Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1091410 | XP_013447447.1 | 94.224 | 831 | 44 | 1 | 1 | 831 | 1 | 827 | 0.0 | 1592 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1091410 | sp|Q9AXT8|CMT1_MAIZE | 55.000 | 780 | 311 | 12 | 57 | 820 | 137 | 892 | 0.0 | 863 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1091410 | G7ZY08 | 94.224 | 831 | 44 | 1 | 1 | 831 | 1 | 827 | 0.0 | 1592 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0062340 | Msa1091410 | 0.800115 | 1.676590e-48 | -8.615850e-47 |
Msa0606100 | Msa1091410 | 0.819639 | 1.045006e-52 | -8.615850e-47 |
Msa0620500 | Msa1091410 | 0.800669 | 1.293309e-48 | -8.615850e-47 |
Msa0647050 | Msa1091410 | 0.811708 | 6.114876e-51 | -8.615850e-47 |
Msa0717830 | Msa1091410 | 0.802871 | 4.566504e-49 | -8.615850e-47 |
Msa0758590 | Msa1091410 | 0.803849 | 2.865175e-49 | -8.615850e-47 |
Msa0800660 | Msa1091410 | 0.805372 | 1.377921e-49 | -8.615850e-47 |
Msa0127680 | Msa1091410 | 0.801221 | 9.973623e-49 | -8.615850e-47 |
Msa0159590 | Msa1091410 | 0.806623 | 7.519498e-50 | -8.615850e-47 |
Msa0421750 | Msa1091410 | 0.803237 | 3.835915e-49 | -8.615850e-47 |
Msa0439080 | Msa1091410 | 0.887641 | 1.193946e-72 | -8.615850e-47 |
Msa1008680 | Msa1091410 | 0.824181 | 9.274775e-54 | -8.615850e-47 |
Msa1033920 | Msa1091410 | 0.809221 | 2.106568e-50 | -8.615850e-47 |
Msa1047380 | Msa1091410 | 0.874143 | 8.501215e-68 | -8.615850e-47 |
Msa1076020 | Msa1091410 | 0.807810 | 4.213748e-50 | -8.615850e-47 |
Msa1091410 | Msa1127280 | 0.820098 | 8.206182e-53 | -8.615850e-47 |
Msa1091410 | Msa1134790 | 0.888019 | 8.553187e-73 | -8.615850e-47 |
Msa1091410 | Msa1139050 | 0.828563 | 8.384806e-55 | -8.615850e-47 |
Msa1091410 | Msa1162880 | 0.815324 | 9.799122e-52 | -8.615850e-47 |
Msa1091410 | Msa1165480 | 0.820985 | 5.134388e-53 | -8.615850e-47 |
Msa1091410 | Msa1215980 | 0.802372 | 5.789033e-49 | -8.615850e-47 |
Msa1091410 | Msa1339170 | 0.811273 | 7.601556e-51 | -8.615850e-47 |
Msa1091410 | Msa1342600 | 0.922330 | 1.130812e-88 | -8.615850e-47 |
Msa0514020 | Msa1091410 | 0.800130 | 1.664640e-48 | -8.615850e-47 |
Msa0561560 | Msa1091410 | 0.806063 | 9.864420e-50 | -8.615850e-47 |
Msa0563740 | Msa1091410 | 0.802554 | 5.309892e-49 | -8.615850e-47 |
Msa0900760 | Msa1091410 | 0.801470 | 8.867752e-49 | -8.615850e-47 |
Msa0909760 | Msa1091410 | 0.805603 | 1.232821e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1091410 | MtrunA17_Chr7g0215341 | 94.224 | 831 | 44 | 1 | 1 | 831 | 1 | 827 | 0.0 | 1592 |
Msa1091410 | MtrunA17_Chr6g0484831 | 90.299 | 835 | 77 | 2 | 1 | 831 | 1 | 835 | 0.0 | 1541 |
Msa1091410 | MtrunA17_Chr5g0406641 | 91.257 | 835 | 68 | 3 | 1 | 830 | 1 | 835 | 0.0 | 1520 |
Msa1091410 | MtrunA17_Chr4g0007641 | 79.621 | 844 | 158 | 6 | 1 | 831 | 1 | 843 | 0.0 | 1359 |
Msa1091410 | MtrunA17_Chr6g0464681 | 68.548 | 868 | 194 | 10 | 1 | 831 | 1 | 826 | 0.0 | 1171 |
Msa1091410 | MtrunA17_Chr6g0486931 | 55.243 | 782 | 317 | 11 | 57 | 815 | 146 | 917 | 0.0 | 872 |
Msa1091410 | MtrunA17_Chr8g0369361 | 51.034 | 774 | 355 | 10 | 57 | 814 | 9 | 774 | 0.0 | 786 |
Msa1091410 | MtrunA17_Chr5g0427891 | 59.184 | 343 | 139 | 1 | 473 | 815 | 1 | 342 | 1.56e-139 | 417 |
Msa1091410 | MtrunA17_Chr2g0302601 | 33.777 | 376 | 205 | 8 | 433 | 798 | 1215 | 1556 | 3.79e-55 | 207 |
Msa1091410 | MtrunA17_Chr4g0017221 | 33.511 | 376 | 206 | 8 | 433 | 798 | 1190 | 1531 | 6.41e-54 | 203 |
Msa1091410 | MtrunA17_Chr6g0477371 | 33.511 | 376 | 206 | 8 | 433 | 798 | 1206 | 1547 | 2.05e-53 | 202 |
Msa1091410 | MtrunA17_Chr8g0364091 | 44.068 | 177 | 86 | 6 | 125 | 289 | 37 | 212 | 3.01e-37 | 140 |
Msa1091410 | MtrunA17_Chr8g0364111 | 77.273 | 66 | 15 | 0 | 749 | 814 | 3 | 68 | 6.64e-29 | 110 |
Msa1091410 | MtrunA17_Chr5g0427881 | 58.462 | 65 | 27 | 0 | 384 | 448 | 39 | 103 | 6.68e-22 | 91.3 |
Msa1091410 | MtrunA17_Chr5g0427871 | 46.154 | 104 | 47 | 2 | 57 | 151 | 38 | 141 | 3.86e-21 | 90.5 |
Msa1091410 | MtrunA17_Chr3g0087051 | 34.545 | 165 | 84 | 4 | 642 | 798 | 2 | 150 | 1.43e-20 | 89.4 |
Msa1091410 | MtrunA17_Chr2g0306841 | 36.364 | 88 | 56 | 0 | 548 | 635 | 15 | 102 | 1.06e-12 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1091410 | AT1G80740.1 | 51.677 | 805 | 338 | 10 | 42 | 818 | 4 | 785 | 0.0 | 817 |
Msa1091410 | AT1G69770.1 | 51.193 | 838 | 368 | 13 | 1 | 811 | 1 | 824 | 0.0 | 811 |
Msa1091410 | AT4G19020.1 | 50.582 | 773 | 353 | 6 | 57 | 814 | 523 | 1281 | 0.0 | 791 |
Msa1091410 | AT4G19020.2 | 50.582 | 773 | 353 | 6 | 57 | 814 | 475 | 1233 | 0.0 | 791 |
Msa1091410 | AT4G14140.3 | 35.040 | 371 | 207 | 7 | 433 | 798 | 1168 | 1509 | 6.00e-56 | 210 |
Msa1091410 | AT4G14140.1 | 35.040 | 371 | 207 | 7 | 433 | 798 | 1168 | 1509 | 6.00e-56 | 210 |
Msa1091410 | AT4G14140.2 | 34.667 | 375 | 203 | 8 | 433 | 798 | 1194 | 1535 | 7.29e-56 | 209 |
Msa1091410 | AT4G08990.1 | 35.294 | 374 | 202 | 9 | 433 | 798 | 1161 | 1502 | 2.68e-54 | 205 |
Msa1091410 | AT4G13610.1 | 34.409 | 372 | 196 | 8 | 433 | 798 | 1070 | 1399 | 1.20e-53 | 203 |
Msa1091410 | AT5G49160.2 | 32.626 | 377 | 208 | 9 | 433 | 798 | 1095 | 1436 | 1.35e-49 | 190 |
Msa1091410 | AT5G49160.1 | 32.626 | 377 | 208 | 9 | 433 | 798 | 1183 | 1524 | 1.78e-49 | 190 |
Find 204 sgRNAs with CRISPR-Local
Find 396 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAATTTGCTGGTGGGTTTC+TGG | 0.008640 | 7_3:+6757175 | Msa1091410:CDS |
TGCTTTGGAGCATCTATTTC+TGG | 0.083264 | 7_3:+6755973 | Msa1091410:CDS |
ACTTTACTGGATTTGTATTC+TGG | 0.102309 | 7_3:+6755925 | Msa1091410:CDS |
CCAAAACGTACGTGAGTTTC+TGG | 0.160369 | 7_3:-6756164 | None:intergenic |
TTCTAGGCCCTGAATATTAT+TGG | 0.195110 | 7_3:-6759914 | None:intergenic |
TGAAGTCTCACTTTCTATTT+TGG | 0.212259 | 7_3:-6755803 | None:intergenic |
TTGAACCCGCTCAGTGTAAA+TGG | 0.231723 | 7_3:-6753776 | None:intergenic |
TCAACACTTTCAAATGAATC+TGG | 0.268377 | 7_3:+6755823 | Msa1091410:CDS |
TAGACAACTTGGGTACTTAA+AGG | 0.288833 | 7_3:-6759776 | None:intergenic |
TGTGAGAAGTTTGTACTAAA+TGG | 0.291004 | 7_3:+6756346 | Msa1091410:CDS |
ACATTAGGTTTGGCAATTCT+AGG | 0.297456 | 7_3:+6759721 | Msa1091410:CDS |
TAGGCCTGAGTGGACTTTAC+TGG | 0.302719 | 7_3:+6755912 | Msa1091410:CDS |
CTGATGATTATGCAAGATTC+TGG | 0.311181 | 7_3:+6759961 | Msa1091410:three_prime_UTR |
GATTCTGGAAACATAAAATA+TGG | 0.313320 | 7_3:+6759976 | Msa1091410:three_prime_UTR |
ACATTCATTCATACAATTCT+AGG | 0.314440 | 7_3:-6759930 | None:intergenic |
CTTGCCCTTGGATACACATT+AGG | 0.317533 | 7_3:+6759706 | Msa1091410:CDS |
TTCGATTTCTTTCTTCTAGA+AGG | 0.320245 | 7_3:-6754080 | None:intergenic |
TTCTTCAACCGGAGATTGTT+TGG | 0.326628 | 7_3:-6754039 | None:intergenic |
AAATTTGCTGGTGGGTTTCT+GGG | 0.327523 | 7_3:+6757176 | Msa1091410:CDS |
CCAGACTGCTATAAGCTTTG+TGG | 0.329709 | 7_3:+6759128 | Msa1091410:CDS |
AACATTTGAGAAAGTTATAT+AGG | 0.344153 | 7_3:-6755665 | None:intergenic |
CATCCGAGCTTGATAATTCA+TGG | 0.344162 | 7_3:-6757225 | None:intergenic |
ATCCTTTAGATTGTTTAGTT+AGG | 0.347736 | 7_3:+6755458 | Msa1091410:CDS |
CATATGGCCTTCCTCAATTT+CGG | 0.349601 | 7_3:+6757267 | Msa1091410:CDS |
CCACCTTGTCAAGGTGTTAG+TGG | 0.350266 | 7_3:+6757023 | Msa1091410:CDS |
ATGTCCACTGGTCTTTGCTT+TGG | 0.352341 | 7_3:+6755958 | Msa1091410:CDS |
AGATATGGAACCTTCTCCTT+TGG | 0.356040 | 7_3:-6758311 | None:intergenic |
CTTTACTGGATTTGTATTCT+GGG | 0.362248 | 7_3:+6755926 | Msa1091410:CDS |
TTAGTGGTTTCAATCGCTTC+AGG | 0.364770 | 7_3:+6757039 | Msa1091410:CDS |
