AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1008680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1008680 MtrunA17_Chr5g0410931 71.271 181 0 2 1 175 1 135 1.52e-79 232
Msa1008680 MtrunA17_Chr5g0410951 71.271 181 0 2 1 175 1 135 1.52e-79 232
Msa1008680 MtrunA17_Chr8g0383851 71.271 181 0 2 1 175 1 135 1.52e-79 232
Msa1008680 MtrunA17_Chr8g0383781 71.271 181 0 2 1 175 1 135 1.52e-79 232
Msa1008680 MtrunA17_Chr8g0390361 71.271 181 0 2 1 175 1 135 1.52e-79 232
Msa1008680 MtrunA17_Chr2g0295191 71.271 181 0 2 1 175 1 135 1.52e-79 232
Msa1008680 MtrunA17_Chr7g0237661 71.271 181 0 2 1 175 1 135 1.52e-79 232
Msa1008680 MtrunA17_Chr4g0033041 71.271 181 0 2 1 175 1 135 1.52e-79 232
Msa1008680 MtrunA17_Chr7g0218971 71.271 181 0 2 1 175 1 135 1.52e-79 232
Msa1008680 MtrunA17_Chr4g0046301 71.271 181 0 2 1 175 1 135 1.52e-79 232
Msa1008680 MtrunA17_Chr8g0364801 71.271 181 0 2 1 175 1 135 1.52e-79 232
Msa1008680 MtrunA17_Chr4g0054151 69.061 181 4 2 1 175 4 138 2.10e-76 224
Msa1008680 MtrunA17_Chr4g0054161 69.061 181 4 2 1 175 1 135 2.29e-76 224
Msa1008680 MtrunA17_Chr8g0363741 69.061 181 4 2 1 175 1 135 2.29e-76 224
Msa1008680 MtrunA17_Chr1g0156021 69.061 181 4 2 1 175 1 135 2.29e-76 224
Msa1008680 MtrunA17_Chr8g0388121 68.508 181 5 2 1 175 1 135 8.09e-76 223
Msa1008680 MtrunA17_Chr2g0319141 63.536 181 14 2 1 175 1 135 1.12e-69 207
Msa1008680 MtrunA17_Chr2g0319151 63.536 181 14 2 1 175 1 135 1.12e-69 207
Msa1008680 MtrunA17_Chr2g0319131 61.780 191 11 3 1 175 1 145 1.22e-65 197
Msa1008680 MtrunA17_Chr2g0319121 60.440 182 18 3 1 175 1 135 7.53e-61 185
Msa1008680 MtrunA17_Chr7g0218961 57.962 157 14 2 25 175 2 112 1.35e-49 155
Msa1008680 MtrunA17_Chr5g0407311 68.421 114 31 2 1 110 1 113 6.70e-44 141
Msa1008680 MtrunA17_Chr7g0222991 47.253 182 43 3 1 176 10 144 1.98e-40 133
Msa1008680 MtrunA17_Chr7g0240791 100.000 66 0 0 1 66 1 66 2.45e-40 134
Msa1008680 MtrunA17_Chr7g0223001 40.884 181 41 5 3 176 27 148 6.59e-28 102
Msa1008680 MtrunA17_Chr8g0347231 53.012 83 30 2 37 111 28 109 6.07e-18 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1008680 AT1G09200.1 70.718 181 1 2 1 175 1 135 8.53e-79 231
Msa1008680 AT5G65360.1 70.718 181 1 2 1 175 1 135 8.53e-79 231
Msa1008680 AT5G10390.1 70.718 181 1 2 1 175 1 135 8.53e-79 231
Msa1008680 AT5G10400.1 70.718 181 1 2 1 175 1 135 8.53e-79 231
Msa1008680 AT3G27360.1 70.718 181 1 2 1 175 1 135 8.53e-79 231
Msa1008680 AT4G40030.3 69.061 181 4 2 1 175 1 135 3.17e-76 224
Msa1008680 AT4G40030.1 69.061 181 4 2 1 175 1 135 3.17e-76 224
Msa1008680 AT4G40030.4 69.061 181 4 2 1 175 1 135 3.17e-76 224
Msa1008680 AT5G10980.1 69.061 181 4 2 1 175 1 135 3.17e-76 224
Msa1008680 AT4G40040.2 69.061 181 4 2 1 175 1 135 3.17e-76 224
Msa1008680 AT4G40040.3 69.061 181 4 2 1 175 1 135 3.17e-76 224
Msa1008680 AT4G40040.1 69.061 181 4 2 1 175 1 135 3.17e-76 224
Msa1008680 AT4G40030.2 69.061 181 4 2 1 175 29 163 6.58e-76 224
Msa1008680 AT5G65350.1 67.403 181 7 2 1 175 1 135 2.48e-74 219
Msa1008680 AT1G75600.1 66.298 181 9 2 1 175 1 135 1.58e-72 215
Msa1008680 AT1G13370.1 66.298 181 9 2 1 175 1 135 5.32e-72 213
Msa1008680 AT1G19890.1 63.736 182 13 3 1 175 1 136 8.12e-67 200
Msa1008680 AT5G12910.1 50.276 181 33 4 1 175 1 130 9.47e-51 159
Msa1008680 AT1G01370.2 51.042 96 38 2 24 111 63 157 3.68e-20 83.2
Msa1008680 AT1G01370.1 51.042 96 38 2 24 111 63 157 3.68e-20 83.2
Msa1008680 AT1G01370.4 51.042 96 38 2 24 111 63 157 3.68e-20 83.2
Msa1008680 AT1G01370.3 51.042 96 38 2 24 111 63 157 3.68e-20 83.2

Find 39 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGCGCAATGCGACGGTTCC+TGG 0.246474 7_1:+9234732 None:intergenic
CGATTTCACGAACCAATCTT+TGG 0.247437 7_1:+9234658 None:intergenic
TTCTTCACTCCTCCGGTTGC+CGG 0.280449 7_1:+9234771 None:intergenic
TTGAATATCCTTAGGCATAA+TGG 0.349539 7_1:+9231870 None:intergenic
GAAACTTCCATTCCAAAGAT+TGG 0.376853 7_1:-9234670 Msa1008680:intron
GTTGCTAAAGCCTATCTTGT+TGG 0.395503 7_1:-9231934 Msa1008680:CDS
GCTGCTGAAGCGTATCTTGT+TGG 0.411498 7_1:-9234576 Msa1008680:CDS
AGAGCACTGGGCTTCTCATT+AGG 0.411531 7_1:-9232043 Msa1008680:CDS
AGAAAATCTGCTCCGGCAAC+CGG 0.415677 7_1:-9234783 Msa1008680:CDS
AGAGCACCGAGCTTCTCATT+AGG 0.438663 7_1:-9234692 Msa1008680:CDS
TGATCTCACGAACCAGCCTT+TGG 0.441043 7_1:+9232009 None:intergenic
TGGTGGCGAGTTGTTTCCGT+GGG 0.469293 7_1:+9234814 None:intergenic
GTGTGGCTTCTTCACTCCTC+CGG 0.469362 7_1:+9234764 None:intergenic
GAAGCTTCCTTTCCAAAGGC+TGG 0.477523 7_1:-9232021 Msa1008680:intron
