGTTTT+AGG - chr7_4:1444275-1444294 Msa1134790:CDS 25.0%
! GTAAAATATTGTTCTTCATC+AGG + chr7_4:1444519-1444538 None:intergenic 25.0%
! ATCCTTTAGATTGTTTAGTT+AGG - chr7_4:1444733-1444752 Msa1134790:CDS 25.0%
! TTCCTAACTAAACAATCTAA+AGG + chr7_4:1444738-1444757 None:intergenic 25.0%
! ATGTCAAAATAGAATTCACA+AGG + chr7_4:1444906-1444925 None:intergenic 25.0%
! TGCATATTCATTTATATCCA+CGG + chr7_4:1445394-1445413 None:intergenic 25.0%
! AAAAATCTAGTACTAAGCAA+CGG + chr7_4:1446593-1446612 None:intergenic 25.0%
! GAAATTTACAATCACAACAT+GGG + chr7_4:1446813-1446832 None:intergenic 25.0%
! AGAAATTTACAATCACAACA+TGG + chr7_4:1446814-1446833 None:intergenic 25.0%
! TGTTTGATAAAAGAAAACCA+AGG + chr7_4:1447033-1447052 None:intergenic 25.0%
!!! TTGGTTTTCTTTTATCAAAC+AGG - chr7_4:1447032-1447051 Msa1134790:CDS 25.0%
!!! TATTTTTGAAAATCAGTACG+AGG + chr7_4:1447102-1447121 None:intergenic 25.0%
! TATATCAGATTAAAGAGAAG+TGG - chr7_4:1447120-1447139 Msa1134790:CDS 25.0%
!!! TTCTTGGTTGTTTTCTTTTT+TGG - chr7_4:1447174-1447193 Msa1134790:CDS 25.0%
! ATTTATCAGCTAAAATGTAC+CGG - chr7_4:1447278-1447297 Msa1134790:intron 25.0%
!! AAAAGAGTGTATCTAAAATC+TGG - chr7_4:1447736-1447755 Msa1134790:CDS 25.0%
! TATATGGAAAAAAAAGGTTG+TGG + chr7_4:1447829-1447848 None:intergenic 25.0%
!!! ACAACCTTTTTTTTCCATAT+AGG - chr7_4:1447828-1447847 Msa1134790:intron 25.0%
!!! GTTTTAAAGAGGTTTTACAA+TGG + chr7_4:1448119-1448138 None:intergenic 25.0%
! AATATTACACCTAAAAATCC+TGG + chr7_4:1448743-1448762 None:intergenic 25.0%
! TTCTTATTGGACTAACAATA+TGG - chr7_4:1448762-1448781 Msa1134790:intron 25.0%
! TGCCATGATATACATAATAA+TGG + chr7_4:1448877-1448896 None:intergenic 25.0%
!! GATTCTGGAAACATAAAATA+TGG - chr7_4:1449222-1449241 Msa1134790:five_prime_UTR 25.0%
! GAAACATAAAATATGGCAAA+TGG - chr7_4:1449229-1449248 Msa1134790:five_prime_UTR 25.0%
AAGAAGATGAATAGTGAAAG+CGG + chr7_4:1443089-1443108 None:intergenic 30.0%
TTCGATTTCTTTCTTCTAGA+AGG + chr7_4:1443277-1443296 None:intergenic 30.0%
AAAGAAATCGAAGCAATCTT+CGG - chr7_4:1443285-1443304 Msa1134790:CDS 30.0%
! TAGGGTTTATTTCTTCATGT+TGG - chr7_4:1443871-1443890 Msa1134790:intron 30.0%
!!! TGTATAGTGTTTTGATGAAG+CGG - chr7_4:1444140-1444159 Msa1134790:intron 30.0%
! TAGTAATTTGCCACATCATT+CGG - chr7_4:1444192-1444211 Msa1134790:intron 30.0%
! TGATGTGATGAATGTTGTTT+AGG - chr7_4:1444440-1444459 Msa1134790:intron 30.0%
! GATGTGATGAATGTTGTTTA+GGG - chr7_4:1444441-1444460 Msa1134790:intron 30.0%
! ATGTGATGAATGTTGTTTAG+GGG - chr7_4:1444442-1444461 Msa1134790:intron 30.0%
! AACAATATTTTACTGCCCAA+TGG - chr7_4:1444526-1444545 Msa1134790:intron 30.0%
!!! AACTCTTTCGTGTTTTGTTT+TGG - chr7_4:1444586-1444605 Msa1134790:CDS 30.0%
TCAAAATAGAATTCACAAGG+AGG + chr7_4:1444903-1444922 None:intergenic 30.0%
ACTTTCTCAAATGTTGACAA+TGG - chr7_4:1444948-1444967 Msa1134790:intron 30.0%
! TGAAGTCTCACTTTCTATTT+TGG + chr7_4:1445080-1445099 None:intergenic 30.0%
TCAACACTTTCAAATGAATC+TGG - chr7_4:1445097-1445116 Msa1134790:intron 30.0%
CAACACTTTCAAATGAATCT+GGG - chr7_4:1445098-1445117 Msa1134790:intron 30.0%
ACTTTACTGGATTTGTATTC+TGG - chr7_4:1445199-1445218 Msa1134790:CDS 30.0%
CTTTACTGGATTTGTATTCT+GGG - chr7_4:1445200-1445219 Msa1134790:CDS 30.0%
!!! TTGTTTTTGACTTGAAGAGA+TGG - chr7_4:1445367-1445386 Msa1134790:CDS 30.0%
!!! TGTTTTTGACTTGAAGAGAT+GGG - chr7_4:1445368-1445387 Msa1134790:CDS 30.0%
CTTTCCAAAATGTCAAATTC+AGG - chr7_4:1445541-1445560 Msa1134790:CDS 30.0%
!! TTTTAAGTCTACTGAAAGAG+TGG - chr7_4:1445588-1445607 Msa1134790:CDS 30.0%
TTTAAGTCTACTGAAAGAGT+GGG - chr7_4:1445589-1445608 Msa1134790:CDS 30.0%
TGTGAGAAGTTTGTACTAAA+TGG - chr7_4:1445620-1445639 Msa1134790:intron 30.0%
! TTATAATCTTTCAGGTGCAA+TGG - chr7_4:1445878-1445897 Msa1134790:CDS 30.0%
TTGAGTACAAGTCAATAATG+AGG + chr7_4:1446156-1446175 None:intergenic 30.0%
!! AAGCTGATTTTATTTGTGGT+GGG - chr7_4:1446258-1446277 Msa1134790:intron 30.0%
!!! TGATTTTTTTCATCCTCCAA+TGG + chr7_4:1446335-1446354 None:intergenic 30.0%
TCAGCAACTAATTGTTTACA+TGG - chr7_4:1446352-1446371 Msa1134790:CDS 30.0%
!!! GTTGACATTTTGAAATTTGC+TGG - chr7_4:1446422-1446441 Msa1134790:intron 30.0%
!!! ACATTTTGAAATTTGCTGGT+GGG - chr7_4:1446426-1446445 Msa1134790:intron 30.0%
TTCTTACTTCAAACTCAGTA+GGG + chr7_4:1446746-1446765 None:intergenic 30.0%