GTCAAATTAAAGAATGTAAT+AGG | 0.367477 | 7_3:+6755893 | Msa1091410:CDS |
GGGCTCCCATGTATCATAAC+TGG | 0.370498 | 7_3:-6756652 | None:intergenic |
TATCCAAGGGCAAGGGCAAC+AGG | 0.371847 | 7_3:-6759697 | None:intergenic |
AGGAACGACTTCGTCTTGTT+TGG | 0.374277 | 7_3:-6753994 | None:intergenic |
GAAACATAAAATATGGCAAA+TGG | 0.375563 | 7_3:+6759983 | Msa1091410:three_prime_UTR |
GTTCCTGTTGCCCTTGCCCT+TGG | 0.380094 | 7_3:+6759694 | Msa1091410:CDS |
ACCTGACTCTGAGGTATTTG+AGG | 0.384130 | 7_3:+6756447 | Msa1091410:CDS |
AACACATACCTCTGTTTGAC+AGG | 0.386966 | 7_3:-6759152 | None:intergenic |
GTAAAATATTGTTCTTCATC+AGG | 0.390612 | 7_3:-6755241 | None:intergenic |
AAAAGAGTGTATCTAAAATC+TGG | 0.397497 | 7_3:+6758478 | Msa1091410:CDS |
ACAAATGTCATAGCATAATC+TGG | 0.400607 | 7_3:-6758595 | None:intergenic |
TCCAGAGATGGTGAATTATT+CGG | 0.404648 | 7_3:+6758199 | Msa1091410:intron |
AGACAACTTGGGTACTTAAA+GGG | 0.412259 | 7_3:-6759775 | None:intergenic |
TTGTTTGGCTTTCTTCCGTT+TGG | 0.415225 | 7_3:-6754024 | None:intergenic |
CCTTGGATACACATTAGGTT+TGG | 0.421810 | 7_3:+6759711 | Msa1091410:CDS |
TGGCCAAGGCATTATACCTT+GGG | 0.423475 | 7_3:+6757649 | Msa1091410:CDS |
ACATTTGAGAAAGTTATATA+GGG | 0.426320 | 7_3:-6755664 | None:intergenic |
GCTGAATACAACAGGCCATT+TGG | 0.427862 | 7_3:+6758713 | Msa1091410:intron |
ATGATGGCTGCAGGGTCATA+TGG | 0.428980 | 7_3:+6757251 | Msa1091410:CDS |
TTCCTAACTAAACAATCTAA+AGG | 0.433146 | 7_3:-6755460 | None:intergenic |
TATCGTGAAGCGAAGGTTGA+TGG | 0.441672 | 7_3:+6754342 | Msa1091410:CDS |
CTTCGTCGGAGAACTTATTC+CGG | 0.444090 | 7_3:+6754133 | Msa1091410:CDS |
ATGAGTTGGTAACGGATATG+AGG | 0.447163 | 7_3:-6757439 | None:intergenic |
TAAAGAAAACAAGGTGGAAT+GGG | 0.451055 | 7_3:+6758444 | Msa1091410:CDS |
GAAACCAGTTCTTCTTCAAC+CGG | 0.452190 | 7_3:-6754050 | None:intergenic |
CTAAGAACTCTGTCTTGGTC+TGG | 0.452322 | 7_3:-6759074 | None:intergenic |
CTGGATTTGTATTCTGGGTG+TGG | 0.458568 | 7_3:+6755931 | Msa1091410:CDS |
CTGATGAAGCACAAAAGAAA+TGG | 0.459268 | 7_3:+6754156 | Msa1091410:CDS |
CTTGCATAATCATCAGTTGT+AGG | 0.460358 | 7_3:-6759954 | None:intergenic |
TTTCTTACTTCAAACTCAGT+AGG | 0.462655 | 7_3:-6757486 | None:intergenic |
ATCTCCGGTTGAAGAAGAAC+TGG | 0.462907 | 7_3:+6754046 | Msa1091410:CDS |
TTCGGCTCTGTAAAACCATT+GGG | 0.464112 | 7_3:-6755266 | None:intergenic |
CTCAGTAGGGATGACTGATC+TGG | 0.468959 | 7_3:-6757472 | None:intergenic |
CAACACTTTCAAATGAATCT+GGG | 0.470283 | 7_3:+6755824 | Msa1091410:CDS |
CGAATAACAACCTGGTTATG+AGG | 0.471305 | 7_3:-6758785 | None:intergenic |
ATGCTATGACATTTGTTCAC+GGG | 0.472626 | 7_3:+6758602 | Msa1091410:CDS |
TTTCTGGGGCGTTATGCTGT+AGG | 0.473896 | 7_3:+6757191 | Msa1091410:CDS |
CGGATGGGAATGATGGCTGC+AGG | 0.474115 | 7_3:+6757242 | Msa1091410:CDS |
AAAGGACGGGCTAGACAACT+TGG | 0.474566 | 7_3:-6759787 | None:intergenic |
ACAGGCCATTTGGTCGACTT+TGG | 0.475021 | 7_3:+6758723 | Msa1091410:intron |
AATATACCTCAAGCCCTCAA+TGG | 0.475252 | 7_3:-6756673 | None:intergenic |
ACCTCAAATACCTCAGAGTC+AGG | 0.475532 | 7_3:-6756448 | None:intergenic |
CCACAAAGCTTATAGCAGTC+TGG | 0.481850 | 7_3:-6759128 | None:intergenic |
ACGATTCCAGTTATGATACA+TGG | 0.482110 | 7_3:+6756646 | Msa1091410:CDS |
TGTGTGTGTGCAGGTGATTA+AGG | 0.483671 | 7_3:+6755378 | Msa1091410:intron |
AAACATAAAATATGGCAAAT+GGG | 0.485354 | 7_3:+6759984 | Msa1091410:three_prime_UTR |
TTTCGGCTCTGTAAAACCAT+TGG | 0.486282 | 7_3:-6755267 | None:intergenic |
GCCATTTGGTCGACTTTGGT+GGG | 0.487889 | 7_3:+6758727 | Msa1091410:CDS |
CGAGAGAATGCAAGGCTACA+AGG | 0.488910 | 7_3:+6759101 | Msa1091410:CDS |
TTTATCAGCTGCATGGACAT+TGG | 0.493693 | 7_3:-6755848 | None:intergenic |
TTCTTACTTCAAACTCAGTA+GGG | 0.495616 | 7_3:-6757485 | None:intergenic |
ATATACCTCAAGCCCTCAAT+GGG | 0.497888 | 7_3:-6756672 | None:intergenic |
TCATCATCAACTACATCTAA+AGG | 0.502737 | 7_3:-6759805 | None:intergenic |
GGCCATTTGGTCGACTTTGG+TGG | 0.503320 | 7_3:+6758726 | Msa1091410:intron |
GATACATGGGAGCCCATTGA+GGG | 0.504051 | 7_3:+6756660 | Msa1091410:CDS |
TGCATATTCATTTATATCCA+CGG | 0.506267 | 7_3:-6756117 | None:intergenic |
CACAAAAGAAATGGCCTCAC+CGG | 0.507084 | 7_3:+6754165 | Msa1091410:CDS |
GAACTCTGTCTTGGTCTGGA+TGG | 0.507573 | 7_3:-6759070 | None:intergenic |
AAAGAAATCGAAGCAATCTT+CGG | 0.508099 | 7_3:+6754091 | Msa1091410:CDS |
GGGTGTGGAGCTATGTCCAC+TGG | 0.509075 | 7_3:+6755946 | Msa1091410:CDS |
TCATCGGTGTTTAATTTCAA+AGG | 0.509674 | 7_3:-6758266 | None:intergenic |
TCAGCAACTAATTGTTTACA+TGG | 0.512928 | 7_3:+6757094 | Msa1091410:CDS |
CACCACAAATAAAATCAGCT+TGG | 0.514779 | 7_3:-6756998 | None:intergenic |
TTAAAGAAAACAAGGTGGAA+TGG | 0.515036 | 7_3:+6758443 | Msa1091410:CDS |
TCCGACGATGCATGCTTCGT+CGG | 0.515548 | 7_3:+6754119 | Msa1091410:CDS |
TTAGATGTAGTTGATGATGA+TGG | 0.517459 | 7_3:+6759808 | Msa1091410:CDS |
GTCCCCAAGGTATAATGCCT+TGG | 0.517822 | 7_3:-6757652 | None:intergenic |
ATCTTTCAGGTGCAATGGAA+GGG | 0.518544 | 7_3:+6756621 | Msa1091410:intron |
AAGAAGATGAATAGTGAAAG+CGG | 0.518886 | 7_3:-6753892 | None:intergenic |
TCAAGCTCGGATGGGAATGA+TGG | 0.519547 | 7_3:+6757235 | Msa1091410:CDS |
CTGGCCAAGGCATTATACCT+TGG | 0.521309 | 7_3:+6757648 | Msa1091410:CDS |
CACTAATGAAAAGTGTCAGC+TGG | 0.523124 | 7_3:+6757629 | Msa1091410:CDS |
AAAACACGCATCCGAAATTG+AGG | 0.524141 | 7_3:-6757278 | None:intergenic |
CAAAACGTACGTGAGTTTCT+GGG | 0.525514 | 7_3:-6756163 | None:intergenic |
TCGTTCCTCATTCTTCCAAA+CGG | 0.526193 | 7_3:+6754009 | Msa1091410:CDS |
TTATAATCTTTCAGGTGCAA+TGG | 0.528275 | 7_3:+6756616 | Msa1091410:intron |
GAAGCCTAAGTATGTTCTCA+TGG | 0.528299 | 7_3:+6757133 | Msa1091410:CDS |
AACAACCTGGTTATGAGGCT+CGG | 0.528328 | 7_3:-6758780 | None:intergenic |
AATCTTTCAGGTGCAATGGA+AGG | 0.528541 | 7_3:+6756620 | Msa1091410:intron |
TCCCACCAAAGTCGACCAAA+TGG | 0.528934 | 7_3:-6758728 | None:intergenic |
CGATTATTTATAAATGAAGC+GGG | 0.529429 | 7_3:-6753857 | None:intergenic |
CATGAATTATCAAGCTCGGA+TGG | 0.529786 | 7_3:+6757226 | Msa1091410:CDS |
GAAGAAAGCCAAACAATCTC+CGG | 0.530553 | 7_3:+6754031 | Msa1091410:CDS |
TTCTTCCGTTTGGAAGAATG+AGG | 0.531258 | 7_3:-6754014 | None:intergenic |
ACAGATTCTGATTTGAATGC+TGG | 0.534166 | 7_3:+6756379 | Msa1091410:CDS |
ATCAACTACATCTAAAGGAC+GGG | 0.535962 | 7_3:-6759800 | None:intergenic |
CCAAACCTAATGTGTATCCA+AGG | 0.536081 | 7_3:-6759711 | None:intergenic |
AATTTCCATTTACACTGAGC+GGG | 0.537479 | 7_3:+6753771 | None:intergenic |
TTCTGGCATTAAGCTTGTCA+CGG | 0.537807 | 7_3:+6755990 | Msa1091410:CDS |
TTGCCACATTCCAAAGGAGA+AGG | 0.538842 | 7_3:+6758301 | Msa1091410:CDS |
AGCGGGTTCAACAAAAGTGC+GGG | 0.539930 | 7_3:+6753788 | Msa1091410:five_prime_UTR |
ATCGTGAAGCGAAGGTTGAT+GGG | 0.542081 | 7_3:+6754343 | Msa1091410:CDS |
GCGATTATTTATAAATGAAG+CGG | 0.548121 | 7_3:-6753858 | None:intergenic |
TATATCAGATTAAAGAGAAG+TGG | 0.554424 | 7_3:+6757862 | Msa1091410:CDS |
GAATGCTAAGAACTCTGTCT+TGG | 0.555016 | 7_3:-6759079 | None:intergenic |
CTGGATTCAACCTCATGAGT+TGG | 0.555366 | 7_3:-6757453 | None:intergenic |
GAACCTTCTCCTTTGGAATG+TGG | 0.555858 | 7_3:-6758304 | None:intergenic |
GTGGTGAGACTTACAGGAAG+AGG | 0.556985 | 7_3:-6756871 | None:intergenic |
ATGTGCAGGTACATGCAAGT+TGG | 0.560046 | 7_3:+6759658 | Msa1091410:intron |
CTCACTCGTTCTTAGTGTAC+CGG | 0.561833 | 7_3:-6754184 | None:intergenic |
AGACTACTCTCTATTTGCTA+TGG | 0.562696 | 7_3:+6756475 | Msa1091410:CDS |
TCTAAAATCTGGAAAGCCGT+TGG | 0.563755 | 7_3:+6758489 | Msa1091410:CDS |