TTCAAACAAACCAACAAGAT+AGG 0.477570 7_1:+9231924 None:intergenic
AGAAAGTATCAGAAGAGCAC+TGG 0.495811 7_1:-9232056 Msa1008680:intron
CGAGCAAGTTGAATATCCTT+AGG 0.499677 7_1:+9231862 None:intergenic
TAGAGTTACCATTATGCCTA+AGG 0.507455 7_1:-9231878 Msa1008680:CDS
TCTGATTTCGCGCAATGCGA+CGG 0.516040 7_1:+9234725 None:intergenic
CATAATGGTAACTCTATGAA+TGG 0.523318 7_1:+9231885 None:intergenic
TCACGAACCAATCTTTGGAA+TGG 0.535409 7_1:+9234663 None:intergenic
AGCAGCAAGAAAATCTGCTC+CGG 0.540890 7_1:-9234790 Msa1008680:CDS
TTAGGAAGCTTCCTTTCCAA+AGG 0.544318 7_1:-9232025 Msa1008680:CDS
TCGCAGAATCAGAGGCGAAA+GGG 0.547081 7_1:-9231842 Msa1008680:CDS
CTCGCAGAATCAGAGGCGAA+AGG 0.582510 7_1:-9231843 Msa1008680:CDS
CAACTTGCTCGCAGAATCAG+AGG 0.592233 7_1:-9231850 Msa1008680:CDS
TTTAGCAACTTCTTGAAGAG+CGG 0.592834 7_1:+9231948 None:intergenic
TCACGAACCAGCCTTTGGAA+AGG 0.611541 7_1:+9232014 None:intergenic
TTGGTGGCGAGTTGTTTCCG+TGG 0.614040 7_1:+9234813 None:intergenic
GAAAGTATCAGAAGAGCACT+GGG 0.615807 7_1:-9232055 Msa1008680:intron
CAAACAGCAAGAAAATCCAC+CGG 0.620184 7_1:-9234846 Msa1008680:CDS
AAATCTGCTCCGGCAACCGG+AGG 0.626118 7_1:-9234780 Msa1008680:CDS
AAGTTTCCTAATGAGAAGCT+CGG 0.631897 7_1:+9234686 None:intergenic
CCACCGGAGGAAAAGCCCCA+CGG 0.631926 7_1:-9234830 Msa1008680:CDS
AAGCCACACAGATTCCGTCC+AGG 0.632383 7_1:-9234750 Msa1008680:CDS
GCAATGCGACGGTTCCTGGA+CGG 0.638461 7_1:+9234736 None:intergenic
GTTCCTGGACGGAATCTGTG+TGG 0.669194 7_1:+9234747 None:intergenic
ACAGCAAGAAAATCCACCGG+AGG 0.684797 7_1:-9234843 Msa1008680:CDS
GGTGGCGAGTTGTTTCCGTG+GGG 0.739791 7_1:+9234815 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTAAATATTTTTTTA+AGG + chr7_1:9233835-9233854 None:intergenic 0.0%
!!! AAATATTAAATATTTTTTTA+AGG + chr7_1:9233835-9233854 None:intergenic 0.0%
!!! TTCAATTTTAAAATCAAAAT+TGG - chr7_1:9232523-9232542 Msa1008680:intron 10.0%
!!! TTCAATTTTAAAATCAAAAT+TGG - chr7_1:9232523-9232542 Msa1008680:intron 10.0%
!!! TCTTTAGATGTTTTATAATT+AGG - chr7_1:9232275-9232294 Msa1008680:intron 15.0%
!!! CTTTAGATGTTTTATAATTA+GGG - chr7_1:9232276-9232295 Msa1008680:intron 15.0%
!!! TCTACAGTTTAATTTAATTT+TGG - chr7_1:9232620-9232639 Msa1008680:intron 15.0%
!!! TCAATATGTTTAATTTTAAC+TGG + chr7_1:9233134-9233153 None:intergenic 15.0%
!! AAAATTAAACATATTGAGTT+TGG - chr7_1:9233137-9233156 Msa1008680:intron 15.0%
!! TTAATATATTATGACAATCT+TGG - chr7_1:9233559-9233578 Msa1008680:intron 15.0%
!! CTTTATGATGTAAAATATTA+AGG + chr7_1:9234234-9234253 None:intergenic 15.0%
!!! CTTAATATTTTACATCATAA+AGG - chr7_1:9234232-9234251 Msa1008680:intron 15.0%
!!! TCTTTAGATGTTTTATAATT+AGG - chr7_1:9232275-9232294 Msa1008680:intron 15.0%
!!! CTTTAGATGTTTTATAATTA+GGG - chr7_1:9232276-9232295 Msa1008680:intron 15.0%
!!! TCTACAGTTTAATTTAATTT+TGG - chr7_1:9232620-9232639 Msa1008680:intron 15.0%
!!! TCAATATGTTTAATTTTAAC+TGG + chr7_1:9233134-9233153 None:intergenic 15.0%
!! AAAATTAAACATATTGAGTT+TGG - chr7_1:9233137-9233156 Msa1008680:intron 15.0%
!! TTAATATATTATGACAATCT+TGG - chr7_1:9233559-9233578 Msa1008680:intron 15.0%
!! CTTTATGATGTAAAATATTA+AGG + chr7_1:9234234-9234253 None:intergenic 15.0%
!!! CTTAATATTTTACATCATAA+AGG - chr7_1:9234232-9234251 Msa1008680:intron 15.0%
!! AACAAAATTGAAAATTAGTG+TGG + chr7_1:9232461-9232480 None:intergenic 20.0%
!! TTAATTGTTTGGTTGAAATA+GGG - chr7_1:9232564-9232583 Msa1008680:intron 20.0%
!!! TCTTAGAACTTTTTATGATT+GGG - chr7_1:9232978-9232997 Msa1008680:intron 20.0%
!! AAACCATATTAATCACATTA+AGG + chr7_1:9233044-9233063 None:intergenic 20.0%
!! TTATTCTTCAATTTAATCCT+TGG - chr7_1:9233191-9233210 Msa1008680:intron 20.0%
!! TAAATGTAAAATGACGTAAA+AGG - chr7_1:9233762-9233781 Msa1008680:intron 20.0%
!!! TCTTTTTAATTTCTGCAAAT+TGG + chr7_1:9233882-9233901 None:intergenic 20.0%
!! TACCAAAAGAAATATCAAAT+TGG - chr7_1:9233977-9233996 Msa1008680:intron 20.0%
!!! ATCCAATTTGATATTTCTTT+TGG + chr7_1:9233982-9234001 None:intergenic 20.0%
!!! TTATTTTTTAAGGAAACCAT+TGG + chr7_1:9234149-9234168 None:intergenic 20.0%
!! AACAAATAAAATCAATCCAA+TGG - chr7_1:9234168-9234187 Msa1008680:intron 20.0%
!! GATGTAAAATATTAAGGAAA+CGG + chr7_1:9234228-9234247 None:intergenic 20.0%
!! GATTGTACATTAAATAACAA+GGG - chr7_1:9234264-9234283 Msa1008680:intron 20.0%
!! TTAAATAACAAGGGTAAAAA+TGG - chr7_1:9234273-9234292 Msa1008680:intron 20.0%
!! AACAAAATTGAAAATTAGTG+TGG + chr7_1:9232461-9232480 None:intergenic 20.0%
!! TTAATTGTTTGGTTGAAATA+GGG - chr7_1:9232564-9232583 Msa1008680:intron 20.0%
!!! TCTTAGAACTTTTTATGATT+GGG - chr7_1:9232978-9232997 Msa1008680:intron 20.0%
