AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1083380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1083380 MtrunA17_Chr7g0271411 88.924 316 24 2 1 316 1 305 2.11e-162 454
Msa1083380 MtrunA17_Chr1g0193131 56.388 227 64 10 42 240 279 498 3.74e-49 173
Msa1083380 MtrunA17_Chr3g0096451 62.385 109 38 1 137 245 91 196 3.67e-38 136
Msa1083380 MtrunA17_Chr5g0443331 57.600 125 51 1 137 261 86 208 6.09e-38 135
Msa1083380 MtrunA17_Chr2g0304061 62.069 87 32 1 161 247 158 243 1.30e-31 120
Msa1083380 MtrunA17_Chr8g0381081 46.903 113 52 3 139 246 34 143 7.99e-28 106
Msa1083380 MtrunA17_Chr1g0177171 40.667 150 80 4 102 246 347 492 1.76e-26 108
Msa1083380 MtrunA17_Chr8g0378361 47.967 123 61 3 159 280 28 148 1.92e-26 103
Msa1083380 MtrunA17_Chr4g0040911 46.774 124 47 3 161 281 37 144 1.87e-25 100
Msa1083380 MtrunA17_Chr5g0401301 41.667 144 72 4 105 244 279 414 1.88e-25 105
Msa1083380 MtrunA17_Chr4g0075031 51.613 93 44 1 154 245 375 467 6.49e-25 104
Msa1083380 MtrunA17_Chr8g0378621 38.125 160 75 4 154 308 357 497 1.04e-24 103
Msa1083380 MtrunA17_Chr8g0378371 54.545 88 37 2 160 247 32 116 4.38e-24 94.7
Msa1083380 MtrunA17_Chr8g0380231 59.155 71 29 0 168 238 24 94 5.14e-22 89.0
Msa1083380 MtrunA17_Chr1g0154991 47.706 109 46 5 147 252 8 108 6.39e-22 88.6
Msa1083380 MtrunA17_Chr8g0378381 50.562 89 38 3 160 245 31 116 6.60e-22 89.0
Msa1083380 MtrunA17_Chr5g0447651 49.412 85 42 1 161 244 30 114 1.90e-21 87.8
Msa1083380 MtrunA17_Chr5g0434591 42.056 107 61 1 154 259 353 459 1.92e-21 94.4
Msa1083380 MtrunA17_Chr3g0121271 37.226 137 69 3 148 283 349 469 3.15e-21 94.0
Msa1083380 MtrunA17_Chr5g0439251 47.253 91 47 1 154 243 375 465 5.19e-21 93.2
Msa1083380 MtrunA17_Chr3g0110371 43.299 97 54 1 154 249 354 450 6.51e-21 92.8
Msa1083380 MtrunA17_Chr4g0034901 43.860 114 54 3 143 248 352 463 2.60e-20 90.9
Msa1083380 MtrunA17_Chr4g0043511 47.778 90 45 2 160 248 419 507 3.75e-20 90.9
Msa1083380 MtrunA17_Chr3g0120401 45.977 87 45 2 161 246 157 242 4.28e-20 87.4
Msa1083380 MtrunA17_Chr5g0419121 47.368 95 46 3 156 247 17 110 4.97e-20 87.8
Msa1083380 MtrunA17_Chr8g0378401 50.602 83 35 3 160 239 31 110 2.25e-19 82.4
Msa1083380 MtrunA17_Chr4g0076131 41.379 87 50 1 160 245 27 113 4.67e-19 81.3
Msa1083380 MtrunA17_Chr4g0076141 44.304 79 43 1 161 238 13 91 6.06e-19 80.5
Msa1083380 MtrunA17_Chr1g0161011 43.564 101 55 2 154 253 354 453 8.69e-19 86.7
Msa1083380 MtrunA17_Chr6g0487261 40.541 111 61 4 136 244 347 454 3.54e-18 84.7
Msa1083380 MtrunA17_Chr1g0213651 44.706 85 45 2 161 244 276 359 5.00e-18 83.6
Msa1083380 MtrunA17_Chr4g0043151 44.118 102 54 3 161 260 21 121 4.79e-17 78.2
Msa1083380 MtrunA17_Chr8g0389741 32.168 143 90 3 136 277 348 484 5.52e-17 81.3
Msa1083380 MtrunA17_Chr2g0313891 44.186 86 45 2 160 244 29 112 1.75e-16 74.3
Msa1083380 MtrunA17_Chr3g0144531 40.385 104 56 3 144 244 354 454 2.70e-16 79.3
Msa1083380 MtrunA17_Chr7g0234821 38.983 118 67 3 133 248 348 462 3.31e-16 79.0
Msa1083380 MtrunA17_Chr8g0339191 36.082 97 61 1 152 247 365 461 4.54e-16 78.6
Msa1083380 MtrunA17_Chr4g0061401 43.396 106 57 3 157 261 20 123 1.26e-15 74.7
Msa1083380 MtrunA17_Chr2g0306311 40.816 98 53 4 160 255 398 492 1.52e-13 70.9
Msa1083380 MtrunA17_Chr7g0223961 41.379 87 45 3 159 242 363 446 1.63e-13 70.9
Msa1083380 MtrunA17_Chr3g0129341 35.714 112 62 5 141 245 348 456 1.05e-12 68.6
Msa1083380 MtrunA17_Chr4g0062771 39.773 88 48 4 160 245 373 457 4.17e-12 66.6
Msa1083380 MtrunA17_Chr4g0046311 36.905 84 52 1 157 239 369 452 1.24e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1083380 AT1G09460.1 59.375 128 48 2 121 248 99 222 2.50e-37 136
Msa1083380 AT2G30933.1 61.798 89 34 0 160 248 81 169 8.35e-34 124
Msa1083380 AT1G29380.3 58.889 90 37 0 160 249 147 236 1.24e-32 122
Msa1083380 AT1G29380.1 58.824 85 35 0 160 244 147 231 2.77e-31 119
Msa1083380 AT2G30933.2 62.025 79 30 0 160 238 81 159 2.11e-30 113
Msa1083380 AT2G30933.3 62.025 79 30 0 160 238 81 159 2.11e-30 113
Msa1083380 AT1G29380.4 58.750 80 33 0 160 239 147 226 4.35e-29 111
Msa1083380 AT1G29380.2 58.750 80 33 0 160 239 147 226 4.35e-29 111
Msa1083380 AT1G11820.2 46.154 130 64 3 148 275 368 493 1.93e-27 112