AGCGATGATGAAAAGAGCTA+CGG | 0.565697 | 7_3:+6757811 | Msa1091410:CDS |
AAGGGCCGAGCCTCATAACC+AGG | 0.568054 | 7_3:+6758775 | Msa1091410:CDS |
AGTTGTCAAAGGACCGTCAT+CGG | 0.570986 | 7_3:-6759749 | None:intergenic |
ATGAATTATCAAGCTCGGAT+GGG | 0.571223 | 7_3:+6757227 | Msa1091410:CDS |
TGTGGTGGGCCACCTTGTCA+AGG | 0.574035 | 7_3:+6757014 | Msa1091410:CDS |
TTGTGTCCACTGTTGTAACA+AGG | 0.575348 | 7_3:+6758756 | Msa1091410:CDS |
TGAAAAGTGTCAGCTGGCCA+AGG | 0.575456 | 7_3:+6757635 | Msa1091410:CDS |
AATTTGCTGGTGGGTTTCTG+GGG | 0.576721 | 7_3:+6757177 | Msa1091410:CDS |
TTGAATGCTGGTGAAGAAGC+TGG | 0.577481 | 7_3:+6756391 | Msa1091410:CDS |
TTCTCCATGAGAACATACTT+AGG | 0.578027 | 7_3:-6757137 | None:intergenic |
CGCAATTGATGATCTCCCAC+CGG | 0.580227 | 7_3:+6757674 | Msa1091410:CDS |
GAAGAAGCTGGTGAAGAAGC+TGG | 0.580453 | 7_3:+6756403 | Msa1091410:CDS |
CCTACTCTGAAATATAGTCC+TGG | 0.581965 | 7_3:-6756520 | None:intergenic |
GGACTACATTGCTAAGATTG+TGG | 0.583306 | 7_3:+6755204 | Msa1091410:CDS |
CTAATGTGTATCCAAGGGCA+AGG | 0.584216 | 7_3:-6759705 | None:intergenic |
TGATACATGGGAGCCCATTG+AGG | 0.584875 | 7_3:+6756659 | Msa1091410:CDS |
TGAAAAGACATGGATTAATG+AGG | 0.588868 | 7_3:-6759847 | None:intergenic |
GACAACTTGGGTACTTAAAG+GGG | 0.589664 | 7_3:-6759774 | None:intergenic |
TTAGCATTCGAGAGAATGCA+AGG | 0.591436 | 7_3:+6759093 | Msa1091410:CDS |
GCGATGATGAAAAGAGCTAC+GGG | 0.591951 | 7_3:+6757812 | Msa1091410:CDS |
GCAAACTCTCTCATAGTCAT+CGG | 0.593163 | 7_3:-6758282 | None:intergenic |
TCCGACGAAGCATGCATCGT+CGG | 0.593618 | 7_3:-6754120 | None:intergenic |
TTTAAGTCTACTGAAAGAGT+GGG | 0.594108 | 7_3:+6756315 | Msa1091410:CDS |
TGACTTGAAGAGATGGGCCG+TGG | 0.594840 | 7_3:+6756100 | Msa1091410:intron |
TGGCCATGAATTATCAAGCT+CGG | 0.597417 | 7_3:+6757222 | Msa1091410:CDS |
CGATTCCAGTTATGATACAT+GGG | 0.597731 | 7_3:+6756647 | Msa1091410:CDS |
GGGAGCCCATTGAGGGCTTG+AGG | 0.601086 | 7_3:+6756667 | Msa1091410:CDS |
GATAATTCATGGCCACTAGA+CGG | 0.606811 | 7_3:-6757214 | None:intergenic |
CAATTTCCATTTACACTGAG+CGG | 0.606867 | 7_3:+6753770 | None:intergenic |
ATTCTAGGACTCTCCGATGA+CGG | 0.608856 | 7_3:+6759736 | Msa1091410:CDS |
TGCAGGTGATTAAGGACCAT+GGG | 0.609611 | 7_3:+6755386 | Msa1091410:intron |
TGAGTTGGTAACGGATATGA+GGG | 0.612406 | 7_3:-6757438 | None:intergenic |
TATGCTATGACATTTGTTCA+CGG | 0.613180 | 7_3:+6758601 | Msa1091410:CDS |
GGCAAACTTCAGGGACCTCG+AGG | 0.614201 | 7_3:+6758411 | Msa1091410:CDS |
GATCATCAATTGCGTCCCCA+AGG | 0.614386 | 7_3:-6757665 | None:intergenic |
GTTTCACTATCGTGAAGCGA+AGG | 0.614568 | 7_3:+6754335 | Msa1091410:CDS |
GAGAGTTTGCCACATTCCAA+AGG | 0.615917 | 7_3:+6758295 | Msa1091410:CDS |
AGATAACAGTTGAAAAGACA+TGG | 0.616171 | 7_3:-6759857 | None:intergenic |
CATCAACTACATCTAAAGGA+CGG | 0.616327 | 7_3:-6759801 | None:intergenic |
AATTCAGGTGAGGAATGAGC+CGG | 0.616828 | 7_3:+6756282 | Msa1091410:intron |
ACTTTCTCAAATGTTGACAA+TGG | 0.620113 | 7_3:+6755673 | Msa1091410:CDS |
TCAACCTCATGAGTTGGTAA+CGG | 0.622459 | 7_3:-6757447 | None:intergenic |
TTATGCTGTAGGCCGTCTAG+TGG | 0.625272 | 7_3:+6757202 | Msa1091410:CDS |
TGATCATACAGCATACCACT+TGG | 0.627170 | 7_3:-6758239 | None:intergenic |
CACGCATCCGAAATTGAGGA+AGG | 0.629581 | 7_3:-6757274 | None:intergenic |
GCAAACTTCAGGGACCTCGA+GGG | 0.637506 | 7_3:+6758412 | Msa1091410:CDS |
CAAACCTAATGTGTATCCAA+GGG | 0.638670 | 7_3:-6759710 | None:intergenic |
GGATGGGAATGATGGCTGCA+GGG | 0.639348 | 7_3:+6757243 | Msa1091410:CDS |
TAATGTGTATCCAAGGGCAA+GGG | 0.640727 | 7_3:-6759704 | None:intergenic |
AAGAATGTAATAGGCCTGAG+TGG | 0.644520 | 7_3:+6755902 | Msa1091410:CDS |
TGCTCCAAAGCAAAGACCAG+TGG | 0.647355 | 7_3:-6755962 | None:intergenic |
AAATCCAGTAAAGTCCACTC+AGG | 0.651482 | 7_3:-6755916 | None:intergenic |
AGATGATTCACCTGACTCTG+AGG | 0.655360 | 7_3:+6756438 | Msa1091410:CDS |
TGTGTCCACTGTTGTAACAA+GGG | 0.656136 | 7_3:+6758757 | Msa1091410:CDS |
GAGCGGGTTCAACAAAAGTG+CGG | 0.656242 | 7_3:+6753787 | Msa1091410:five_prime_UTR |
ACACATACCTCTGTTTGACA+GGG | 0.662004 | 7_3:-6759151 | None:intergenic |
AAGGACGGGCTAGACAACTT+GGG | 0.665885 | 7_3:-6759786 | None:intergenic |
ATATCCGTTACCAACTCATG+AGG | 0.669953 | 7_3:+6757443 | Msa1091410:CDS |
ATGTCAAAATAGAATTCACA+AGG | 0.670234 | 7_3:-6755628 | None:intergenic |
CTCGGCCCTTGTTACAACAG+TGG | 0.671085 | 7_3:-6758762 | None:intergenic |
GTGCAGGTGATTAAGGACCA+TGG | 0.674534 | 7_3:+6755385 | Msa1091410:intron |
GGCCAAGGCATTATACCTTG+GGG | 0.678055 | 7_3:+6757650 | Msa1091410:CDS |
CATATATACATACTTAGAGG+AGG | 0.681619 | 7_3:-6758626 | None:intergenic |
CCACTAACACCTTGACAAGG+TGG | 0.683957 | 7_3:-6757023 | None:intergenic |
GACTCTCAAAGTGCACCAAG+TGG | 0.685496 | 7_3:+6758224 | Msa1091410:CDS |
TTTGTGGCCCTGTCAAACAG+AGG | 0.688111 | 7_3:+6759144 | Msa1091410:CDS |
TTAAAGGGGAGAGTTGTCAA+AGG | 0.689309 | 7_3:-6759760 | None:intergenic |
TCAAAATAGAATTCACAAGG+AGG | 0.689598 | 7_3:-6755625 | None:intergenic |
TGTGCTAGTTAAAGAAAACA+AGG | 0.696627 | 7_3:+6758435 | Msa1091410:CDS |
CTTTAACTAGCACACCCTCG+AGG | 0.704914 | 7_3:-6758426 | None:intergenic |
GCTAGTTAAAGAAAACAAGG+TGG | 0.715923 | 7_3:+6758438 | Msa1091410:CDS |
TCGTTCTTAGTGTACCGGTG+AGG | 0.720228 | 7_3:-6754179 | None:intergenic |
AAACCACTAACACCTTGACA+AGG | 0.729461 | 7_3:-6757026 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGAAATCATATATAAAATAA+CGG | - | chr7_3:6754982-6755001 | None:intergenic | 10.0% |
!!! | TTTATTTCATGTTGAAATTT+TGG | + | chr7_3:6754456-6754475 | Msa1091410:intron | 15.0% |
!!! | TGTTGAAAATTTTGTTTTTT+AGG | + | chr7_3:6754547-6754566 | Msa1091410:intron | 15.0% |
!!! | GTTGAAAATTTTGTTTTTTA+GGG | + | chr7_3:6754548-6754567 | Msa1091410:intron | 15.0% |
!!! | TGTTGTAAATTTTGTTTTTT+AGG | + | chr7_3:6754585-6754604 | Msa1091410:intron | 15.0% |
!!! | GTTGTAAATTTTGTTTTTTA+GGG | + | chr7_3:6754586-6754605 | Msa1091410:intron | 15.0% |
!!! | TTTTTTTTTTATGTTGATTG+TGG | + | chr7_3:6755758-6755777 | Msa1091410:intron | 15.0% |
!!! | TAATTTGCATAATGTTTTTT+TGG | + | chr7_3:6756022-6756041 | Msa1091410:intron | 15.0% |
!! | CTATAAATTTATAATCTTTC+AGG | + | chr7_3:6756608-6756627 | Msa1091410:intron | 15.0% |
!!! | ATGAAAGATTTTGTTATAAA+TGG | + | chr7_3:6756829-6756848 | Msa1091410:CDS | 15.0% |
!!! | TTTTGTTATAAATGGATATA+AGG | + | chr7_3:6756837-6756856 | Msa1091410:CDS | 15.0% |
!!! | TTACTCTAAATGTTTTAAAA+TGG | + | chr7_3:6757375-6757394 | Msa1091410:intron | 15.0% |
!! | CATATATTTCAATTTCAAAA+TGG | - | chr7_3:6759355-6759374 | None:intergenic | 15.0% |
!! | ATATAGAAGTTAGTTATAAT+AGG | - | chr7_3:6759411-6759430 | None:intergenic | 15.0% |
!!! | AAAAAAAAGTATGAAATCCA+AGG | + | chr7_3:6754892-6754911 | Msa1091410:intron | 20.0% |
!!! | TTTATGGTTATTGTTGATTT+TGG | + | chr7_3:6755346-6755365 | Msa1091410:intron | 20.0% |
!!! | ATGTTGATTTTATATACTAC+AGG | + | chr7_3:6755582-6755601 | Msa1091410:intron | 20.0% |
!! | ACATTTGAGAAAGTTATATA+GGG | - | chr7_3:6755667-6755686 | None:intergenic | 20.0% |
!! | AACATTTGAGAAAGTTATAT+AGG | - | chr7_3:6755668-6755687 | None:intergenic | 20.0% |
!! | GTCAAATTAAAGAATGTAAT+AGG | + | chr7_3:6755893-6755912 | Msa1091410:CDS | 20.0% |
!! | TTGCATAAGATAAAGTTATA+AGG | - | chr7_3:6756554-6756573 | None:intergenic | 20.0% |
!!! | ATAATCAATATCTTGATGAT+TGG | - | chr7_3:6756699-6756718 | None:intergenic | 20.0% |
!!! | TTAAGATTTGCTGTTAATTA+AGG | + | chr7_3:6756741-6756760 | Msa1091410:intron | 20.0% |