!! AAACCATATTAATCACATTA+AGG + chr7_1:9233044-9233063 None:intergenic 20.0%
!! TTATTCTTCAATTTAATCCT+TGG - chr7_1:9233191-9233210 Msa1008680:intron 20.0%
!! TAAATGTAAAATGACGTAAA+AGG - chr7_1:9233762-9233781 Msa1008680:intron 20.0%
!!! TCTTTTTAATTTCTGCAAAT+TGG + chr7_1:9233882-9233901 None:intergenic 20.0%
!! TACCAAAAGAAATATCAAAT+TGG - chr7_1:9233977-9233996 Msa1008680:intron 20.0%
!!! ATCCAATTTGATATTTCTTT+TGG + chr7_1:9233982-9234001 None:intergenic 20.0%
!!! TTATTTTTTAAGGAAACCAT+TGG + chr7_1:9234149-9234168 None:intergenic 20.0%
!! AACAAATAAAATCAATCCAA+TGG - chr7_1:9234168-9234187 Msa1008680:intron 20.0%
!! GATGTAAAATATTAAGGAAA+CGG + chr7_1:9234228-9234247 None:intergenic 20.0%
!! GATTGTACATTAAATAACAA+GGG - chr7_1:9234264-9234283 Msa1008680:intron 20.0%
!! TTAAATAACAAGGGTAAAAA+TGG - chr7_1:9234273-9234292 Msa1008680:intron 20.0%
!! TTGCTTTAATTTCTCTGTTA+GGG - chr7_1:9232354-9232373 Msa1008680:intron 25.0%
!! TTTAAAATCAAAATTGGCCA+TGG - chr7_1:9232529-9232548 Msa1008680:intron 25.0%
! GTTAATTGTTTGGTTGAAAT+AGG - chr7_1:9232563-9232582 Msa1008680:intron 25.0%
!!! TTTAATTTTGGTTAGTAACG+TGG - chr7_1:9232632-9232651 Msa1008680:intron 25.0%
!!! TTAATTTTGGTTAGTAACGT+GGG - chr7_1:9232633-9232652 Msa1008680:intron 25.0%
! ACATAATTAGAGAAAAGTCT+CGG - chr7_1:9232757-9232776 Msa1008680:intron 25.0%
! CATCTATTCATATAGGAATT+TGG + chr7_1:9232818-9232837 None:intergenic 25.0%
! CTTAACACATCTATTCATAT+AGG + chr7_1:9232825-9232844 None:intergenic 25.0%
!! CAATGCTTTAAACCTTATTA+GGG - chr7_1:9232869-9232888 Msa1008680:intron 25.0%
!! GTCTTAGAACTTTTTATGAT+TGG - chr7_1:9232977-9232996 Msa1008680:intron 25.0%
!! CTTAGAACTTTTTATGATTG+GGG - chr7_1:9232979-9232998 Msa1008680:intron 25.0%
! CATATTAATCACATTAAGGA+TGG + chr7_1:9233040-9233059 None:intergenic 25.0%
! CATCCTTAATGTGATTAATA+TGG - chr7_1:9233038-9233057 Msa1008680:intron 25.0%
! TTAATATGGTTTGATACTGT+AGG - chr7_1:9233052-9233071 Msa1008680:intron 25.0%
!!! CATAATTCATTTTGATGGTA+AGG + chr7_1:9233535-9233554 None:intergenic 25.0%
! CTTACCATCAAAATGAATTA+TGG - chr7_1:9233533-9233552 Msa1008680:intron 25.0%
!! ACATCCATAATTCATTTTGA+TGG + chr7_1:9233540-9233559 None:intergenic 25.0%
!! AGTTACTTTAAACTTCTGTT+TGG - chr7_1:9233585-9233604 Msa1008680:intron 25.0%
!! TATAAGCTAATTGAAGTGTT+TGG - chr7_1:9233715-9233734 Msa1008680:intron 25.0%
!! AAAATTTTGTAGCATCATGA+GGG - chr7_1:9233901-9233920 Msa1008680:intron 25.0%
! ATTTGTGTTATCGAAAGAAT+TGG - chr7_1:9233949-9233968 Msa1008680:intron 25.0%
! AAGAAATATCAAATTGGATC+TGG - chr7_1:9233983-9234002 Msa1008680:intron 25.0%
! AGAAATATCAAATTGGATCT+GGG - chr7_1:9233984-9234003 Msa1008680:intron 25.0%
!!! TCCAATTCGATTATTTCTTT+TGG + chr7_1:9234100-9234119 None:intergenic 25.0%
! CATAAATAATTCCAATCCAA+TGG - chr7_1:9234130-9234149 Msa1008680:intron 25.0%
! AATCAATCCAATGGTTAATA+TGG - chr7_1:9234177-9234196 Msa1008680:intron 25.0%
! TACATCATAAAGGATAAACT+TGG - chr7_1:9234242-9234261 Msa1008680:intron 25.0%
! GGATTGTACATTAAATAACA+AGG - chr7_1:9234263-9234282 Msa1008680:intron 25.0%
!! AAGTGATTAACTTGAAATCT+GGG + chr7_1:9234593-9234612 None:intergenic 25.0%
!! AAAGTGATTAACTTGAAATC+TGG + chr7_1:9234594-9234613 None:intergenic 25.0%
!! TTGCTTTAATTTCTCTGTTA+GGG - chr7_1:9232354-9232373 Msa1008680:intron 25.0%
!! TTTAAAATCAAAATTGGCCA+TGG - chr7_1:9232529-9232548 Msa1008680:intron 25.0%
! GTTAATTGTTTGGTTGAAAT+AGG - chr7_1:9232563-9232582 Msa1008680:intron 25.0%
!!! TTTAATTTTGGTTAGTAACG+TGG - chr7_1:9232632-9232651 Msa1008680:intron 25.0%
!!! TTAATTTTGGTTAGTAACGT+GGG - chr7_1:9232633-9232652 Msa1008680:intron 25.0%
! ACATAATTAGAGAAAAGTCT+CGG - chr7_1:9232757-9232776 Msa1008680:intron 25.0%
! CATCTATTCATATAGGAATT+TGG + chr7_1:9232818-9232837 None:intergenic 25.0%
! CTTAACACATCTATTCATAT+AGG + chr7_1:9232825-9232844 None:intergenic 25.0%
!! CAATGCTTTAAACCTTATTA+GGG - chr7_1:9232869-9232888 Msa1008680:intron 25.0%
!! GTCTTAGAACTTTTTATGAT+TGG - chr7_1:9232977-9232996 Msa1008680:intron 25.0%
!! CTTAGAACTTTTTATGATTG+GGG - chr7_1:9232979-9232998 Msa1008680:intron 25.0%
! CATATTAATCACATTAAGGA+TGG + chr7_1:9233040-9233059 None:intergenic 25.0%
! CATCCTTAATGTGATTAATA+TGG - chr7_1:9233038-9233057 Msa1008680:intron 25.0%
! TTAATATGGTTTGATACTGT+AGG - chr7_1:9233052-9233071 Msa1008680:intron 25.0%
!!! CATAATTCATTTTGATGGTA+AGG + chr7_1:9233535-9233554 None:intergenic 25.0%
! CTTACCATCAAAATGAATTA+TGG - chr7_1:9233533-9233552 Msa1008680:intron 25.0%