TTTCTTACTTCAAACTCAGT+AGG + chr7_4:1446747-1446766 None:intergenic 30.0%
TCTTTGTACTTTCATAATGC+AGG - chr7_4:1446845-1446864 Msa1134790:intron 30.0%
TTTGATTCCATTTCTTTCCT+TGG - chr7_4:1447013-1447032 Msa1134790:CDS 30.0%
AAGAAAACCAAGGAAAGAAA+TGG + chr7_4:1447023-1447042 None:intergenic 30.0%
CAAAATGCAGTTCATATATG+CGG + chr7_4:1447304-1447323 None:intergenic 30.0%
! TCATCGGTGTTTAATTTCAA+AGG + chr7_4:1447527-1447546 None:intergenic 30.0%
TGTGCTAGTTAAAGAAAACA+AGG - chr7_4:1447693-1447712 Msa1134790:intron 30.0%
TTAAAGAAAACAAGGTGGAA+TGG - chr7_4:1447701-1447720 Msa1134790:intron 30.0%
TAAAGAAAACAAGGTGGAAT+GGG - chr7_4:1447702-1447721 Msa1134790:intron 30.0%
! AGATACACTCTTTTAACAGA+CGG + chr7_4:1447730-1447749 None:intergenic 30.0%
TACTAATTCTGTCTTGTCTT+AGG - chr7_4:1447770-1447789 Msa1134790:CDS 30.0%
ACTAATTCTGTCTTGTCTTA+GGG - chr7_4:1447771-1447790 Msa1134790:CDS 30.0%
GGAACCTATATGGAAAAAAA+AGG + chr7_4:1447835-1447854 None:intergenic 30.0%
ACAAATGTCATAGCATAATC+TGG + chr7_4:1447856-1447875 None:intergenic 30.0%
TATGCTATGACATTTGTTCA+CGG - chr7_4:1447859-1447878 Msa1134790:intron 30.0%
CATATATACATACTTAGAGG+AGG + chr7_4:1447887-1447906 None:intergenic 30.0%
GCACATATATACATACTTAG+AGG + chr7_4:1447890-1447909 None:intergenic 30.0%
!!! ATCTGACCATGTTTTTTGTT+TGG - chr7_4:1448205-1448224 Msa1134790:intron 30.0%
TCCAAAGTTATTCCATTTCT+AGG - chr7_4:1448298-1448317 Msa1134790:intron 30.0%
TATGAAAATTTGTGTATGCG+AGG + chr7_4:1448509-1448528 None:intergenic 30.0%
TCATATGAAGTTTACAGACA+AGG - chr7_4:1448562-1448581 Msa1134790:intron 30.0%
!!! TTTTTGGTTAAGGAATTGGA+AGG + chr7_4:1448638-1448657 None:intergenic 30.0%
!!! TCAGTTTTTGGTTAAGGAAT+TGG + chr7_4:1448642-1448661 None:intergenic 30.0%
!!! GGTTTATCAGTTTTTGGTTA+AGG + chr7_4:1448648-1448667 None:intergenic 30.0%
TATTTCCATCTTTAATGTGC+AGG - chr7_4:1448902-1448921 Msa1134790:intron 30.0%
TCATCATCAACTACATCTAA+AGG + chr7_4:1449066-1449085 None:intergenic 30.0%
!! TTAGATGTAGTTGATGATGA+TGG - chr7_4:1449066-1449085 Msa1134790:CDS 30.0%
! TGAAAAGACATGGATTAATG+AGG + chr7_4:1449108-1449127 None:intergenic 30.0%
AGATAACAGTTGAAAAGACA+TGG + chr7_4:1449118-1449137 None:intergenic 30.0%
!!! GCGTTTTTGAGGCATTTTTA+AGG + chr7_4:1443155-1443174 None:intergenic 35.0%
CTGATGAAGCACAAAAGAAA+TGG - chr7_4:1443350-1443369 Msa1134790:CDS 35.0%
! TGATGGGATTTTATATCAGC+TGG - chr7_4:1443626-1443645 Msa1134790:intron 35.0%
! GTTTTGTGGTACAATCATTC+GGG + chr7_4:1444055-1444074 None:intergenic 35.0%
! CGTTTTGTGGTACAATCATT+CGG + chr7_4:1444056-1444075 None:intergenic 35.0%
! TAGCCAGTAAAAATTTTGCC+TGG - chr7_4:1444092-1444111 Msa1134790:intron 35.0%
TGTGGCAAATTACTATTCCT+TGG + chr7_4:1444187-1444206 None:intergenic 35.0%
! AGTAATTTGCCACATCATTC+GGG - chr7_4:1444193-1444212 Msa1134790:intron 35.0%
! TGTGATGAATGTTGTTTAGG+GGG - chr7_4:1444443-1444462 Msa1134790:intron 35.0%
TTCAATCTTTACCGTGTCTT+CGG + chr7_4:1444562-1444581 None:intergenic 35.0%
!! TTGGTTTGCTTTGCTGTTTA+TGG - chr7_4:1444605-1444624 Msa1134790:CDS 35.0%
! TTTTGTCAACTAGATTCCCA+TGG + chr7_4:1444680-1444699 None:intergenic 35.0%
GGAATCTAGTTGACAAAAAG+AGG - chr7_4:1444682-1444701 Msa1134790:intron 35.0%
GCTGATAAAAATGCGGTTAA+AGG - chr7_4:1445136-1445155 Msa1134790:intron 35.0%
TTCTTGCATTAAGCTTGTCA+CGG - chr7_4:1445264-1445283 Msa1134790:intron 35.0%
! CTCACCTGAATTTGACATTT+TGG + chr7_4:1445548-1445567 None:intergenic 35.0%
CAAAATGTCAAATTCAGGTG+AGG - chr7_4:1445546-1445565 Msa1134790:CDS 35.0%
AGACTTAAAAAGTCTTCTGC+CGG + chr7_4:1445578-1445597 None:intergenic 35.0%
! ACAGATTCTGATTTGAATGC+TGG - chr7_4:1445653-1445672 Msa1134790:intron 35.0%
! AGACTACTCTCTATTTGCTA+TGG - chr7_4:1445737-1445756 Msa1134790:CDS 35.0%
ACGATTCCAGTTATGATACA+TGG - chr7_4:1445908-1445927 Msa1134790:CDS 35.0%
CGATTCCAGTTATGATACAT+GGG - chr7_4:1445909-1445928 Msa1134790:CDS 35.0%
TACAAGTCAATAATGAGGAG+TGG + chr7_4:1446151-1446170 None:intergenic 35.0%
AACCATTAGAGGTGAAAGAA+GGG + chr7_4:1446180-1446199 None:intergenic 35.0%
AAACCATTAGAGGTGAAAGA+AGG + chr7_4:1446181-1446200 None:intergenic 35.0%
!! GACAGTTGATAAACCATTAG+AGG + chr7_4:1446191-1446210 None:intergenic 35.0%
TACTACTTCATGCTTGTCTA+GGG - chr7_4:1446233-1446252 Msa1134790:intron 35.0%
CACCACAAATAAAATCAGCT+TGG + chr7_4:1446259-1446278 None:intergenic 35.0%