Msa1083380 AT3G58100.1 44.531 128 63 3 161 280 41 168 3.87e-27 105
Msa1083380 AT4G05430.3 45.133 113 57 2 141 248 24 136 4.92e-27 104
Msa1083380 AT4G05430.1 49.462 93 46 1 157 248 19 111 6.76e-27 103
Msa1083380 AT3G58100.2 44.531 128 63 3 161 280 117 244 8.25e-27 106
Msa1083380 AT4G05430.2 47.115 104 50 2 141 239 24 127 3.97e-25 98.2
Msa1083380 AT2G01630.1 44.340 106 58 1 154 258 353 458 6.61e-25 104
Msa1083380 AT4G26830.1 43.590 117 53 2 131 246 349 453 1.08e-24 103
Msa1083380 AT4G26830.2 43.590 117 53 2 131 246 353 457 1.20e-24 103
Msa1083380 AT1G66250.1 38.562 153 77 5 154 303 361 499 1.36e-24 103
Msa1083380 AT5G55180.1 52.222 90 42 1 158 246 369 458 2.20e-24 103
Msa1083380 AT2G05790.1 33.750 240 138 8 23 246 236 470 3.52e-24 102
Msa1083380 AT4G13600.1 45.038 131 60 4 161 280 61 190 4.64e-24 98.6
Msa1083380 AT5G35740.1 47.368 95 46 3 154 245 23 116 9.98e-24 94.4
Msa1083380 AT1G18650.1 46.237 93 48 2 157 248 17 108 2.96e-22 92.4
Msa1083380 AT1G11820.3 50.538 93 45 1 148 239 368 460 3.38e-22 97.1
Msa1083380 AT1G18650.2 46.237 93 48 2 157 248 17 108 3.59e-22 90.5
Msa1083380 AT5G55180.2 53.012 83 38 1 158 239 369 451 1.58e-21 95.1
Msa1083380 AT5G67460.1 38.571 140 70 5 113 244 246 377 2.91e-21 93.6
Msa1083380 AT4G34480.3 47.674 86 43 2 161 245 253 337 5.16e-21 92.8
Msa1083380 AT4G34480.1 47.674 86 43 2 161 245 364 448 6.80e-21 93.2
Msa1083380 AT2G01630.3 46.512 86 45 1 154 238 353 438 3.64e-20 90.9
Msa1083380 AT5G67460.2 38.519 135 67 5 113 239 246 372 9.23e-20 89.4
Msa1083380 AT2G16230.1 43.519 108 54 3 161 267 366 467 1.13e-19 89.7
Msa1083380 AT5G24318.3 41.121 107 57 3 141 246 217 318 1.18e-19 88.2
Msa1083380 AT5G24318.1 41.121 107 57 3 141 246 356 457 1.93e-19 89.0
Msa1083380 AT3G55430.1 42.553 94 52 2 152 244 357 449 2.16e-19 88.6
Msa1083380 AT5G63240.1 38.393 112 62 4 139 246 20 128 1.06e-18 81.3
Msa1083380 AT5G63250.1 40.816 98 53 3 153 246 34 130 1.36e-18 80.9
Msa1083380 AT1G66870.1 38.298 94 55 2 153 244 18 110 3.50e-18 79.3
Msa1083380 AT1G66870.2 38.298 94 55 2 153 244 45 137 4.01e-18 79.7
Msa1083380 AT2G04910.2 40.860 93 54 1 154 245 8 100 4.42e-18 78.6
Msa1083380 AT1G79480.1 44.706 85 45 2 161 244 311 394 6.55e-18 84.0
Msa1083380 AT1G79480.2 44.706 85 45 2 161 244 310 393 6.63e-18 84.0
Msa1083380 AT5G24318.2 42.424 99 51 3 141 238 356 449 1.06e-17 83.6
Msa1083380 AT1G66852.1 34.783 92 60 0 153 244 18 109 1.40e-17 77.4
Msa1083380 AT5G63225.1 41.860 86 48 2 160 244 24 108 1.68e-17 77.4
Msa1083380 AT2G43660.2 41.758 91 52 1 159 248 33 123 3.40e-17 77.0
Msa1083380 AT2G43660.1 41.758 91 52 1 159 248 32 122 3.78e-17 76.6
Msa1083380 AT4G16165.1 38.710 93 56 1 153 244 18 110 3.86e-17 76.3
Msa1083380 AT2G39640.1 35.246 122 68 3 136 247 426 546 7.49e-17 81.6
Msa1083380 AT2G39640.1 40.659 91 52 2 153 242 351 440 1.92e-14 74.3
Msa1083380 AT1G69295.1 45.349 86 44 3 157 241 17 100 9.58e-17 78.2
Msa1083380 AT2G43670.1 40.426 94 53 2 153 245 27 118 9.99e-17 75.5
Msa1083380 AT5G56590.1 36.036 111 70 1 161 270 369 479 1.08e-16 80.9
Msa1083380 AT4G09465.1 40.217 92 53 2 156 246 26 116 1.12e-16 75.1
Msa1083380 AT4G09464.1 40.217 92 53 2 156 246 26 116 1.25e-16 75.1
Msa1083380 AT4G09467.1 40.217 92 53 2 156 246 26 116 1.25e-16 75.1
Msa1083380 AT1G66855.1 37.234 94 58 1 152 244 17 110 1.46e-16 74.7
Msa1083380 AT4G09462.1 40.217 92 53 2 156 246 24 114 1.57e-16 74.7
Msa1083380 AT5G08000.2 48.387 93 46 2 154 245 33 124 1.59e-16 77.4
Msa1083380 AT3G23770.1 39.048 105 60 2 145 248 374 475 2.08e-16 80.1
Msa1083380 AT1G69295.2 45.349 86 44 3 157 241 13 96 2.95e-16 76.6
Msa1083380 AT2G04910.1 41.379 87 50 1 154 239 8 94 2.97e-16 74.3
Msa1083380 AT4G09466.1 40.217 92 53 2 156 246 26 116 3.60e-16 73.9
Msa1083380 AT4G29360.2 35.714 112 71 1 160 270 400 511 3.87e-16 79.3
Msa1083380 AT4G29360.1 35.714 112 71 1 160 270 390 501 4.30e-16 79.3
Msa1083380 AT5G61130.1 43.333 90 49 2 157 245 17 105 5.39e-16 75.5
Msa1083380 AT4G09090.1 41.304 92 52 2 156 246 26 116 5.86e-16 73.2
Msa1083380 AT5G08000.1 48.276 87 43 2 160 245 20 105 1.53e-15 74.3
Msa1083380 AT3G13560.4 40.625 96 56 1 161 255 362 457 1.53e-15 77.4
Msa1083380 AT3G13560.1 40.625 96 56 1 161 255 362 457 1.53e-15 77.4
