AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1091410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1091410 MtrunA17_Chr7g0215341 94.224 831 44 1 1 831 1 827 0.0 1592
Msa1091410 MtrunA17_Chr6g0484831 90.299 835 77 2 1 831 1 835 0.0 1541
Msa1091410 MtrunA17_Chr5g0406641 91.257 835 68 3 1 830 1 835 0.0 1520
Msa1091410 MtrunA17_Chr4g0007641 79.621 844 158 6 1 831 1 843 0.0 1359
Msa1091410 MtrunA17_Chr6g0464681 68.548 868 194 10 1 831 1 826 0.0 1171
Msa1091410 MtrunA17_Chr6g0486931 55.243 782 317 11 57 815 146 917 0.0 872
Msa1091410 MtrunA17_Chr8g0369361 51.034 774 355 10 57 814 9 774 0.0 786
Msa1091410 MtrunA17_Chr5g0427891 59.184 343 139 1 473 815 1 342 1.56e-139 417
Msa1091410 MtrunA17_Chr2g0302601 33.777 376 205 8 433 798 1215 1556 3.79e-55 207
Msa1091410 MtrunA17_Chr4g0017221 33.511 376 206 8 433 798 1190 1531 6.41e-54 203
Msa1091410 MtrunA17_Chr6g0477371 33.511 376 206 8 433 798 1206 1547 2.05e-53 202
Msa1091410 MtrunA17_Chr8g0364091 44.068 177 86 6 125 289 37 212 3.01e-37 140
Msa1091410 MtrunA17_Chr8g0364111 77.273 66 15 0 749 814 3 68 6.64e-29 110
Msa1091410 MtrunA17_Chr5g0427881 58.462 65 27 0 384 448 39 103 6.68e-22 91.3
Msa1091410 MtrunA17_Chr5g0427871 46.154 104 47 2 57 151 38 141 3.86e-21 90.5
Msa1091410 MtrunA17_Chr3g0087051 34.545 165 84 4 642 798 2 150 1.43e-20 89.4
Msa1091410 MtrunA17_Chr2g0306841 36.364 88 56 0 548 635 15 102 1.06e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1091410 AT1G80740.1 51.677 805 338 10 42 818 4 785 0.0 817
Msa1091410 AT1G69770.1 51.193 838 368 13 1 811 1 824 0.0 811
Msa1091410 AT4G19020.1 50.582 773 353 6 57 814 523 1281 0.0 791
Msa1091410 AT4G19020.2 50.582 773 353 6 57 814 475 1233 0.0 791
Msa1091410 AT4G14140.3 35.040 371 207 7 433 798 1168 1509 6.00e-56 210
Msa1091410 AT4G14140.1 35.040 371 207 7 433 798 1168 1509 6.00e-56 210
Msa1091410 AT4G14140.2 34.667 375 203 8 433 798 1194 1535 7.29e-56 209
Msa1091410 AT4G08990.1 35.294 374 202 9 433 798 1161 1502 2.68e-54 205
Msa1091410 AT4G13610.1 34.409 372 196 8 433 798 1070 1399 1.20e-53 203
Msa1091410 AT5G49160.2 32.626 377 208 9 433 798 1095 1436 1.35e-49 190
Msa1091410 AT5G49160.1 32.626 377 208 9 433 798 1183 1524 1.78e-49 190

Find 204 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATTTGCTGGTGGGTTTC+TGG 0.008640 7_3:+6757175 Msa1091410:CDS
TGCTTTGGAGCATCTATTTC+TGG 0.083264 7_3:+6755973 Msa1091410:CDS
ACTTTACTGGATTTGTATTC+TGG 0.102309 7_3:+6755925 Msa1091410:CDS
CCAAAACGTACGTGAGTTTC+TGG 0.160369 7_3:-6756164 None:intergenic
TTCTAGGCCCTGAATATTAT+TGG 0.195110 7_3:-6759914 None:intergenic
TGAAGTCTCACTTTCTATTT+TGG 0.212259 7_3:-6755803 None:intergenic
TTGAACCCGCTCAGTGTAAA+TGG 0.231723 7_3:-6753776 None:intergenic
TCAACACTTTCAAATGAATC+TGG 0.268377 7_3:+6755823 Msa1091410:CDS
TAGACAACTTGGGTACTTAA+AGG 0.288833 7_3:-6759776 None:intergenic
TGTGAGAAGTTTGTACTAAA+TGG 0.291004 7_3:+6756346 Msa1091410:CDS
ACATTAGGTTTGGCAATTCT+AGG 0.297456 7_3:+6759721 Msa1091410:CDS
TAGGCCTGAGTGGACTTTAC+TGG 0.302719 7_3:+6755912 Msa1091410:CDS
CTGATGATTATGCAAGATTC+TGG 0.311181 7_3:+6759961 Msa1091410:three_prime_UTR
GATTCTGGAAACATAAAATA+TGG 0.313320 7_3:+6759976 Msa1091410:three_prime_UTR
ACATTCATTCATACAATTCT+AGG 0.314440 7_3:-6759930 None:intergenic
CTTGCCCTTGGATACACATT+AGG 0.317533 7_3:+6759706 Msa1091410:CDS
TTCGATTTCTTTCTTCTAGA+AGG 0.320245 7_3:-6754080 None:intergenic
TTCTTCAACCGGAGATTGTT+TGG 0.326628 7_3:-6754039 None:intergenic
AAATTTGCTGGTGGGTTTCT+GGG 0.327523 7_3:+6757176 Msa1091410:CDS
CCAGACTGCTATAAGCTTTG+TGG 0.329709 7_3:+6759128 Msa1091410:CDS
AACATTTGAGAAAGTTATAT+AGG 0.344153 7_3:-6755665 None:intergenic
CATCCGAGCTTGATAATTCA+TGG 0.344162 7_3:-6757225 None:intergenic
ATCCTTTAGATTGTTTAGTT+AGG 0.347736 7_3:+6755458 Msa1091410:CDS
CATATGGCCTTCCTCAATTT+CGG 0.349601 7_3:+6757267 Msa1091410:CDS
CCACCTTGTCAAGGTGTTAG+TGG 0.350266 7_3:+6757023 Msa1091410:CDS
ATGTCCACTGGTCTTTGCTT+TGG 0.352341 7_3:+6755958 Msa1091410:CDS
AGATATGGAACCTTCTCCTT+TGG 0.356040 7_3:-6758311 None:intergenic
CTTTACTGGATTTGTATTCT+GGG 0.362248 7_3:+6755926 Msa1091410:CDS
TTAGTGGTTTCAATCGCTTC+AGG 0.364770 7_3:+6757039 Msa1091410:CDS
GTCAAATTAAAGAATGTAAT+AGG 0.367477 7_3:+6755893 Msa1091410:CDS
GGGCTCCCATGTATCATAAC+TGG 0.370498 7_3:-6756652 None:intergenic
TATCCAAGGGCAAGGGCAAC+AGG 0.371847 7_3:-6759697 None:intergenic
AGGAACGACTTCGTCTTGTT+TGG 0.374277 7_3:-6753994 None:intergenic
GAAACATAAAATATGGCAAA+TGG 0.375563 7_3:+6759983 Msa1091410:three_prime_UTR
GTTCCTGTTGCCCTTGCCCT+TGG 0.380094 7_3:+6759694 Msa1091410:CDS
ACCTGACTCTGAGGTATTTG+AGG 0.384130 7_3:+6756447 Msa1091410:CDS
AACACATACCTCTGTTTGAC+AGG 0.386966 7_3:-6759152 None:intergenic
GTAAAATATTGTTCTTCATC+AGG 0.390612 7_3:-6755241 None:intergenic
AAAAGAGTGTATCTAAAATC+TGG 0.397497 7_3:+6758478 Msa1091410:CDS
ACAAATGTCATAGCATAATC+TGG 0.400607 7_3:-6758595 None:intergenic
TCCAGAGATGGTGAATTATT+CGG 0.404648 7_3:+6758199 Msa1091410:intron
AGACAACTTGGGTACTTAAA+GGG 0.412259 7_3:-6759775 None:intergenic
TTGTTTGGCTTTCTTCCGTT+TGG 0.415225 7_3:-6754024 None:intergenic
CCTTGGATACACATTAGGTT+TGG 0.421810 7_3:+6759711 Msa1091410:CDS
TGGCCAAGGCATTATACCTT+GGG 0.423475 7_3:+6757649 Msa1091410:CDS
ACATTTGAGAAAGTTATATA+GGG 0.426320 7_3:-6755664 None:intergenic
GCTGAATACAACAGGCCATT+TGG 0.427862 7_3:+6758713 Msa1091410:intron
ATGATGGCTGCAGGGTCATA+TGG 0.428980 7_3:+6757251 Msa1091410:CDS
TTCCTAACTAAACAATCTAA+AGG 0.433146 7_3:-6755460 None:intergenic
TATCGTGAAGCGAAGGTTGA+TGG 0.441672 7_3:+6754342 Msa1091410:CDS
CTTCGTCGGAGAACTTATTC+CGG 0.444090 7_3:+6754133 Msa1091410:CDS
ATGAGTTGGTAACGGATATG+AGG 0.447163 7_3:-6757439 None:intergenic
TAAAGAAAACAAGGTGGAAT+GGG 0.451055 7_3:+6758444 Msa1091410:CDS
GAAACCAGTTCTTCTTCAAC+CGG 0.452190 7_3:-6754050 None:intergenic
CTAAGAACTCTGTCTTGGTC+TGG 0.452322 7_3:-6759074 None:intergenic
CTGGATTTGTATTCTGGGTG+TGG 0.458568 7_3:+6755931 Msa1091410:CDS
CTGATGAAGCACAAAAGAAA+TGG 0.459268 7_3:+6754156 Msa1091410:CDS
CTTGCATAATCATCAGTTGT+AGG 0.460358 7_3:-6759954 None:intergenic
TTTCTTACTTCAAACTCAGT+AGG 0.462655 7_3:-6757486 None:intergenic
ATCTCCGGTTGAAGAAGAAC+TGG 0.462907 7_3:+6754046 Msa1091410:CDS
TTCGGCTCTGTAAAACCATT+GGG 0.464112 7_3:-6755266 None:intergenic
CTCAGTAGGGATGACTGATC+TGG 0.468959 7_3:-6757472 None:intergenic
CAACACTTTCAAATGAATCT+GGG 0.470283 7_3:+6755824 Msa1091410:CDS
CGAATAACAACCTGGTTATG+AGG 0.471305 7_3:-6758785 None:intergenic
ATGCTATGACATTTGTTCAC+GGG 0.472626 7_3:+6758602 Msa1091410:CDS
TTTCTGGGGCGTTATGCTGT+AGG 0.473896 7_3:+6757191 Msa1091410:CDS
CGGATGGGAATGATGGCTGC+AGG 0.474115 7_3:+6757242 Msa1091410:CDS