!! CAAGCTGATTTTATTTGTGG+TGG - chr7_4:1446257-1446276 Msa1134790:intron 35.0%
TTCTCCATGAGAACATACTT+AGG + chr7_4:1446398-1446417 None:intergenic 35.0%
!!! GACATTTTGAAATTTGCTGG+TGG - chr7_4:1446425-1446444 Msa1134790:intron 35.0%
ATGAATTATCAAGCTCGGAT+GGG - chr7_4:1446485-1446504 Msa1134790:intron 35.0%
! TTGTGCCCTTTTCTTAGATA+AGG - chr7_4:1446785-1446804 Msa1134790:intron 35.0%
GGGTTCCTTATCTAAGAAAA+GGG + chr7_4:1446793-1446812 None:intergenic 35.0%
TGGGTTCCTTATCTAAGAAA+AGG + chr7_4:1446794-1446813 None:intergenic 35.0%
ATTGCAATGAAAGATGTCAG+TGG - chr7_4:1447206-1447225 Msa1134790:intron 35.0%
! AACTGCATTTTGTCTTACTC+TGG - chr7_4:1447312-1447331 Msa1134790:intron 35.0%
GCATATTGTTACATGTCACA+TGG - chr7_4:1447370-1447389 Msa1134790:CDS 35.0%
! CCAATTCAAGTTAGTGATGA+AGG + chr7_4:1447416-1447435 None:intergenic 35.0%
CCTTCATCACTAACTTGAAT+TGG - chr7_4:1447413-1447432 Msa1134790:intron 35.0%
! ATATGTTTCTACTCCAGAGA+TGG - chr7_4:1447445-1447464 Msa1134790:intron 35.0%
TCCAGAGATGGTGAATTATT+CGG - chr7_4:1447457-1447476 Msa1134790:intron 35.0%
GCTAGTTAAAGAAAACAAGG+TGG - chr7_4:1447696-1447715 Msa1134790:intron 35.0%
! GATACACTCTTTTAACAGAC+GGG + chr7_4:1447729-1447748 None:intergenic 35.0%
CAAGACAGAATTAGTACCAA+CGG + chr7_4:1447766-1447785 None:intergenic 35.0%
! AGCATAATCTGGAACCTATA+TGG + chr7_4:1447845-1447864 None:intergenic 35.0%
ATGCTATGACATTTGTTCAC+GGG - chr7_4:1447860-1447879 Msa1134790:intron 35.0%
ATGTATCTGCTGAATACAAC+AGG - chr7_4:1447963-1447982 Msa1134790:intron 35.0%
! AAAGAGGTTTTACAATGGGA+GGG + chr7_4:1448114-1448133 None:intergenic 35.0%
! TAAAGAGGTTTTACAATGGG+AGG + chr7_4:1448115-1448134 None:intergenic 35.0%
TGAGAAATGTTATCGACCTT+AGG - chr7_4:1448150-1448169 Msa1134790:intron 35.0%
ATGCTAACATGATCATCCTA+AGG + chr7_4:1448169-1448188 None:intergenic 35.0%
ACAGGTCCAAACAAAAAACA+TGG + chr7_4:1448214-1448233 None:intergenic 35.0%
GCCTAGAAATGGAATAACTT+TGG + chr7_4:1448302-1448321 None:intergenic 35.0%
GTTCAAACTGGTATCTTATC+TGG - chr7_4:1448430-1448449 Msa1134790:intron 35.0%
ATGAAGTTTACAGACAAGGA+TGG - chr7_4:1448566-1448585 Msa1134790:intron 35.0%
ATGTACCTGCACATTAAAGA+TGG + chr7_4:1448910-1448929 None:intergenic 35.0%
CAAACCTAATGTGTATCCAA+GGG + chr7_4:1448971-1448990 None:intergenic 35.0%
ACATTAGGTTTGGCAATTCT+AGG - chr7_4:1448979-1448998 Msa1134790:CDS 35.0%
AGACAACTTGGGTACTTAAA+GGG + chr7_4:1449036-1449055 None:intergenic 35.0%
TAGACAACTTGGGTACTTAA+AGG + chr7_4:1449037-1449056 None:intergenic 35.0%
ATCAACTACATCTAAAGGAC+GGG + chr7_4:1449061-1449080 None:intergenic 35.0%
CATCAACTACATCTAAAGGA+CGG + chr7_4:1449062-1449081 None:intergenic 35.0%
TTCTAGGCCCTGAATATTAT+TGG + chr7_4:1449163-1449182 None:intergenic 35.0%
CTTGCATAATCATCAGTTGT+AGG + chr7_4:1449203-1449222 None:intergenic 35.0%
CTGATGATTATGCAAGATTC+TGG - chr7_4:1449207-1449226 Msa1134790:five_prime_UTR 35.0%
! GATTTACGAACGCGTTTTTG+AGG + chr7_4:1443166-1443185 None:intergenic 40.0%
TCGTTCCTCATTCTTCCAAA+CGG - chr7_4:1443203-1443222 Msa1134790:CDS 40.0%
TTCTTCCGTTTGGAAGAATG+AGG + chr7_4:1443211-1443230 None:intergenic 40.0%
!! TTGTTTGGCTTTCTTCCGTT+TGG + chr7_4:1443221-1443240 None:intergenic 40.0%
GAAGAAAGCCAAACAATCTC+CGG - chr7_4:1443225-1443244 Msa1134790:CDS 40.0%
TTCTTCAACCGGAGATTGTT+TGG + chr7_4:1443236-1443255 None:intergenic 40.0%
GAAACCAGTTCTTCTTCAAC+CGG + chr7_4:1443247-1443266 None:intergenic 40.0%
! TTCTTTTGTGCTTCATCAGC+CGG + chr7_4:1443349-1443368 None:intergenic 40.0%
! GTTTTGTAGTGAATCGAGTG+AGG - chr7_4:1443560-1443579 Msa1134790:intron 40.0%
GAGTGAGGATGAAAGTTTGA+AGG - chr7_4:1443575-1443594 Msa1134790:intron 40.0%
! TGGGATTTTATATCAGCTGG+AGG - chr7_4:1443629-1443648 Msa1134790:intron 40.0%
! GGAGGATAATGCTTTTGTCA+AGG - chr7_4:1443647-1443666 Msa1134790:intron 40.0%
! TTCATTTCGCGAACGTTTTG+TGG + chr7_4:1444069-1444088 None:intergenic 40.0%
! CAGTAAAAATTTTGCCTGGC+CGG - chr7_4:1444096-1444115 Msa1134790:intron 40.0%
GGACTACATTGCTAAGATTG+TGG - chr7_4:1444479-1444498 Msa1134790:intron 40.0%
TTCGGCTCTGTAAAACCATT+GGG + chr7_4:1444544-1444563 None:intergenic 40.0%
TGATTTGAATGTGTGTGTGC+AGG - chr7_4:1444644-1444663 Msa1134790:intron 40.0%
! CTACATGAAGCACTTACATC+AGG + chr7_4:1444783-1444802 None:intergenic 40.0%