Msa1083380 AT3G13560.2 40.625 96 56 1 161 255 362 457 1.53e-15 77.4
Msa1083380 AT3G13560.5 40.625 96 56 1 161 255 362 457 1.53e-15 77.4
Msa1083380 AT3G13560.3 40.625 96 56 1 161 255 362 457 1.53e-15 77.4
Msa1083380 AT5G53600.1 39.785 93 53 2 153 244 21 111 1.92e-15 71.6
Msa1083380 AT5G63230.1 37.209 86 52 2 160 244 25 109 8.92e-15 69.7
Msa1083380 AT2G42930.1 39.241 79 47 1 161 239 40 117 9.21e-15 70.5
Msa1083380 AT1G78520.1 42.529 87 47 2 160 245 31 115 9.97e-15 69.7
Msa1083380 AT1G26450.1 45.455 77 39 3 157 232 17 91 1.50e-14 71.6
Msa1083380 AT4G14080.1 35.897 117 67 3 137 248 364 477 1.75e-14 74.3
Msa1083380 AT2G03505.3 36.458 96 57 3 157 249 17 111 3.52e-14 68.6
Msa1083380 AT2G03505.4 36.170 94 56 3 157 247 17 109 4.24e-14 69.7
Msa1083380 AT2G03505.1 36.170 94 56 3 157 247 17 109 4.24e-14 69.7
Msa1083380 AT2G03505.2 36.170 94 56 3 157 247 17 109 4.24e-14 69.7
Msa1083380 AT5G53610.1 41.176 85 47 2 161 244 28 110 1.12e-13 67.0
Msa1083380 AT3G07320.1 39.785 93 55 1 157 248 367 459 1.35e-13 71.6
Msa1083380 AT1G13830.2 43.373 83 40 4 158 238 32 109 8.01e-13 67.0
Msa1083380 AT1G13830.1 43.750 80 38 4 161 238 21 95 1.63e-12 65.9
Msa1083380 AT3G04010.1 41.935 93 48 4 160 249 373 462 8.76e-12 66.2
Msa1083380 AT4G17180.1 38.372 86 49 3 160 244 358 440 1.14e-11 65.9
Msa1083380 AT5G58090.1 41.573 89 46 4 160 245 361 446 1.28e-11 65.5
Msa1083380 AT2G29735.1 35.870 92 55 3 156 244 26 116 7.47e-11 59.3

Find 113 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGAAAGAAATAGTGTTTC+TGG 0.164781 7_2:+83663195 None:intergenic
ACATCATCTCCAGTAGGTTT+TGG 0.266537 7_2:-83661352 Msa1083380:CDS
GCTGGATTTGTTGGTGATAA+TGG 0.267994 7_2:+83662780 None:intergenic
TTTGCTAAGCTGCATGGTTC+TGG 0.314068 7_2:-83661281 Msa1083380:CDS
AGTCCTCCATCTTCTTCTTC+AGG 0.320635 7_2:-83662624 Msa1083380:CDS
TGCATCTTCCCATCAGCTTC+AGG 0.344512 7_2:-83662254 Msa1083380:CDS
GCAGGCACAGGCACAGGCAC+AGG 0.353689 7_2:-83662218 Msa1083380:CDS
AGGAAGGAGTATTGAAGCTT+TGG 0.355745 7_2:-83663528 Msa1083380:five_prime_UTR
TTGTAACAGATCACAAGATT+TGG 0.357056 7_2:-83662935 Msa1083380:CDS
AGTGTAGATTGTGGTGTTCC+AGG 0.362624 7_2:+83662579 None:intergenic
AATATGTTTCTTTGATACTA+AGG 0.363586 7_2:+83663417 None:intergenic
GGCACAGGCACAGGCACATC+CGG 0.370939 7_2:-83662197 Msa1083380:CDS
CCACCACCATCACCATTATC+AGG 0.376324 7_2:-83662693 Msa1083380:CDS
GTTCCTGTTCCTCCTGATAA+TGG 0.379708 7_2:+83662681 None:intergenic
ACCTTTATACCTTTAGTTCA+AGG 0.379755 7_2:-83663326 Msa1083380:five_prime_UTR
GGTGAATTTGCTGGATTTGT+TGG 0.382630 7_2:+83662771 None:intergenic
CATGGTTCTGGTGACATTAT+TGG 0.382811 7_2:-83661269 Msa1083380:CDS
GCTGCAACAAGCTGTGACTT+TGG 0.388632 7_2:-83662417 Msa1083380:CDS
TTGGATTCCTCTCATTCAAC+TGG 0.389358 7_2:-83661313 Msa1083380:CDS
TCCTTGAACTAAAGGTATAA+AGG 0.392920 7_2:+83663325 None:intergenic
GGAACTGTTGGTGGTGTAAC+AGG 0.393025 7_2:+83662744 None:intergenic
AGATAACGCACTTTGTATAA+AGG 0.400169 7_2:-83663548 Msa1083380:five_prime_UTR
AAGGCCTATCCTTGAACTAA+AGG 0.401117 7_2:+83663317 None:intergenic
AGTGTTTCTGGAATTTAGAA+TGG 0.403661 7_2:+83663207 None:intergenic
ACAGGCACAGGCACAGGCAC+AGG 0.413493 7_2:-83662206 Msa1083380:CDS
ACAGGCACAGGCACAGGCAC+AGG 0.413493 7_2:-83662212 Msa1083380:CDS
GGAGGAGCTGGCGCAGGCAC+AGG 0.414477 7_2:-83662230 Msa1083380:CDS
CTTCTTCTTCAGGAGGTAGC+TGG 0.414888 7_2:-83662614 Msa1083380:CDS
GCTGGCGCAGGCACAGGCAC+AGG 0.415709 7_2:-83662224 Msa1083380:CDS
TACAAAGAAAGAAACAATAA+AGG 0.417834 7_2:-83663501 Msa1083380:five_prime_UTR
GACTATGCTTGTGGAACAAA+AGG 0.417962 7_2:-83662543 Msa1083380:CDS
TTCACTGGTGTTGTTCCTCC+TGG 0.427069 7_2:+83662723 None:intergenic
GAACTAAAGGTATAAAGGTT+AGG 0.428488 7_2:+83663330 None:intergenic
TGAACAGATGTTGGTCTATG+AGG 0.430750 7_2:+83663620 None:intergenic
GATGCAAGTAGAAGCTTCAT+TGG 0.437577 7_2:+83663168 None:intergenic
GTTACACCACCAACAGTTCC+AGG 0.439114 7_2:-83662741 Msa1083380:CDS
ACAGGTACTGGTGAATTTGC+TGG 0.439151 7_2:+83662762 None:intergenic
AAGTCACAGCTTGTTGCAGC+AGG 0.460540 7_2:+83662420 None:intergenic
GTTGTTCCTCCTGGAACTGT+TGG 0.460619 7_2:+83662732 None:intergenic
TGAGCACAGAAACCACTTTG+TGG 0.460862 7_2:+83663678 None:intergenic
AAACACTATTTCTTTCATCA+TGG 0.461974 7_2:-83663191 Msa1083380:exon