!!! | TCTAAATGTTTTAAAATGGA+AGG | + | chr7_3:6757379-6757398 | Msa1091410:intron | 20.0% |
!!! | TTTGAGTTTTGAATTATTCT+TGG | + | chr7_3:6757900-6757919 | Msa1091410:intron | 20.0% |
!! | TATAATTAGAATTGTGTATG+TGG | + | chr7_3:6758084-6758103 | Msa1091410:intron | 20.0% |
!! | CATAATATCAATTCAAGATA+TGG | - | chr7_3:6758329-6758348 | None:intergenic | 20.0% |
!!! | TTTTAAAGAGGTTTTACAAT+GGG | - | chr7_3:6758860-6758879 | None:intergenic | 20.0% |
!!! | AATACAACATTGTTTTAAAG+AGG | - | chr7_3:6758872-6758891 | None:intergenic | 20.0% |
!! | ATTTCAATTTCAAAATGGAA+GGG | - | chr7_3:6759350-6759369 | None:intergenic | 20.0% |
!! | TATTTCAATTTCAAAATGGA+AGG | - | chr7_3:6759351-6759370 | None:intergenic | 20.0% |
!!! | ATAATAGGTTTATCAGTTTT+TGG | - | chr7_3:6759396-6759415 | None:intergenic | 20.0% |
!! | AATATTACACCTAAAAATTC+TGG | - | chr7_3:6759485-6759504 | None:intergenic | 20.0% |
!! | TTAGGTGTAATATTTCTTAT+TGG | + | chr7_3:6759491-6759510 | Msa1091410:intron | 20.0% |
!! | TTCCATTATTATGTATATCA+TGG | + | chr7_3:6759614-6759633 | Msa1091410:intron | 20.0% |
!!! | TTTTTAAGCCAATAATATTC+AGG | + | chr7_3:6759906-6759925 | Msa1091410:three_prime_UTR | 20.0% |
!!! | TTTTAAGCCAATAATATTCA+GGG | + | chr7_3:6759907-6759926 | Msa1091410:three_prime_UTR | 20.0% |
!! | AAACATAAAATATGGCAAAT+GGG | + | chr7_3:6759984-6760003 | Msa1091410:three_prime_UTR | 20.0% |
! | CGATTATTTATAAATGAAGC+GGG | - | chr7_3:6753860-6753879 | None:intergenic | 25.0% |
! | GCGATTATTTATAAATGAAG+CGG | - | chr7_3:6753861-6753880 | None:intergenic | 25.0% |
!!! | TGTTGAAATTTTGGTGTTTT+AGG | + | chr7_3:6754465-6754484 | Msa1091410:intron | 25.0% |
!!! | GTTGAAATTTTGGTGTTTTA+GGG | + | chr7_3:6754466-6754485 | Msa1091410:intron | 25.0% |
!! | TTGCTGAAAATTGTGTTTTA+TGG | + | chr7_3:6754655-6754674 | Msa1091410:intron | 25.0% |
!! | TTCATTTCTTTGATTTCTTG+TGG | + | chr7_3:6754678-6754697 | Msa1091410:intron | 25.0% |
! | TTGATTTCTTGTGGAAAATT+TGG | + | chr7_3:6754687-6754706 | Msa1091410:intron | 25.0% |
!! | CATGTTGAAAAATGTGTTTT+AGG | + | chr7_3:6755000-6755019 | Msa1091410:intron | 25.0% |
! | GTAAAATATTGTTCTTCATC+AGG | - | chr7_3:6755244-6755263 | None:intergenic | 25.0% |
! | ATCCTTTAGATTGTTTAGTT+AGG | + | chr7_3:6755458-6755477 | Msa1091410:CDS | 25.0% |
! | TTCCTAACTAAACAATCTAA+AGG | - | chr7_3:6755463-6755482 | None:intergenic | 25.0% |
! | ATGTCAAAATAGAATTCACA+AGG | - | chr7_3:6755631-6755650 | None:intergenic | 25.0% |
! | TGCATATTCATTTATATCCA+CGG | - | chr7_3:6756120-6756139 | None:intergenic | 25.0% |
! | AAAAATCTAGTACTAAGCAA+CGG | - | chr7_3:6757335-6757354 | None:intergenic | 25.0% |
! | GAAATTTACAATCACAACAT+GGG | - | chr7_3:6757555-6757574 | None:intergenic | 25.0% |
! | AGAAATTTACAATCACAACA+TGG | - | chr7_3:6757556-6757575 | None:intergenic | 25.0% |
! | TATATCAGATTAAAGAGAAG+TGG | + | chr7_3:6757862-6757881 | Msa1091410:CDS | 25.0% |
!!! | TTCTTGGTTGTTTTCTTTTT+TGG | + | chr7_3:6757916-6757935 | Msa1091410:intron | 25.0% |
! | AAGCACAATTAGAATTTACA+TGG | - | chr7_3:6758375-6758394 | None:intergenic | 25.0% |
!! | AAAAGAGTGTATCTAAAATC+TGG | + | chr7_3:6758478-6758497 | Msa1091410:CDS | 25.0% |
! | TATATGGAAAAAAAAGGTTG+TGG | - | chr7_3:6758571-6758590 | None:intergenic | 25.0% |
!!! | ACAACCTTTTTTTTCCATAT+AGG | + | chr7_3:6758570-6758589 | Msa1091410:intron | 25.0% |
!!! | GTTTTAAAGAGGTTTTACAA+TGG | - | chr7_3:6758861-6758880 | None:intergenic | 25.0% |
! | TTCTTATTGGACTAACAATA+TGG | + | chr7_3:6759504-6759523 | Msa1091410:intron | 25.0% |
! | TGCCATGATATACATAATAA+TGG | - | chr7_3:6759619-6759638 | None:intergenic | 25.0% |
! | ACATTCATTCATACAATTCT+AGG | - | chr7_3:6759933-6759952 | None:intergenic | 25.0% |
!! | GATTCTGGAAACATAAAATA+TGG | + | chr7_3:6759976-6759995 | Msa1091410:three_prime_UTR | 25.0% |
! | GAAACATAAAATATGGCAAA+TGG | + | chr7_3:6759983-6760002 | Msa1091410:three_prime_UTR | 25.0% |
AAGAAGATGAATAGTGAAAG+CGG | - | chr7_3:6753895-6753914 | None:intergenic | 30.0% | |
TTCGATTTCTTTCTTCTAGA+AGG | - | chr7_3:6754083-6754102 | None:intergenic | 30.0% | |
AAAGAAATCGAAGCAATCTT+CGG | + | chr7_3:6754091-6754110 | Msa1091410:CDS | 30.0% | |
! | TAGGGTTTATTTCTTCATGT+TGG | + | chr7_3:6754604-6754623 | Msa1091410:intron | 30.0% |
!!! | TGTATAGTGTTTTGATGAAG+CGG | + | chr7_3:6754865-6754884 | Msa1091410:intron | 30.0% |
! | TAGTAATTTGCCACATCATT+CGG | + | chr7_3:6754917-6754936 | Msa1091410:intron | 30.0% |
! | TGATGTGATGAATGTTGTTT+AGG | + | chr7_3:6755165-6755184 | Msa1091410:intron | 30.0% |
! | GATGTGATGAATGTTGTTTA+GGG | + | chr7_3:6755166-6755185 | Msa1091410:intron | 30.0% |
! | ATGTGATGAATGTTGTTTAG+GGG | + | chr7_3:6755167-6755186 | Msa1091410:intron | 30.0% |
! | AACAATATTTTACTGCCCAA+TGG | + | chr7_3:6755251-6755270 | Msa1091410:CDS | 30.0% |
! | TTCAATCTTTACCGTGTTTT+CGG | - | chr7_3:6755287-6755306 | None:intergenic | 30.0% |
!!! | AACTCTTTCGTGTTTTGTTT+TGG | + | chr7_3:6755311-6755330 | Msa1091410:intron | 30.0% |
TCAAAATAGAATTCACAAGG+AGG | - | chr7_3:6755628-6755647 | None:intergenic | 30.0% | |
ACTTTCTCAAATGTTGACAA+TGG | + | chr7_3:6755673-6755692 | Msa1091410:CDS | 30.0% | |
! | TGAAGTCTCACTTTCTATTT+TGG | - | chr7_3:6755806-6755825 | None:intergenic | 30.0% |
TCAACACTTTCAAATGAATC+TGG | + | chr7_3:6755823-6755842 | Msa1091410:CDS | 30.0% | |
CAACACTTTCAAATGAATCT+GGG | + | chr7_3:6755824-6755843 | Msa1091410:CDS | 30.0% | |
ACTTTACTGGATTTGTATTC+TGG | + | chr7_3:6755925-6755944 | Msa1091410:CDS | 30.0% | |
CTTTACTGGATTTGTATTCT+GGG | + | chr7_3:6755926-6755945 | Msa1091410:CDS | 30.0% | |
!!! | TTGTTTTTGACTTGAAGAGA+TGG | + | chr7_3:6756093-6756112 | Msa1091410:intron | 30.0% |
!!! | TGTTTTTGACTTGAAGAGAT+GGG | + | chr7_3:6756094-6756113 | Msa1091410:intron | 30.0% |
CTTTCCAAAATGTCAAATTC+AGG | + | chr7_3:6756267-6756286 | Msa1091410:intron | 30.0% | |
!! | TTTTAAGTCTACTGAAAGAG+TGG | + | chr7_3:6756314-6756333 | Msa1091410:CDS | 30.0% |
TTTAAGTCTACTGAAAGAGT+GGG | + | chr7_3:6756315-6756334 | Msa1091410:CDS | 30.0% | |
TGTGAGAAGTTTGTACTAAA+TGG | + | chr7_3:6756346-6756365 | Msa1091410:CDS | 30.0% | |
! | TTATAATCTTTCAGGTGCAA+TGG | + | chr7_3:6756616-6756635 | Msa1091410:intron | 30.0% |
TTGAGTACAAGTCAATAATG+AGG | - | chr7_3:6756898-6756917 | None:intergenic | 30.0% | |
!! | AAGCTGATTTTATTTGTGGT+GGG | + | chr7_3:6757000-6757019 | Msa1091410:CDS | 30.0% |
!!! | TGATTTTTTTCATCCTCCAA+TGG | - | chr7_3:6757077-6757096 | None:intergenic | 30.0% |
TCAGCAACTAATTGTTTACA+TGG | + | chr7_3:6757094-6757113 | Msa1091410:CDS | 30.0% | |
!!! | GTTGACATTTTGAAATTTGC+TGG | + | chr7_3:6757164-6757183 | Msa1091410:CDS | 30.0% |
!!! | ACATTTTGAAATTTGCTGGT+GGG | + | chr7_3:6757168-6757187 | Msa1091410:CDS | 30.0% |
TTCTTACTTCAAACTCAGTA+GGG | - | chr7_3:6757488-6757507 | None:intergenic | 30.0% | |
TTTCTTACTTCAAACTCAGT+AGG | - | chr7_3:6757489-6757508 | None:intergenic | 30.0% | |
TCTTTGTACTTTCATAATGC+AGG | + | chr7_3:6757587-6757606 | Msa1091410:intron | 30.0% | |
TTTGATTCCATTTCTTTCCT+TGG | + | chr7_3:6757755-6757774 | Msa1091410:intron | 30.0% | |
!!! | TAGTTTTGAAAATCAGTACG+AGG | - | chr7_3:6757844-6757863 | None:intergenic | 30.0% |
CAAAATGCAGTTCATATATG+CGG | - | chr7_3:6758046-6758065 | None:intergenic | 30.0% | |
! | TCATCGGTGTTTAATTTCAA+AGG | - | chr7_3:6758269-6758288 | None:intergenic | 30.0% |
TGTGCTAGTTAAAGAAAACA+AGG | + | chr7_3:6758435-6758454 | Msa1091410:CDS | 30.0% | |
TTAAAGAAAACAAGGTGGAA+TGG | + | chr7_3:6758443-6758462 | Msa1091410:CDS | 30.0% | |