AAAGGACGGGCTAGACAACT+TGG 0.474566 7_3:-6759787 None:intergenic
ACAGGCCATTTGGTCGACTT+TGG 0.475021 7_3:+6758723 Msa1091410:intron
AATATACCTCAAGCCCTCAA+TGG 0.475252 7_3:-6756673 None:intergenic
ACCTCAAATACCTCAGAGTC+AGG 0.475532 7_3:-6756448 None:intergenic
CCACAAAGCTTATAGCAGTC+TGG 0.481850 7_3:-6759128 None:intergenic
ACGATTCCAGTTATGATACA+TGG 0.482110 7_3:+6756646 Msa1091410:CDS
TGTGTGTGTGCAGGTGATTA+AGG 0.483671 7_3:+6755378 Msa1091410:intron
AAACATAAAATATGGCAAAT+GGG 0.485354 7_3:+6759984 Msa1091410:three_prime_UTR
TTTCGGCTCTGTAAAACCAT+TGG 0.486282 7_3:-6755267 None:intergenic
GCCATTTGGTCGACTTTGGT+GGG 0.487889 7_3:+6758727 Msa1091410:CDS
CGAGAGAATGCAAGGCTACA+AGG 0.488910 7_3:+6759101 Msa1091410:CDS
TTTATCAGCTGCATGGACAT+TGG 0.493693 7_3:-6755848 None:intergenic
TTCTTACTTCAAACTCAGTA+GGG 0.495616 7_3:-6757485 None:intergenic
ATATACCTCAAGCCCTCAAT+GGG 0.497888 7_3:-6756672 None:intergenic
TCATCATCAACTACATCTAA+AGG 0.502737 7_3:-6759805 None:intergenic
GGCCATTTGGTCGACTTTGG+TGG 0.503320 7_3:+6758726 Msa1091410:intron
GATACATGGGAGCCCATTGA+GGG 0.504051 7_3:+6756660 Msa1091410:CDS
TGCATATTCATTTATATCCA+CGG 0.506267 7_3:-6756117 None:intergenic
CACAAAAGAAATGGCCTCAC+CGG 0.507084 7_3:+6754165 Msa1091410:CDS
GAACTCTGTCTTGGTCTGGA+TGG 0.507573 7_3:-6759070 None:intergenic
AAAGAAATCGAAGCAATCTT+CGG 0.508099 7_3:+6754091 Msa1091410:CDS
GGGTGTGGAGCTATGTCCAC+TGG 0.509075 7_3:+6755946 Msa1091410:CDS
TCATCGGTGTTTAATTTCAA+AGG 0.509674 7_3:-6758266 None:intergenic
TCAGCAACTAATTGTTTACA+TGG 0.512928 7_3:+6757094 Msa1091410:CDS
CACCACAAATAAAATCAGCT+TGG 0.514779 7_3:-6756998 None:intergenic
TTAAAGAAAACAAGGTGGAA+TGG 0.515036 7_3:+6758443 Msa1091410:CDS
TCCGACGATGCATGCTTCGT+CGG 0.515548 7_3:+6754119 Msa1091410:CDS
TTAGATGTAGTTGATGATGA+TGG 0.517459 7_3:+6759808 Msa1091410:CDS
GTCCCCAAGGTATAATGCCT+TGG 0.517822 7_3:-6757652 None:intergenic
ATCTTTCAGGTGCAATGGAA+GGG 0.518544 7_3:+6756621 Msa1091410:intron
AAGAAGATGAATAGTGAAAG+CGG 0.518886 7_3:-6753892 None:intergenic
TCAAGCTCGGATGGGAATGA+TGG 0.519547 7_3:+6757235 Msa1091410:CDS
CTGGCCAAGGCATTATACCT+TGG 0.521309 7_3:+6757648 Msa1091410:CDS
CACTAATGAAAAGTGTCAGC+TGG 0.523124 7_3:+6757629 Msa1091410:CDS
AAAACACGCATCCGAAATTG+AGG 0.524141 7_3:-6757278 None:intergenic
CAAAACGTACGTGAGTTTCT+GGG 0.525514 7_3:-6756163 None:intergenic
TCGTTCCTCATTCTTCCAAA+CGG 0.526193 7_3:+6754009 Msa1091410:CDS
TTATAATCTTTCAGGTGCAA+TGG 0.528275 7_3:+6756616 Msa1091410:intron
GAAGCCTAAGTATGTTCTCA+TGG 0.528299 7_3:+6757133 Msa1091410:CDS
AACAACCTGGTTATGAGGCT+CGG 0.528328 7_3:-6758780 None:intergenic
AATCTTTCAGGTGCAATGGA+AGG 0.528541 7_3:+6756620 Msa1091410:intron
TCCCACCAAAGTCGACCAAA+TGG 0.528934 7_3:-6758728 None:intergenic
CGATTATTTATAAATGAAGC+GGG 0.529429 7_3:-6753857 None:intergenic
CATGAATTATCAAGCTCGGA+TGG 0.529786 7_3:+6757226 Msa1091410:CDS
GAAGAAAGCCAAACAATCTC+CGG 0.530553 7_3:+6754031 Msa1091410:CDS
TTCTTCCGTTTGGAAGAATG+AGG 0.531258 7_3:-6754014 None:intergenic
ACAGATTCTGATTTGAATGC+TGG 0.534166 7_3:+6756379 Msa1091410:CDS
ATCAACTACATCTAAAGGAC+GGG 0.535962 7_3:-6759800 None:intergenic
CCAAACCTAATGTGTATCCA+AGG 0.536081 7_3:-6759711 None:intergenic
AATTTCCATTTACACTGAGC+GGG 0.537479 7_3:+6753771 None:intergenic
TTCTGGCATTAAGCTTGTCA+CGG 0.537807 7_3:+6755990 Msa1091410:CDS
TTGCCACATTCCAAAGGAGA+AGG 0.538842 7_3:+6758301 Msa1091410:CDS
AGCGGGTTCAACAAAAGTGC+GGG 0.539930 7_3:+6753788 Msa1091410:five_prime_UTR
ATCGTGAAGCGAAGGTTGAT+GGG 0.542081 7_3:+6754343 Msa1091410:CDS
GCGATTATTTATAAATGAAG+CGG 0.548121 7_3:-6753858 None:intergenic
TATATCAGATTAAAGAGAAG+TGG 0.554424 7_3:+6757862 Msa1091410:CDS
GAATGCTAAGAACTCTGTCT+TGG 0.555016 7_3:-6759079 None:intergenic
CTGGATTCAACCTCATGAGT+TGG 0.555366 7_3:-6757453 None:intergenic
GAACCTTCTCCTTTGGAATG+TGG 0.555858 7_3:-6758304 None:intergenic
GTGGTGAGACTTACAGGAAG+AGG 0.556985 7_3:-6756871 None:intergenic
ATGTGCAGGTACATGCAAGT+TGG 0.560046 7_3:+6759658 Msa1091410:intron
CTCACTCGTTCTTAGTGTAC+CGG 0.561833 7_3:-6754184 None:intergenic
AGACTACTCTCTATTTGCTA+TGG 0.562696 7_3:+6756475 Msa1091410:CDS
TCTAAAATCTGGAAAGCCGT+TGG 0.563755 7_3:+6758489 Msa1091410:CDS
AGCGATGATGAAAAGAGCTA+CGG 0.565697 7_3:+6757811 Msa1091410:CDS
AAGGGCCGAGCCTCATAACC+AGG 0.568054 7_3:+6758775 Msa1091410:CDS
AGTTGTCAAAGGACCGTCAT+CGG 0.570986 7_3:-6759749 None:intergenic
ATGAATTATCAAGCTCGGAT+GGG 0.571223 7_3:+6757227 Msa1091410:CDS
TGTGGTGGGCCACCTTGTCA+AGG 0.574035 7_3:+6757014 Msa1091410:CDS
TTGTGTCCACTGTTGTAACA+AGG 0.575348 7_3:+6758756 Msa1091410:CDS
TGAAAAGTGTCAGCTGGCCA+AGG 0.575456 7_3:+6757635 Msa1091410:CDS
AATTTGCTGGTGGGTTTCTG+GGG 0.576721 7_3:+6757177 Msa1091410:CDS
TTGAATGCTGGTGAAGAAGC+TGG 0.577481 7_3:+6756391 Msa1091410:CDS
TTCTCCATGAGAACATACTT+AGG 0.578027 7_3:-6757137 None:intergenic
CGCAATTGATGATCTCCCAC+CGG 0.580227 7_3:+6757674 Msa1091410:CDS
GAAGAAGCTGGTGAAGAAGC+TGG 0.580453 7_3:+6756403 Msa1091410:CDS
CCTACTCTGAAATATAGTCC+TGG 0.581965 7_3:-6756520 None:intergenic
GGACTACATTGCTAAGATTG+TGG 0.583306 7_3:+6755204 Msa1091410:CDS
CTAATGTGTATCCAAGGGCA+AGG 0.584216 7_3:-6759705 None:intergenic
TGATACATGGGAGCCCATTG+AGG 0.584875 7_3:+6756659 Msa1091410:CDS
TGAAAAGACATGGATTAATG+AGG 0.588868 7_3:-6759847 None:intergenic
GACAACTTGGGTACTTAAAG+GGG 0.589664 7_3:-6759774 None:intergenic
TTAGCATTCGAGAGAATGCA+AGG 0.591436 7_3:+6759093 Msa1091410:CDS
GCGATGATGAAAAGAGCTAC+GGG 0.591951 7_3:+6757812 Msa1091410:CDS
GCAAACTCTCTCATAGTCAT+CGG 0.593163 7_3:-6758282 None:intergenic
TCCGACGAAGCATGCATCGT+CGG 0.593618 7_3:-6754120 None:intergenic
TTTAAGTCTACTGAAAGAGT+GGG 0.594108 7_3:+6756315 Msa1091410:CDS
TGACTTGAAGAGATGGGCCG+TGG 0.594840 7_3:+6756100 Msa1091410:intron
TGGCCATGAATTATCAAGCT+CGG 0.597417 7_3:+6757222 Msa1091410:CDS
CGATTCCAGTTATGATACAT+GGG 0.597731 7_3:+6756647 Msa1091410:CDS
GGGAGCCCATTGAGGGCTTG+AGG 0.601086 7_3:+6756667 Msa1091410:CDS
GATAATTCATGGCCACTAGA+CGG 0.606811 7_3:-6757214 None:intergenic
CAATTTCCATTTACACTGAG+CGG 0.606867 7_3:+6753770 None:intergenic
ATTCTAGGACTCTCCGATGA+CGG 0.608856 7_3:+6759736 Msa1091410:CDS
TGCAGGTGATTAAGGACCAT+GGG 0.609611 7_3:+6755386 Msa1091410:intron
TGAGTTGGTAACGGATATGA+GGG 0.612406 7_3:-6757438 None:intergenic
TATGCTATGACATTTGTTCA+CGG 0.613180 7_3:+6758601 Msa1091410:CDS
GGCAAACTTCAGGGACCTCG+AGG 0.614201 7_3:+6758411 Msa1091410:CDS
GATCATCAATTGCGTCCCCA+AGG 0.614386 7_3:-6757665 None:intergenic
GTTTCACTATCGTGAAGCGA+AGG 0.614568 7_3:+6754335 Msa1091410:CDS
GAGAGTTTGCCACATTCCAA+AGG 0.615917 7_3:+6758295 Msa1091410:CDS
AGATAACAGTTGAAAAGACA+TGG 0.616171 7_3:-6759857 None:intergenic