TCAGCTTCAGGAGGAGGAGC+TGG 0.463929 7_2:-83662242 Msa1083380:CDS
GGTGTTGCACCTGGATTTGT+TGG 0.466876 7_2:+83662837 None:intergenic
GGAATTTAGAATGGAGCTGT+TGG 0.469798 7_2:+83663216 None:intergenic
ACAGCTGGTGGAGTAGTAGA+AGG 0.473175 7_2:+83662804 None:intergenic
AGAAGAAAATGAGAAAAGAT+AGG 0.477075 7_2:+83663140 None:intergenic
CAGTGATGATTGTTGGTGAT+GGG 0.480237 7_2:+83662892 None:intergenic
AGCTGGTGTGTGGCTAAACC+TGG 0.480971 7_2:-83662597 Msa1083380:CDS
GTTCCTCCTGGAACTGTTGG+TGG 0.482015 7_2:+83662735 None:intergenic
TGGGCCGCAAAGCTCTCCAT+TGG 0.483468 7_2:-83661332 Msa1083380:CDS
TCACCATTATCAGGAGGAAC+AGG 0.487525 7_2:-83662684 Msa1083380:CDS
TTCCCATCAGCTTCAGGAGG+AGG 0.492744 7_2:-83662248 Msa1083380:CDS
TCAGGAGGAGGAGCTGGCGC+AGG 0.502820 7_2:-83662236 Msa1083380:CDS
CTTTGCGGCCCAAAACCTAC+TGG 0.504420 7_2:+83661343 None:intergenic
CAACAAGCTGTGACTTTGGA+GGG 0.506706 7_2:-83662413 Msa1083380:CDS
ATCTACACTTCAAACAGCAT+TGG 0.509235 7_2:-83662565 Msa1083380:CDS
GATGTTGGTCTATGAGGGAC+TGG 0.516447 7_2:+83663626 None:intergenic
AGAAATAGTTGAAAATGCAT+TGG 0.517953 7_2:+83663010 None:intergenic
GATGGAGGACTTGTGCTTGA+AGG 0.519243 7_2:+83662636 None:intergenic
GAGACCTTTGCTAAGCTGCA+TGG 0.522316 7_2:-83661287 Msa1083380:CDS
TATACCTTTAGTTCAAGGAT+AGG 0.525984 7_2:-83663321 Msa1083380:five_prime_UTR
GAAGGAACAGTGATGATTGT+TGG 0.527796 7_2:+83662885 None:intergenic
GCAACAAGCTGTGACTTTGG+AGG 0.530607 7_2:-83662414 Msa1083380:CDS
GAAGGTGGAGGATTTGTGAC+AGG 0.530909 7_2:+83662654 None:intergenic
GTTGGAGAAACTGTTGTGAC+AGG 0.533113 7_2:+83662855 None:intergenic
GAATCCAATGGAGAGCTTTG+CGG 0.535900 7_2:+83661328 None:intergenic
CCTGATAATGGTGATGGTGG+TGG 0.538366 7_2:+83662693 None:intergenic
CTCCTCCTCCTGAAGCTGAT+GGG 0.539809 7_2:+83662246 None:intergenic
TGAAGCTGATGGGAAGATGC+AGG 0.543799 7_2:+83662256 None:intergenic
CTACCTCCTGAAGAAGAAGA+TGG 0.552545 7_2:+83662618 None:intergenic
ACAGTGATGATTGTTGGTGA+TGG 0.553424 7_2:+83662891 None:intergenic
GTTCCTCCTGATAATGGTGA+TGG 0.553903 7_2:+83662687 None:intergenic
GCTCCTCCTCCTGAAGCTGA+TGG 0.558816 7_2:+83662245 None:intergenic
GGACTTGTGCTTGAAGGTGG+AGG 0.559600 7_2:+83662642 None:intergenic
GTTGGTGATAATGGAACAGC+TGG 0.559840 7_2:+83662789 None:intergenic
GTAGTAGAAGGAACTGTGAC+AGG 0.561662 7_2:+83662816 None:intergenic
GAACAGATGTTGGTCTATGA+GGG 0.564667 7_2:+83663621 None:intergenic
CAGGCACAGGCACATCCGGC+GGG 0.564968 7_2:-83662193 Msa1083380:intron
ACAGTTTCTCCAACAAATCC+AGG 0.567466 7_2:-83662846 Msa1083380:CDS
TTCAGGAGGTAGCTGGTGTG+TGG 0.575773 7_2:-83662607 Msa1083380:CDS
GTTGGTGGTGTAACAGGTAC+TGG 0.587227 7_2:+83662750 None:intergenic
ACTGTGACAGGTGTTGCACC+TGG 0.594459 7_2:+83662828 None:intergenic
GCATTGAATTGAACAGATGT+TGG 0.596828 7_2:+83663611 None:intergenic
ATTAACCATAAGCCACAAAG+TGG 0.598022 7_2:-83663690 None:intergenic
GTTGTGACAGGATTGGTTGA+AGG 0.600451 7_2:+83662867 None:intergenic
AACGCACTTTGTATAAAGGA+AGG 0.603570 7_2:-83663544 Msa1083380:five_prime_UTR
ACAGCATTGGACTATGCTTG+TGG 0.604056 7_2:-83662552 Msa1083380:CDS
CCTCCATCTTCTTCTTCAGG+AGG 0.605110 7_2:-83662621 Msa1083380:CDS
AACAAGCTGTGACTTTGGAG+GGG 0.609446 7_2:-83662412 Msa1083380:CDS
AGAAACTGTTGTGACAGGAT+TGG 0.611206 7_2:+83662860 None:intergenic
CCTCCTGATAATGGTGATGG+TGG 0.614026 7_2:+83662690 None:intergenic
TTATTGGTCAGTGGAAGACT+CGG 0.614232 7_2:-83661253 Msa1083380:CDS
TGTTGAATGCAAAAGAAGCA+TGG 0.614920 7_2:+83662460 None:intergenic
GATTGTAACAGCTACCACCT+TGG 0.617114 7_2:+83662499 None:intergenic
GTTGAATGAGAGGAATCCAA+TGG 0.618258 7_2:+83661316 None:intergenic
CTGGTGACATTATTGGTCAG+TGG 0.619927 7_2:-83661262 Msa1083380:CDS
AGAACCATGCAGCTTAGCAA+AGG 0.620135 7_2:+83661283 None:intergenic
TCTCAGACCAGTTGAATGAG+AGG 0.621991 7_2:+83661306 None:intergenic
ACAGGCACAGGCACATCCGG+CGG 0.622496 7_2:-83662194 Msa1083380:CDS
GGAGGACTTGTGCTTGAAGG+TGG 0.626099 7_2:+83662639 None:intergenic
ATCTTCCCATCAGCTTCAGG+AGG 0.632762 7_2:-83662251 Msa1083380:CDS
GGTGATAATGGAACAGCTGG+TGG 0.636040 7_2:+83662792 None:intergenic
GGTGGTGGATAAGAATTCAC+TGG 0.638656 7_2:+83662708 None:intergenic
GTGGTTTCTGTGCTCAACAG+AGG 0.641901 7_2:-83663671 Msa1083380:five_prime_UTR
GGTACTACATCATCTCCAGT+AGG 0.642872 7_2:-83661358 Msa1083380:CDS