!! ACATCCATAATTCATTTTGA+TGG + chr7_1:9233540-9233559 None:intergenic 25.0%
!! AGTTACTTTAAACTTCTGTT+TGG - chr7_1:9233585-9233604 Msa1008680:intron 25.0%
!! TATAAGCTAATTGAAGTGTT+TGG - chr7_1:9233715-9233734 Msa1008680:intron 25.0%
!! AAAATTTTGTAGCATCATGA+GGG - chr7_1:9233901-9233920 Msa1008680:intron 25.0%
! ATTTGTGTTATCGAAAGAAT+TGG - chr7_1:9233949-9233968 Msa1008680:intron 25.0%
! AAGAAATATCAAATTGGATC+TGG - chr7_1:9233983-9234002 Msa1008680:intron 25.0%
! AGAAATATCAAATTGGATCT+GGG - chr7_1:9233984-9234003 Msa1008680:intron 25.0%
!!! TCCAATTCGATTATTTCTTT+TGG + chr7_1:9234100-9234119 None:intergenic 25.0%
! CATAAATAATTCCAATCCAA+TGG - chr7_1:9234130-9234149 Msa1008680:intron 25.0%
! AATCAATCCAATGGTTAATA+TGG - chr7_1:9234177-9234196 Msa1008680:intron 25.0%
! TACATCATAAAGGATAAACT+TGG - chr7_1:9234242-9234261 Msa1008680:intron 25.0%
! GGATTGTACATTAAATAACA+AGG - chr7_1:9234263-9234282 Msa1008680:intron 25.0%
!! AAGTGATTAACTTGAAATCT+GGG + chr7_1:9234593-9234612 None:intergenic 25.0%
!! AAAGTGATTAACTTGAAATC+TGG + chr7_1:9234594-9234613 None:intergenic 25.0%
GAGCTTAGAAGATTTGATTA+TGG - chr7_1:9232240-9232259 Msa1008680:intron 30.0%
! TAGAGTTTAACTTCTCTGTT+AGG - chr7_1:9232313-9232332 Msa1008680:intron 30.0%
! CTTGCTTTAATTTCTCTGTT+AGG - chr7_1:9232353-9232372 Msa1008680:intron 30.0%
TATAGGCAGTGTTAATTGTT+TGG - chr7_1:9232553-9232572 Msa1008680:intron 30.0%
AAACAATTCAGAAGATTAGC+AGG + chr7_1:9232713-9232732 None:intergenic 30.0%
TGCTAATCTTCTGAATTGTT+TGG - chr7_1:9232712-9232731 Msa1008680:intron 30.0%
CATAATTAGAGAAAAGTCTC+GGG - chr7_1:9232758-9232777 Msa1008680:intron 30.0%
ATAATTAGAGAAAAGTCTCG+GGG - chr7_1:9232759-9232778 Msa1008680:intron 30.0%
CTATTCATATAGGAATTTGG+CGG + chr7_1:9232815-9232834 None:intergenic 30.0%
! CCTAATAAGGTTTAAAGCAT+TGG + chr7_1:9232871-9232890 None:intergenic 30.0%
! CCAATGCTTTAAACCTTATT+AGG - chr7_1:9232868-9232887 Msa1008680:intron 30.0%
!! ATTCAAAAAGTGCCCTAATA+AGG + chr7_1:9232884-9232903 None:intergenic 30.0%
!! TATTAGGGCACTTTTTGAAT+TGG - chr7_1:9232884-9232903 Msa1008680:intron 30.0%
! TCAATGTTGTGATGTGATTT+TGG - chr7_1:9233011-9233030 Msa1008680:intron 30.0%
GTAACACTTAATTCTCTAGA+TGG - chr7_1:9233074-9233093 Msa1008680:intron 30.0%
!! TTTCTACGATCCTTTAAAGT+TGG + chr7_1:9233224-9233243 None:intergenic 30.0%
! ATTCTCGATAGCTTTTGTAT+AGG - chr7_1:9233297-9233316 Msa1008680:intron 30.0%
! TTCTCGATAGCTTTTGTATA+GGG - chr7_1:9233298-9233317 Msa1008680:intron 30.0%
GATAGTAAGCACTAGAATAT+AGG + chr7_1:9233505-9233524 None:intergenic 30.0%
CTTCTGTTTGGTAAAAATAG+CGG - chr7_1:9233597-9233616 Msa1008680:intron 30.0%
! TGAAGTGTTTGGTAAATTAG+CGG - chr7_1:9233726-9233745 Msa1008680:intron 30.0%
! GAAAATTTTGTAGCATCATG+AGG - chr7_1:9233900-9233919 Msa1008680:intron 30.0%
!! TTGGCTTGTGTAAAATATAG+TGG - chr7_1:9234030-9234049 Msa1008680:intron 30.0%
ATGTGTGTTATCGAAAGAAT+TGG - chr7_1:9234067-9234086 Msa1008680:intron 30.0%
GCCAAAAGAAATAATCGAAT+TGG - chr7_1:9234096-9234115 Msa1008680:intron 30.0%
!! TTTTAAGGAAACCATTGGAT+TGG + chr7_1:9234144-9234163 None:intergenic 30.0%
AAATATTAAGGAAACGGATC+TGG + chr7_1:9234222-9234241 None:intergenic 30.0%
TGAAATAAGCTATAAGCTCA+TGG - chr7_1:9234373-9234392 Msa1008680:intron 30.0%
TTGACAAAAAAAGCTCTGTT+TGG + chr7_1:9234412-9234431 None:intergenic 30.0%
TTCAAACAAACCAACAAGAT+AGG + chr7_1:9232135-9232154 None:intergenic 30.0%
CATAATGGTAACTCTATGAA+TGG + chr7_1:9234816-9234835 None:intergenic 30.0%
TTGAATATCCTTAGGCATAA+TGG + chr7_1:9232195-9232214 None:intergenic 30.0%
GAGCTTAGAAGATTTGATTA+TGG - chr7_1:9232240-9232259 Msa1008680:intron 30.0%
! TAGAGTTTAACTTCTCTGTT+AGG - chr7_1:9232313-9232332 Msa1008680:intron 30.0%
! CTTGCTTTAATTTCTCTGTT+AGG - chr7_1:9232353-9232372 Msa1008680:intron 30.0%
TATAGGCAGTGTTAATTGTT+TGG - chr7_1:9232553-9232572 Msa1008680:intron 30.0%
AAACAATTCAGAAGATTAGC+AGG + chr7_1:9232713-9232732 None:intergenic 30.0%
TGCTAATCTTCTGAATTGTT+TGG - chr7_1:9232712-9232731 Msa1008680:intron 30.0%
CATAATTAGAGAAAAGTCTC+GGG - chr7_1:9232758-9232777 Msa1008680:intron 30.0%
ATAATTAGAGAAAAGTCTCG+GGG - chr7_1:9232759-9232778 Msa1008680:intron 30.0%
CTATTCATATAGGAATTTGG+CGG + chr7_1:9232815-9232834 None:intergenic 30.0%
! CCTAATAAGGTTTAAAGCAT+TGG + chr7_1:9232871-9232890 None:intergenic 30.0%
! CCAATGCTTTAAACCTTATT+AGG - chr7_1:9232868-9232887 Msa1008680:intron 30.0%
!! ATTCAAAAAGTGCCCTAATA+AGG + chr7_1:9232884-9232903 None:intergenic 30.0%
!! TATTAGGGCACTTTTTGAAT+TGG - chr7_1:9232884-9232903 Msa1008680:intron 30.0%