CATCAACTACATCTAAAGGA+CGG 0.616327 7_3:-6759801 None:intergenic
AATTCAGGTGAGGAATGAGC+CGG 0.616828 7_3:+6756282 Msa1091410:intron
ACTTTCTCAAATGTTGACAA+TGG 0.620113 7_3:+6755673 Msa1091410:CDS
TCAACCTCATGAGTTGGTAA+CGG 0.622459 7_3:-6757447 None:intergenic
TTATGCTGTAGGCCGTCTAG+TGG 0.625272 7_3:+6757202 Msa1091410:CDS
TGATCATACAGCATACCACT+TGG 0.627170 7_3:-6758239 None:intergenic
CACGCATCCGAAATTGAGGA+AGG 0.629581 7_3:-6757274 None:intergenic
GCAAACTTCAGGGACCTCGA+GGG 0.637506 7_3:+6758412 Msa1091410:CDS
CAAACCTAATGTGTATCCAA+GGG 0.638670 7_3:-6759710 None:intergenic
GGATGGGAATGATGGCTGCA+GGG 0.639348 7_3:+6757243 Msa1091410:CDS
TAATGTGTATCCAAGGGCAA+GGG 0.640727 7_3:-6759704 None:intergenic
AAGAATGTAATAGGCCTGAG+TGG 0.644520 7_3:+6755902 Msa1091410:CDS
TGCTCCAAAGCAAAGACCAG+TGG 0.647355 7_3:-6755962 None:intergenic
AAATCCAGTAAAGTCCACTC+AGG 0.651482 7_3:-6755916 None:intergenic
AGATGATTCACCTGACTCTG+AGG 0.655360 7_3:+6756438 Msa1091410:CDS
TGTGTCCACTGTTGTAACAA+GGG 0.656136 7_3:+6758757 Msa1091410:CDS
GAGCGGGTTCAACAAAAGTG+CGG 0.656242 7_3:+6753787 Msa1091410:five_prime_UTR
ACACATACCTCTGTTTGACA+GGG 0.662004 7_3:-6759151 None:intergenic
AAGGACGGGCTAGACAACTT+GGG 0.665885 7_3:-6759786 None:intergenic
ATATCCGTTACCAACTCATG+AGG 0.669953 7_3:+6757443 Msa1091410:CDS
ATGTCAAAATAGAATTCACA+AGG 0.670234 7_3:-6755628 None:intergenic
CTCGGCCCTTGTTACAACAG+TGG 0.671085 7_3:-6758762 None:intergenic
GTGCAGGTGATTAAGGACCA+TGG 0.674534 7_3:+6755385 Msa1091410:intron
GGCCAAGGCATTATACCTTG+GGG 0.678055 7_3:+6757650 Msa1091410:CDS
CATATATACATACTTAGAGG+AGG 0.681619 7_3:-6758626 None:intergenic
CCACTAACACCTTGACAAGG+TGG 0.683957 7_3:-6757023 None:intergenic
GACTCTCAAAGTGCACCAAG+TGG 0.685496 7_3:+6758224 Msa1091410:CDS
TTTGTGGCCCTGTCAAACAG+AGG 0.688111 7_3:+6759144 Msa1091410:CDS
TTAAAGGGGAGAGTTGTCAA+AGG 0.689309 7_3:-6759760 None:intergenic
TCAAAATAGAATTCACAAGG+AGG 0.689598 7_3:-6755625 None:intergenic
TGTGCTAGTTAAAGAAAACA+AGG 0.696627 7_3:+6758435 Msa1091410:CDS
CTTTAACTAGCACACCCTCG+AGG 0.704914 7_3:-6758426 None:intergenic
GCTAGTTAAAGAAAACAAGG+TGG 0.715923 7_3:+6758438 Msa1091410:CDS
TCGTTCTTAGTGTACCGGTG+AGG 0.720228 7_3:-6754179 None:intergenic
AAACCACTAACACCTTGACA+AGG 0.729461 7_3:-6757026 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAATCATATATAAAATAA+CGG - chr7_3:6754982-6755001 None:intergenic 10.0%
!!! TTTATTTCATGTTGAAATTT+TGG + chr7_3:6754456-6754475 Msa1091410:intron 15.0%
!!! TGTTGAAAATTTTGTTTTTT+AGG + chr7_3:6754547-6754566 Msa1091410:intron 15.0%
!!! GTTGAAAATTTTGTTTTTTA+GGG + chr7_3:6754548-6754567 Msa1091410:intron 15.0%
!!! TGTTGTAAATTTTGTTTTTT+AGG + chr7_3:6754585-6754604 Msa1091410:intron 15.0%
!!! GTTGTAAATTTTGTTTTTTA+GGG + chr7_3:6754586-6754605 Msa1091410:intron 15.0%
!!! TTTTTTTTTTATGTTGATTG+TGG + chr7_3:6755758-6755777 Msa1091410:intron 15.0%
!!! TAATTTGCATAATGTTTTTT+TGG + chr7_3:6756022-6756041 Msa1091410:intron 15.0%
!! CTATAAATTTATAATCTTTC+AGG + chr7_3:6756608-6756627 Msa1091410:intron 15.0%
!!! ATGAAAGATTTTGTTATAAA+TGG + chr7_3:6756829-6756848 Msa1091410:CDS 15.0%
!!! TTTTGTTATAAATGGATATA+AGG + chr7_3:6756837-6756856 Msa1091410:CDS 15.0%
!!! TTACTCTAAATGTTTTAAAA+TGG + chr7_3:6757375-6757394 Msa1091410:intron 15.0%
!! CATATATTTCAATTTCAAAA+TGG - chr7_3:6759355-6759374 None:intergenic 15.0%
!! ATATAGAAGTTAGTTATAAT+AGG - chr7_3:6759411-6759430 None:intergenic 15.0%
!!! AAAAAAAAGTATGAAATCCA+AGG + chr7_3:6754892-6754911 Msa1091410:intron 20.0%
!!! TTTATGGTTATTGTTGATTT+TGG + chr7_3:6755346-6755365 Msa1091410:intron 20.0%
!!! ATGTTGATTTTATATACTAC+AGG + chr7_3:6755582-6755601 Msa1091410:intron 20.0%
!! ACATTTGAGAAAGTTATATA+GGG - chr7_3:6755667-6755686 None:intergenic 20.0%
!! AACATTTGAGAAAGTTATAT+AGG - chr7_3:6755668-6755687 None:intergenic 20.0%
!! GTCAAATTAAAGAATGTAAT+AGG + chr7_3:6755893-6755912 Msa1091410:CDS 20.0%
!! TTGCATAAGATAAAGTTATA+AGG - chr7_3:6756554-6756573 None:intergenic 20.0%
!!! ATAATCAATATCTTGATGAT+TGG - chr7_3:6756699-6756718 None:intergenic 20.0%
!!! TTAAGATTTGCTGTTAATTA+AGG + chr7_3:6756741-6756760 Msa1091410:intron 20.0%
!!! TCTAAATGTTTTAAAATGGA+AGG + chr7_3:6757379-6757398 Msa1091410:intron 20.0%
!!! TTTGAGTTTTGAATTATTCT+TGG + chr7_3:6757900-6757919 Msa1091410:intron 20.0%
!! TATAATTAGAATTGTGTATG+TGG + chr7_3:6758084-6758103 Msa1091410:intron 20.0%
!! CATAATATCAATTCAAGATA+TGG - chr7_3:6758329-6758348 None:intergenic 20.0%
!!! TTTTAAAGAGGTTTTACAAT+GGG - chr7_3:6758860-6758879 None:intergenic 20.0%
!!! AATACAACATTGTTTTAAAG+AGG - chr7_3:6758872-6758891 None:intergenic 20.0%
!! ATTTCAATTTCAAAATGGAA+GGG - chr7_3:6759350-6759369 None:intergenic 20.0%
!! TATTTCAATTTCAAAATGGA+AGG - chr7_3:6759351-6759370 None:intergenic 20.0%
!!! ATAATAGGTTTATCAGTTTT+TGG - chr7_3:6759396-6759415 None:intergenic 20.0%
!! AATATTACACCTAAAAATTC+TGG - chr7_3:6759485-6759504 None:intergenic 20.0%
!! TTAGGTGTAATATTTCTTAT+TGG + chr7_3:6759491-6759510 Msa1091410:intron 20.0%
!! TTCCATTATTATGTATATCA+TGG + chr7_3:6759614-6759633 Msa1091410:intron 20.0%
!!! TTTTTAAGCCAATAATATTC+AGG + chr7_3:6759906-6759925 Msa1091410:three_prime_UTR 20.0%
!!! TTTTAAGCCAATAATATTCA+GGG + chr7_3:6759907-6759926 Msa1091410:three_prime_UTR 20.0%
!! AAACATAAAATATGGCAAAT+GGG + chr7_3:6759984-6760003 Msa1091410:three_prime_UTR 20.0%
! CGATTATTTATAAATGAAGC+GGG - chr7_3:6753860-6753879 None:intergenic 25.0%
! GCGATTATTTATAAATGAAG+CGG - chr7_3:6753861-6753880 None:intergenic 25.0%
!!! TGTTGAAATTTTGGTGTTTT+AGG + chr7_3:6754465-6754484 Msa1091410:intron 25.0%
!!! GTTGAAATTTTGGTGTTTTA+GGG + chr7_3:6754466-6754485 Msa1091410:intron 25.0%
!! TTGCTGAAAATTGTGTTTTA+TGG + chr7_3:6754655-6754674 Msa1091410:intron 25.0%
!! TTCATTTCTTTGATTTCTTG+TGG + chr7_3:6754678-6754697 Msa1091410:intron 25.0%
! TTGATTTCTTGTGGAAAATT+TGG + chr7_3:6754687-6754706 Msa1091410:intron 25.0%
!! CATGTTGAAAAATGTGTTTT+AGG + chr7_3:6755000-6755019 Msa1091410:intron 25.0%
! GTAAAATATTGTTCTTCATC+AGG - chr7_3:6755244-6755263 None:intergenic 25.0%
! ATCCTTTAGATTGTTTAGTT+AGG + chr7_3:6755458-6755477 Msa1091410:CDS 25.0%
! TTCCTAACTAAACAATCTAA+AGG - chr7_3:6755463-6755482 None:intergenic 25.0%
! ATGTCAAAATAGAATTCACA+AGG - chr7_3:6755631-6755650 None:intergenic 25.0%
! TGCATATTCATTTATATCCA+CGG - chr7_3:6756120-6756139 None:intergenic 25.0%
! AAAAATCTAGTACTAAGCAA+CGG - chr7_3:6757335-6757354 None:intergenic 25.0%
! GAAATTTACAATCACAACAT+GGG - chr7_3:6757555-6757574 None:intergenic 25.0%
! AGAAATTTACAATCACAACA+TGG - chr7_3:6757556-6757575 None:intergenic 25.0%
! TATATCAGATTAAAGAGAAG+TGG + chr7_3:6757862-6757881 Msa1091410:CDS 25.0%