ACTAGGATTAGTGCTAGTAA+TGG 0.644779 7_2:+83662383 None:intergenic
GATTGTTCACAAATAAACCA+AGG 0.679441 7_2:-83662516 Msa1083380:CDS
ATGTTGGTCTATGAGGGACT+GGG 0.680149 7_2:+83663627 None:intergenic
CCTCCTGAAGAAGAAGATGG+AGG 0.682773 7_2:+83662621 None:intergenic
CCACCATCACCATTATCAGG+AGG 0.700034 7_2:-83662690 Msa1083380:CDS
TGTTCACAAATAAACCAAGG+TGG 0.741309 7_2:-83662513 Msa1083380:CDS
GCTGTTTGAAGTGTAGATTG+TGG 0.741949 7_2:+83662570 None:intergenic
ACACCACCAACAGTTCCAGG+AGG 0.766003 7_2:-83662738 Msa1083380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGTGTTTTAGAAATTTTA+AGG - chr7_2:83662876-83662895 Msa1083380:CDS 15.0%
!!! TTTGATTTGATTTTATCTTT+TGG + chr7_2:83663075-83663094 None:intergenic 15.0%
!!! TTTTCAACTTATTTTCATAA+GGG + chr7_2:83663337-83663356 None:intergenic 15.0%
!! TACAAAGAAAGAAACAATAA+AGG - chr7_2:83661416-83661435 Msa1083380:intron 20.0%
!! AATATGTTTCTTTGATACTA+AGG + chr7_2:83661503-83661522 None:intergenic 20.0%
!!! CATGACAGAAATTTTTTTAA+AGG + chr7_2:83661622-83661641 None:intergenic 20.0%
!! TGTAAAAATAGCATTAAACA+AGG + chr7_2:83661852-83661871 None:intergenic 20.0%
!! AAACTATTATAGATCTTACT+AGG + chr7_2:83662554-83662573 None:intergenic 20.0%
!! CAAGCATAATATGAAAAATT+AGG + chr7_2:83662582-83662601 None:intergenic 20.0%
!! TTACTCAATTCAAATATCTA+CGG - chr7_2:83662820-83662839 Msa1083380:CDS 20.0%
!!! TTACAAAAAAGACATTGATT+AGG + chr7_2:83662902-83662921 None:intergenic 20.0%
!! TAAGCTATAAGCTTAAAAAT+GGG + chr7_2:83663160-83663179 None:intergenic 20.0%
!! ATAAGCTATAAGCTTAAAAA+TGG + chr7_2:83663161-83663180 None:intergenic 20.0%
!!! ATATCTAAAACTAGCTTATA+GGG + chr7_2:83663273-83663292 None:intergenic 20.0%
!!! AATATCTAAAACTAGCTTAT+AGG + chr7_2:83663274-83663293 None:intergenic 20.0%
!!! GTTTTCAACTTATTTTCATA+AGG + chr7_2:83663338-83663357 None:intergenic 20.0%
!!! AATAAGTTGAAAACAACTTA+TGG - chr7_2:83663344-83663363 Msa1083380:five_prime_UTR 20.0%
!! ATTTTTCTTCTTTGTGCAAA+TGG - chr7_2:83661446-83661465 Msa1083380:intron 25.0%
!! TGATACTAAGGAAATGTTTT+TGG + chr7_2:83661491-83661510 None:intergenic 25.0%
!! AAACACTATTTCTTTCATCA+TGG - chr7_2:83661726-83661745 Msa1083380:intron 25.0%
! AGAAGAAAATGAGAAAAGAT+AGG + chr7_2:83661780-83661799 None:intergenic 25.0%
! AGAAATAGTTGAAAATGCAT+TGG + chr7_2:83661910-83661929 None:intergenic 25.0%
!! AATGCATTTTCAACTATTTC+TGG - chr7_2:83661909-83661928 Msa1083380:intron 25.0%
!!! AGTATCTTATTGGCTTAAAA+AGG + chr7_2:83662801-83662820 None:intergenic 25.0%
! GAATTGAGTAAGTATCTTAT+TGG + chr7_2:83662811-83662830 None:intergenic 25.0%
!!! AAGTTGTTTTCACTTTTCAT+AGG - chr7_2:83663119-83663138 Msa1083380:intron 25.0%
!!! AGTTGTTTTCACTTTTCATA+GGG - chr7_2:83663120-83663139 Msa1083380:intron 25.0%
!! TATCTAAAACTAGCTTATAG+GGG + chr7_2:83663272-83663291 None:intergenic 25.0%
! ACTAAGCTTAATACATCAAT+AGG - chr7_2:83663481-83663500 Msa1083380:five_prime_UTR 25.0%
AGATAACGCACTTTGTATAA+AGG - chr7_2:83661369-83661388 Msa1083380:intron 30.0%
! GAACTAAAGGTATAAAGGTT+AGG + chr7_2:83661590-83661609 None:intergenic 30.0%
! ACCTTTATACCTTTAGTTCA+AGG - chr7_2:83661591-83661610 Msa1083380:intron 30.0%
! TCCTTGAACTAAAGGTATAA+AGG + chr7_2:83661595-83661614 None:intergenic 30.0%
! TATACCTTTAGTTCAAGGAT+AGG - chr7_2:83661596-83661615 Msa1083380:intron 30.0%
!! AGTGTTTCTGGAATTTAGAA+TGG + chr7_2:83661713-83661732 None:intergenic 30.0%
GATGAAAGAAATAGTGTTTC+TGG + chr7_2:83661725-83661744 None:intergenic 30.0%
! TTTCTCATTTTCTTCTGTTC+TGG - chr7_2:83661784-83661803 Msa1083380:intron 30.0%
!! GCTACTTTCAAATTCTTTTC+AGG - chr7_2:83661882-83661901 Msa1083380:intron 30.0%
TTGTAACAGATCACAAGATT+TGG - chr7_2:83661982-83662001 Msa1083380:intron 30.0%
GATTGTTCACAAATAAACCA+AGG - chr7_2:83662401-83662420 Msa1083380:CDS 30.0%
!!! CTCTTTTTTGAATTGTGACT+AGG - chr7_2:83662630-83662649 Msa1083380:CDS 30.0%
!! GGAATGAGAACTTTGAAATA+TGG - chr7_2:83662939-83662958 Msa1083380:CDS 30.0%
AGCATAATTTAGACCTTGTT+TGG - chr7_2:83662976-83662995 Msa1083380:CDS 30.0%
TTAAGCTGTATATCCAAACA+AGG + chr7_2:83662992-83663011 None:intergenic 30.0%
TTGACTAAAAAAGACCAGTT+TGG - chr7_2:83663196-83663215 Msa1083380:five_prime_UTR 30.0%