TAAAGAAAACAAGGTGGAAT+GGG | + | chr7_3:6758444-6758463 | Msa1091410:CDS | 30.0% | |
! | AGATACACTCTTTTAACAGA+CGG | - | chr7_3:6758472-6758491 | None:intergenic | 30.0% |
TACTAATTCTGTCTTGTCTT+AGG | + | chr7_3:6758512-6758531 | Msa1091410:intron | 30.0% | |
ACTAATTCTGTCTTGTCTTA+GGG | + | chr7_3:6758513-6758532 | Msa1091410:intron | 30.0% | |
GGAACCTATATGGAAAAAAA+AGG | - | chr7_3:6758577-6758596 | None:intergenic | 30.0% | |
ACAAATGTCATAGCATAATC+TGG | - | chr7_3:6758598-6758617 | None:intergenic | 30.0% | |
TATGCTATGACATTTGTTCA+CGG | + | chr7_3:6758601-6758620 | Msa1091410:CDS | 30.0% | |
CATATATACATACTTAGAGG+AGG | - | chr7_3:6758629-6758648 | None:intergenic | 30.0% | |
GCACATATATACATACTTAG+AGG | - | chr7_3:6758632-6758651 | None:intergenic | 30.0% | |
!!! | ATCTGACCATGTTTTTTGTT+TGG | + | chr7_3:6758947-6758966 | Msa1091410:intron | 30.0% |
TCCAAAGTTATTCCATATCT+AGG | + | chr7_3:6759040-6759059 | Msa1091410:intron | 30.0% | |
TATGAAAATTTGTGTATGCG+AGG | - | chr7_3:6759251-6759270 | None:intergenic | 30.0% | |
TCATATGAAGTTTACAGACA+AGG | + | chr7_3:6759304-6759323 | Msa1091410:intron | 30.0% | |
!!! | TTTTTGGTTAAGGAATTGGA+AGG | - | chr7_3:6759380-6759399 | None:intergenic | 30.0% |
!!! | TCAGTTTTTGGTTAAGGAAT+TGG | - | chr7_3:6759384-6759403 | None:intergenic | 30.0% |
!!! | GGTTTATCAGTTTTTGGTTA+AGG | - | chr7_3:6759390-6759409 | None:intergenic | 30.0% |
TATTTCCATCTTTAATGTGC+AGG | + | chr7_3:6759644-6759663 | Msa1091410:intron | 30.0% | |
TCATCATCAACTACATCTAA+AGG | - | chr7_3:6759808-6759827 | None:intergenic | 30.0% | |
!! | TTAGATGTAGTTGATGATGA+TGG | + | chr7_3:6759808-6759827 | Msa1091410:CDS | 30.0% |
! | TGAAAAGACATGGATTAATG+AGG | - | chr7_3:6759850-6759869 | None:intergenic | 30.0% |
AGATAACAGTTGAAAAGACA+TGG | - | chr7_3:6759860-6759879 | None:intergenic | 30.0% | |
CTGATGAAGCACAAAAGAAA+TGG | + | chr7_3:6754156-6754175 | Msa1091410:CDS | 35.0% | |
! | TGATGGGATTTTATATCAGC+TGG | + | chr7_3:6754359-6754378 | Msa1091410:CDS | 35.0% |
! | GTTTTGTGGTACAATCATTC+GGG | - | chr7_3:6754780-6754799 | None:intergenic | 35.0% |
! | CGTTTTGTGGTACAATCATT+CGG | - | chr7_3:6754781-6754800 | None:intergenic | 35.0% |
! | CAGTAAAAATTTTGCCTAGC+CGG | + | chr7_3:6754821-6754840 | Msa1091410:intron | 35.0% |
TGTGGCAAATTACTATTCCT+TGG | - | chr7_3:6754912-6754931 | None:intergenic | 35.0% | |
! | AGTAATTTGCCACATCATTC+GGG | + | chr7_3:6754918-6754937 | Msa1091410:intron | 35.0% |
! | TGTGATGAATGTTGTTTAGG+GGG | + | chr7_3:6755168-6755187 | Msa1091410:intron | 35.0% |
!! | TTGGTTTGCTTTGCTGTTTA+TGG | + | chr7_3:6755330-6755349 | Msa1091410:intron | 35.0% |
! | TTTTGTCAACTAGATTCCCA+TGG | - | chr7_3:6755405-6755424 | None:intergenic | 35.0% |
GGAATCTAGTTGACAAAAAG+AGG | + | chr7_3:6755407-6755426 | Msa1091410:CDS | 35.0% | |
GCTGATAAAAATGCGGTTAA+AGG | + | chr7_3:6755862-6755881 | Msa1091410:CDS | 35.0% | |
! | CTCACCTGAATTTGACATTT+TGG | - | chr7_3:6756274-6756293 | None:intergenic | 35.0% |
CAAAATGTCAAATTCAGGTG+AGG | + | chr7_3:6756272-6756291 | Msa1091410:intron | 35.0% | |
AGACTTAAAAAGTCTTCTGC+CGG | - | chr7_3:6756304-6756323 | None:intergenic | 35.0% | |
! | ACAGATTCTGATTTGAATGC+TGG | + | chr7_3:6756379-6756398 | Msa1091410:CDS | 35.0% |
! | AGACTACTCTCTATTTGCTA+TGG | + | chr7_3:6756475-6756494 | Msa1091410:CDS | 35.0% |
ACGATTCCAGTTATGATACA+TGG | + | chr7_3:6756646-6756665 | Msa1091410:CDS | 35.0% | |
CGATTCCAGTTATGATACAT+GGG | + | chr7_3:6756647-6756666 | Msa1091410:CDS | 35.0% | |
TACAAGTCAATAATGAGGAG+TGG | - | chr7_3:6756893-6756912 | None:intergenic | 35.0% | |
AACCATTAGAGGTGAAAGAA+GGG | - | chr7_3:6756922-6756941 | None:intergenic | 35.0% | |
AAACCATTAGAGGTGAAAGA+AGG | - | chr7_3:6756923-6756942 | None:intergenic | 35.0% | |
!! | GACAGTTGATAAACCATTAG+AGG | - | chr7_3:6756933-6756952 | None:intergenic | 35.0% |
TACTACTTCATGCTTGTCTA+GGG | + | chr7_3:6756975-6756994 | Msa1091410:intron | 35.0% | |
CACCACAAATAAAATCAGCT+TGG | - | chr7_3:6757001-6757020 | None:intergenic | 35.0% | |
!! | CAAGCTGATTTTATTTGTGG+TGG | + | chr7_3:6756999-6757018 | Msa1091410:CDS | 35.0% |
TTCTCCATGAGAACATACTT+AGG | - | chr7_3:6757140-6757159 | None:intergenic | 35.0% | |
!!! | GACATTTTGAAATTTGCTGG+TGG | + | chr7_3:6757167-6757186 | Msa1091410:CDS | 35.0% |
ATGAATTATCAAGCTCGGAT+GGG | + | chr7_3:6757227-6757246 | Msa1091410:CDS | 35.0% | |
! | TTGTGCCCTTTTCTTAGATA+AGG | + | chr7_3:6757527-6757546 | Msa1091410:intron | 35.0% |
GGGTTCCTTATCTAAGAAAA+GGG | - | chr7_3:6757535-6757554 | None:intergenic | 35.0% | |
TGGGTTCCTTATCTAAGAAA+AGG | - | chr7_3:6757536-6757555 | None:intergenic | 35.0% | |
TGTGAGCAAAAACAACATAC+CGG | - | chr7_3:6757696-6757715 | None:intergenic | 35.0% | |
ATTGCAATGAAAGATGTCAG+TGG | + | chr7_3:6757948-6757967 | Msa1091410:intron | 35.0% | |
! | AACTGCATTTTGTCTTACTC+TGG | + | chr7_3:6758054-6758073 | Msa1091410:intron | 35.0% |
GCATATTGTTACATGTCACA+TGG | + | chr7_3:6758112-6758131 | Msa1091410:intron | 35.0% | |
! | CCAATTCAAGTTAGTGATGA+AGG | - | chr7_3:6758158-6758177 | None:intergenic | 35.0% |
CCTTCATCACTAACTTGAAT+TGG | + | chr7_3:6758155-6758174 | Msa1091410:intron | 35.0% | |
! | ATATGTTTCTACTCCAGAGA+TGG | + | chr7_3:6758187-6758206 | Msa1091410:intron | 35.0% |
TCCAGAGATGGTGAATTATT+CGG | + | chr7_3:6758199-6758218 | Msa1091410:intron | 35.0% | |
GCTAGTTAAAGAAAACAAGG+TGG | + | chr7_3:6758438-6758457 | Msa1091410:CDS | 35.0% | |
! | GATACACTCTTTTAACAGAC+GGG | - | chr7_3:6758471-6758490 | None:intergenic | 35.0% |
CAAGACAGAATTAGTACCAA+CGG | - | chr7_3:6758508-6758527 | None:intergenic | 35.0% | |
! | AGCATAATCTGGAACCTATA+TGG | - | chr7_3:6758587-6758606 | None:intergenic | 35.0% |
ATGCTATGACATTTGTTCAC+GGG | + | chr7_3:6758602-6758621 | Msa1091410:CDS | 35.0% | |
! | AAAGAGGTTTTACAATGGGA+GGG | - | chr7_3:6758856-6758875 | None:intergenic | 35.0% |
! | TAAAGAGGTTTTACAATGGG+AGG | - | chr7_3:6758857-6758876 | None:intergenic | 35.0% |
TGAGAAATGTTATCGACCTT+AGG | + | chr7_3:6758892-6758911 | Msa1091410:intron | 35.0% | |
ATGCTAACATGATCATCCTA+AGG | - | chr7_3:6758911-6758930 | None:intergenic | 35.0% | |
ACAGGTCCAAACAAAAAACA+TGG | - | chr7_3:6758956-6758975 | None:intergenic | 35.0% | |
GCCTAGATATGGAATAACTT+TGG | - | chr7_3:6759044-6759063 | None:intergenic | 35.0% | |
GTTCAAACTGGTATCTTATC+TGG | + | chr7_3:6759172-6759191 | Msa1091410:intron | 35.0% | |
ATGAAGTTTACAGACAAGGA+TGG | + | chr7_3:6759308-6759327 | Msa1091410:intron | 35.0% | |
ATGTACCTGCACATTAAAGA+TGG | - | chr7_3:6759652-6759671 | None:intergenic | 35.0% | |
CAAACCTAATGTGTATCCAA+GGG | - | chr7_3:6759713-6759732 | None:intergenic | 35.0% | |
ACATTAGGTTTGGCAATTCT+AGG | + | chr7_3:6759721-6759740 | Msa1091410:CDS | 35.0% | |
AGACAACTTGGGTACTTAAA+GGG | - | chr7_3:6759778-6759797 | None:intergenic | 35.0% | |
TAGACAACTTGGGTACTTAA+AGG | - | chr7_3:6759779-6759798 | None:intergenic | 35.0% | |
ATCAACTACATCTAAAGGAC+GGG | - | chr7_3:6759803-6759822 | None:intergenic | 35.0% | |
CATCAACTACATCTAAAGGA+CGG | - | chr7_3:6759804-6759823 | None:intergenic | 35.0% | |
TTCTAGGCCCTGAATATTAT+TGG | - | chr7_3:6759917-6759936 | None:intergenic | 35.0% | |
CTTGCATAATCATCAGTTGT+AGG | - | chr7_3:6759957-6759976 | None:intergenic | 35.0% | |
CTGATGATTATGCAAGATTC+TGG | + | chr7_3:6759961-6759980 | Msa1091410:three_prime_UTR | 35.0% | |
!!! | GCGTTTTTGAGGCATTGTTA+AGG | - | chr7_3:6753961-6753980 | None:intergenic | 40.0% |