!!! TTCTTGGTTGTTTTCTTTTT+TGG + chr7_3:6757916-6757935 Msa1091410:intron 25.0%
! AAGCACAATTAGAATTTACA+TGG - chr7_3:6758375-6758394 None:intergenic 25.0%
!! AAAAGAGTGTATCTAAAATC+TGG + chr7_3:6758478-6758497 Msa1091410:CDS 25.0%
! TATATGGAAAAAAAAGGTTG+TGG - chr7_3:6758571-6758590 None:intergenic 25.0%
!!! ACAACCTTTTTTTTCCATAT+AGG + chr7_3:6758570-6758589 Msa1091410:intron 25.0%
!!! GTTTTAAAGAGGTTTTACAA+TGG - chr7_3:6758861-6758880 None:intergenic 25.0%
! TTCTTATTGGACTAACAATA+TGG + chr7_3:6759504-6759523 Msa1091410:intron 25.0%
! TGCCATGATATACATAATAA+TGG - chr7_3:6759619-6759638 None:intergenic 25.0%
! ACATTCATTCATACAATTCT+AGG - chr7_3:6759933-6759952 None:intergenic 25.0%
!! GATTCTGGAAACATAAAATA+TGG + chr7_3:6759976-6759995 Msa1091410:three_prime_UTR 25.0%
! GAAACATAAAATATGGCAAA+TGG + chr7_3:6759983-6760002 Msa1091410:three_prime_UTR 25.0%
AAGAAGATGAATAGTGAAAG+CGG - chr7_3:6753895-6753914 None:intergenic 30.0%
TTCGATTTCTTTCTTCTAGA+AGG - chr7_3:6754083-6754102 None:intergenic 30.0%
AAAGAAATCGAAGCAATCTT+CGG + chr7_3:6754091-6754110 Msa1091410:CDS 30.0%
! TAGGGTTTATTTCTTCATGT+TGG + chr7_3:6754604-6754623 Msa1091410:intron 30.0%
!!! TGTATAGTGTTTTGATGAAG+CGG + chr7_3:6754865-6754884 Msa1091410:intron 30.0%
! TAGTAATTTGCCACATCATT+CGG + chr7_3:6754917-6754936 Msa1091410:intron 30.0%
! TGATGTGATGAATGTTGTTT+AGG + chr7_3:6755165-6755184 Msa1091410:intron 30.0%
! GATGTGATGAATGTTGTTTA+GGG + chr7_3:6755166-6755185 Msa1091410:intron 30.0%
! ATGTGATGAATGTTGTTTAG+GGG + chr7_3:6755167-6755186 Msa1091410:intron 30.0%
! AACAATATTTTACTGCCCAA+TGG + chr7_3:6755251-6755270 Msa1091410:CDS 30.0%
! TTCAATCTTTACCGTGTTTT+CGG - chr7_3:6755287-6755306 None:intergenic 30.0%
!!! AACTCTTTCGTGTTTTGTTT+TGG + chr7_3:6755311-6755330 Msa1091410:intron 30.0%
TCAAAATAGAATTCACAAGG+AGG - chr7_3:6755628-6755647 None:intergenic 30.0%
ACTTTCTCAAATGTTGACAA+TGG + chr7_3:6755673-6755692 Msa1091410:CDS 30.0%
! TGAAGTCTCACTTTCTATTT+TGG - chr7_3:6755806-6755825 None:intergenic 30.0%
TCAACACTTTCAAATGAATC+TGG + chr7_3:6755823-6755842 Msa1091410:CDS 30.0%
CAACACTTTCAAATGAATCT+GGG + chr7_3:6755824-6755843 Msa1091410:CDS 30.0%
ACTTTACTGGATTTGTATTC+TGG + chr7_3:6755925-6755944 Msa1091410:CDS 30.0%
CTTTACTGGATTTGTATTCT+GGG + chr7_3:6755926-6755945 Msa1091410:CDS 30.0%
!!! TTGTTTTTGACTTGAAGAGA+TGG + chr7_3:6756093-6756112 Msa1091410:intron 30.0%
!!! TGTTTTTGACTTGAAGAGAT+GGG + chr7_3:6756094-6756113 Msa1091410:intron 30.0%
CTTTCCAAAATGTCAAATTC+AGG + chr7_3:6756267-6756286 Msa1091410:intron 30.0%
!! TTTTAAGTCTACTGAAAGAG+TGG + chr7_3:6756314-6756333 Msa1091410:CDS 30.0%
TTTAAGTCTACTGAAAGAGT+GGG + chr7_3:6756315-6756334 Msa1091410:CDS 30.0%
TGTGAGAAGTTTGTACTAAA+TGG + chr7_3:6756346-6756365 Msa1091410:CDS 30.0%
! TTATAATCTTTCAGGTGCAA+TGG + chr7_3:6756616-6756635 Msa1091410:intron 30.0%
TTGAGTACAAGTCAATAATG+AGG - chr7_3:6756898-6756917 None:intergenic 30.0%
!! AAGCTGATTTTATTTGTGGT+GGG + chr7_3:6757000-6757019 Msa1091410:CDS 30.0%
!!! TGATTTTTTTCATCCTCCAA+TGG - chr7_3:6757077-6757096 None:intergenic 30.0%
TCAGCAACTAATTGTTTACA+TGG + chr7_3:6757094-6757113 Msa1091410:CDS 30.0%
!!! GTTGACATTTTGAAATTTGC+TGG + chr7_3:6757164-6757183 Msa1091410:CDS 30.0%
!!! ACATTTTGAAATTTGCTGGT+GGG + chr7_3:6757168-6757187 Msa1091410:CDS 30.0%
TTCTTACTTCAAACTCAGTA+GGG - chr7_3:6757488-6757507 None:intergenic 30.0%
TTTCTTACTTCAAACTCAGT+AGG - chr7_3:6757489-6757508 None:intergenic 30.0%
TCTTTGTACTTTCATAATGC+AGG + chr7_3:6757587-6757606 Msa1091410:intron 30.0%
TTTGATTCCATTTCTTTCCT+TGG + chr7_3:6757755-6757774 Msa1091410:intron 30.0%
!!! TAGTTTTGAAAATCAGTACG+AGG - chr7_3:6757844-6757863 None:intergenic 30.0%
CAAAATGCAGTTCATATATG+CGG - chr7_3:6758046-6758065 None:intergenic 30.0%
! TCATCGGTGTTTAATTTCAA+AGG - chr7_3:6758269-6758288 None:intergenic 30.0%
TGTGCTAGTTAAAGAAAACA+AGG + chr7_3:6758435-6758454 Msa1091410:CDS 30.0%
TTAAAGAAAACAAGGTGGAA+TGG + chr7_3:6758443-6758462 Msa1091410:CDS 30.0%
TAAAGAAAACAAGGTGGAAT+GGG + chr7_3:6758444-6758463 Msa1091410:CDS 30.0%
! AGATACACTCTTTTAACAGA+CGG - chr7_3:6758472-6758491 None:intergenic 30.0%
TACTAATTCTGTCTTGTCTT+AGG + chr7_3:6758512-6758531 Msa1091410:intron 30.0%
ACTAATTCTGTCTTGTCTTA+GGG + chr7_3:6758513-6758532 Msa1091410:intron 30.0%
GGAACCTATATGGAAAAAAA+AGG - chr7_3:6758577-6758596 None:intergenic 30.0%
ACAAATGTCATAGCATAATC+TGG - chr7_3:6758598-6758617 None:intergenic 30.0%
TATGCTATGACATTTGTTCA+CGG + chr7_3:6758601-6758620 Msa1091410:CDS 30.0%
CATATATACATACTTAGAGG+AGG - chr7_3:6758629-6758648 None:intergenic 30.0%
GCACATATATACATACTTAG+AGG - chr7_3:6758632-6758651 None:intergenic 30.0%
!!! ATCTGACCATGTTTTTTGTT+TGG + chr7_3:6758947-6758966 Msa1091410:intron 30.0%
TCCAAAGTTATTCCATATCT+AGG + chr7_3:6759040-6759059 Msa1091410:intron 30.0%
TATGAAAATTTGTGTATGCG+AGG - chr7_3:6759251-6759270 None:intergenic 30.0%
TCATATGAAGTTTACAGACA+AGG + chr7_3:6759304-6759323 Msa1091410:intron 30.0%
!!! TTTTTGGTTAAGGAATTGGA+AGG - chr7_3:6759380-6759399 None:intergenic 30.0%
!!! TCAGTTTTTGGTTAAGGAAT+TGG - chr7_3:6759384-6759403 None:intergenic 30.0%
!!! GGTTTATCAGTTTTTGGTTA+AGG - chr7_3:6759390-6759409 None:intergenic 30.0%
TATTTCCATCTTTAATGTGC+AGG + chr7_3:6759644-6759663 Msa1091410:intron 30.0%
TCATCATCAACTACATCTAA+AGG - chr7_3:6759808-6759827 None:intergenic 30.0%
!! TTAGATGTAGTTGATGATGA+TGG + chr7_3:6759808-6759827 Msa1091410:CDS 30.0%
! TGAAAAGACATGGATTAATG+AGG - chr7_3:6759850-6759869 None:intergenic 30.0%
AGATAACAGTTGAAAAGACA+TGG - chr7_3:6759860-6759879 None:intergenic 30.0%
CTGATGAAGCACAAAAGAAA+TGG + chr7_3:6754156-6754175 Msa1091410:CDS 35.0%
! TGATGGGATTTTATATCAGC+TGG + chr7_3:6754359-6754378 Msa1091410:CDS 35.0%
! GTTTTGTGGTACAATCATTC+GGG - chr7_3:6754780-6754799 None:intergenic 35.0%
! CGTTTTGTGGTACAATCATT+CGG - chr7_3:6754781-6754800 None:intergenic 35.0%
! CAGTAAAAATTTTGCCTAGC+CGG + chr7_3:6754821-6754840 Msa1091410:intron 35.0%
TGTGGCAAATTACTATTCCT+TGG - chr7_3:6754912-6754931 None:intergenic 35.0%
! AGTAATTTGCCACATCATTC+GGG + chr7_3:6754918-6754937 Msa1091410:intron 35.0%
! TGTGATGAATGTTGTTTAGG+GGG + chr7_3:6755168-6755187 Msa1091410:intron 35.0%
!! TTGGTTTGCTTTGCTGTTTA+TGG + chr7_3:6755330-6755349 Msa1091410:intron 35.0%
! TTTTGTCAACTAGATTCCCA+TGG - chr7_3:6755405-6755424 None:intergenic 35.0%
GGAATCTAGTTGACAAAAAG+AGG + chr7_3:6755407-6755426 Msa1091410:CDS 35.0%
GCTGATAAAAATGCGGTTAA+AGG + chr7_3:6755862-6755881 Msa1091410:CDS 35.0%
! CTCACCTGAATTTGACATTT+TGG - chr7_3:6756274-6756293 None:intergenic 35.0%
CAAAATGTCAAATTCAGGTG+AGG + chr7_3:6756272-6756291 Msa1091410:intron 35.0%