! TCAATGTTGTGATGTGATTT+TGG - chr7_1:9233011-9233030 Msa1008680:intron 30.0%
GTAACACTTAATTCTCTAGA+TGG - chr7_1:9233074-9233093 Msa1008680:intron 30.0%
!! TTTCTACGATCCTTTAAAGT+TGG + chr7_1:9233224-9233243 None:intergenic 30.0%
! ATTCTCGATAGCTTTTGTAT+AGG - chr7_1:9233297-9233316 Msa1008680:intron 30.0%
! TTCTCGATAGCTTTTGTATA+GGG - chr7_1:9233298-9233317 Msa1008680:intron 30.0%
GATAGTAAGCACTAGAATAT+AGG + chr7_1:9233505-9233524 None:intergenic 30.0%
CTTCTGTTTGGTAAAAATAG+CGG - chr7_1:9233597-9233616 Msa1008680:intron 30.0%
! TGAAGTGTTTGGTAAATTAG+CGG - chr7_1:9233726-9233745 Msa1008680:intron 30.0%
! GAAAATTTTGTAGCATCATG+AGG - chr7_1:9233900-9233919 Msa1008680:intron 30.0%
!! TTGGCTTGTGTAAAATATAG+TGG - chr7_1:9234030-9234049 Msa1008680:intron 30.0%
ATGTGTGTTATCGAAAGAAT+TGG - chr7_1:9234067-9234086 Msa1008680:intron 30.0%
GCCAAAAGAAATAATCGAAT+TGG - chr7_1:9234096-9234115 Msa1008680:intron 30.0%
!! TTTTAAGGAAACCATTGGAT+TGG + chr7_1:9234144-9234163 None:intergenic 30.0%
AAATATTAAGGAAACGGATC+TGG + chr7_1:9234222-9234241 None:intergenic 30.0%
TGAAATAAGCTATAAGCTCA+TGG - chr7_1:9234373-9234392 Msa1008680:intron 30.0%
TTGACAAAAAAAGCTCTGTT+TGG + chr7_1:9234412-9234431 None:intergenic 30.0%
TTCAAACAAACCAACAAGAT+AGG + chr7_1:9232135-9232154 None:intergenic 30.0%
CATAATGGTAACTCTATGAA+TGG + chr7_1:9234816-9234835 None:intergenic 30.0%
TTGAATATCCTTAGGCATAA+TGG + chr7_1:9232195-9232214 None:intergenic 30.0%
!!! GGATTTTCTTGCTGTTTGTT+TGG + chr7_1:9231850-9231869 None:intergenic 35.0%
AAGTTTCCTAATGAGAAGCT+CGG + chr7_1:9232015-9232034 None:intergenic 35.0%
GAAACTTCCATTCCAAAGAT+TGG - chr7_1:9232028-9232047 Msa1008680:CDS 35.0%
GAGAGTTACTATTATGCCTA+AGG - chr7_1:9232184-9232203 Msa1008680:intron 35.0%
! CTTGCAAGTTGAATATCCTT+AGG + chr7_1:9232203-9232222 None:intergenic 35.0%
TCAAAATTGGCCATGGTTAT+AGG - chr7_1:9232536-9232555 Msa1008680:intron 35.0%
ATTAACACTGCCTATAACCA+TGG + chr7_1:9232549-9232568 None:intergenic 35.0%
TAATTAGAGAAAAGTCTCGG+GGG - chr7_1:9232760-9232779 Msa1008680:intron 35.0%
! CTTTTTGAATTGGATGCTTG+TGG - chr7_1:9232894-9232913 Msa1008680:intron 35.0%
!! GTATCATTTGGCATTGGTAA+TGG - chr7_1:9232935-9232954 Msa1008680:intron 35.0%
! GAACTTTTTATGATTGGGGT+TGG - chr7_1:9232983-9233002 Msa1008680:intron 35.0%
AATCACATCACAACATTGAG+AGG + chr7_1:9233010-9233029 None:intergenic 35.0%
AAGCTGCAAGATCTATTGTT+TGG + chr7_1:9233173-9233192 None:intergenic 35.0%
! ATAGCTTTTGTATAGGGTAG+AGG - chr7_1:9233304-9233323 Msa1008680:intron 35.0%
AGGCAATTCTCAAGACATAA+TGG - chr7_1:9233324-9233343 Msa1008680:intron 35.0%
GGATATTAATTCGTACGTGT+GGG + chr7_1:9233861-9233880 None:intergenic 35.0%
TGGATATTAATTCGTACGTG+TGG + chr7_1:9233862-9233881 None:intergenic 35.0%
GTGTTATCGAAAGAATTGGA+AGG - chr7_1:9233953-9233972 Msa1008680:intron 35.0%
TAATCGAATTGGAACACAAG+TGG - chr7_1:9234107-9234126 Msa1008680:intron 35.0%
CAATCCAATGGTTAATATGG+CGG - chr7_1:9234180-9234199 Msa1008680:intron 35.0%
AGTCTCTATATCTGCGTATA+AGG - chr7_1:9234482-9234501 Msa1008680:intron 35.0%
ATAAGGTTCTGCACTCATTA+TGG - chr7_1:9234499-9234518 Msa1008680:intron 35.0%
!! CAGTTTTGATAGTCGATTCT+GGG + chr7_1:9234560-9234579 None:intergenic 35.0%
!! ACAGTTTTGATAGTCGATTC+TGG + chr7_1:9234561-9234580 None:intergenic 35.0%
TTTAGCAACTTCTTGAAGAG+CGG + chr7_1:9234753-9234772 None:intergenic 35.0%
TAGAGTTACCATTATGCCTA+AGG - chr7_1:9234820-9234839 Msa1008680:CDS 35.0%
!!! GGATTTTCTTGCTGTTTGTT+TGG + chr7_1:9231850-9231869 None:intergenic 35.0%
AAGTTTCCTAATGAGAAGCT+CGG + chr7_1:9232015-9232034 None:intergenic 35.0%
GAAACTTCCATTCCAAAGAT+TGG - chr7_1:9232028-9232047 Msa1008680:CDS 35.0%
GAGAGTTACTATTATGCCTA+AGG - chr7_1:9232184-9232203 Msa1008680:intron 35.0%
! CTTGCAAGTTGAATATCCTT+AGG + chr7_1:9232203-9232222 None:intergenic 35.0%
TCAAAATTGGCCATGGTTAT+AGG - chr7_1:9232536-9232555 Msa1008680:intron 35.0%
ATTAACACTGCCTATAACCA+TGG + chr7_1:9232549-9232568 None:intergenic 35.0%
TAATTAGAGAAAAGTCTCGG+GGG - chr7_1:9232760-9232779 Msa1008680:intron 35.0%
! CTTTTTGAATTGGATGCTTG+TGG - chr7_1:9232894-9232913 Msa1008680:intron 35.0%
!! GTATCATTTGGCATTGGTAA+TGG - chr7_1:9232935-9232954 Msa1008680:intron 35.0%
! GAACTTTTTATGATTGGGGT+TGG - chr7_1:9232983-9233002 Msa1008680:intron 35.0%
AATCACATCACAACATTGAG+AGG + chr7_1:9233010-9233029 None:intergenic 35.0%
AAGCTGCAAGATCTATTGTT+TGG + chr7_1:9233173-9233192 None:intergenic 35.0%
! ATAGCTTTTGTATAGGGTAG+AGG - chr7_1:9233304-9233323 Msa1008680:intron 35.0%
AGGCAATTCTCAAGACATAA+TGG - chr7_1:9233324-9233343 Msa1008680:intron 35.0%