! | GATTTACGAACGCGTTTTTG+AGG | - | chr7_3:6753972-6753991 | None:intergenic | 40.0% |
TCGTTCCTCATTCTTCCAAA+CGG | + | chr7_3:6754009-6754028 | Msa1091410:CDS | 40.0% | |
TTCTTCCGTTTGGAAGAATG+AGG | - | chr7_3:6754017-6754036 | None:intergenic | 40.0% | |
!! | TTGTTTGGCTTTCTTCCGTT+TGG | - | chr7_3:6754027-6754046 | None:intergenic | 40.0% |
GAAGAAAGCCAAACAATCTC+CGG | + | chr7_3:6754031-6754050 | Msa1091410:CDS | 40.0% | |
TTCTTCAACCGGAGATTGTT+TGG | - | chr7_3:6754042-6754061 | None:intergenic | 40.0% | |
GAAACCAGTTCTTCTTCAAC+CGG | - | chr7_3:6754053-6754072 | None:intergenic | 40.0% | |
! | TTCTTTTGTGCTTCATCAGC+CGG | - | chr7_3:6754155-6754174 | None:intergenic | 40.0% |
! | GTTTTGTAGTGAATCGAGTG+AGG | + | chr7_3:6754293-6754312 | Msa1091410:intron | 40.0% |
! | TGGGATTTTATATCAGCTGG+AGG | + | chr7_3:6754362-6754381 | Msa1091410:CDS | 40.0% |
! | GGAGGATAATGCTTTTGTCA+AGG | + | chr7_3:6754380-6754399 | Msa1091410:CDS | 40.0% |
! | TTCATTTCGCGAACGTTTTG+TGG | - | chr7_3:6754794-6754813 | None:intergenic | 40.0% |
! | CGGCTAGGCAAAATTTTTAC+TGG | - | chr7_3:6754823-6754842 | None:intergenic | 40.0% |
AGAGAATGTGTATTCGCGAT+TGG | - | chr7_3:6754946-6754965 | None:intergenic | 40.0% | |
GGACTACATTGCTAAGATTG+TGG | + | chr7_3:6755204-6755223 | Msa1091410:CDS | 40.0% | |
TTCGGCTCTGTAAAACCATT+GGG | - | chr7_3:6755269-6755288 | None:intergenic | 40.0% | |
TTTCGGCTCTGTAAAACCAT+TGG | - | chr7_3:6755270-6755289 | None:intergenic | 40.0% | |
! | GTTTTACAGAGCCGAAAACA+CGG | + | chr7_3:6755273-6755292 | Msa1091410:CDS | 40.0% |
TGATTTGAATGTGTGTGTGC+AGG | + | chr7_3:6755369-6755388 | Msa1091410:intron | 40.0% | |
! | CTACATGAAGCACTTACATC+AGG | - | chr7_3:6755508-6755527 | None:intergenic | 40.0% |
TTTGGCAGCTGTATCAATCA+GGG | - | chr7_3:6755788-6755807 | None:intergenic | 40.0% | |
! | TTTTGGCAGCTGTATCAATC+AGG | - | chr7_3:6755789-6755808 | None:intergenic | 40.0% |
TTTATCAGCTGCATGGACAT+TGG | - | chr7_3:6755851-6755870 | None:intergenic | 40.0% | |
CCATGCAGCTGATAAAAATG+CGG | + | chr7_3:6755855-6755874 | Msa1091410:CDS | 40.0% | |
AAGAATGTAATAGGCCTGAG+TGG | + | chr7_3:6755902-6755921 | Msa1091410:CDS | 40.0% | |
AAATCCAGTAAAGTCCACTC+AGG | - | chr7_3:6755919-6755938 | None:intergenic | 40.0% | |
!! | TGCTTTGGAGCATCTATTTC+TGG | + | chr7_3:6755973-6755992 | Msa1091410:CDS | 40.0% |
TTCTGGCATTAAGCTTGTCA+CGG | + | chr7_3:6755990-6756009 | Msa1091410:CDS | 40.0% | |
CAAAACGTACGTGAGTTTCT+GGG | - | chr7_3:6756166-6756185 | None:intergenic | 40.0% | |
!! | CCTGGTTTTTCATCTTCGTT+GGG | - | chr7_3:6756505-6756524 | None:intergenic | 40.0% |
!! | TCCTGGTTTTTCATCTTCGT+TGG | - | chr7_3:6756506-6756525 | None:intergenic | 40.0% |
!! | CCTACTCTGAAATATAGTCC+TGG | - | chr7_3:6756523-6756542 | None:intergenic | 40.0% |
CCAGGACTATATTTCAGAGT+AGG | + | chr7_3:6756520-6756539 | Msa1091410:intron | 40.0% | |
! | AATCTTTCAGGTGCAATGGA+AGG | + | chr7_3:6756620-6756639 | Msa1091410:intron | 40.0% |
! | ATCTTTCAGGTGCAATGGAA+GGG | + | chr7_3:6756621-6756640 | Msa1091410:intron | 40.0% |
ATATACCTCAAGCCCTCAAT+GGG | - | chr7_3:6756675-6756694 | None:intergenic | 40.0% | |
AATATACCTCAAGCCCTCAA+TGG | - | chr7_3:6756676-6756695 | None:intergenic | 40.0% | |
ACCATTAGAGGTGAAAGAAG+GGG | - | chr7_3:6756921-6756940 | None:intergenic | 40.0% | |
GTACTACTTCATGCTTGTCT+AGG | + | chr7_3:6756974-6756993 | Msa1091410:intron | 40.0% | |
!! | GGCCAAGCTGATTTTATTTG+TGG | + | chr7_3:6756996-6757015 | Msa1091410:CDS | 40.0% |
AAACCACTAACACCTTGACA+AGG | - | chr7_3:6757029-6757048 | None:intergenic | 40.0% | |
TTAGTGGTTTCAATCGCTTC+AGG | + | chr7_3:6757039-6757058 | Msa1091410:CDS | 40.0% | |
CAGGAACAAAAATGCTCCAT+TGG | + | chr7_3:6757058-6757077 | Msa1091410:CDS | 40.0% | |
GAACAAAAATGCTCCATTGG+AGG | + | chr7_3:6757061-6757080 | Msa1091410:CDS | 40.0% | |
GAAGCCTAAGTATGTTCTCA+TGG | + | chr7_3:6757133-6757152 | Msa1091410:CDS | 40.0% | |
!! | AAATTTGCTGGTGGGTTTCT+GGG | + | chr7_3:6757176-6757195 | Msa1091410:CDS | 40.0% |
GATAATTCATGGCCACTAGA+CGG | - | chr7_3:6757217-6757236 | None:intergenic | 40.0% | |
TGGCCATGAATTATCAAGCT+CGG | + | chr7_3:6757222-6757241 | Msa1091410:CDS | 40.0% | |
! | CATCCGAGCTTGATAATTCA+TGG | - | chr7_3:6757228-6757247 | None:intergenic | 40.0% |
CATGAATTATCAAGCTCGGA+TGG | + | chr7_3:6757226-6757245 | Msa1091410:CDS | 40.0% | |
CATATGGCCTTCCTCAATTT+CGG | + | chr7_3:6757267-6757286 | Msa1091410:CDS | 40.0% | |
AAAACACGCATCCGAAATTG+AGG | - | chr7_3:6757281-6757300 | None:intergenic | 40.0% | |
! | TTCGGATGCGTGTTTTTCTT+TGG | + | chr7_3:6757285-6757304 | Msa1091410:CDS | 40.0% |
! | TCGGATGCGTGTTTTTCTTT+GGG | + | chr7_3:6757286-6757305 | Msa1091410:CDS | 40.0% |
! | GAGCTCTAACTACTGAAGTA+AGG | + | chr7_3:6757309-6757328 | Msa1091410:intron | 40.0% |
!! | TGAGTTGGTAACGGATATGA+GGG | - | chr7_3:6757441-6757460 | None:intergenic | 40.0% |
!! | ATGAGTTGGTAACGGATATG+AGG | - | chr7_3:6757442-6757461 | None:intergenic | 40.0% |
ATATCCGTTACCAACTCATG+AGG | + | chr7_3:6757443-6757462 | Msa1091410:CDS | 40.0% | |
!! | TCAACCTCATGAGTTGGTAA+CGG | - | chr7_3:6757450-6757469 | None:intergenic | 40.0% |
! | CAGCTGACACTTTTCATTAG+TGG | - | chr7_3:6757631-6757650 | None:intergenic | 40.0% |
!! | CACTAATGAAAAGTGTCAGC+TGG | + | chr7_3:6757629-6757648 | Msa1091410:CDS | 40.0% |
AGCAAAAACAACATACCGGT+GGG | - | chr7_3:6757692-6757711 | None:intergenic | 40.0% | |
AGCGATGATGAAAAGAGCTA+CGG | + | chr7_3:6757811-6757830 | Msa1091410:CDS | 40.0% | |
TGATCATACAGCATACCACT+TGG | - | chr7_3:6758242-6758261 | None:intergenic | 40.0% | |
GCAAACTCTCTCATAGTCAT+CGG | - | chr7_3:6758285-6758304 | None:intergenic | 40.0% | |
AGATATGGAACCTTCTCCTT+TGG | - | chr7_3:6758314-6758333 | None:intergenic | 40.0% | |
! | TTGTGCTTGCTTGCCTTTTT+AGG | + | chr7_3:6758387-6758406 | Msa1091410:intron | 40.0% |
! | TGTGCTTGCTTGCCTTTTTA+GGG | + | chr7_3:6758388-6758407 | Msa1091410:intron | 40.0% |
!! | TTTTTAGGGGGCAAACTTCA+GGG | + | chr7_3:6758402-6758421 | Msa1091410:intron | 40.0% |
! | TCTAAAATCTGGAAAGCCGT+TGG | + | chr7_3:6758489-6758508 | Msa1091410:CDS | 40.0% |
GTGTATCTGCTGAATACAAC+AGG | + | chr7_3:6758705-6758724 | Msa1091410:intron | 40.0% | |
TTGTGTCCACTGTTGTAACA+AGG | + | chr7_3:6758756-6758775 | Msa1091410:CDS | 40.0% | |
TGTGTCCACTGTTGTAACAA+GGG | + | chr7_3:6758757-6758776 | Msa1091410:CDS | 40.0% | |
CGAATAACAACCTGGTTATG+AGG | - | chr7_3:6758788-6758807 | None:intergenic | 40.0% | |
CACAACTTCGAATAACAACC+TGG | - | chr7_3:6758796-6758815 | None:intergenic | 40.0% | |
GAATGCTAAGAACTCTGTCT+TGG | - | chr7_3:6759082-6759101 | None:intergenic | 40.0% | |
TTAGCATTCGAGAGAATGCA+AGG | + | chr7_3:6759093-6759112 | Msa1091410:CDS | 40.0% | |
ACACATACCTCTGTTTGACA+GGG | - | chr7_3:6759154-6759173 | None:intergenic | 40.0% | |
AACACATACCTCTGTTTGAC+AGG | - | chr7_3:6759155-6759174 | None:intergenic | 40.0% | |
! | ACAGAGGTATGTGTTCAAAC+TGG | + | chr7_3:6759160-6759179 | Msa1091410:intron | 40.0% |
ACTGCTCAATAACTCTCCTA+AGG | + | chr7_3:6759452-6759471 | Msa1091410:intron | 40.0% | |
CTGCTCAATAACTCTCCTAA+GGG | + | chr7_3:6759453-6759472 | Msa1091410:intron | 40.0% | |
AAATTCTGGACTGATCCCTT+AGG | - | chr7_3:6759471-6759490 | None:intergenic | 40.0% | |
! | GGGATCAGTCCAGAATTTTT+AGG | + | chr7_3:6759473-6759492 | Msa1091410:intron | 40.0% |
TAATGTGTATCCAAGGGCAA+GGG | - | chr7_3:6759707-6759726 | None:intergenic | 40.0% | |