AGACTTAAAAAGTCTTCTGC+CGG - chr7_3:6756304-6756323 None:intergenic 35.0%
! ACAGATTCTGATTTGAATGC+TGG + chr7_3:6756379-6756398 Msa1091410:CDS 35.0%
! AGACTACTCTCTATTTGCTA+TGG + chr7_3:6756475-6756494 Msa1091410:CDS 35.0%
ACGATTCCAGTTATGATACA+TGG + chr7_3:6756646-6756665 Msa1091410:CDS 35.0%
CGATTCCAGTTATGATACAT+GGG + chr7_3:6756647-6756666 Msa1091410:CDS 35.0%
TACAAGTCAATAATGAGGAG+TGG - chr7_3:6756893-6756912 None:intergenic 35.0%
AACCATTAGAGGTGAAAGAA+GGG - chr7_3:6756922-6756941 None:intergenic 35.0%
AAACCATTAGAGGTGAAAGA+AGG - chr7_3:6756923-6756942 None:intergenic 35.0%
!! GACAGTTGATAAACCATTAG+AGG - chr7_3:6756933-6756952 None:intergenic 35.0%
TACTACTTCATGCTTGTCTA+GGG + chr7_3:6756975-6756994 Msa1091410:intron 35.0%
CACCACAAATAAAATCAGCT+TGG - chr7_3:6757001-6757020 None:intergenic 35.0%
!! CAAGCTGATTTTATTTGTGG+TGG + chr7_3:6756999-6757018 Msa1091410:CDS 35.0%
TTCTCCATGAGAACATACTT+AGG - chr7_3:6757140-6757159 None:intergenic 35.0%
!!! GACATTTTGAAATTTGCTGG+TGG + chr7_3:6757167-6757186 Msa1091410:CDS 35.0%
ATGAATTATCAAGCTCGGAT+GGG + chr7_3:6757227-6757246 Msa1091410:CDS 35.0%
! TTGTGCCCTTTTCTTAGATA+AGG + chr7_3:6757527-6757546 Msa1091410:intron 35.0%
GGGTTCCTTATCTAAGAAAA+GGG - chr7_3:6757535-6757554 None:intergenic 35.0%
TGGGTTCCTTATCTAAGAAA+AGG - chr7_3:6757536-6757555 None:intergenic 35.0%
TGTGAGCAAAAACAACATAC+CGG - chr7_3:6757696-6757715 None:intergenic 35.0%
ATTGCAATGAAAGATGTCAG+TGG + chr7_3:6757948-6757967 Msa1091410:intron 35.0%
! AACTGCATTTTGTCTTACTC+TGG + chr7_3:6758054-6758073 Msa1091410:intron 35.0%
GCATATTGTTACATGTCACA+TGG + chr7_3:6758112-6758131 Msa1091410:intron 35.0%
! CCAATTCAAGTTAGTGATGA+AGG - chr7_3:6758158-6758177 None:intergenic 35.0%
CCTTCATCACTAACTTGAAT+TGG + chr7_3:6758155-6758174 Msa1091410:intron 35.0%
! ATATGTTTCTACTCCAGAGA+TGG + chr7_3:6758187-6758206 Msa1091410:intron 35.0%
TCCAGAGATGGTGAATTATT+CGG + chr7_3:6758199-6758218 Msa1091410:intron 35.0%
GCTAGTTAAAGAAAACAAGG+TGG + chr7_3:6758438-6758457 Msa1091410:CDS 35.0%
! GATACACTCTTTTAACAGAC+GGG - chr7_3:6758471-6758490 None:intergenic 35.0%
CAAGACAGAATTAGTACCAA+CGG - chr7_3:6758508-6758527 None:intergenic 35.0%
! AGCATAATCTGGAACCTATA+TGG - chr7_3:6758587-6758606 None:intergenic 35.0%
ATGCTATGACATTTGTTCAC+GGG + chr7_3:6758602-6758621 Msa1091410:CDS 35.0%
! AAAGAGGTTTTACAATGGGA+GGG - chr7_3:6758856-6758875 None:intergenic 35.0%
! TAAAGAGGTTTTACAATGGG+AGG - chr7_3:6758857-6758876 None:intergenic 35.0%
TGAGAAATGTTATCGACCTT+AGG + chr7_3:6758892-6758911 Msa1091410:intron 35.0%
ATGCTAACATGATCATCCTA+AGG - chr7_3:6758911-6758930 None:intergenic 35.0%
ACAGGTCCAAACAAAAAACA+TGG - chr7_3:6758956-6758975 None:intergenic 35.0%
GCCTAGATATGGAATAACTT+TGG - chr7_3:6759044-6759063 None:intergenic 35.0%
GTTCAAACTGGTATCTTATC+TGG + chr7_3:6759172-6759191 Msa1091410:intron 35.0%
ATGAAGTTTACAGACAAGGA+TGG + chr7_3:6759308-6759327 Msa1091410:intron 35.0%
ATGTACCTGCACATTAAAGA+TGG - chr7_3:6759652-6759671 None:intergenic 35.0%
CAAACCTAATGTGTATCCAA+GGG - chr7_3:6759713-6759732 None:intergenic 35.0%
ACATTAGGTTTGGCAATTCT+AGG + chr7_3:6759721-6759740 Msa1091410:CDS 35.0%
AGACAACTTGGGTACTTAAA+GGG - chr7_3:6759778-6759797 None:intergenic 35.0%
TAGACAACTTGGGTACTTAA+AGG - chr7_3:6759779-6759798 None:intergenic 35.0%
ATCAACTACATCTAAAGGAC+GGG - chr7_3:6759803-6759822 None:intergenic 35.0%
CATCAACTACATCTAAAGGA+CGG - chr7_3:6759804-6759823 None:intergenic 35.0%
TTCTAGGCCCTGAATATTAT+TGG - chr7_3:6759917-6759936 None:intergenic 35.0%
CTTGCATAATCATCAGTTGT+AGG - chr7_3:6759957-6759976 None:intergenic 35.0%
CTGATGATTATGCAAGATTC+TGG + chr7_3:6759961-6759980 Msa1091410:three_prime_UTR 35.0%
!!! GCGTTTTTGAGGCATTGTTA+AGG - chr7_3:6753961-6753980 None:intergenic 40.0%
! GATTTACGAACGCGTTTTTG+AGG - chr7_3:6753972-6753991 None:intergenic 40.0%
TCGTTCCTCATTCTTCCAAA+CGG + chr7_3:6754009-6754028 Msa1091410:CDS 40.0%
TTCTTCCGTTTGGAAGAATG+AGG - chr7_3:6754017-6754036 None:intergenic 40.0%
!! TTGTTTGGCTTTCTTCCGTT+TGG - chr7_3:6754027-6754046 None:intergenic 40.0%
GAAGAAAGCCAAACAATCTC+CGG + chr7_3:6754031-6754050 Msa1091410:CDS 40.0%
TTCTTCAACCGGAGATTGTT+TGG - chr7_3:6754042-6754061 None:intergenic 40.0%
GAAACCAGTTCTTCTTCAAC+CGG - chr7_3:6754053-6754072 None:intergenic 40.0%
! TTCTTTTGTGCTTCATCAGC+CGG - chr7_3:6754155-6754174 None:intergenic 40.0%
! GTTTTGTAGTGAATCGAGTG+AGG + chr7_3:6754293-6754312 Msa1091410:intron 40.0%
! TGGGATTTTATATCAGCTGG+AGG + chr7_3:6754362-6754381 Msa1091410:CDS 40.0%
! GGAGGATAATGCTTTTGTCA+AGG + chr7_3:6754380-6754399 Msa1091410:CDS 40.0%
! TTCATTTCGCGAACGTTTTG+TGG - chr7_3:6754794-6754813 None:intergenic 40.0%
! CGGCTAGGCAAAATTTTTAC+TGG - chr7_3:6754823-6754842 None:intergenic 40.0%
AGAGAATGTGTATTCGCGAT+TGG - chr7_3:6754946-6754965 None:intergenic 40.0%
GGACTACATTGCTAAGATTG+TGG + chr7_3:6755204-6755223 Msa1091410:CDS 40.0%
TTCGGCTCTGTAAAACCATT+GGG - chr7_3:6755269-6755288 None:intergenic 40.0%
TTTCGGCTCTGTAAAACCAT+TGG - chr7_3:6755270-6755289 None:intergenic 40.0%
! GTTTTACAGAGCCGAAAACA+CGG + chr7_3:6755273-6755292 Msa1091410:CDS 40.0%
TGATTTGAATGTGTGTGTGC+AGG + chr7_3:6755369-6755388 Msa1091410:intron 40.0%
! CTACATGAAGCACTTACATC+AGG - chr7_3:6755508-6755527 None:intergenic 40.0%
TTTGGCAGCTGTATCAATCA+GGG - chr7_3:6755788-6755807 None:intergenic 40.0%
! TTTTGGCAGCTGTATCAATC+AGG - chr7_3:6755789-6755808 None:intergenic 40.0%
TTTATCAGCTGCATGGACAT+TGG - chr7_3:6755851-6755870 None:intergenic 40.0%
CCATGCAGCTGATAAAAATG+CGG + chr7_3:6755855-6755874 Msa1091410:CDS 40.0%
AAGAATGTAATAGGCCTGAG+TGG + chr7_3:6755902-6755921 Msa1091410:CDS 40.0%
AAATCCAGTAAAGTCCACTC+AGG - chr7_3:6755919-6755938 None:intergenic 40.0%
!! TGCTTTGGAGCATCTATTTC+TGG + chr7_3:6755973-6755992 Msa1091410:CDS 40.0%
TTCTGGCATTAAGCTTGTCA+CGG + chr7_3:6755990-6756009 Msa1091410:CDS 40.0%
CAAAACGTACGTGAGTTTCT+GGG - chr7_3:6756166-6756185 None:intergenic 40.0%
!! CCTGGTTTTTCATCTTCGTT+GGG - chr7_3:6756505-6756524 None:intergenic 40.0%
!! TCCTGGTTTTTCATCTTCGT+TGG - chr7_3:6756506-6756525 None:intergenic 40.0%
!! CCTACTCTGAAATATAGTCC+TGG - chr7_3:6756523-6756542 None:intergenic 40.0%
CCAGGACTATATTTCAGAGT+AGG + chr7_3:6756520-6756539 Msa1091410:intron 40.0%
! AATCTTTCAGGTGCAATGGA+AGG + chr7_3:6756620-6756639 Msa1091410:intron 40.0%
! ATCTTTCAGGTGCAATGGAA+GGG + chr7_3:6756621-6756640 Msa1091410:intron 40.0%
ATATACCTCAAGCCCTCAAT+GGG - chr7_3:6756675-6756694 None:intergenic 40.0%
AATATACCTCAAGCCCTCAA+TGG - chr7_3:6756676-6756695 None:intergenic 40.0%
ACCATTAGAGGTGAAAGAAG+GGG - chr7_3:6756921-6756940 None:intergenic 40.0%