TTTGGCAGCTGTATCAATCA+GGG + chr7_4:1445062-1445081 None:intergenic 40.0%
! TTTTGGCAGCTGTATCAATC+AGG + chr7_4:1445063-1445082 None:intergenic 40.0%
TTTATCAGCTGCATGGACAT+TGG + chr7_4:1445125-1445144 None:intergenic 40.0%
CCATGCAGCTGATAAAAATG+CGG - chr7_4:1445129-1445148 Msa1134790:intron 40.0%
AAGAATGTAATAGGCCTGAG+TGG - chr7_4:1445176-1445195 Msa1134790:CDS 40.0%
AAATCCAGTAAAGTCCACTC+AGG + chr7_4:1445193-1445212 None:intergenic 40.0%
CAAAACGTACGTGAGTTTCT+GGG + chr7_4:1445440-1445459 None:intergenic 40.0%
!! CCTGGTTTTTCATCTTCGTT+GGG + chr7_4:1445767-1445786 None:intergenic 40.0%
!! TCCTGGTTTTTCATCTTCGT+TGG + chr7_4:1445768-1445787 None:intergenic 40.0%
!! CCTACTCTGAAATATAGTCC+TGG + chr7_4:1445785-1445804 None:intergenic 40.0%
CCAGGACTATATTTCAGAGT+AGG - chr7_4:1445782-1445801 Msa1134790:CDS 40.0%
! AATCTTTCAGGTGCAATGGA+AGG - chr7_4:1445882-1445901 Msa1134790:CDS 40.0%
! ATCTTTCAGGTGCAATGGAA+GGG - chr7_4:1445883-1445902 Msa1134790:CDS 40.0%
ATATACCTCAAGCCCTCAAT+GGG + chr7_4:1445937-1445956 None:intergenic 40.0%
AATATACCTCAAGCCCTCAA+TGG + chr7_4:1445938-1445957 None:intergenic 40.0%
ACCATTAGAGGTGAAAGAAG+GGG + chr7_4:1446179-1446198 None:intergenic 40.0%
GTACTACTTCATGCTTGTCT+AGG - chr7_4:1446232-1446251 Msa1134790:intron 40.0%
!! GGCCAAGCTGATTTTATTTG+TGG - chr7_4:1446254-1446273 Msa1134790:intron 40.0%
AAACCACTAACACCTTGACA+AGG + chr7_4:1446287-1446306 None:intergenic 40.0%
TTAGTGGTTTCAATCGCTTC+AGG - chr7_4:1446297-1446316 Msa1134790:intron 40.0%
CAGGAACAAAAATGCTCCAT+TGG - chr7_4:1446316-1446335 Msa1134790:intron 40.0%
GAACAAAAATGCTCCATTGG+AGG - chr7_4:1446319-1446338 Msa1134790:intron 40.0%
GAAGCCTAAGTATGTTCTCA+TGG - chr7_4:1446391-1446410 Msa1134790:intron 40.0%
!! AAATTTGCTGGTGGGTTTCT+GGG - chr7_4:1446434-1446453 Msa1134790:intron 40.0%
GATAATTCATGGCCACTAGA+CGG + chr7_4:1446475-1446494 None:intergenic 40.0%
TGGCCATGAATTATCAAGCT+CGG - chr7_4:1446480-1446499 Msa1134790:intron 40.0%
! CATCCGAGCTTGATAATTCA+TGG + chr7_4:1446486-1446505 None:intergenic 40.0%
CATGAATTATCAAGCTCGGA+TGG - chr7_4:1446484-1446503 Msa1134790:intron 40.0%
CATATGGCCTTCCTCAATTT+CGG - chr7_4:1446525-1446544 Msa1134790:CDS 40.0%
AAAACACGCATCCGAAATTG+AGG + chr7_4:1446539-1446558 None:intergenic 40.0%
! TTCGGATGCGTGTTTTTCTT+TGG - chr7_4:1446543-1446562 Msa1134790:CDS 40.0%
! TCGGATGCGTGTTTTTCTTT+GGG - chr7_4:1446544-1446563 Msa1134790:CDS 40.0%
! GAGCTCTAACTACTGAAGTA+AGG - chr7_4:1446567-1446586 Msa1134790:CDS 40.0%
!! TGAGTTGGTAACGGATATGA+GGG + chr7_4:1446699-1446718 None:intergenic 40.0%
!! ATGAGTTGGTAACGGATATG+AGG + chr7_4:1446700-1446719 None:intergenic 40.0%
ATATCCGTTACCAACTCATG+AGG - chr7_4:1446701-1446720 Msa1134790:CDS 40.0%
!! TCAACCTCATGAGTTGGTAA+CGG + chr7_4:1446708-1446727 None:intergenic 40.0%
! CAGCTGACACTTTTCATTAG+TGG + chr7_4:1446889-1446908 None:intergenic 40.0%
!! CACTAATGAAAAGTGTCAGC+TGG - chr7_4:1446887-1446906 Msa1134790:CDS 40.0%
AGCAAAAACAACATACCGGT+GGG + chr7_4:1446950-1446969 None:intergenic 40.0%
AGCGATGATGAAAAGAGCTA+CGG - chr7_4:1447069-1447088 Msa1134790:CDS 40.0%
TGATCATACAGCATACCACT+TGG + chr7_4:1447500-1447519 None:intergenic 40.0%
GCAAACTCTCTCATAGTCAT+CGG + chr7_4:1447543-1447562 None:intergenic 40.0%
AGATATGGAACCTTCTCCTT+TGG + chr7_4:1447572-1447591 None:intergenic 40.0%
! TTGTGCTTGCTTGCCTTTTT+AGG - chr7_4:1447645-1447664 Msa1134790:intron 40.0%
! TGTGCTTGCTTGCCTTTTTA+GGG - chr7_4:1447646-1447665 Msa1134790:intron 40.0%
!! TTTTTAGGGGGCAAACTTCA+GGG - chr7_4:1447660-1447679 Msa1134790:intron 40.0%
! TCTAAAATCTGGAAAGCCGT+TGG - chr7_4:1447747-1447766 Msa1134790:CDS 40.0%
TTGTGTCCACTGTTGTAACA+AGG - chr7_4:1448014-1448033 Msa1134790:intron 40.0%
TGTGTCCACTGTTGTAACAA+GGG - chr7_4:1448015-1448034 Msa1134790:intron 40.0%
CGAATAACAACCTGGTTATG+AGG + chr7_4:1448046-1448065 None:intergenic 40.0%
CACAACTTCGAATAACAACC+TGG + chr7_4:1448054-1448073 None:intergenic 40.0%
GAATGCTAAGAACTCTGTCT+TGG + chr7_4:1448340-1448359 None:intergenic 40.0%
TTAGCATTCGAGAGAATGCA+AGG - chr7_4:1448351-1448370 Msa1134790:intron 40.0%
ACACATACCTCTGTTTGACA+GGG + chr7_4:1448412-1448431 None:intergenic 40.0%
AACACATACCTCTGTTTGAC+AGG + chr7_4:1448413-1448432 None:intergenic 40.0%
! ACAGAGGTATGTGTTCAAAC+TGG - chr7_4:1448418-1448437 Msa1134790:intron 40.0%