GGATATTAATTCGTACGTGT+GGG + chr7_1:9233861-9233880 None:intergenic 35.0%
TGGATATTAATTCGTACGTG+TGG + chr7_1:9233862-9233881 None:intergenic 35.0%
GTGTTATCGAAAGAATTGGA+AGG - chr7_1:9233953-9233972 Msa1008680:intron 35.0%
TAATCGAATTGGAACACAAG+TGG - chr7_1:9234107-9234126 Msa1008680:intron 35.0%
CAATCCAATGGTTAATATGG+CGG - chr7_1:9234180-9234199 Msa1008680:intron 35.0%
AGTCTCTATATCTGCGTATA+AGG - chr7_1:9234482-9234501 Msa1008680:intron 35.0%
ATAAGGTTCTGCACTCATTA+TGG - chr7_1:9234499-9234518 Msa1008680:intron 35.0%
!! CAGTTTTGATAGTCGATTCT+GGG + chr7_1:9234560-9234579 None:intergenic 35.0%
!! ACAGTTTTGATAGTCGATTC+TGG + chr7_1:9234561-9234580 None:intergenic 35.0%
TTTAGCAACTTCTTGAAGAG+CGG + chr7_1:9234753-9234772 None:intergenic 35.0%
TAGAGTTACCATTATGCCTA+AGG - chr7_1:9234820-9234839 Msa1008680:CDS 35.0%
CAAACAGCAAGAAAATCCAC+CGG - chr7_1:9231852-9231871 Msa1008680:CDS 40.0%
!!! AGATTTTCTTGCTGCTTTGG+TGG + chr7_1:9231904-9231923 None:intergenic 40.0%
!! AGCAGATTTTCTTGCTGCTT+TGG + chr7_1:9231907-9231926 None:intergenic 40.0%
! TCACGAACCAATCTTTGGAA+TGG + chr7_1:9232038-9232057 None:intergenic 40.0%
CGATTTCACGAACCAATCTT+TGG + chr7_1:9232043-9232062 None:intergenic 40.0%
CAACTTGCAAGAAGAATCAG+AGG - chr7_1:9232212-9232231 Msa1008680:intron 40.0%
! TCGGGGGTGGTTAATAATTT+TGG - chr7_1:9232776-9232795 Msa1008680:intron 40.0%
! CGGGGGTGGTTAATAATTTT+GGG - chr7_1:9232777-9232796 Msa1008680:intron 40.0%
! GGGGGTGGTTAATAATTTTG+GGG - chr7_1:9232778-9232797 Msa1008680:intron 40.0%
GAATTGGATGCTTGTGGATT+TGG - chr7_1:9232900-9232919 Msa1008680:intron 40.0%
CTCAGTTCAGTGGTATCATT+TGG - chr7_1:9232923-9232942 Msa1008680:intron 40.0%
TCAGTGGTATCATTTGGCAT+TGG - chr7_1:9232929-9232948 Msa1008680:intron 40.0%
!! TTAAAGTTGGTCTTGCACCA+AGG + chr7_1:9233211-9233230 None:intergenic 40.0%
TGGTGCAAGACCAACTTTAA+AGG - chr7_1:9233211-9233230 Msa1008680:intron 40.0%
TACAAAGTCAGGGACAAGTT+TGG + chr7_1:9233362-9233381 None:intergenic 40.0%
AAACTTGTCCCTGACTTTGT+AGG - chr7_1:9233361-9233380 Msa1008680:intron 40.0%
AATCAACAGGCGTTAACAGA+AGG + chr7_1:9233445-9233464 None:intergenic 40.0%
ATGGAACGGCATTAATCAAC+AGG + chr7_1:9233458-9233477 None:intergenic 40.0%
TATAGGAAGCGAATTGACAG+TGG + chr7_1:9233488-9233507 None:intergenic 40.0%
CTATAAGCTCAAACGCTACT+TGG - chr7_1:9234319-9234338 Msa1008680:intron 40.0%
ACGCAGATATAGAGACTGTT+TGG + chr7_1:9234479-9234498 None:intergenic 40.0%
!! AGAAAGTATCAGAAGAGCAC+TGG - chr7_1:9231993-9232012 Msa1008680:intron 40.0%
!! GAAAGTATCAGAAGAGCACT+GGG - chr7_1:9234643-9234662 Msa1008680:intron 40.0%
TTAGGAAGCTTCCTTTCCAA+AGG - chr7_1:9234673-9234692 Msa1008680:CDS 40.0%
GTTGCTAAAGCCTATCTTGT+TGG - chr7_1:9234764-9234783 Msa1008680:CDS 40.0%
! CGAGCAAGTTGAATATCCTT+AGG + chr7_1:9234839-9234858 None:intergenic 40.0%
CAAACAGCAAGAAAATCCAC+CGG - chr7_1:9231852-9231871 Msa1008680:CDS 40.0%
!!! AGATTTTCTTGCTGCTTTGG+TGG + chr7_1:9231904-9231923 None:intergenic 40.0%
!! AGCAGATTTTCTTGCTGCTT+TGG + chr7_1:9231907-9231926 None:intergenic 40.0%
! TCACGAACCAATCTTTGGAA+TGG + chr7_1:9232038-9232057 None:intergenic 40.0%
CGATTTCACGAACCAATCTT+TGG + chr7_1:9232043-9232062 None:intergenic 40.0%
CAACTTGCAAGAAGAATCAG+AGG - chr7_1:9232212-9232231 Msa1008680:intron 40.0%
! TCGGGGGTGGTTAATAATTT+TGG - chr7_1:9232776-9232795 Msa1008680:intron 40.0%
! CGGGGGTGGTTAATAATTTT+GGG - chr7_1:9232777-9232796 Msa1008680:intron 40.0%
! GGGGGTGGTTAATAATTTTG+GGG - chr7_1:9232778-9232797 Msa1008680:intron 40.0%
GAATTGGATGCTTGTGGATT+TGG - chr7_1:9232900-9232919 Msa1008680:intron 40.0%
CTCAGTTCAGTGGTATCATT+TGG - chr7_1:9232923-9232942 Msa1008680:intron 40.0%
TCAGTGGTATCATTTGGCAT+TGG - chr7_1:9232929-9232948 Msa1008680:intron 40.0%
!! TTAAAGTTGGTCTTGCACCA+AGG + chr7_1:9233211-9233230 None:intergenic 40.0%
TGGTGCAAGACCAACTTTAA+AGG - chr7_1:9233211-9233230 Msa1008680:intron 40.0%
TACAAAGTCAGGGACAAGTT+TGG + chr7_1:9233362-9233381 None:intergenic 40.0%
AAACTTGTCCCTGACTTTGT+AGG - chr7_1:9233361-9233380 Msa1008680:intron 40.0%
AATCAACAGGCGTTAACAGA+AGG + chr7_1:9233445-9233464 None:intergenic 40.0%
ATGGAACGGCATTAATCAAC+AGG + chr7_1:9233458-9233477 None:intergenic 40.0%
TATAGGAAGCGAATTGACAG+TGG + chr7_1:9233488-9233507 None:intergenic 40.0%
CTATAAGCTCAAACGCTACT+TGG - chr7_1:9234319-9234338 Msa1008680:intron 40.0%
ACGCAGATATAGAGACTGTT+TGG + chr7_1:9234479-9234498 None:intergenic 40.0%
!! AGAAAGTATCAGAAGAGCAC+TGG - chr7_1:9231993-9232012 Msa1008680:intron 40.0%