!!! TTCTGAAACTGTTTTAGACA+TGG + chr7_2:83663370-83663389 None:intergenic 30.0%
GCTTAATACATCAATAGGTA+TGG - chr7_2:83663486-83663505 Msa1083380:five_prime_UTR 30.0%
GCATTGAATTGAACAGATGT+TGG + chr7_2:83661309-83661328 None:intergenic 35.0%
AACGCACTTTGTATAAAGGA+AGG - chr7_2:83661373-83661392 Msa1083380:intron 35.0%
!!! TTGAGATCTTGCTTTTTGGA+AGG + chr7_2:83661944-83661963 None:intergenic 35.0%
!!! GACTTTGAGATCTTGCTTTT+TGG + chr7_2:83661948-83661967 None:intergenic 35.0%
ATCTACACTTCAAACAGCAT+TGG - chr7_2:83662352-83662371 Msa1083380:intron 35.0%
TGTTCACAAATAAACCAAGG+TGG - chr7_2:83662404-83662423 Msa1083380:CDS 35.0%
!!! GCATGGTTTTGAAGTGAATT+TGG + chr7_2:83662443-83662462 None:intergenic 35.0%
TGTTGAATGCAAAAGAAGCA+TGG + chr7_2:83662460-83662479 None:intergenic 35.0%
! ACTAGGATTAGTGCTAGTAA+TGG + chr7_2:83662537-83662556 None:intergenic 35.0%
TTTGAATTGTGACTAGGTTC+TGG - chr7_2:83662636-83662655 Msa1083380:CDS 35.0%
TAATGAAAGCTTTCCCTTCA+CGG + chr7_2:83662760-83662779 None:intergenic 35.0%
CAAAGTTCTCATTCCATCTA+AGG + chr7_2:83662934-83662953 None:intergenic 35.0%
TATAGGGGATGAACATTTAG+TGG + chr7_2:83663257-83663276 None:intergenic 35.0%
ACATCAATAGGTATGGAACA+AGG - chr7_2:83663493-83663512 Msa1083380:five_prime_UTR 35.0%
CATCAATAGGTATGGAACAA+GGG - chr7_2:83663494-83663513 Msa1083380:five_prime_UTR 35.0%
CTCAACAGAGGAAAAAAGCA+GGG - chr7_2:83661258-83661277 Msa1083380:CDS 40.0%
! GAACAGATGTTGGTCTATGA+GGG + chr7_2:83661299-83661318 None:intergenic 40.0%
! TGAACAGATGTTGGTCTATG+AGG + chr7_2:83661300-83661319 None:intergenic 40.0%
!! AGGAAGGAGTATTGAAGCTT+TGG - chr7_2:83661389-83661408 Msa1083380:intron 40.0%
AAGGCCTATCCTTGAACTAA+AGG + chr7_2:83661603-83661622 None:intergenic 40.0%
! GGAATTTAGAATGGAGCTGT+TGG + chr7_2:83661704-83661723 None:intergenic 40.0%
GATGCAAGTAGAAGCTTCAT+TGG + chr7_2:83661752-83661771 None:intergenic 40.0%
!! CAGTGATGATTGTTGGTGAT+GGG + chr7_2:83662028-83662047 None:intergenic 40.0%
! ACAGTGATGATTGTTGGTGA+TGG + chr7_2:83662029-83662048 None:intergenic 40.0%
GAAGGAACAGTGATGATTGT+TGG + chr7_2:83662035-83662054 None:intergenic 40.0%
AGAAACTGTTGTGACAGGAT+TGG + chr7_2:83662060-83662079 None:intergenic 40.0%
ACAGTTTCTCCAACAAATCC+AGG - chr7_2:83662071-83662090 Msa1083380:intron 40.0%
!! GCTGGATTTGTTGGTGATAA+TGG + chr7_2:83662140-83662159 None:intergenic 40.0%
!! GGTGAATTTGCTGGATTTGT+TGG + chr7_2:83662149-83662168 None:intergenic 40.0%
! GCTGTTTGAAGTGTAGATTG+TGG + chr7_2:83662350-83662369 None:intergenic 40.0%
GACTATGCTTGTGGAACAAA+AGG - chr7_2:83662374-83662393 Msa1083380:intron 40.0%
GTAACCAAACCTACCTTAGA+TGG - chr7_2:83662918-83662937 Msa1083380:CDS 40.0%
! CATTCCATCTAAGGTAGGTT+TGG + chr7_2:83662925-83662944 None:intergenic 40.0%
! GTTCTCATTCCATCTAAGGT+AGG + chr7_2:83662930-83662949 None:intergenic 40.0%
! CACTTTTCATAGGGTCTGTA+TGG - chr7_2:83663129-83663148 Msa1083380:intron 40.0%
CACATTAAGCGAGTCTGTTT+GGG + chr7_2:83663429-83663448 None:intergenic 40.0%
ACACATTAAGCGAGTCTGTT+TGG + chr7_2:83663430-83663449 None:intergenic 40.0%
!! GAACAAGGGAGTACTAATCA+TGG - chr7_2:83663508-83663527 Msa1083380:five_prime_UTR 40.0%
! ACATCATCTCCAGTAGGTTT+TGG - chr7_2:83663565-83663584 Msa1083380:five_prime_UTR 40.0%
! CATCATCTCCAGTAGGTTTT+GGG - chr7_2:83663566-83663585 Msa1083380:five_prime_UTR 40.0%
GTTGAATGAGAGGAATCCAA+TGG + chr7_2:83663604-83663623 None:intergenic 40.0%
TTGGATTCCTCTCATTCAAC+TGG - chr7_2:83663604-83663623 Msa1083380:five_prime_UTR 40.0%
!! CATGGTTCTGGTGACATTAT+TGG - chr7_2:83663648-83663667 Msa1083380:five_prime_UTR 40.0%
TTATTGGTCAGTGGAAGACT+CGG - chr7_2:83663664-83663683 Msa1083380:five_prime_UTR 40.0%
GCTCAACAGAGGAAAAAAGC+AGG - chr7_2:83661257-83661276 Msa1083380:CDS 45.0%
! ATGTTGGTCTATGAGGGACT+GGG + chr7_2:83661293-83661312 None:intergenic 45.0%
!! GTTGTGACAGGATTGGTTGA+AGG + chr7_2:83662053-83662072 None:intergenic 45.0%
GTTGGAGAAACTGTTGTGAC+AGG + chr7_2:83662065-83662084 None:intergenic 45.0%
GTAGTAGAAGGAACTGTGAC+AGG + chr7_2:83662104-83662123 None:intergenic 45.0%
!! GTTGGTGATAATGGAACAGC+TGG + chr7_2:83662131-83662150 None:intergenic 45.0%
!! ACAGGTACTGGTGAATTTGC+TGG + chr7_2:83662158-83662177 None:intergenic 45.0%
!! GGTGGTGGATAAGAATTCAC+TGG + chr7_2:83662212-83662231 None:intergenic 45.0%