CCAAACCTAATGTGTATCCA+AGG | - | chr7_3:6759714-6759733 | None:intergenic | 40.0% | |
CCTTGGATACACATTAGGTT+TGG | + | chr7_3:6759711-6759730 | Msa1091410:CDS | 40.0% | |
TTAAAGGGGAGAGTTGTCAA+AGG | - | chr7_3:6759763-6759782 | None:intergenic | 40.0% | |
GACAACTTGGGTACTTAAAG+GGG | - | chr7_3:6759777-6759796 | None:intergenic | 40.0% | |
! | AGGAACGACTTCGTCTTGTT+TGG | - | chr7_3:6753997-6754016 | None:intergenic | 45.0% |
ATCTCCGGTTGAAGAAGAAC+TGG | + | chr7_3:6754046-6754065 | Msa1091410:CDS | 45.0% | |
CTTCGTCGGAGAACTTATTC+CGG | + | chr7_3:6754133-6754152 | Msa1091410:CDS | 45.0% | |
CACAAAAGAAATGGCCTCAC+CGG | + | chr7_3:6754165-6754184 | Msa1091410:CDS | 45.0% | |
CTCACTCGTTCTTAGTGTAC+CGG | - | chr7_3:6754187-6754206 | None:intergenic | 45.0% | |
GTTTCACTATCGTGAAGCGA+AGG | + | chr7_3:6754335-6754354 | Msa1091410:CDS | 45.0% | |
TATCGTGAAGCGAAGGTTGA+TGG | + | chr7_3:6754342-6754361 | Msa1091410:CDS | 45.0% | |
! | ATCGTGAAGCGAAGGTTGAT+GGG | + | chr7_3:6754343-6754362 | Msa1091410:CDS | 45.0% |
TTTGCCTAGCCGGAAATCAT+AGG | + | chr7_3:6754831-6754850 | Msa1091410:intron | 45.0% | |
TTGCCTAGCCGGAAATCATA+GGG | + | chr7_3:6754832-6754851 | Msa1091410:intron | 45.0% | |
! | GATGAATGTTGTTTAGGGGG+AGG | + | chr7_3:6755171-6755190 | Msa1091410:intron | 45.0% |
! | AATGTTGTTTAGGGGGAGGA+AGG | + | chr7_3:6755175-6755194 | Msa1091410:intron | 45.0% |
TGTGTGTGTGCAGGTGATTA+AGG | + | chr7_3:6755378-6755397 | Msa1091410:intron | 45.0% | |
TGCAGGTGATTAAGGACCAT+GGG | + | chr7_3:6755386-6755405 | Msa1091410:intron | 45.0% | |
! | CCGCATTTTTATCAGCTGCA+TGG | - | chr7_3:6755858-6755877 | None:intergenic | 45.0% |
CTGGATTTGTATTCTGGGTG+TGG | + | chr7_3:6755931-6755950 | Msa1091410:CDS | 45.0% | |
!! | ATGTCCACTGGTCTTTGCTT+TGG | + | chr7_3:6755958-6755977 | Msa1091410:CDS | 45.0% |
CCAAAACGTACGTGAGTTTC+TGG | - | chr7_3:6756167-6756186 | None:intergenic | 45.0% | |
! | CCAGAAACTCACGTACGTTT+TGG | + | chr7_3:6756164-6756183 | Msa1091410:intron | 45.0% |
AATTCAGGTGAGGAATGAGC+CGG | + | chr7_3:6756282-6756301 | Msa1091410:intron | 45.0% | |
TTGAATGCTGGTGAAGAAGC+TGG | + | chr7_3:6756391-6756410 | Msa1091410:CDS | 45.0% | |
AGATGATTCACCTGACTCTG+AGG | + | chr7_3:6756438-6756457 | Msa1091410:CDS | 45.0% | |
!! | ACCTGACTCTGAGGTATTTG+AGG | + | chr7_3:6756447-6756466 | Msa1091410:CDS | 45.0% |
ACCTCAAATACCTCAGAGTC+AGG | - | chr7_3:6756451-6756470 | None:intergenic | 45.0% | |
CCCAACGAAGATGAAAAACC+AGG | + | chr7_3:6756502-6756521 | Msa1091410:CDS | 45.0% | |
ACCCCTTCTTTCACCTCTAA+TGG | + | chr7_3:6756917-6756936 | Msa1091410:intron | 45.0% | |
!! | GAAATTTGCTGGTGGGTTTC+TGG | + | chr7_3:6757175-6757194 | Msa1091410:CDS | 45.0% |
!! | AATTTGCTGGTGGGTTTCTG+GGG | + | chr7_3:6757177-6757196 | Msa1091410:CDS | 45.0% |
! | CGGATGCGTGTTTTTCTTTG+GGG | + | chr7_3:6757287-6757306 | Msa1091410:CDS | 45.0% |
CTGGATTCAACCTCATGAGT+TGG | - | chr7_3:6757456-6757475 | None:intergenic | 45.0% | |
! | TGGCCAAGGCATTATACCTT+GGG | + | chr7_3:6757649-6757668 | Msa1091410:CDS | 45.0% |
GAGCAAAAACAACATACCGG+TGG | - | chr7_3:6757693-6757712 | None:intergenic | 45.0% | |
GCGATGATGAAAAGAGCTAC+GGG | + | chr7_3:6757812-6757831 | Msa1091410:CDS | 45.0% | |
ATGCAGTTCATATATGCGGC+TGG | - | chr7_3:6758042-6758061 | None:intergenic | 45.0% | |
GCCGAATAATTCACCATCTC+TGG | - | chr7_3:6758203-6758222 | None:intergenic | 45.0% | |
GAGAGTTTGCCACATTCCAA+AGG | + | chr7_3:6758295-6758314 | Msa1091410:CDS | 45.0% | |
TTGCCACATTCCAAAGGAGA+AGG | + | chr7_3:6758301-6758320 | Msa1091410:CDS | 45.0% | |
!! | GAACCTTCTCCTTTGGAATG+TGG | - | chr7_3:6758307-6758326 | None:intergenic | 45.0% |
! | GTGCTTGCTTGCCTTTTTAG+GGG | + | chr7_3:6758389-6758408 | Msa1091410:intron | 45.0% |
!! | TGCTTGCTTGCCTTTTTAGG+GGG | + | chr7_3:6758390-6758409 | Msa1091410:intron | 45.0% |
CTGAAGTTTGCCCCCTAAAA+AGG | - | chr7_3:6758403-6758422 | None:intergenic | 45.0% | |
!! | CTTTTTAGGGGGCAAACTTC+AGG | + | chr7_3:6758401-6758420 | Msa1091410:intron | 45.0% |
GCTGAATACAACAGGCCATT+TGG | + | chr7_3:6758713-6758732 | Msa1091410:intron | 45.0% | |
AACAACCTGGTTATGAGGCT+CGG | - | chr7_3:6758783-6758802 | None:intergenic | 45.0% | |
GTTTGGACCTGTTGTGTAAG+TGG | + | chr7_3:6758964-6758983 | Msa1091410:intron | 45.0% | |
! | AGTACTGCCACTTACACAAC+AGG | - | chr7_3:6758974-6758993 | None:intergenic | 45.0% |
GATGGAGAAGAGCCTAGATA+TGG | - | chr7_3:6759055-6759074 | None:intergenic | 45.0% | |
CTAAGAACTCTGTCTTGGTC+TGG | - | chr7_3:6759077-6759096 | None:intergenic | 45.0% | |
CCACAAAGCTTATAGCAGTC+TGG | - | chr7_3:6759131-6759150 | None:intergenic | 45.0% | |
CCAGACTGCTATAAGCTTTG+TGG | + | chr7_3:6759128-6759147 | Msa1091410:CDS | 45.0% | |
ATGTGCAGGTACATGCAAGT+TGG | + | chr7_3:6759658-6759677 | Msa1091410:intron | 45.0% | |
CTAATGTGTATCCAAGGGCA+AGG | - | chr7_3:6759708-6759727 | None:intergenic | 45.0% | |
CTTGCCCTTGGATACACATT+AGG | + | chr7_3:6759706-6759725 | Msa1091410:CDS | 45.0% | |
!! | ATTCTAGGACTCTCCGATGA+CGG | + | chr7_3:6759736-6759755 | Msa1091410:CDS | 45.0% |
AGTTGTCAAAGGACCGTCAT+CGG | - | chr7_3:6759752-6759771 | None:intergenic | 45.0% | |
! | GAGCGGGTTCAACAAAAGTG+CGG | + | chr7_3:6753787-6753806 | Msa1091410:five_prime_UTR | 50.0% |
! | AGCGGGTTCAACAAAAGTGC+GGG | + | chr7_3:6753788-6753807 | Msa1091410:five_prime_UTR | 50.0% |
! | TCGTTCTTAGTGTACCGGTG+AGG | - | chr7_3:6754182-6754201 | None:intergenic | 50.0% |
ACCCACCACCCTATGATTTC+CGG | - | chr7_3:6754843-6754862 | None:intergenic | 50.0% | |
! | CGATTGGTTCCCGAATGATG+TGG | - | chr7_3:6754930-6754949 | None:intergenic | 50.0% |
TTAGGGGGAGGAAGGAAAAG+AGG | + | chr7_3:6755183-6755202 | Msa1091410:intron | 50.0% | |
GTGCAGGTGATTAAGGACCA+TGG | + | chr7_3:6755385-6755404 | Msa1091410:intron | 50.0% | |
! | TAGGCCTGAGTGGACTTTAC+TGG | + | chr7_3:6755912-6755931 | Msa1091410:CDS | 50.0% |
TGCTCCAAAGCAAAGACCAG+TGG | - | chr7_3:6755965-6755984 | None:intergenic | 50.0% | |
GAAGAAGCTGGTGAAGAAGC+TGG | + | chr7_3:6756403-6756422 | Msa1091410:CDS | 50.0% | |
GGGCTCCCATGTATCATAAC+TGG | - | chr7_3:6756655-6756674 | None:intergenic | 50.0% | |
TGATACATGGGAGCCCATTG+AGG | + | chr7_3:6756659-6756678 | Msa1091410:CDS | 50.0% | |
GATACATGGGAGCCCATTGA+GGG | + | chr7_3:6756660-6756679 | Msa1091410:CDS | 50.0% | |
GTGGTGAGACTTACAGGAAG+AGG | - | chr7_3:6756874-6756893 | None:intergenic | 50.0% | |
TGAGGAGTGGTGAGACTTAC+AGG | - | chr7_3:6756880-6756899 | None:intergenic | 50.0% | |
CCACTAACACCTTGACAAGG+TGG | - | chr7_3:6757026-6757045 | None:intergenic | 50.0% | |
! | CCACCTTGTCAAGGTGTTAG+TGG | + | chr7_3:6757023-6757042 | Msa1091410:CDS | 50.0% |
!! | TTTCTGGGGCGTTATGCTGT+AGG | + | chr7_3:6757191-6757210 | Msa1091410:CDS | 50.0% |
TTATGCTGTAGGCCGTCTAG+TGG | + | chr7_3:6757202-6757221 | Msa1091410:CDS | 50.0% | |
TCAAGCTCGGATGGGAATGA+TGG | + | chr7_3:6757235-6757254 | Msa1091410:CDS | 50.0% | |
ATGATGGCTGCAGGGTCATA+TGG | + | chr7_3:6757251-6757270 | Msa1091410:CDS | 50.0% | |
CACGCATCCGAAATTGAGGA+AGG | - | chr7_3:6757277-6757296 | None:intergenic | 50.0% | |
CTCAGTAGGGATGACTGATC+TGG | - | chr7_3:6757475-6757494 | None:intergenic | 50.0% | |
!! | TGAAAAGTGTCAGCTGGCCA+AGG | + | chr7_3:6757635-6757654 | Msa1091410:CDS | 50.0% |
! | CTGGCCAAGGCATTATACCT+TGG | + | chr7_3:6757648-6757667 | Msa1091410:CDS | 50.0% |
! | GGCCAAGGCATTATACCTTG+GGG | + | chr7_3:6757650-6757669 | Msa1091410:CDS | 50.0% |
GTCCCCAAGGTATAATGCCT+TGG | - | chr7_3:6757655-6757674 | None:intergenic | 50.0% | |