!! GAAAGTATCAGAAGAGCACT+GGG - chr7_1:9234643-9234662 Msa1008680:intron 40.0%
TTAGGAAGCTTCCTTTCCAA+AGG - chr7_1:9234673-9234692 Msa1008680:CDS 40.0%
GTTGCTAAAGCCTATCTTGT+TGG - chr7_1:9234764-9234783 Msa1008680:CDS 40.0%
! CGAGCAAGTTGAATATCCTT+AGG + chr7_1:9234839-9234858 None:intergenic 40.0%
AGCAGCAAGAAAATCTGCTC+CGG - chr7_1:9231908-9231927 Msa1008680:CDS 45.0%
!! ATTGGTTCGTGAAATCGCTC+AGG - chr7_1:9232046-9232065 Msa1008680:CDS 45.0%
AACAGCGTCCTACAAAGTCA+GGG + chr7_1:9233372-9233391 None:intergenic 45.0%
AAACAGCGTCCTACAAAGTC+AGG + chr7_1:9233373-9233392 None:intergenic 45.0%
AACAGGCGTTAACAGAAGGA+TGG + chr7_1:9233441-9233460 None:intergenic 45.0%
AATTGACAGTGGCAGAAGGA+TGG + chr7_1:9233477-9233496 None:intergenic 45.0%
ACTGCCGCCATATTAACCAT+TGG + chr7_1:9234187-9234206 None:intergenic 45.0%
GCAAAACTCTGCACTAAGAC+TGG - chr7_1:9234525-9234544 Msa1008680:intron 45.0%
!! TTGATAGTCGATTCTGGGAC+TGG + chr7_1:9234555-9234574 None:intergenic 45.0%
AGCAGCAAGAAAATCTGCTC+CGG - chr7_1:9231908-9231927 Msa1008680:CDS 45.0%
!! ATTGGTTCGTGAAATCGCTC+AGG - chr7_1:9232046-9232065 Msa1008680:CDS 45.0%
AACAGCGTCCTACAAAGTCA+GGG + chr7_1:9233372-9233391 None:intergenic 45.0%
AAACAGCGTCCTACAAAGTC+AGG + chr7_1:9233373-9233392 None:intergenic 45.0%
AACAGGCGTTAACAGAAGGA+TGG + chr7_1:9233441-9233460 None:intergenic 45.0%
AATTGACAGTGGCAGAAGGA+TGG + chr7_1:9233477-9233496 None:intergenic 45.0%
ACTGCCGCCATATTAACCAT+TGG + chr7_1:9234187-9234206 None:intergenic 45.0%
GCAAAACTCTGCACTAAGAC+TGG - chr7_1:9234525-9234544 Msa1008680:intron 45.0%
!! TTGATAGTCGATTCTGGGAC+TGG + chr7_1:9234555-9234574 None:intergenic 45.0%
!!! TAAATAAATATATTTTACTT+TGG - chr7_1:9234011-9234030 Msa1008680:intron 5.0%
!!! TTTTATTTGTTTATTTTTTA+AGG + chr7_1:9234159-9234178 None:intergenic 5.0%
!!! TAAATAAATATATTTTACTT+TGG - chr7_1:9234011-9234030 Msa1008680:intron 5.0%
!!! TTTTATTTGTTTATTTTTTA+AGG + chr7_1:9234159-9234178 None:intergenic 5.0%
ACAGCAAGAAAATCCACCGG+AGG - chr7_1:9231855-9231874 Msa1008680:CDS 50.0%
AGAAAATCTGCTCCGGCAAC+CGG - chr7_1:9231915-9231934 Msa1008680:CDS 50.0%
TCTGATTTCGCGCAATGCGA+CGG + chr7_1:9231976-9231995 None:intergenic 50.0%
!! AGAGCACCGAGCTTCTCATT+AGG - chr7_1:9232006-9232025 Msa1008680:intron 50.0%
GCTGCTGAAGCGTATCTTGT+TGG - chr7_1:9232122-9232141 Msa1008680:intron 50.0%
TTAGAGAAAAGTCTCGGGGG+TGG - chr7_1:9232763-9232782 Msa1008680:intron 50.0%
TAGATGTGTTAAGCCTGCGC+TGG - chr7_1:9232832-9232851 Msa1008680:intron 50.0%
!! TTAAAGCATTGGCCACCCGA+AGG + chr7_1:9232860-9232879 None:intergenic 50.0%
! GTGGATTTGGCTCAGTTCAG+TGG - chr7_1:9232913-9232932 Msa1008680:intron 50.0%
ACAGTGGCAGAAGGATGGAA+CGG + chr7_1:9233472-9233491 None:intergenic 50.0%
AGCGAATTGACAGTGGCAGA+AGG + chr7_1:9233481-9233500 None:intergenic 50.0%
!! AGAGCACTGGGCTTCTCATT+AGG - chr7_1:9234655-9234674 Msa1008680:intron 50.0%
GAAGCTTCCTTTCCAAAGGC+TGG - chr7_1:9234677-9234696 Msa1008680:CDS 50.0%
! TCACGAACCAGCCTTTGGAA+AGG + chr7_1:9234687-9234706 None:intergenic 50.0%
TGATCTCACGAACCAGCCTT+TGG + chr7_1:9234692-9234711 None:intergenic 50.0%
! CAACTTGCTCGCAGAATCAG+AGG - chr7_1:9234848-9234867 Msa1008680:CDS 50.0%
TCGCAGAATCAGAGGCGAAA+GGG - chr7_1:9234856-9234875 Msa1008680:CDS 50.0%
ACAGCAAGAAAATCCACCGG+AGG - chr7_1:9231855-9231874 Msa1008680:CDS 50.0%
AGAAAATCTGCTCCGGCAAC+CGG - chr7_1:9231915-9231934 Msa1008680:CDS 50.0%
TCTGATTTCGCGCAATGCGA+CGG + chr7_1:9231976-9231995 None:intergenic 50.0%
!! AGAGCACCGAGCTTCTCATT+AGG - chr7_1:9232006-9232025 Msa1008680:intron 50.0%
GCTGCTGAAGCGTATCTTGT+TGG - chr7_1:9232122-9232141 Msa1008680:intron 50.0%
TTAGAGAAAAGTCTCGGGGG+TGG - chr7_1:9232763-9232782 Msa1008680:intron 50.0%
TAGATGTGTTAAGCCTGCGC+TGG - chr7_1:9232832-9232851 Msa1008680:intron 50.0%
!! TTAAAGCATTGGCCACCCGA+AGG + chr7_1:9232860-9232879 None:intergenic 50.0%
! GTGGATTTGGCTCAGTTCAG+TGG - chr7_1:9232913-9232932 Msa1008680:intron 50.0%
ACAGTGGCAGAAGGATGGAA+CGG + chr7_1:9233472-9233491 None:intergenic 50.0%
AGCGAATTGACAGTGGCAGA+AGG + chr7_1:9233481-9233500 None:intergenic 50.0%
!! AGAGCACTGGGCTTCTCATT+AGG - chr7_1:9234655-9234674 Msa1008680:intron 50.0%
GAAGCTTCCTTTCCAAAGGC+TGG - chr7_1:9234677-9234696 Msa1008680:CDS 50.0%
! TCACGAACCAGCCTTTGGAA+AGG + chr7_1:9234687-9234706 None:intergenic 50.0%
TGATCTCACGAACCAGCCTT+TGG + chr7_1:9234692-9234711 None:intergenic 50.0%
! CAACTTGCTCGCAGAATCAG+AGG - chr7_1:9234848-9234867 Msa1008680:CDS 50.0%
TCGCAGAATCAGAGGCGAAA+GGG - chr7_1:9234856-9234875 Msa1008680:CDS 50.0%
! TTTCCGTGGGGCTTTTCCTC+CGG + chr7_1:9231874-9231893 None:intergenic 55.0%
