AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0205250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0205250 MtrunA17_Chr2g0303521 95.918 637 24 1 1 637 1 635 0.0 1170
Msa0205250 MtrunA17_Chr7g0250681 32.273 440 281 7 208 635 405 839 3.38e-56 204
Msa0205250 MtrunA17_Chr8g0335341 31.320 447 284 7 208 635 277 719 3.90e-51 188
Msa0205250 MtrunA17_Chr3g0139411 29.336 467 297 10 188 633 248 702 5.15e-46 174
Msa0205250 MtrunA17_Chr2g0331821 27.650 434 293 7 201 621 313 738 1.63e-37 149
Msa0205250 MtrunA17_Chr1g0211271 26.726 449 293 10 207 626 273 714 1.86e-33 136
Msa0205250 MtrunA17_Chr4g0004471 28.571 343 230 6 213 550 128 460 1.95e-31 129
Msa0205250 MtrunA17_Chr3g0124841 25.966 466 293 11 208 636 454 904 1.60e-27 118
Msa0205250 MtrunA17_Chr4g0072011 24.501 351 235 8 196 525 323 664 5.78e-25 110
Msa0205250 MtrunA17_Chr5g0448571 30.855 269 169 4 297 552 438 702 1.85e-24 108
Msa0205250 MtrunA17_Chr5g0440551 30.417 240 151 4 293 520 428 663 6.66e-24 107
Msa0205250 MtrunA17_Chr3g0118401 30.833 240 150 4 293 520 444 679 6.72e-24 107
Msa0205250 MtrunA17_Chr2g0298171 27.222 360 214 11 201 524 525 872 4.90e-22 101
Msa0205250 MtrunA17_Chr3g0143731 23.362 351 233 7 296 637 362 685 1.95e-19 92.8
Msa0205250 MtrunA17_Chr8g0382541 30.909 165 96 5 376 529 3 160 4.50e-14 72.4
Msa0205250 MtrunA17_Chr3g0130761 28.017 232 155 4 298 523 436 661 4.52e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0205250 AT2G34670.2 42.216 713 299 17 1 635 1 678 3.32e-148 445
Msa0205250 AT2G34670.1 42.609 575 220 16 1 500 1 540 8.08e-113 350
Msa0205250 AT3G51290.3 34.459 444 275 5 199 635 191 625 1.28e-72 246
Msa0205250 AT3G51290.2 34.459 444 275 5 199 635 191 625 1.03e-71 247
Msa0205250 AT3G51290.1 33.559 444 273 6 199 635 191 619 3.79e-67 231
Msa0205250 AT1G02110.1 32.041 490 310 8 158 635 221 699 6.96e-60 213
Msa0205250 AT3G60320.1 28.571 441 299 4 208 635 355 792 4.53e-48 181
Msa0205250 AT1G52320.3 27.617 449 293 10 199 631 18 450 3.93e-40 153
Msa0205250 AT1G52320.4 27.617 449 293 10 199 631 18 450 3.93e-40 153
Msa0205250 AT1G52320.1 27.069 447 298 8 199 631 321 753 1.97e-39 155
Msa0205250 AT1G52320.2 27.069 447 298 8 199 631 344 776 2.20e-39 155
Msa0205250 AT1G52320.5 27.069 447 298 8 199 631 344 776 2.20e-39 155
Msa0205250 AT5G25590.1 27.119 472 314 9 176 631 301 758 2.12e-37 149
Msa0205250 AT1G77500.1 30.199 351 207 7 208 532 449 787 2.00e-30 128
Msa0205250 AT1G21740.1 26.271 472 285 11 208 637 497 947 1.77e-28 122
Msa0205250 AT4G35240.2 25.000 456 259 11 208 629 419 825 3.30e-27 118
Msa0205250 AT4G35240.1 25.000 456 259 11 208 629 419 825 3.30e-27 118
Msa0205250 AT4G35240.4 25.000 456 259 11 208 629 419 825 3.81e-27 117
Msa0205250 AT4G35240.3 25.000 456 259 11 208 629 419 825 3.81e-27 117
Msa0205250 AT2G27090.2 33.074 257 151 6 293 536 424 672 6.57e-26 113
Msa0205250 AT2G27090.1 33.074 257 151 6 293 536 424 672 6.57e-26 113