ACTGCTCAATAACTCTCCTA+AGG - chr7_4:1448710-1448729 Msa1134790:CDS 40.0%
CTGCTCAATAACTCTCCTAA+GGG - chr7_4:1448711-1448730 Msa1134790:intron 40.0%
TAATGTGTATCCAAGGGCAA+GGG + chr7_4:1448965-1448984 None:intergenic 40.0%
CCAAACCTAATGTGTATCCA+AGG + chr7_4:1448972-1448991 None:intergenic 40.0%
CCTTGGATACACATTAGGTT+TGG - chr7_4:1448969-1448988 Msa1134790:CDS 40.0%
GACAACTTGGGTACTTAAAG+GGG + chr7_4:1449035-1449054 None:intergenic 40.0%
GAGCAGGTTCAACAAAAGTG+CGG - chr7_4:1442981-1443000 Msa1134790:three_prime_UTR 45.0%
! AGCAGGTTCAACAAAAGTGC+GGG - chr7_4:1442982-1443001 Msa1134790:three_prime_UTR 45.0%
! AGGAACGACTTCGTCTTGTT+TGG + chr7_4:1443191-1443210 None:intergenic 45.0%
ATCTCCGGTTGAAGAAGAAC+TGG - chr7_4:1443240-1443259 Msa1134790:CDS 45.0%
CTTCGTCGGAGAACTTATTC+CGG - chr7_4:1443327-1443346 Msa1134790:CDS 45.0%
CACAAAAGAAATGGCCTCAC+CGG - chr7_4:1443359-1443378 Msa1134790:intron 45.0%
CTCACTCGTTCTTAGTGTAC+CGG + chr7_4:1443381-1443400 None:intergenic 45.0%
GTTTCACTATCGTGAAGCGA+AGG - chr7_4:1443602-1443621 Msa1134790:intron 45.0%
TATCGTGAAGCGAAGGTTGA+TGG - chr7_4:1443609-1443628 Msa1134790:intron 45.0%
! ATCGTGAAGCGAAGGTTGAT+GGG - chr7_4:1443610-1443629 Msa1134790:intron 45.0%
! CGGCCAGGCAAAATTTTTAC+TGG + chr7_4:1444098-1444117 None:intergenic 45.0%
AGCGAATGTGTATTCGCGAT+TGG + chr7_4:1444221-1444240 None:intergenic 45.0%
! GATGAATGTTGTTTAGGGGG+AGG - chr7_4:1444446-1444465 Msa1134790:intron 45.0%
! AATGTTGTTTAGGGGGAGGA+AGG - chr7_4:1444450-1444469 Msa1134790:intron 45.0%
CTTCGGCTCTGTAAAACCAT+TGG + chr7_4:1444545-1444564 None:intergenic 45.0%
! GTTTTACAGAGCCGAAGACA+CGG - chr7_4:1444548-1444567 Msa1134790:CDS 45.0%
TGTGTGTGTGCAGGTGATTA+AGG - chr7_4:1444653-1444672 Msa1134790:intron 45.0%
TGCAGGTGATTAAGGACCAT+GGG - chr7_4:1444661-1444680 Msa1134790:intron 45.0%
! CCGCATTTTTATCAGCTGCA+TGG + chr7_4:1445132-1445151 None:intergenic 45.0%
CTGGATTTGTATTCTGGGTG+TGG - chr7_4:1445205-1445224 Msa1134790:CDS 45.0%
!! ATGTCCACTGGTCTTTGCTT+TGG - chr7_4:1445232-1445251 Msa1134790:intron 45.0%
CCAAAACGTACGTGAGTTTC+TGG + chr7_4:1445441-1445460 None:intergenic 45.0%
! CCAGAAACTCACGTACGTTT+TGG - chr7_4:1445438-1445457 Msa1134790:intron 45.0%
AATTCAGGTGAGGAATGAGC+CGG - chr7_4:1445556-1445575 Msa1134790:CDS 45.0%
TTGAATGCTGGTGAAGAAGC+TGG - chr7_4:1445665-1445684 Msa1134790:intron 45.0%
AGATGATTCACCTGACTCTG+AGG - chr7_4:1445700-1445719 Msa1134790:intron 45.0%
!! ACCTGACTCTGAGGTATTTG+AGG - chr7_4:1445709-1445728 Msa1134790:intron 45.0%
ACCTCAAATACCTCAGAGTC+AGG + chr7_4:1445713-1445732 None:intergenic 45.0%
CCCAACGAAGATGAAAAACC+AGG - chr7_4:1445764-1445783 Msa1134790:CDS 45.0%
ACCCCTTCTTTCACCTCTAA+TGG - chr7_4:1446175-1446194 Msa1134790:CDS 45.0%
!! GAAATTTGCTGGTGGGTTTC+TGG - chr7_4:1446433-1446452 Msa1134790:intron 45.0%
!! AATTTGCTGGTGGGTTTCTG+GGG - chr7_4:1446435-1446454 Msa1134790:intron 45.0%
! CGGATGCGTGTTTTTCTTTG+GGG - chr7_4:1446545-1446564 Msa1134790:CDS 45.0%
CTGGATTCAACCTCATGAGT+TGG + chr7_4:1446714-1446733 None:intergenic 45.0%
! TGGCCAAGGCATTATACCTT+GGG - chr7_4:1446907-1446926 Msa1134790:intron 45.0%
GAGCAAAAACAACATACCGG+TGG + chr7_4:1446951-1446970 None:intergenic 45.0%
GCGATGATGAAAAGAGCTAC+GGG - chr7_4:1447070-1447089 Msa1134790:CDS 45.0%
ATGCAGTTCATATATGCGGC+CGG + chr7_4:1447300-1447319 None:intergenic 45.0%
GCCGAATAATTCACCATCTC+TGG + chr7_4:1447461-1447480 None:intergenic 45.0%
GAGAGTTTGCCACATTCCAA+AGG - chr7_4:1447553-1447572 Msa1134790:CDS 45.0%
TTGCCACATTCCAAAGGAGA+AGG - chr7_4:1447559-1447578 Msa1134790:CDS 45.0%
!! GAACCTTCTCCTTTGGAATG+TGG + chr7_4:1447565-1447584 None:intergenic 45.0%
! GTGCTTGCTTGCCTTTTTAG+GGG - chr7_4:1447647-1447666 Msa1134790:intron 45.0%
!! TGCTTGCTTGCCTTTTTAGG+GGG - chr7_4:1447648-1447667 Msa1134790:intron 45.0%
CTGAAGTTTGCCCCCTAAAA+AGG + chr7_4:1447661-1447680 None:intergenic 45.0%
!! CTTTTTAGGGGGCAAACTTC+AGG - chr7_4:1447659-1447678 Msa1134790:intron 45.0%
GCTGAATACAACAGGCCATT+TGG - chr7_4:1447971-1447990 Msa1134790:intron 45.0%
AACAACCTGGTTATGAGGCT+CGG + chr7_4:1448041-1448060 None:intergenic 45.0%
GTTTGGACCTGTTGTGTAAG+TGG - chr7_4:1448222-1448241 Msa1134790:intron 45.0%
! AGTACTGCCACTTACACAAC+AGG + chr7_4:1448232-1448251 None:intergenic 45.0%
GATGGAGAAGAGCCTAGAAA+TGG + chr7_4:1448313-1448332 None:intergenic 45.0%