!! GTTCCTCCTGATAATGGTGA+TGG + chr7_2:83662233-83662252 None:intergenic 45.0%
TCACCATTATCAGGAGGAAC+AGG - chr7_2:83662233-83662252 Msa1083380:CDS 45.0%
GTTCCTGTTCCTCCTGATAA+TGG + chr7_2:83662239-83662258 None:intergenic 45.0%
AGTCCTCCATCTTCTTCTTC+AGG - chr7_2:83662293-83662312 Msa1083380:intron 45.0%
CTACCTCCTGAAGAAGAAGA+TGG + chr7_2:83662302-83662321 None:intergenic 45.0%
AGTGTAGATTGTGGTGTTCC+AGG + chr7_2:83662341-83662360 None:intergenic 45.0%
! ACAGCATTGGACTATGCTTG+TGG - chr7_2:83662365-83662384 Msa1083380:intron 45.0%
GATTGTAACAGCTACCACCT+TGG + chr7_2:83662421-83662440 None:intergenic 45.0%
CAACAAGCTGTGACTTTGGA+GGG - chr7_2:83662504-83662523 Msa1083380:CDS 45.0%
! AACAAGCTGTGACTTTGGAG+GGG - chr7_2:83662505-83662524 Msa1083380:CDS 45.0%
GAAGGTGACGTTTACCAAAC+TGG + chr7_2:83663213-83663232 None:intergenic 45.0%
! AGATAGCTTGTGGCTCTGTT+TGG + chr7_2:83663309-83663328 None:intergenic 45.0%
AACAGAGCCACAAGCTATCT+TGG - chr7_2:83663309-83663328 Msa1083380:five_prime_UTR 45.0%
! TAAGCGAGTCTGTTTGGGAT+TGG + chr7_2:83663424-83663443 None:intergenic 45.0%
! ATTCCCATCTTTTGCAGCTC+TGG - chr7_2:83663538-83663557 Msa1083380:five_prime_UTR 45.0%
GTACCAGAGCTGCAAAAGAT+GGG + chr7_2:83663544-83663563 None:intergenic 45.0%
AGTACCAGAGCTGCAAAAGA+TGG + chr7_2:83663545-83663564 None:intergenic 45.0%
GGTACTACATCATCTCCAGT+AGG - chr7_2:83663559-83663578 Msa1083380:five_prime_UTR 45.0%
GAATCCAATGGAGAGCTTTG+CGG + chr7_2:83663592-83663611 None:intergenic 45.0%
TCTCAGACCAGTTGAATGAG+AGG + chr7_2:83663614-83663633 None:intergenic 45.0%
AGAACCATGCAGCTTAGCAA+AGG + chr7_2:83663637-83663656 None:intergenic 45.0%
TTTGCTAAGCTGCATGGTTC+TGG - chr7_2:83663636-83663655 Msa1083380:five_prime_UTR 45.0%
CTGGTGACATTATTGGTCAG+TGG - chr7_2:83663655-83663674 Msa1083380:five_prime_UTR 45.0%
GTGGTTTCTGTGCTCAACAG+AGG - chr7_2:83661246-83661265 Msa1083380:CDS 50.0%
! GATGTTGGTCTATGAGGGAC+TGG + chr7_2:83661294-83661313 None:intergenic 50.0%
! GGTGTTGCACCTGGATTTGT+TGG + chr7_2:83662083-83662102 None:intergenic 50.0%
ACAGCTGGTGGAGTAGTAGA+AGG + chr7_2:83662116-83662135 None:intergenic 50.0%
!! GGTGATAATGGAACAGCTGG+TGG + chr7_2:83662128-83662147 None:intergenic 50.0%
!! GTTGGTGGTGTAACAGGTAC+TGG + chr7_2:83662170-83662189 None:intergenic 50.0%
!! GGAACTGTTGGTGGTGTAAC+AGG + chr7_2:83662176-83662195 None:intergenic 50.0%
GTTACACCACCAACAGTTCC+AGG - chr7_2:83662176-83662195 Msa1083380:intron 50.0%
GTTGTTCCTCCTGGAACTGT+TGG + chr7_2:83662188-83662207 None:intergenic 50.0%
!! TTCACTGGTGTTGTTCCTCC+TGG + chr7_2:83662197-83662216 None:intergenic 50.0%
!! CCTGATAATGGTGATGGTGG+TGG + chr7_2:83662227-83662246 None:intergenic 50.0%
CCACCACCATCACCATTATC+AGG - chr7_2:83662224-83662243 Msa1083380:CDS 50.0%
!! CCTCCTGATAATGGTGATGG+TGG + chr7_2:83662230-83662249 None:intergenic 50.0%
CCACCATCACCATTATCAGG+AGG - chr7_2:83662227-83662246 Msa1083380:CDS 50.0%
GAAGGTGGAGGATTTGTGAC+AGG + chr7_2:83662266-83662285 None:intergenic 50.0%
GATGGAGGACTTGTGCTTGA+AGG + chr7_2:83662284-83662303 None:intergenic 50.0%
CCTCCTGAAGAAGAAGATGG+AGG + chr7_2:83662299-83662318 None:intergenic 50.0%
CCTCCATCTTCTTCTTCAGG+AGG - chr7_2:83662296-83662315 Msa1083380:intron 50.0%
CTTCTTCTTCAGGAGGTAGC+TGG - chr7_2:83662303-83662322 Msa1083380:intron 50.0%
!! AAGTCACAGCTTGTTGCAGC+AGG + chr7_2:83662500-83662519 None:intergenic 50.0%
GCTGCAACAAGCTGTGACTT+TGG - chr7_2:83662500-83662519 Msa1083380:CDS 50.0%
GCAACAAGCTGTGACTTTGG+AGG - chr7_2:83662503-83662522 Msa1083380:CDS 50.0%
TGAAGCTGATGGGAAGATGC+AGG + chr7_2:83662664-83662683 None:intergenic 50.0%
TGCATCTTCCCATCAGCTTC+AGG - chr7_2:83662663-83662682 Msa1083380:CDS 50.0%
ATCTTCCCATCAGCTTCAGG+AGG - chr7_2:83662666-83662685 Msa1083380:CDS 50.0%
GGGTAAGTGAGAACCGTGAA+GGG - chr7_2:83662744-83662763 Msa1083380:CDS 50.0%
GCTGATAAGCTCGTGTGAGA+AGG + chr7_2:83663231-83663250 None:intergenic 50.0%
AAGGGCTCCAAGATAGCTTG+TGG + chr7_2:83663319-83663338 None:intergenic 50.0%
GAGACCTTTGCTAAGCTGCA+TGG - chr7_2:83663630-83663649 Msa1083380:five_prime_UTR 50.0%
! ACTGTGACAGGTGTTGCACC+TGG + chr7_2:83662092-83662111 None:intergenic 55.0%
ACACCACCAACAGTTCCAGG+AGG - chr7_2:83662179-83662198 Msa1083380:intron 55.0%