GTACTACTTCATGCTTGTCT+AGG + chr7_3:6756974-6756993 Msa1091410:intron 40.0%
!! GGCCAAGCTGATTTTATTTG+TGG + chr7_3:6756996-6757015 Msa1091410:CDS 40.0%
AAACCACTAACACCTTGACA+AGG - chr7_3:6757029-6757048 None:intergenic 40.0%
TTAGTGGTTTCAATCGCTTC+AGG + chr7_3:6757039-6757058 Msa1091410:CDS 40.0%
CAGGAACAAAAATGCTCCAT+TGG + chr7_3:6757058-6757077 Msa1091410:CDS 40.0%
GAACAAAAATGCTCCATTGG+AGG + chr7_3:6757061-6757080 Msa1091410:CDS 40.0%
GAAGCCTAAGTATGTTCTCA+TGG + chr7_3:6757133-6757152 Msa1091410:CDS 40.0%
!! AAATTTGCTGGTGGGTTTCT+GGG + chr7_3:6757176-6757195 Msa1091410:CDS 40.0%
GATAATTCATGGCCACTAGA+CGG - chr7_3:6757217-6757236 None:intergenic 40.0%
TGGCCATGAATTATCAAGCT+CGG + chr7_3:6757222-6757241 Msa1091410:CDS 40.0%
! CATCCGAGCTTGATAATTCA+TGG - chr7_3:6757228-6757247 None:intergenic 40.0%
CATGAATTATCAAGCTCGGA+TGG + chr7_3:6757226-6757245 Msa1091410:CDS 40.0%
CATATGGCCTTCCTCAATTT+CGG + chr7_3:6757267-6757286 Msa1091410:CDS 40.0%
AAAACACGCATCCGAAATTG+AGG - chr7_3:6757281-6757300 None:intergenic 40.0%
! TTCGGATGCGTGTTTTTCTT+TGG + chr7_3:6757285-6757304 Msa1091410:CDS 40.0%
! TCGGATGCGTGTTTTTCTTT+GGG + chr7_3:6757286-6757305 Msa1091410:CDS 40.0%
! GAGCTCTAACTACTGAAGTA+AGG + chr7_3:6757309-6757328 Msa1091410:intron 40.0%
!! TGAGTTGGTAACGGATATGA+GGG - chr7_3:6757441-6757460 None:intergenic 40.0%
!! ATGAGTTGGTAACGGATATG+AGG - chr7_3:6757442-6757461 None:intergenic 40.0%
ATATCCGTTACCAACTCATG+AGG + chr7_3:6757443-6757462 Msa1091410:CDS 40.0%
!! TCAACCTCATGAGTTGGTAA+CGG - chr7_3:6757450-6757469 None:intergenic 40.0%
! CAGCTGACACTTTTCATTAG+TGG - chr7_3:6757631-6757650 None:intergenic 40.0%
!! CACTAATGAAAAGTGTCAGC+TGG + chr7_3:6757629-6757648 Msa1091410:CDS 40.0%
AGCAAAAACAACATACCGGT+GGG - chr7_3:6757692-6757711 None:intergenic 40.0%
AGCGATGATGAAAAGAGCTA+CGG + chr7_3:6757811-6757830 Msa1091410:CDS 40.0%
TGATCATACAGCATACCACT+TGG - chr7_3:6758242-6758261 None:intergenic 40.0%
GCAAACTCTCTCATAGTCAT+CGG - chr7_3:6758285-6758304 None:intergenic 40.0%
AGATATGGAACCTTCTCCTT+TGG - chr7_3:6758314-6758333 None:intergenic 40.0%
! TTGTGCTTGCTTGCCTTTTT+AGG + chr7_3:6758387-6758406 Msa1091410:intron 40.0%
! TGTGCTTGCTTGCCTTTTTA+GGG + chr7_3:6758388-6758407 Msa1091410:intron 40.0%
!! TTTTTAGGGGGCAAACTTCA+GGG + chr7_3:6758402-6758421 Msa1091410:intron 40.0%
! TCTAAAATCTGGAAAGCCGT+TGG + chr7_3:6758489-6758508 Msa1091410:CDS 40.0%
GTGTATCTGCTGAATACAAC+AGG + chr7_3:6758705-6758724 Msa1091410:intron 40.0%
TTGTGTCCACTGTTGTAACA+AGG + chr7_3:6758756-6758775 Msa1091410:CDS 40.0%
TGTGTCCACTGTTGTAACAA+GGG + chr7_3:6758757-6758776 Msa1091410:CDS 40.0%
CGAATAACAACCTGGTTATG+AGG - chr7_3:6758788-6758807 None:intergenic 40.0%
CACAACTTCGAATAACAACC+TGG - chr7_3:6758796-6758815 None:intergenic 40.0%
GAATGCTAAGAACTCTGTCT+TGG - chr7_3:6759082-6759101 None:intergenic 40.0%
TTAGCATTCGAGAGAATGCA+AGG + chr7_3:6759093-6759112 Msa1091410:CDS 40.0%
ACACATACCTCTGTTTGACA+GGG - chr7_3:6759154-6759173 None:intergenic 40.0%
AACACATACCTCTGTTTGAC+AGG - chr7_3:6759155-6759174 None:intergenic 40.0%
! ACAGAGGTATGTGTTCAAAC+TGG + chr7_3:6759160-6759179 Msa1091410:intron 40.0%
ACTGCTCAATAACTCTCCTA+AGG + chr7_3:6759452-6759471 Msa1091410:intron 40.0%
CTGCTCAATAACTCTCCTAA+GGG + chr7_3:6759453-6759472 Msa1091410:intron 40.0%
AAATTCTGGACTGATCCCTT+AGG - chr7_3:6759471-6759490 None:intergenic 40.0%
! GGGATCAGTCCAGAATTTTT+AGG + chr7_3:6759473-6759492 Msa1091410:intron 40.0%
TAATGTGTATCCAAGGGCAA+GGG - chr7_3:6759707-6759726 None:intergenic 40.0%
CCAAACCTAATGTGTATCCA+AGG - chr7_3:6759714-6759733 None:intergenic 40.0%
CCTTGGATACACATTAGGTT+TGG + chr7_3:6759711-6759730 Msa1091410:CDS 40.0%
TTAAAGGGGAGAGTTGTCAA+AGG - chr7_3:6759763-6759782 None:intergenic 40.0%
GACAACTTGGGTACTTAAAG+GGG - chr7_3:6759777-6759796 None:intergenic 40.0%
! AGGAACGACTTCGTCTTGTT+TGG - chr7_3:6753997-6754016 None:intergenic 45.0%
ATCTCCGGTTGAAGAAGAAC+TGG + chr7_3:6754046-6754065 Msa1091410:CDS 45.0%
CTTCGTCGGAGAACTTATTC+CGG + chr7_3:6754133-6754152 Msa1091410:CDS 45.0%
CACAAAAGAAATGGCCTCAC+CGG + chr7_3:6754165-6754184 Msa1091410:CDS 45.0%
CTCACTCGTTCTTAGTGTAC+CGG - chr7_3:6754187-6754206 None:intergenic 45.0%
GTTTCACTATCGTGAAGCGA+AGG + chr7_3:6754335-6754354 Msa1091410:CDS 45.0%
TATCGTGAAGCGAAGGTTGA+TGG + chr7_3:6754342-6754361 Msa1091410:CDS 45.0%
! ATCGTGAAGCGAAGGTTGAT+GGG + chr7_3:6754343-6754362 Msa1091410:CDS 45.0%
TTTGCCTAGCCGGAAATCAT+AGG + chr7_3:6754831-6754850 Msa1091410:intron 45.0%
TTGCCTAGCCGGAAATCATA+GGG + chr7_3:6754832-6754851 Msa1091410:intron 45.0%
! GATGAATGTTGTTTAGGGGG+AGG + chr7_3:6755171-6755190 Msa1091410:intron 45.0%
! AATGTTGTTTAGGGGGAGGA+AGG + chr7_3:6755175-6755194 Msa1091410:intron 45.0%
TGTGTGTGTGCAGGTGATTA+AGG + chr7_3:6755378-6755397 Msa1091410:intron 45.0%
TGCAGGTGATTAAGGACCAT+GGG + chr7_3:6755386-6755405 Msa1091410:intron 45.0%
! CCGCATTTTTATCAGCTGCA+TGG - chr7_3:6755858-6755877 None:intergenic 45.0%
CTGGATTTGTATTCTGGGTG+TGG + chr7_3:6755931-6755950 Msa1091410:CDS 45.0%
!! ATGTCCACTGGTCTTTGCTT+TGG + chr7_3:6755958-6755977 Msa1091410:CDS 45.0%
CCAAAACGTACGTGAGTTTC+TGG - chr7_3:6756167-6756186 None:intergenic 45.0%
! CCAGAAACTCACGTACGTTT+TGG + chr7_3:6756164-6756183 Msa1091410:intron 45.0%
AATTCAGGTGAGGAATGAGC+CGG + chr7_3:6756282-6756301 Msa1091410:intron 45.0%
TTGAATGCTGGTGAAGAAGC+TGG + chr7_3:6756391-6756410 Msa1091410:CDS 45.0%
AGATGATTCACCTGACTCTG+AGG + chr7_3:6756438-6756457 Msa1091410:CDS 45.0%
!! ACCTGACTCTGAGGTATTTG+AGG + chr7_3:6756447-6756466 Msa1091410:CDS 45.0%
ACCTCAAATACCTCAGAGTC+AGG - chr7_3:6756451-6756470 None:intergenic 45.0%
CCCAACGAAGATGAAAAACC+AGG + chr7_3:6756502-6756521 Msa1091410:CDS 45.0%
ACCCCTTCTTTCACCTCTAA+TGG + chr7_3:6756917-6756936 Msa1091410:intron 45.0%
!! GAAATTTGCTGGTGGGTTTC+TGG + chr7_3:6757175-6757194 Msa1091410:CDS 45.0%
!! AATTTGCTGGTGGGTTTCTG+GGG + chr7_3:6757177-6757196 Msa1091410:CDS 45.0%
! CGGATGCGTGTTTTTCTTTG+GGG + chr7_3:6757287-6757306 Msa1091410:CDS 45.0%
CTGGATTCAACCTCATGAGT+TGG - chr7_3:6757456-6757475 None:intergenic 45.0%
! TGGCCAAGGCATTATACCTT+GGG + chr7_3:6757649-6757668 Msa1091410:CDS 45.0%
GAGCAAAAACAACATACCGG+TGG - chr7_3:6757693-6757712 None:intergenic 45.0%
GCGATGATGAAAAGAGCTAC+GGG + chr7_3:6757812-6757831 Msa1091410:CDS 45.0%
ATGCAGTTCATATATGCGGC+TGG - chr7_3:6758042-6758061 None:intergenic 45.0%
GCCGAATAATTCACCATCTC+TGG - chr7_3:6758203-6758222 None:intergenic 45.0%
GAGAGTTTGCCACATTCCAA+AGG + chr7_3:6758295-6758314 Msa1091410:CDS 45.0%
TTGCCACATTCCAAAGGAGA+AGG + chr7_3:6758301-6758320 Msa1091410:CDS 45.0%
!! GAACCTTCTCCTTTGGAATG+TGG - chr7_3:6758307-6758326 None:intergenic 45.0%