CTAAGAACTCTGTCTTGGTC+TGG + chr7_4:1448335-1448354 None:intergenic 45.0%
CCACAAAGCTTATAGCAGTC+TGG + chr7_4:1448389-1448408 None:intergenic 45.0%
CCAGACTGCTATAAGCTTTG+TGG - chr7_4:1448386-1448405 Msa1134790:intron 45.0%
AAATCCTGGACTGATCCCTT+AGG + chr7_4:1448729-1448748 None:intergenic 45.0%
! GGGATCAGTCCAGGATTTTT+AGG - chr7_4:1448731-1448750 Msa1134790:intron 45.0%
ATGTGCAGGTACATGCAAGT+TGG - chr7_4:1448916-1448935 Msa1134790:CDS 45.0%
CTAATGTGTATCCAAGGGCA+AGG + chr7_4:1448966-1448985 None:intergenic 45.0%
CTTGCCCTTGGATACACATT+AGG - chr7_4:1448964-1448983 Msa1134790:CDS 45.0%
!! ATTCTAGGACTCTCCGATGA+CGG - chr7_4:1448994-1449013 Msa1134790:CDS 45.0%
!! TTAAAGGGGAGCGTTGTCAA+AGG + chr7_4:1449021-1449040 None:intergenic 45.0%
! TCGTTCTTAGTGTACCGGTG+AGG + chr7_4:1443376-1443395 None:intergenic 50.0%
! TTTTGCCTGGCCGGAAATCA+TGG - chr7_4:1444105-1444124 Msa1134790:intron 50.0%
TTTGCCTGGCCGGAAATCAT+GGG - chr7_4:1444106-1444125 Msa1134790:intron 50.0%
! CGATTGGTTCCCGAATGATG+TGG + chr7_4:1444205-1444224 None:intergenic 50.0%
TTAGGGGGAGGAAGGAAAAG+AGG - chr7_4:1444458-1444477 Msa1134790:intron 50.0%
GTGCAGGTGATTAAGGACCA+TGG - chr7_4:1444660-1444679 Msa1134790:intron 50.0%
! TAGGCCTGAGTGGACTTTAC+TGG - chr7_4:1445186-1445205 Msa1134790:CDS 50.0%
TGCTCCAAAGCAAAGACCAG+TGG + chr7_4:1445239-1445258 None:intergenic 50.0%
GGGCTCCCATGTATCATAAC+TGG + chr7_4:1445917-1445936 None:intergenic 50.0%
TGATACATGGGAGCCCATTG+AGG - chr7_4:1445921-1445940 Msa1134790:CDS 50.0%
GATACATGGGAGCCCATTGA+GGG - chr7_4:1445922-1445941 Msa1134790:CDS 50.0%
GTGGTGAGACTTACAGGAAG+AGG + chr7_4:1446132-1446151 None:intergenic 50.0%
TGAGGAGTGGTGAGACTTAC+AGG + chr7_4:1446138-1446157 None:intergenic 50.0%
CCACTAACACCTTGACAAGG+TGG + chr7_4:1446284-1446303 None:intergenic 50.0%
! CCACCTTGTCAAGGTGTTAG+TGG - chr7_4:1446281-1446300 Msa1134790:intron 50.0%
!! TTTCTGGGGCGTTATGCTGT+AGG - chr7_4:1446449-1446468 Msa1134790:intron 50.0%
TTATGCTGTAGGCCGTCTAG+TGG - chr7_4:1446460-1446479 Msa1134790:intron 50.0%
TCAAGCTCGGATGGGAATGA+TGG - chr7_4:1446493-1446512 Msa1134790:intron 50.0%
ATGATGGCTGCAGGGTCATA+TGG - chr7_4:1446509-1446528 Msa1134790:CDS 50.0%
CACGCATCCGAAATTGAGGA+AGG + chr7_4:1446535-1446554 None:intergenic 50.0%
CTCAGTAGGGATGACTGATC+TGG + chr7_4:1446733-1446752 None:intergenic 50.0%
!! TGAAAAGTGTCAGCTGGCCA+AGG - chr7_4:1446893-1446912 Msa1134790:CDS 50.0%
! CTGGCCAAGGCATTATACCT+TGG - chr7_4:1446906-1446925 Msa1134790:intron 50.0%
! GGCCAAGGCATTATACCTTG+GGG - chr7_4:1446908-1446927 Msa1134790:intron 50.0%
GTCCCCAAGGTATAATGCCT+TGG + chr7_4:1446913-1446932 None:intergenic 50.0%
GATCATCAATTGCGTCCCCA+AGG + chr7_4:1446926-1446945 None:intergenic 50.0%
! CGCAATTGATGATCTCCCAC+CGG - chr7_4:1446932-1446951 Msa1134790:intron 50.0%
GACTCTCAAAGTGCACCAAG+TGG - chr7_4:1447482-1447501 Msa1134790:intron 50.0%
CTTTAACTAGCACACCCTCG+AGG + chr7_4:1447687-1447706 None:intergenic 50.0%
! ACAGGCCATTTGGTCGACTT+TGG - chr7_4:1447981-1448000 Msa1134790:intron 50.0%
! GCCATTTGGTCGACTTTGGT+GGG - chr7_4:1447985-1448004 Msa1134790:intron 50.0%
TCCCACCAAAGTCGACCAAA+TGG + chr7_4:1447989-1448008 None:intergenic 50.0%
GAGGGTAGCATAAGTGGCAT+TGG + chr7_4:1448096-1448115 None:intergenic 50.0%
CAATGGGAGGGTAGCATAAG+TGG + chr7_4:1448102-1448121 None:intergenic 50.0%
GAACTCTGTCTTGGTCTGGA+TGG + chr7_4:1448331-1448350 None:intergenic 50.0%
CGAGAGAATGCAAGGCTACA+AGG - chr7_4:1448359-1448378 Msa1134790:intron 50.0%
TTTGTGGCCCTGTCAAACAG+AGG - chr7_4:1448402-1448421 Msa1134790:intron 50.0%
CGTTGTCAAAGGACCGTCAT+CGG + chr7_4:1449010-1449029 None:intergenic 50.0%
!! AAGGACGGGCTAGACAACTT+GGG + chr7_4:1449047-1449066 None:intergenic 50.0%
!! AAAGGACGGGCTAGACAACT+TGG + chr7_4:1449048-1449067 None:intergenic 50.0%
TCCGACGATGCATGCTTCGT+CGG - chr7_4:1443313-1443332 Msa1134790:CDS 55.0%
TCCGACGAAGCATGCATCGT+CGG + chr7_4:1443317-1443336 None:intergenic 55.0%
TTGCCTGGCCGGAAATCATG+GGG - chr7_4:1444107-1444126 Msa1134790:intron 55.0%
ACCCACCACCCCATGATTTC+CGG + chr7_4:1444118-1444137 None:intergenic 55.0%
TGACTTGAAGAGATGGGCCG+TGG - chr7_4:1445374-1445393 Msa1134790:CDS 55.0%
GGATGGGAATGATGGCTGCA+GGG - chr7_4:1446501-1446520 Msa1134790:CDS 55.0%
GCAAACTTCAGGGACCTCGA+GGG - chr7_4:1447670-1447689 Msa1134790:intron 55.0%