GTTCCTCCTGGAACTGTTGG+TGG + chr7_2:83662185-83662204 None:intergenic 55.0%
GGACTTGTGCTTGAAGGTGG+AGG + chr7_2:83662278-83662297 None:intergenic 55.0%
GGAGGACTTGTGCTTGAAGG+TGG + chr7_2:83662281-83662300 None:intergenic 55.0%
TTCAGGAGGTAGCTGGTGTG+TGG - chr7_2:83662310-83662329 Msa1083380:intron 55.0%
AGCTGGTGTGTGGCTAAACC+TGG - chr7_2:83662320-83662339 Msa1083380:intron 55.0%
TTCCCATCAGCTTCAGGAGG+AGG - chr7_2:83662669-83662688 Msa1083380:CDS 55.0%
CTCCTCCTCCTGAAGCTGAT+GGG + chr7_2:83662674-83662693 None:intergenic 55.0%
CGGGTAAGTGAGAACCGTGA+AGG - chr7_2:83662743-83662762 Msa1083380:CDS 55.0%
CTTTGCGGCCCAAAACCTAC+TGG + chr7_2:83663577-83663596 None:intergenic 55.0%
GCTCCTCCTCCTGAAGCTGA+TGG + chr7_2:83662675-83662694 None:intergenic 60.0%
TCAGCTTCAGGAGGAGGAGC+TGG - chr7_2:83662675-83662694 Msa1083380:CDS 60.0%
CACGGTTCTCACTTACCCGC+CGG + chr7_2:83662742-83662761 None:intergenic 60.0%
TGGGCCGCAAAGCTCTCCAT+TGG - chr7_2:83663585-83663604 Msa1083380:five_prime_UTR 60.0%
ACAGGCACAGGCACAGGCAC+AGG - chr7_2:83662705-83662724 Msa1083380:CDS 65.0%
ACAGGCACAGGCACAGGCAC+AGG - chr7_2:83662705-83662724 Msa1083380:CDS 65.0%
GGCACAGGCACAGGCACATC+CGG - chr7_2:83662720-83662739 Msa1083380:CDS 65.0%
ACAGGCACAGGCACATCCGG+CGG - chr7_2:83662723-83662742 Msa1083380:CDS 65.0%
TCAGGAGGAGGAGCTGGCGC+AGG - chr7_2:83662681-83662700 Msa1083380:CDS 70.0%
GCAGGCACAGGCACAGGCAC+AGG - chr7_2:83662699-83662718 Msa1083380:CDS 70.0%
CAGGCACAGGCACATCCGGC+GGG - chr7_2:83662724-83662743 Msa1083380:CDS 70.0%
GGAGGAGCTGGCGCAGGCAC+AGG - chr7_2:83662687-83662706 Msa1083380:CDS 75.0%
GCTGGCGCAGGCACAGGCAC+AGG - chr7_2:83662693-83662712 Msa1083380:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 83661240 83663699 83661240 ID=Msa1083380;Name=Msa1083380
chr7_2 mRNA 83661240 83663699 83661240 ID=Msa1083380-mRNA-1;Parent=Msa1083380;Name=Msa1083380-mRNA-1;_AED=0.02;_eAED=0.02;_QI=505|0.66|0.5|1|1|1|4|0|316
chr7_2 exon 83661240 83661384 83661240 ID=Msa1083380-mRNA-1:exon:22016;Parent=Msa1083380-mRNA-1
chr7_2 exon 83662194 83662287 83662194 ID=Msa1083380-mRNA-1:exon:22015;Parent=Msa1083380-mRNA-1
chr7_2 exon 83662385 83663035 83662385 ID=Msa1083380-mRNA-1:exon:22014;Parent=Msa1083380-mRNA-1
chr7_2 exon 83663134 83663699 83663134 ID=Msa1083380-mRNA-1:exon:22013;Parent=Msa1083380-mRNA-1
chr7_2 five_prime_UTR 83663195 83663699 83663195 ID=Msa1083380-mRNA-1:five_prime_utr;Parent=Msa1083380-mRNA-1
chr7_2 CDS 83663134 83663194 83663134 ID=Msa1083380-mRNA-1:cds;Parent=Msa1083380-mRNA-1
chr7_2 CDS 83662385 83663035 83662385 ID=Msa1083380-mRNA-1:cds;Parent=Msa1083380-mRNA-1
chr7_2 CDS 83662194 83662287 83662194 ID=Msa1083380-mRNA-1:cds;Parent=Msa1083380-mRNA-1
chr7_2 CDS 83661240 83661384 83661240 ID=Msa1083380-mRNA-1:cds;Parent=Msa1083380-mRNA-1
Gene Sequence

>Msa1083380

ATGGCCAATGAAGCTTCTACTTGCATCTTGTTCCTATCTTTTCTCATTTTCTTCTGTTCTGGAACCAATGCATTTTCAACTATTTCTGGAGCAAGATTCCTTCCAAAAAGCAAGATCTCAAAGTCTCAGATTCAGTTTCTTGTAACAGATCACAAGATTTGGAGAAAACTTCTAGACACAAACCCATCACCAACAATCATCACTGTTCCTTCAACCAATCCTGTCACAACAGTTTCTCCAACAAATCCAGGTGCAACACCTGTCACAGTTCCTTCTACTACTCCACCAGCTGTTCCATTATCACCAACAAATCCAGCAAATTCACCAGTACCTGTTACACCACCAACAGTTCCAGGAGGAACAACACCAGTGAATTCTTATCCACCACCATCACCATTATCAGGAGGAACAGGAACTGTTCCTGTCACAAATCCTCCACCTTCAAGCACAAGTCCTCCATCTTCTTCTTCAGGAGGTAGCTGGTGTGTGGCTAAACCTGGAACACCACAATCTACACTTCAAACAGCATTGGACTATGCTTGTGGAACAAAAGGAACTGATTGTTCACAAATAAACCAAGGTGGTAGCTGTTACAATCCAAATTCACTTCAAAACCATGCTTCTTTTGCATTCAACAGCTACTATGTAAAGAATCCTGCTGCAACAAGCTGTGACTTTGGAGGGGTTGCTACCATTACTAGCACTAATCCTAGTTCTGGTACCTGCATCTTCCCATCAGCTTCAGGAGGAGGAGCTGGCGCAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACATCCGGCGGCTCTGGTACTACATCATCTCCAGTAGGTTTTGGGCCGCAAAGCTCTCCATTGGATTCCTCTCATTCAACTGGTCTGAGACCTTTGCTAAGCTGCATGGTTCTGGTGACATTATTGGTCAGTGGAAGACTCGGCATGAGCCCATAG
Protein sequence

>Msa1083380

MANEASTCILFLSFLIFFCSGTNAFSTISGARFLPKSKISKSQIQFLVTDHKIWRKLLDTNPSPTIITVPSTNPVTTVSPTNPGATPVTVPSTTPPAVPLSPTNPANSPVPVTPPTVPGGTTPVNSYPPPSPLSGGTGTVPVTNPPPSSTSPPSSSSGGSWCVAKPGTPQSTLQTALDYACGTKGTDCSQINQGGSCYNPNSLQNHASFAFNSYYVKNPAATSCDFGGVATITSTNPSSGTCIFPSASGGGAGAGTGTGTGTGTGTSGGSGTTSSPVGFGPQSSPLDSSHSTGLRPLLSCMVLVTLLVSGRLGMSP*