! GTGCTTGCTTGCCTTTTTAG+GGG + chr7_3:6758389-6758408 Msa1091410:intron 45.0%
!! TGCTTGCTTGCCTTTTTAGG+GGG + chr7_3:6758390-6758409 Msa1091410:intron 45.0%
CTGAAGTTTGCCCCCTAAAA+AGG - chr7_3:6758403-6758422 None:intergenic 45.0%
!! CTTTTTAGGGGGCAAACTTC+AGG + chr7_3:6758401-6758420 Msa1091410:intron 45.0%
GCTGAATACAACAGGCCATT+TGG + chr7_3:6758713-6758732 Msa1091410:intron 45.0%
AACAACCTGGTTATGAGGCT+CGG - chr7_3:6758783-6758802 None:intergenic 45.0%
GTTTGGACCTGTTGTGTAAG+TGG + chr7_3:6758964-6758983 Msa1091410:intron 45.0%
! AGTACTGCCACTTACACAAC+AGG - chr7_3:6758974-6758993 None:intergenic 45.0%
GATGGAGAAGAGCCTAGATA+TGG - chr7_3:6759055-6759074 None:intergenic 45.0%
CTAAGAACTCTGTCTTGGTC+TGG - chr7_3:6759077-6759096 None:intergenic 45.0%
CCACAAAGCTTATAGCAGTC+TGG - chr7_3:6759131-6759150 None:intergenic 45.0%
CCAGACTGCTATAAGCTTTG+TGG + chr7_3:6759128-6759147 Msa1091410:CDS 45.0%
ATGTGCAGGTACATGCAAGT+TGG + chr7_3:6759658-6759677 Msa1091410:intron 45.0%
CTAATGTGTATCCAAGGGCA+AGG - chr7_3:6759708-6759727 None:intergenic 45.0%
CTTGCCCTTGGATACACATT+AGG + chr7_3:6759706-6759725 Msa1091410:CDS 45.0%
!! ATTCTAGGACTCTCCGATGA+CGG + chr7_3:6759736-6759755 Msa1091410:CDS 45.0%
AGTTGTCAAAGGACCGTCAT+CGG - chr7_3:6759752-6759771 None:intergenic 45.0%
! GAGCGGGTTCAACAAAAGTG+CGG + chr7_3:6753787-6753806 Msa1091410:five_prime_UTR 50.0%
! AGCGGGTTCAACAAAAGTGC+GGG + chr7_3:6753788-6753807 Msa1091410:five_prime_UTR 50.0%
! TCGTTCTTAGTGTACCGGTG+AGG - chr7_3:6754182-6754201 None:intergenic 50.0%
ACCCACCACCCTATGATTTC+CGG - chr7_3:6754843-6754862 None:intergenic 50.0%
! CGATTGGTTCCCGAATGATG+TGG - chr7_3:6754930-6754949 None:intergenic 50.0%
TTAGGGGGAGGAAGGAAAAG+AGG + chr7_3:6755183-6755202 Msa1091410:intron 50.0%
GTGCAGGTGATTAAGGACCA+TGG + chr7_3:6755385-6755404 Msa1091410:intron 50.0%
! TAGGCCTGAGTGGACTTTAC+TGG + chr7_3:6755912-6755931 Msa1091410:CDS 50.0%
TGCTCCAAAGCAAAGACCAG+TGG - chr7_3:6755965-6755984 None:intergenic 50.0%
GAAGAAGCTGGTGAAGAAGC+TGG + chr7_3:6756403-6756422 Msa1091410:CDS 50.0%
GGGCTCCCATGTATCATAAC+TGG - chr7_3:6756655-6756674 None:intergenic 50.0%
TGATACATGGGAGCCCATTG+AGG + chr7_3:6756659-6756678 Msa1091410:CDS 50.0%
GATACATGGGAGCCCATTGA+GGG + chr7_3:6756660-6756679 Msa1091410:CDS 50.0%
GTGGTGAGACTTACAGGAAG+AGG - chr7_3:6756874-6756893 None:intergenic 50.0%
TGAGGAGTGGTGAGACTTAC+AGG - chr7_3:6756880-6756899 None:intergenic 50.0%
CCACTAACACCTTGACAAGG+TGG - chr7_3:6757026-6757045 None:intergenic 50.0%
! CCACCTTGTCAAGGTGTTAG+TGG + chr7_3:6757023-6757042 Msa1091410:CDS 50.0%
!! TTTCTGGGGCGTTATGCTGT+AGG + chr7_3:6757191-6757210 Msa1091410:CDS 50.0%
TTATGCTGTAGGCCGTCTAG+TGG + chr7_3:6757202-6757221 Msa1091410:CDS 50.0%
TCAAGCTCGGATGGGAATGA+TGG + chr7_3:6757235-6757254 Msa1091410:CDS 50.0%
ATGATGGCTGCAGGGTCATA+TGG + chr7_3:6757251-6757270 Msa1091410:CDS 50.0%
CACGCATCCGAAATTGAGGA+AGG - chr7_3:6757277-6757296 None:intergenic 50.0%
CTCAGTAGGGATGACTGATC+TGG - chr7_3:6757475-6757494 None:intergenic 50.0%
!! TGAAAAGTGTCAGCTGGCCA+AGG + chr7_3:6757635-6757654 Msa1091410:CDS 50.0%
! CTGGCCAAGGCATTATACCT+TGG + chr7_3:6757648-6757667 Msa1091410:CDS 50.0%
! GGCCAAGGCATTATACCTTG+GGG + chr7_3:6757650-6757669 Msa1091410:CDS 50.0%
GTCCCCAAGGTATAATGCCT+TGG - chr7_3:6757655-6757674 None:intergenic 50.0%
GATCATCAATTGCGTCCCCA+AGG - chr7_3:6757668-6757687 None:intergenic 50.0%
! CGCAATTGATGATCTCCCAC+CGG + chr7_3:6757674-6757693 Msa1091410:CDS 50.0%
GACTCTCAAAGTGCACCAAG+TGG + chr7_3:6758224-6758243 Msa1091410:CDS 50.0%
CTTTAACTAGCACACCCTCG+AGG - chr7_3:6758429-6758448 None:intergenic 50.0%
! ACAGGCCATTTGGTCGACTT+TGG + chr7_3:6758723-6758742 Msa1091410:intron 50.0%
! GCCATTTGGTCGACTTTGGT+GGG + chr7_3:6758727-6758746 Msa1091410:CDS 50.0%
TCCCACCAAAGTCGACCAAA+TGG - chr7_3:6758731-6758750 None:intergenic 50.0%
GAGGGTAGCATAAGTGGCAT+TGG - chr7_3:6758838-6758857 None:intergenic 50.0%
CAATGGGAGGGTAGCATAAG+TGG - chr7_3:6758844-6758863 None:intergenic 50.0%
GAACTCTGTCTTGGTCTGGA+TGG - chr7_3:6759073-6759092 None:intergenic 50.0%
CGAGAGAATGCAAGGCTACA+AGG + chr7_3:6759101-6759120 Msa1091410:CDS 50.0%
TTTGTGGCCCTGTCAAACAG+AGG + chr7_3:6759144-6759163 Msa1091410:CDS 50.0%
!! AAGGACGGGCTAGACAACTT+GGG - chr7_3:6759789-6759808 None:intergenic 50.0%
!! AAAGGACGGGCTAGACAACT+TGG - chr7_3:6759790-6759809 None:intergenic 50.0%
TCCGACGATGCATGCTTCGT+CGG + chr7_3:6754119-6754138 Msa1091410:CDS 55.0%
TCCGACGAAGCATGCATCGT+CGG - chr7_3:6754123-6754142 None:intergenic 55.0%
CCACCCTATGATTTCCGGCT+AGG - chr7_3:6754838-6754857 None:intergenic 55.0%
CCTAGCCGGAAATCATAGGG+TGG + chr7_3:6754835-6754854 Msa1091410:intron 55.0%
AGCCGGAAATCATAGGGTGG+TGG + chr7_3:6754838-6754857 Msa1091410:intron 55.0%
GCCGGAAATCATAGGGTGGT+GGG + chr7_3:6754839-6754858 Msa1091410:intron 55.0%
TGACTTGAAGAGATGGGCCG+TGG + chr7_3:6756100-6756119 Msa1091410:intron 55.0%
GGATGGGAATGATGGCTGCA+GGG + chr7_3:6757243-6757262 Msa1091410:CDS 55.0%
GCAAACTTCAGGGACCTCGA+GGG + chr7_3:6758412-6758431 Msa1091410:CDS 55.0%
! GGCCATTTGGTCGACTTTGG+TGG + chr7_3:6758726-6758745 Msa1091410:intron 55.0%
CTCGGCCCTTGTTACAACAG+TGG - chr7_3:6758765-6758784 None:intergenic 55.0%
TATCCAAGGGCAAGGGCAAC+AGG - chr7_3:6759700-6759719 None:intergenic 55.0%
GGGTGTGGAGCTATGTCCAC+TGG + chr7_3:6755946-6755965 Msa1091410:CDS 60.0%
!! TGTGGTGGGCCACCTTGTCA+AGG + chr7_3:6757014-6757033 Msa1091410:CDS 60.0%
CGGATGGGAATGATGGCTGC+AGG + chr7_3:6757242-6757261 Msa1091410:CDS 60.0%
GGCAAACTTCAGGGACCTCG+AGG + chr7_3:6758411-6758430 Msa1091410:CDS 60.0%
AAGGGCCGAGCCTCATAACC+AGG + chr7_3:6758775-6758794 Msa1091410:CDS 60.0%
GTTCCTGTTGCCCTTGCCCT+TGG + chr7_3:6759694-6759713 Msa1091410:CDS 60.0%
GGGAGCCCATTGAGGGCTTG+AGG + chr7_3:6756667-6756686 Msa1091410:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 6753779 6760079 6753779 ID=Msa1091410;Name=Msa1091410
chr7_3 mRNA 6753779 6760079 6753779 ID=Msa1091410-mRNA-1;Parent=Msa1091410;Name=Msa1091410-mRNA-1;_AED=0.14;_eAED=0.14;_QI=187|1|1|1|1|1|20|239|831
chr7_3 exon 6753779 6754201 6753779 ID=Msa1091410-mRNA-1:exon:2078;Parent=Msa1091410-mRNA-1
chr7_3 exon 6754302 6754401 6754302 ID=Msa1091410-mRNA-1:exon:2079;Parent=Msa1091410-mRNA-1
chr7_3 exon 6755187 6755294 6755187 ID=Msa1091410-mRNA-1:exon:2080;Parent=Msa1091410-mRNA-1
chr7_3 exon 6755391 6755510 6755391 ID=Msa1091410-mRNA-1:exon:2081;Parent=Msa1091410-mRNA-1
chr7_3 exon 6755604 6755694 6755604 ID=Msa1091410-mRNA-1:exon:2082;Parent=Msa1091410-mRNA-1
chr7_3 exon 6755800 6756011 6755800 ID=Msa1091410-mRNA-1:exon:2083;Parent=Msa1091410-mRNA-1