GATCATCAATTGCGTCCCCA+AGG | - | chr7_3:6757668-6757687 | None:intergenic | 50.0% | |
! | CGCAATTGATGATCTCCCAC+CGG | + | chr7_3:6757674-6757693 | Msa1091410:CDS | 50.0% |
GACTCTCAAAGTGCACCAAG+TGG | + | chr7_3:6758224-6758243 | Msa1091410:CDS | 50.0% | |
CTTTAACTAGCACACCCTCG+AGG | - | chr7_3:6758429-6758448 | None:intergenic | 50.0% | |
! | ACAGGCCATTTGGTCGACTT+TGG | + | chr7_3:6758723-6758742 | Msa1091410:intron | 50.0% |
! | GCCATTTGGTCGACTTTGGT+GGG | + | chr7_3:6758727-6758746 | Msa1091410:CDS | 50.0% |
TCCCACCAAAGTCGACCAAA+TGG | - | chr7_3:6758731-6758750 | None:intergenic | 50.0% | |
GAGGGTAGCATAAGTGGCAT+TGG | - | chr7_3:6758838-6758857 | None:intergenic | 50.0% | |
CAATGGGAGGGTAGCATAAG+TGG | - | chr7_3:6758844-6758863 | None:intergenic | 50.0% | |
GAACTCTGTCTTGGTCTGGA+TGG | - | chr7_3:6759073-6759092 | None:intergenic | 50.0% | |
CGAGAGAATGCAAGGCTACA+AGG | + | chr7_3:6759101-6759120 | Msa1091410:CDS | 50.0% | |
TTTGTGGCCCTGTCAAACAG+AGG | + | chr7_3:6759144-6759163 | Msa1091410:CDS | 50.0% | |
!! | AAGGACGGGCTAGACAACTT+GGG | - | chr7_3:6759789-6759808 | None:intergenic | 50.0% |
!! | AAAGGACGGGCTAGACAACT+TGG | - | chr7_3:6759790-6759809 | None:intergenic | 50.0% |
TCCGACGATGCATGCTTCGT+CGG | + | chr7_3:6754119-6754138 | Msa1091410:CDS | 55.0% | |
TCCGACGAAGCATGCATCGT+CGG | - | chr7_3:6754123-6754142 | None:intergenic | 55.0% | |
CCACCCTATGATTTCCGGCT+AGG | - | chr7_3:6754838-6754857 | None:intergenic | 55.0% | |
CCTAGCCGGAAATCATAGGG+TGG | + | chr7_3:6754835-6754854 | Msa1091410:intron | 55.0% | |
AGCCGGAAATCATAGGGTGG+TGG | + | chr7_3:6754838-6754857 | Msa1091410:intron | 55.0% | |
GCCGGAAATCATAGGGTGGT+GGG | + | chr7_3:6754839-6754858 | Msa1091410:intron | 55.0% | |
TGACTTGAAGAGATGGGCCG+TGG | + | chr7_3:6756100-6756119 | Msa1091410:intron | 55.0% | |
GGATGGGAATGATGGCTGCA+GGG | + | chr7_3:6757243-6757262 | Msa1091410:CDS | 55.0% | |
GCAAACTTCAGGGACCTCGA+GGG | + | chr7_3:6758412-6758431 | Msa1091410:CDS | 55.0% | |
! | GGCCATTTGGTCGACTTTGG+TGG | + | chr7_3:6758726-6758745 | Msa1091410:intron | 55.0% |
CTCGGCCCTTGTTACAACAG+TGG | - | chr7_3:6758765-6758784 | None:intergenic | 55.0% | |
TATCCAAGGGCAAGGGCAAC+AGG | - | chr7_3:6759700-6759719 | None:intergenic | 55.0% | |
GGGTGTGGAGCTATGTCCAC+TGG | + | chr7_3:6755946-6755965 | Msa1091410:CDS | 60.0% | |
!! | TGTGGTGGGCCACCTTGTCA+AGG | + | chr7_3:6757014-6757033 | Msa1091410:CDS | 60.0% |
CGGATGGGAATGATGGCTGC+AGG | + | chr7_3:6757242-6757261 | Msa1091410:CDS | 60.0% | |
GGCAAACTTCAGGGACCTCG+AGG | + | chr7_3:6758411-6758430 | Msa1091410:CDS | 60.0% | |
AAGGGCCGAGCCTCATAACC+AGG | + | chr7_3:6758775-6758794 | Msa1091410:CDS | 60.0% | |
GTTCCTGTTGCCCTTGCCCT+TGG | + | chr7_3:6759694-6759713 | Msa1091410:CDS | 60.0% | |
GGGAGCCCATTGAGGGCTTG+AGG | + | chr7_3:6756667-6756686 | Msa1091410:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 6753779 | 6760079 | 6753779 | ID=Msa1091410;Name=Msa1091410 |
chr7_3 | mRNA | 6753779 | 6760079 | 6753779 | ID=Msa1091410-mRNA-1;Parent=Msa1091410;Name=Msa1091410-mRNA-1;_AED=0.14;_eAED=0.14;_QI=187|1|1|1|1|1|20|239|831 |
chr7_3 | exon | 6753779 | 6754201 | 6753779 | ID=Msa1091410-mRNA-1:exon:2078;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6754302 | 6754401 | 6754302 | ID=Msa1091410-mRNA-1:exon:2079;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6755187 | 6755294 | 6755187 | ID=Msa1091410-mRNA-1:exon:2080;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6755391 | 6755510 | 6755391 | ID=Msa1091410-mRNA-1:exon:2081;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6755604 | 6755694 | 6755604 | ID=Msa1091410-mRNA-1:exon:2082;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6755800 | 6756011 | 6755800 | ID=Msa1091410-mRNA-1:exon:2083;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6756110 | 6756175 | 6756110 | ID=Msa1091410-mRNA-1:exon:2084;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6756289 | 6756537 | 6756289 | ID=Msa1091410-mRNA-1:exon:2085;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6756630 | 6756688 | 6756630 | ID=Msa1091410-mRNA-1:exon:2086;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6756813 | 6756879 | 6756813 | ID=Msa1091410-mRNA-1:exon:2087;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6756996 | 6757325 | 6756996 | ID=Msa1091410-mRNA-1:exon:2088;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6757432 | 6757500 | 6757432 | ID=Msa1091410-mRNA-1:exon:2089;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6757609 | 6757695 | 6757609 | ID=Msa1091410-mRNA-1:exon:2090;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6757796 | 6757883 | 6757796 | ID=Msa1091410-mRNA-1:exon:2091;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6758204 | 6758322 | 6758204 | ID=Msa1091410-mRNA-1:exon:2092;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6758409 | 6758510 | 6758409 | ID=Msa1091410-mRNA-1:exon:2093;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6758592 | 6758635 | 6758592 | ID=Msa1091410-mRNA-1:exon:2094;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6758727 | 6758796 | 6758727 | ID=Msa1091410-mRNA-1:exon:2095;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6759062 | 6759165 | 6759062 | ID=Msa1091410-mRNA-1:exon:2096;Parent=Msa1091410-mRNA-1 |
chr7_3 | exon | 6759666 | 6760079 | 6759666 | ID=Msa1091410-mRNA-1:exon:2097;Parent=Msa1091410-mRNA-1 |
chr7_3 | five_prime_UTR | 6753779 | 6753965 | 6753779 | ID=Msa1091410-mRNA-1:five_prime_utr;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6753966 | 6754201 | 6753966 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6754302 | 6754401 | 6754302 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6755187 | 6755294 | 6755187 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6755391 | 6755510 | 6755391 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6755604 | 6755694 | 6755604 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6755800 | 6756011 | 6755800 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6756110 | 6756175 | 6756110 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6756289 | 6756537 | 6756289 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6756630 | 6756688 | 6756630 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6756813 | 6756879 | 6756813 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6756996 | 6757325 | 6756996 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6757432 | 6757500 | 6757432 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6757609 | 6757695 | 6757609 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6757796 | 6757883 | 6757796 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6758204 | 6758322 | 6758204 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6758409 | 6758510 | 6758409 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6758592 | 6758635 | 6758592 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6758727 | 6758796 | 6758727 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6759062 | 6759165 | 6759062 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | CDS | 6759666 | 6759840 | 6759666 | ID=Msa1091410-mRNA-1:cds;Parent=Msa1091410-mRNA-1 |
chr7_3 | three_prime_UTR | 6759841 | 6760079 | 6759841 | ID=Msa1091410-mRNA-1:three_prime_utr;Parent=Msa1091410-mRNA-1 |
Gene Sequence |
Protein sequence |