! TGGTGGCGAGTTGTTTCCGT+GGG + chr7_1:9231887-9231906 None:intergenic 55.0%
!! TTGGTGGCGAGTTGTTTCCG+TGG + chr7_1:9231888-9231907 None:intergenic 55.0%
TTCTTCACTCCTCCGGTTGC+CGG + chr7_1:9231930-9231949 None:intergenic 55.0%
GTGTGGCTTCTTCACTCCTC+CGG + chr7_1:9231937-9231956 None:intergenic 55.0%
AAGCCACACAGATTCCGTCC+AGG - chr7_1:9231948-9231967 Msa1008680:CDS 55.0%
GTTCCTGGACGGAATCTGTG+TGG + chr7_1:9231954-9231973 None:intergenic 55.0%
!! GCTGGTTCGTGAGATCACTC+AGG - chr7_1:9234695-9234714 Msa1008680:CDS 55.0%
CTCGCAGAATCAGAGGCGAA+AGG - chr7_1:9234855-9234874 Msa1008680:CDS 55.0%
! TTTCCGTGGGGCTTTTCCTC+CGG + chr7_1:9231874-9231893 None:intergenic 55.0%
! TGGTGGCGAGTTGTTTCCGT+GGG + chr7_1:9231887-9231906 None:intergenic 55.0%
!! TTGGTGGCGAGTTGTTTCCG+TGG + chr7_1:9231888-9231907 None:intergenic 55.0%
TTCTTCACTCCTCCGGTTGC+CGG + chr7_1:9231930-9231949 None:intergenic 55.0%
GTGTGGCTTCTTCACTCCTC+CGG + chr7_1:9231937-9231956 None:intergenic 55.0%
AAGCCACACAGATTCCGTCC+AGG - chr7_1:9231948-9231967 Msa1008680:CDS 55.0%
GTTCCTGGACGGAATCTGTG+TGG + chr7_1:9231954-9231973 None:intergenic 55.0%
!! GCTGGTTCGTGAGATCACTC+AGG - chr7_1:9234695-9234714 Msa1008680:CDS 55.0%
CTCGCAGAATCAGAGGCGAA+AGG - chr7_1:9234855-9234874 Msa1008680:CDS 55.0%
! GGTGGCGAGTTGTTTCCGTG+GGG + chr7_1:9231886-9231905 None:intergenic 60.0%
AAATCTGCTCCGGCAACCGG+AGG - chr7_1:9231918-9231937 Msa1008680:CDS 60.0%
GCAATGCGACGGTTCCTGGA+CGG + chr7_1:9231965-9231984 None:intergenic 60.0%
TAAGCCTGCGCTGGAGCCTT+CGG - chr7_1:9232841-9232860 Msa1008680:intron 60.0%
! GGTGGCGAGTTGTTTCCGTG+GGG + chr7_1:9231886-9231905 None:intergenic 60.0%
AAATCTGCTCCGGCAACCGG+AGG - chr7_1:9231918-9231937 Msa1008680:CDS 60.0%
GCAATGCGACGGTTCCTGGA+CGG + chr7_1:9231965-9231984 None:intergenic 60.0%
TAAGCCTGCGCTGGAGCCTT+CGG - chr7_1:9232841-9232860 Msa1008680:intron 60.0%
CCACCGGAGGAAAAGCCCCA+CGG - chr7_1:9231868-9231887 Msa1008680:CDS 65.0%
TCGCGCAATGCGACGGTTCC+TGG + chr7_1:9231969-9231988 None:intergenic 65.0%
AAGCCTGCGCTGGAGCCTTC+GGG - chr7_1:9232842-9232861 Msa1008680:intron 65.0%
CCACCGGAGGAAAAGCCCCA+CGG - chr7_1:9231868-9231887 Msa1008680:CDS 65.0%
TCGCGCAATGCGACGGTTCC+TGG + chr7_1:9231969-9231988 None:intergenic 65.0%
AAGCCTGCGCTGGAGCCTTC+GGG - chr7_1:9232842-9232861 Msa1008680:intron 65.0%
! CCGTGGGGCTTTTCCTCCGG+TGG + chr7_1:9231871-9231890 None:intergenic 70.0%
! CCGTGGGGCTTTTCCTCCGG+TGG + chr7_1:9231871-9231890 None:intergenic 70.0%
CCACCCGAAGGCTCCAGCGC+AGG + chr7_1:9232848-9232867 None:intergenic 75.0%
CCTGCGCTGGAGCCTTCGGG+TGG - chr7_1:9232845-9232864 Msa1008680:intron 75.0%
CCACCCGAAGGCTCCAGCGC+AGG + chr7_1:9232848-9232867 None:intergenic 75.0%
CCTGCGCTGGAGCCTTCGGG+TGG - chr7_1:9232845-9232864 Msa1008680:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 9231837 9234883 9231837 ID=Msa1008680;Name=Msa1008680
chr7_1 mRNA 9231837 9234883 9231837 ID=Msa1008680-mRNA-1;Parent=Msa1008680;Name=Msa1008680-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0|1|0|0.25|4|0|176
chr7_1 exon 9234671 9234883 9234671 ID=Msa1008680-mRNA-1:exon:2652;Parent=Msa1008680-mRNA-1
chr7_1 exon 9234533 9234652 9234533 ID=Msa1008680-mRNA-1:exon:2651;Parent=Msa1008680-mRNA-1
chr7_1 exon 9232022 9232072 9232022 ID=Msa1008680-mRNA-1:exon:2650;Parent=Msa1008680-mRNA-1
chr7_1 exon 9231837 9231983 9231837 ID=Msa1008680-mRNA-1:exon:2649;Parent=Msa1008680-mRNA-1
chr7_1 CDS 9234671 9234883 9234671 ID=Msa1008680-mRNA-1:cds;Parent=Msa1008680-mRNA-1
chr7_1 CDS 9234533 9234652 9234533 ID=Msa1008680-mRNA-1:cds;Parent=Msa1008680-mRNA-1
chr7_1 CDS 9232022 9232072 9232022 ID=Msa1008680-mRNA-1:cds;Parent=Msa1008680-mRNA-1
chr7_1 CDS 9231837 9231983 9231837 ID=Msa1008680-mRNA-1:cds;Parent=Msa1008680-mRNA-1
Gene Sequence

>Msa1008680

ATGGCGCGTACCAAACAAACAGCAAGAAAATCCACCGGAGGAAAAGCCCCACGGAAACAACTCGCCACCAAAGCAGCAAGAAAATCTGCTCCGGCAACCGGAGGAGTGAAGAAGCCACACAGATTCCGTCCAGGAACCGTCGCATTGCGCGAAATCAGAAAGTATCAGAAGAGCACCGAGCTTCTCATTAGGAAACTTCCATTCCAAAGATTGGATTTCAAAACTGATCTTCGATTTCAGAGTAGTGCTGTTTCTGCTCTTCAAGAAGCTGCTGAAGCGTATCTTGTTGGTTTGTTTGAAGATACGAATCTTTGTGCTATTCATGCTAAGAGATATCAGAAGAGCACTGGGCTTCTCATTAGGAAGCTTCCTTTCCAAAGGCTGAGCAGTGTTGTTTCCGCTCTTCAAGAAGTTGCTAAAGCCTATCTTGTTGGTTTGTTTGAAGATACGAATCTTTGCGCCATTCATAGAGTTACCATTATGCCTAAGGATATTCAACTTGCTCGCAGAATCAGAGGCGAAAGGGATTAA

Protein sequence

>Msa1008680

MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRYQKSTGLLIRKLPFQRLSSVVSALQEVAKAYLVGLFEDTNLCAIHRVTIMPKDIQLARRIRGERD*