! GGCCATTTGGTCGACTTTGG+TGG - chr7_4:1447984-1448003 Msa1134790:intron 55.0%
CTCGGCCCTTGTTACAACAG+TGG + chr7_4:1448023-1448042 None:intergenic 55.0%
CTCTCCTAAGGGATCAGTCC+AGG - chr7_4:1448722-1448741 Msa1134790:intron 55.0%
TATCCAAGGGCAAGGGCAAC+AGG + chr7_4:1448958-1448977 None:intergenic 55.0%
GCCGGAAATCATGGGGTGGT+GGG - chr7_4:1444114-1444133 Msa1134790:intron 60.0%
GGGTGTGGAGCTATGTCCAC+TGG - chr7_4:1445220-1445239 Msa1134790:CDS 60.0%
!! TGTGGTGGGCCACCTTGTCA+AGG - chr7_4:1446272-1446291 Msa1134790:intron 60.0%
CGGATGGGAATGATGGCTGC+AGG - chr7_4:1446500-1446519 Msa1134790:CDS 60.0%
GGCAAACTTCAGGGACCTCG+AGG - chr7_4:1447669-1447688 Msa1134790:intron 60.0%
AAGGGCCGAGCCTCATAACC+AGG - chr7_4:1448033-1448052 Msa1134790:intron 60.0%
GTTCCTGTTGCCCTTGCCCT+TGG - chr7_4:1448952-1448971 Msa1134790:CDS 60.0%
CCACCCCATGATTTCCGGCC+AGG + chr7_4:1444113-1444132 None:intergenic 65.0%
CCTGGCCGGAAATCATGGGG+TGG - chr7_4:1444110-1444129 Msa1134790:intron 65.0%
GGCCGGAAATCATGGGGTGG+TGG - chr7_4:1444113-1444132 Msa1134790:intron 65.0%
GGGAGCCCATTGAGGGCTTG+AGG - chr7_4:1445929-1445948 Msa1134790:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 1442973 1449325 1442973 ID=Msa1134790;Name=Msa1134790
chr7_4 mRNA 1442973 1449325 1442973 ID=Msa1134790-mRNA-1;Parent=Msa1134790;Name=Msa1134790-mRNA-1;_AED=0.15;_eAED=0.15;_QI=187|1|1|1|1|1|20|227|827
chr7_4 exon 1442973 1443374 1442973 ID=Msa1134790-mRNA-1:exon:569;Parent=Msa1134790-mRNA-1
chr7_4 exon 1443875 1443978 1443875 ID=Msa1134790-mRNA-1:exon:568;Parent=Msa1134790-mRNA-1
chr7_4 exon 1444244 1444313 1444244 ID=Msa1134790-mRNA-1:exon:567;Parent=Msa1134790-mRNA-1
chr7_4 exon 1444405 1444448 1444405 ID=Msa1134790-mRNA-1:exon:566;Parent=Msa1134790-mRNA-1
chr7_4 exon 1444530 1444631 1444530 ID=Msa1134790-mRNA-1:exon:565;Parent=Msa1134790-mRNA-1
chr7_4 exon 1444718 1444836 1444718 ID=Msa1134790-mRNA-1:exon:564;Parent=Msa1134790-mRNA-1
chr7_4 exon 1445157 1445244 1445157 ID=Msa1134790-mRNA-1:exon:563;Parent=Msa1134790-mRNA-1
chr7_4 exon 1445345 1445431 1445345 ID=Msa1134790-mRNA-1:exon:562;Parent=Msa1134790-mRNA-1
chr7_4 exon 1445540 1445608 1445540 ID=Msa1134790-mRNA-1:exon:561;Parent=Msa1134790-mRNA-1
chr7_4 exon 1445715 1446044 1445715 ID=Msa1134790-mRNA-1:exon:560;Parent=Msa1134790-mRNA-1
chr7_4 exon 1446161 1446227 1446161 ID=Msa1134790-mRNA-1:exon:559;Parent=Msa1134790-mRNA-1
chr7_4 exon 1446348 1446406 1446348 ID=Msa1134790-mRNA-1:exon:558;Parent=Msa1134790-mRNA-1
chr7_4 exon 1446499 1446735 1446499 ID=Msa1134790-mRNA-1:exon:557;Parent=Msa1134790-mRNA-1
chr7_4 exon 1446849 1446914 1446849 ID=Msa1134790-mRNA-1:exon:556;Parent=Msa1134790-mRNA-1
chr7_4 exon 1447013 1447224 1447013 ID=Msa1134790-mRNA-1:exon:555;Parent=Msa1134790-mRNA-1
chr7_4 exon 1447329 1447419 1447329 ID=Msa1134790-mRNA-1:exon:554;Parent=Msa1134790-mRNA-1
chr7_4 exon 1447513 1447632 1447513 ID=Msa1134790-mRNA-1:exon:553;Parent=Msa1134790-mRNA-1
chr7_4 exon 1447729 1447836 1447729 ID=Msa1134790-mRNA-1:exon:552;Parent=Msa1134790-mRNA-1
chr7_4 exon 1448630 1448729 1448630 ID=Msa1134790-mRNA-1:exon:551;Parent=Msa1134790-mRNA-1
chr7_4 exon 1448903 1449325 1448903 ID=Msa1134790-mRNA-1:exon:550;Parent=Msa1134790-mRNA-1
chr7_4 five_prime_UTR 1449139 1449325 1449139 ID=Msa1134790-mRNA-1:five_prime_utr;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1448903 1449138 1448903 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1448630 1448729 1448630 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1447729 1447836 1447729 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1447513 1447632 1447513 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1447329 1447419 1447329 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1447013 1447224 1447013 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1446849 1446914 1446849 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1446499 1446735 1446499 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1446348 1446406 1446348 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1446161 1446227 1446161 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1445715 1446044 1445715 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1445540 