chr7_3 exon 6756110 6756175 6756110 ID=Msa1091410-mRNA-1:exon:2084;Parent=Msa1091410-mRNA-1
chr7_3 exon 6756289 6756537 6756289 ID=Msa1091410-mRNA-1:exon:2085;Parent=Msa1091410-mRNA-1
chr7_3 exon 6756630 6756688 6756630 ID=Msa1091410-mRNA-1:exon:2086;Parent=Msa1091410-mRNA-1
chr7_3 exon 6756813 6756879 6756813 ID=Msa1091410-mRNA-1:exon:2087;Parent=Msa1091410-mRNA-1
chr7_3 exon 6756996 6757325 6756996 ID=Msa1091410-mRNA-1:exon:2088;Parent=Msa1091410-mRNA-1
chr7_3 exon 6757432 6757500 6757432 ID=Msa1091410-mRNA-1:exon:2089;Parent=Msa1091410-mRNA-1
chr7_3 exon 6757609 6757695 6757609 ID=Msa1091410-mRNA-1:exon:2090;Parent=Msa1091410-mRNA-1
chr7_3 exon 6757796 6757883 6757796 ID=Msa1091410-mRNA-1:exon:2091;Parent=Msa1091410-mRNA-1
chr7_3 exon 6758204 6758322 6758204 ID=Msa1091410-mRNA-1:exon:2092;Parent=Msa1091410-mRNA-1
chr7_3 exon 6758409 6758510 6758409 ID=Msa1091410-mRNA-1:exon:2093;Parent=Msa1091410-mRNA-1
chr7_3 exon 6758592 6758635 6758592 ID=Msa1091410-mRNA-1:exon:2094;Parent=Msa1091410-mRNA-1
chr7_3 exon 6758727 6758796 6758727 ID=Msa1091410-mRNA-1:exon:2095;Parent=Msa1091410-mRNA-1
chr7_3 exon 6759062 6759165 6759062 ID=Msa1091410-mRNA-1:exon:2096;Parent=Msa1091410-mRNA-1
chr7_3 exon 6759666 6760079 6759666 ID=Msa1091410-mRNA-1:exon:2097;Parent=Msa1091410-mRNA-1
chr7_3 five_prime_UTR 6753779 6753965 6753779 ID=Msa1091410-mRNA-1:five_prime_utr;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6753966 6754201 6753966 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6754302 6754401 6754302 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6755187 6755294 6755187 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6755391 6755510 6755391 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6755604 6755694 6755604 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6755800 6756011 6755800 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6756110 6756175 6756110 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6756289 6756537 6756289 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6756630 6756688 6756630 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6756813 6756879 6756813 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6756996 6757325 6756996 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6757432 6757500 6757432 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6757609 6757695 6757609 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6757796 6757883 6757796 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6758204 6758322 6758204 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6758409 6758510 6758409 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6758592 6758635 6758592 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6758727 6758796 6758727 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6759062 6759165 6759062 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 CDS 6759666 6759840 6759666 ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1
chr7_3 three_prime_UTR 6759841 6760079 6759841 ID=Msa1091410-mRNA-1:three_prime_utr;Parent=Msa1091410-mRNA-1
Gene Sequence

>Msa1091410

ATGCCTCAAAAACGCGTTCGTAAATCTTCCAAACAAGACGAAGTCGTTCCTCATTCTTCCAAACGGAAGAAAGCCAAACAATCTCCGGTTGAAGAAGAACTGGTTTCGCTTCTTCCTTCTAGAAGAAAGAAATCGAAGCAATCTTCGGTTAATTCCGACGATGCATGCTTCGTCGGAGAACTTATTCCGGCTGATGAAGCACAAAAGAAATGGCCTCACCGGTACACTAAGAACGATGAATCGAGTGAGGATGAACGTTTGAAAGCGAAGTTTCACTATCGTGAAGCGAAGGTTGATGGGATTTTATATCAGCTGGAGGATAATGCTTTTGTCAAGGGGGAGGAAGGAAAAGAGGACTACATTGCTAAGATTGTGGAGATGTTTGAAACTCCTGATGAAGAACAATATTTTACTGCCCAATGGTTTTACAGAGCCGAAAACACGGTGATTAAGGACCATGGGAATCTAGTTGACAAAAAGAGGATTTTCATATCTGATGTAAAAGATGAAAATCCTTTAGATTGTTTAGTTAGGAAAGTTAACATTGTACAAATTTCTCCTGATGCTGCAAAAAAGAAGAAAATTCCTCCTTGTGAATTCTATTTTGACATGAAGTACACTGTGCCCTATATAACTTTCTCAAATGTTGACAATGCTGCCAAAATAGAAAGTGAGACTTCAACACTTTCAAATGAATCTGGGTCCAATGTCCATGCAGCTGATAAAAATGCGGTTAAAGGAAAATCAAGTCAAATTAAAGAATGTAATAGGCCTGAGTGGACTTTACTGGATTTGTATTCTGGGTGTGGAGCTATGTCCACTGGTCTTTGCTTTGGAGCATCTATTTCTGGCATTAAGCTTGTCACGAGATGGGCCGTGGATATAAATGAATATGCATGTGAGAGTCTCAAGCTGAATCACCCAGAAACTCACGTGAGGAATGAGCCGGCAGAAGACTTTTTAAGTCTACTGAAAGAGTGGGCTAAACTCTGTGAGAAGTTTGTACTAAATGGAGCAGAAAGTACAGATTCTGATTTGAATGCTGGTGAAGAAGCTGGTGAAGAAGCTGGTGATGAAGCTACAGATGATTCACCTGACTCTGAGGTATTTGAGGTTGAAAGACTACTCTCTATTTGCTATGGCGATCCCAACGAAGATGAAAAACCAGGACTATATTTCAGAGTGCAATGGAAGGGTTACGATTCCAGTTATGATACATGGGAGCCCATTGAGGGCTTGAGCGAGTGTAAAGATGCTATGAAAGATTTTGTTATAAATGGATATAAGGACAAGATATTGCCTCTTCCTGGCCAAGCTGATTTTATTTGTGGTGGGCCACCTTGTCAAGGTGTTAGTGGTTTCAATCGCTTCAGGAACAAAAATGCTCCATTGGAGGATGAAAAAAATCAGCAACTAATTGTTTACATGGACATCATCAATTTCTTGAAGCCTAAGTATGTTCTCATGGAGAACGTTGTTGACATTTTGAAATTTGCTGGTGGGTTTCTGGGGCGTTATGCTGTAGGCCGTCTAGTGGCCATGAATTATCAAGCTCGGATGGGAATGATGGCTGCAGGGTCATATGGCCTTCCTCAATTTCGGATGCGTGTTTTTCTTTGGGGAGCTCTAACTACTGAAAAATTACCCTCATATCCGTTACCAACTCATGAGGTTGAATCCAGATCAGTCATCCCTACTGAGTTTGAAGCAATAACAGTTGCATATTCCACTAATGAAAAGTGTCAGCTGGCCAAGGCATTATACCTTGGGGACGCAATTGATGATCTCCCACCGGTTGAAAATGATGATAGCGATGATGAAAAGAGCTACGGGACTACTCCTCGTACTGATTTTCAAAACTATATCAGATTAAAGAGAAGTGAGATGGTGAATTATTCGGCTGACTCTCAAAGTGCACCAAGTGGTATGCTGTATGATCATAGACCTTTGAAATTAAACACCGATGACTATGAGAGAGTTTGCCACATTCCAAAGGAGAAGGGGGCAAACTTCAGGGACCTCGAGGGTGTGCTAGTTAAAGAAAACAAGGTGGAATGGGACCCGTCTGTTAAAAGAGTGTATCTAAAATCTGGAAAGCCGTTGGTTCCAGATTATGCTATGACATTTGTTCACGGGACCTCCTCTAAGCCATTTGGTCGACTTTGGTGGGATGAAATTGTGTCCACTGTTGTAACAAGGGCCGAGCCTCATAACCAGGCTCTTCTCCATCCAGACCAAGACAGAGTTCTTAGCATTCGAGAGAATGCAAGGCTACAAGGATTTCCAGACTGCTATAAGCTTTGTGGCCCTGTCAAACAGAGGTACATGCAAGTTGGAAACGCAGTTGCTGTTCCTGTTGCCCTTGCCCTTGGATACACATTAGGTTTGGCAATTCTAGGACTCTCCGATGACGGTCCTTTGACAACTCTCCCCTTTAAGTACCCAAGTTGTCTAGCCCGTCCTTTAGATGTAGTTGATGATGATGGTTCAAGTTGA

Protein sequence

>Msa1091410

MPQKRVRKSSKQDEVVPHSSKRKKAKQSPVEEELVSLLPSRRKKSKQSSVNSDDACFVGELIPADEAQKKWPHRYTKNDESSEDERLKAKFHYREAKVDGILYQLEDNAFVKGEEGKEDYIAKIVEMFETPDEEQYFTAQWFYRAENTVIKDHGNLVDKKRIFISDVKDENPLDCLVRKVNIVQISPDAAKKKKIPPCEFYFDMKYTVPYITFSNVDNAAKIESETSTLSNESGSNVHAADKNAVKGKSSQIKECNRPEWTLLDLYSGCGAMSTGLCFGASISGIKLVTRWAVDINEYACESLKLNHPETHVRNEPAEDFLSLLKEWAKLCEKFVLNGAESTDSDLNAGEEAGEEAGDEATDDSPDSEVFEVERLLSICYGDPNEDEKPGLYFRVQWKGYDSSYDTWEPIEGLSECKDAMKDFVINGYKDKILPLPGQADFICGGPPCQGVSGFNRFRNKNAPLEDEKNQQLIVYMDIINFLKPKYVLMENVVDILKFAGGFLGRYAVGRLVAMNYQARMGMMAAGSYGLPQFRMRVFLWGALTTEKLPSYPLPTHEVESRSVIPTEFEAITVAYSTNEKCQLAKALYLGDAIDDLPPVENDDSDDEKSYGTTPRTDFQNYIRLKRSEMVNYSADSQSAPSGMLYDHRPLKLNTDDYERVCHIPKEKGANFRDLEGVLVKENKVEWDPSVKRVYLKSGKPLVPDYAMTFVHGTSSKPFGRLWWDEIVSTVVTRAEPHNQALLHPDQDRVLSIRENARLQGFPDCYKLCGPVKQRYMQVGNAVAVPVALALGYTLGLAILGLSDDGPLTTLPFKYPSCLARPLDVVDDDGSS*