1445608 1445540 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1445345 1445431 1445345 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1445157 1445244 1445157 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1444718 1444836 1444718 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1444530 1444631 1444530 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1444405 1444448 1444405 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1444244 1444313 1444244 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1443875 1443978 1443875 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 CDS 1443200 1443374 1443200 ID=Msa1134790-mRNA-1:cds;Parent=Msa1134790-mRNA-1
chr7_4 three_prime_UTR 1442973 1443199 1442973 ID=Msa1134790-mRNA-1:three_prime_utr;Parent=Msa1134790-mRNA-1
Gene Sequence

>Msa1134790

ATGCCTCAAAAACGCGTTCGTAAATCTTCCAAACAAGACGAAGTCGTTCCTCATTCTTCCAAACGGAAGAAAGCCAAACAATCTCCGGTTGAAGAAGAACTGGTTTCGCTTCTTCCTTCTAGAAGAAAGAAATCGAAGCAATCTTCGGTTAATTCCGACGATGCATGCTTCGTCGGAGAACTTATTCCGGCTGATGAAGCACAAAAGAAATGGCCTCACCGGTACACTAAGAACGATGAATCGAGTGAGGATGAAAGTTTGAAGGCGAAGTTTCACTATCGTGAAGCGAAGGTTGATGGGATTTTATATCAGCTGGAGGATAATGCTTTTGTCAAGGGGGAGGAAGGAAAAGAGGACTACATTGCTAAGATTGTGGAGATGTTTGAAACTCCTGATGAAGAACAATATTTTACTGCCCAATGGTTTTACAGAGCCGAAGACACGGTGATTAAGGACCATGGGAATCTAGTTGACAAAAAGAGGATTTTCATATCTGATGTAAAAGATGAAAATCCTTTAGATTGTTTAGTTAGGAAAGTTAACATTGTACAAATTTCTCCTGATGCTGCAAAAAAGAAGAAAATTCCTCCTTGTGAATTCTATTTTGACATGAAGTACACTGTGCCCTATATAACTTTCTCAAATGTTGACAATGCTGCCAAAATAGAAAGTGAGACTTCAACACTTTCAAATGAATCTGGGTCCAATGTCCATGCAGCTGATAAAAATGCGGTTAAAGGAAAATCAAGTCAAATTAAAGAATGTAATAGGCCTGAGTGGACTTTACTGGATTTGTATTCTGGGTGTGGAGCTATGTCCACTGGTCTTTGCTTTGGAGCATCTATTTCTTGCATTAAGCTTGTCACGAGATGGGCCGTGGATATAAATGAATATGCATGTGAGAGTCTCAAGCTGAATCACCCAGAAACTCACGTGAGGAATGAGCCGGCAGAAGACTTTTTAAGTCTACTGAAAGAGTGGGCTAAACTCTGTGAGAAGTTTGTACTAAATGGAGCAGAAAGTACAGATTCTGATTTGAATGCTGGTGAAGAAGCTGGTGATGAAGCTACAGATGATTCACCTGACTCTGAGGTATTTGAGGTTGAAAGACTACTCTCTATTTGCTATGGCGATCCCAACGAAGATGAAAAACCAGGACTATATTTCAGAGTGCAATGGAAGGGTTACGATTCCAGTTATGATACATGGGAGCCCATTGAGGGCTTGAGCGAGTGTAAAGATGCTATGAAAGATTTTGTTATAAATGGATATAAGGACAAGATATTGCCTCTTCCTGGCCAAGCTGATTTTATTTGTGGTGGGCCACCTTGTCAAGGTGTTAGTGGTTTCAATCGCTTCAGGAACAAAAATGCTCCATTGGAGGATGAAAAAAATCAGCAACTAATTGTTTACATGGACATCATCAATTTCTTGAAGCCTAAGTATGTTCTCATGGAGAACGTTGTTGACATTTTGAAATTTGCTGGTGGGTTTCTGGGGCGTTATGCTGTAGGCCGTCTAGTGGCCATGAATTATCAAGCTCGGATGGGAATGATGGCTGCAGGGTCATATGGCCTTCCTCAATTTCGGATGCGTGTTTTTCTTTGGGGAGCTCTAACTACTGAAAAATTACCCTCATATCCGTTACCAACTCATGAGGTTGAATCCAGATCAGTCATCCCTACTGAGTTTGAAGCAATAACAGTTGCATATTCCACTAATGAAAAGTGTCAGCTGGCCAAGGCATTATACCTTGGGGACGCAATTGATGATCTCCCACCGGTTGAAAATGATGATAGCGATGATGAAAAGAGCTACGGGACTACTCCTCGTACTGATTTTCAAAAATATATCAGATTAAAGAGAAGTGAGATGGTGAATTATTCGGCTGACTCTCAAAGTGCACCAAGTGGTATGCTGTATGATCATAGACCTTTGAAATTAAACACCGATGACTATGAGAGAGTTTGCCACATTCCAAAGGAGAAGGGGGCAAACTTCAGGGACCTCGAGGGTGTGCTAGTTAAAGAAAACAAGGTGGAATGGGACCCGTCTGTTAAAAGAGTGTATCTAAAATCTGGAAAGCCGTTGGTTCCAGATTATGCTATGACATTTGTTCACGGGACCTCCTCTAAGCCATTTGGTCGACTTTGGTGGGATGAAATTGTGTCCACTGTTGTAACAAGGGCCGAGCCTCATAACCAGGCTCTTCTCCATCCAGACCAAGACAGAGTTCTTAGCATTCGAGAGAATGCAAGGCTACAAGGATTTCCAGACTGCTATAAGCTTTGTGGCCCTGTCAAACAGAGGTACATGCAAGTTGGAAACGCAGTTGCTGTTCCTGTTGCCCTTGCCCTTGGATACACATTAGGTTTGGCAATTCTAGGACTCTCCGATGACGGTCCTTTGACAACGCTCCCCTTTAAGTACCCAAGTTGTCTAGCCCGTCCTTTAGATGTAGTTGATGATGATGGTTCAAGTTGA

Protein sequence

>Msa1134790

MPQKRVRKSSKQDEVVPHSSKRKKAKQSPVEEELVSLLPSRRKKSKQSSVNSDDACFVGELIPADEAQKKWPHRYTKNDESSEDESLKAKFHYREAKVDGILYQLEDNAFVKGEEGKEDYIAKIVEMFETPDEEQYFTAQWFYRAEDTVIKDHGNLVDKKRIFISDVKDENPLDCLVRKVNIVQISPDAAKKKKIPPCEFYFDMKYTVPYITFSNVDNAAKIESETSTLSNESGSNVHAADKNAVKGKSSQIKECNRPEWTLLDLYSGCGAMSTGLCFGASISCIKLVTRWAVDINEYACESLKLNHPETHVRNEPAEDFLSLLKEWAKLCEKFVLNGAESTDSDLNAGEEAGDEATDDSPDSEVFEVERLLSICYGDPNEDEKPGLYFRVQWKGYDSSYDTWEPIEGLSECKDAMKDFVINGYKDKILPLPGQADFICGGPPCQGVSGFNRFRNKNAPLEDEKNQQLIVYMDIINFLKPKYVLMENVVDILKFAGGFLGRYAVGRLVAMNYQARMGMMAAGSYGLPQFRMRVFLWGALTTEKLPSYPLPTHEVESRSVIPTEFEAITVAYSTNEKCQLAKALYLGDAIDDLPPVENDDSDDEKSYGTTPRTDFQKYIRLKRSEMVNYSADSQSAPSGMLYDHRPLKLNTDDYERVCHIPKEKGANFRDLEGVLVKENKVEWDPSVKRVYLKSGKPLVPDYAMTFVHGTSSKPFGRLWWDEIVSTVVTRAEPHNQALLHPDQDRVLSIRENARLQGFPDCYKLCGPVKQRYMQVGNAVAVPVALALGYTLGLAILGLSDDGPLTTLPFKYPSCLARPLDVVDDDGSS*