Msa0205250 AT4G39790.1 27.897 233 152 3 293 513 371 599 3.31e-20 95.5
Msa0205250 AT4G30130.3 29.032 248 158 4 293 524 397 642 1.38e-17 87.4
Msa0205250 AT4G30130.1 29.032 248 158 4 293 524 397 642 1.38e-17 87.4
Msa0205250 AT2G19090.1 24.932 365 226 8 196 524 373 725 8.75e-17 85.1
Msa0205250 AT1G20530.1 26.111 360 228 11 210 552 233 571 8.80e-17 84.7
Msa0205250 AT5G54480.1 22.932 266 169 7 298 548 401 645 2.11e-11 67.4

Find 188 sgRNAs with CRISPR-Local

Find 451 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTTCCACTTGCTTCTTTA+AGG 0.121977 2_1:+31901527 None:intergenic
TGAAACAACTTCATCCATTT+TGG 0.154541 2_1:-31902506 Msa0205250:CDS
GCGACTGCCGCTCAACTTTC+TGG 0.157379 2_1:-31906789 Msa0205250:five_prime_UTR
AAACATCACTACATAAATTT+TGG 0.162424 2_1:-31906937 Msa0205250:five_prime_UTR
TTATACAAGCTGATGCTTTC+AGG 0.173366 2_1:+31906019 None:intergenic
TCGATCAAATGTTGAGAAAT+TGG 0.186597 2_1:-31902563 Msa0205250:CDS
CTCGGCCTGTTGAGCAATTA+TGG 0.187743 2_1:+31901719 None:intergenic
TAATCAACTCATCTTCAAAA+TGG 0.208562 2_1:-31906700 Msa0205250:exon
AAGTGTGAAAGCAGATTATT+TGG 0.231735 2_1:-31901508 Msa0205250:CDS
CTTCCTCTCAAACTCCAATT+TGG 0.258099 2_1:+31902645 None:intergenic
GTTTGGGAGGATAGGGCTTC+TGG 0.264831 2_1:+31907080 None:intergenic
GGTGGGGAAGGCGGGGCTTC+AGG 0.269177 2_1:+31906471 None:intergenic
CAGTGGGAGCTTGGGCTTGA+TGG 0.280020 2_1:-31902014 Msa0205250:CDS
CGCTTTCAAATAAGCTAATA+AGG 0.286610 2_1:+31906572 None:intergenic
AAGACAGCCTCAGAAATTTA+TGG 0.291498 2_1:+31906820 None:intergenic
TTCATCCTCAAATTCAGTTT+TGG 0.303718 2_1:+31906239 None:intergenic
GACAAATTTACAGTACTCTA+AGG 0.305090 2_1:+31907053 None:intergenic
AGTCGTTTGAGGAGGAGAAT+TGG 0.309003 2_1:-31906269 Msa0205250:CDS
TTGAGAGTGAGGCTTCTTAT+TGG 0.311587 2_1:-31902172 Msa0205250:CDS
GCTAAATACCCTTGCAGAAT+TGG 0.314092 2_1:+31904874 None:intergenic
GTCGTTTGAGGAGGAGAATT+GGG 0.314868 2_1:-31906268 Msa0205250:CDS
TTCATCTATAAGTTCCAAAA+TGG 0.322487 2_1:+31902492 None:intergenic
CAGTACTCTAAGGCTTTGTT+TGG 0.341198 2_1:+31907063 None:intergenic
AATCAGGCGGTGGGGAAGGC+GGG 0.342529 2_1:+31906463 None:intergenic
TTACATCAACTTCTGAATCT+TGG 0.347770 2_1:+31906214 None:intergenic
ACTCTTCTGCGGGAGAATTC+TGG 0.348144 2_1:-31905958 Msa0205250:CDS
ATCAGGCGGTGGGGAAGGCG+GGG 0.356632 2_1:+31906464 None:intergenic
GAATTAGACTTTGCCTCTAC+TGG 0.357502 2_1:-31906498 Msa0205250:CDS
AAATCAGGCGGTGGGGAAGG+CGG 0.369631 2_1:+31906462 None:intergenic
AGAAAACTCAGCGTCATCTT+TGG 0.373370 2_1:+31904811 None:intergenic
AGAGGGTGAGGACATTGATT+TGG 0.376255 2_1:-31902602 Msa0205250:CDS
TTTATGAAATAGCGGATGCC+TGG 0.385105 2_1:+31901566 None:intergenic
TTTGGGTTAGCTCAGTTTGT+AGG 0.386128 2_1:-31907194 Msa0205250:five_prime_UTR
AAGGCTTTGTTTGGGAGGAT+AGG 0.386632 2_1:+31907072 None:intergenic
CGGCAGTTAATGCAACCAAC+TGG 0.389360 2_1:+31902458 None:intergenic
GAAAGCATCAGCTTGTATAA+AGG 0.390053 2_1:-31906016 Msa0205250:CDS
AGCGGTGGAGGTAGCAAATC+AGG 0.390403 2_1:+31906447 None:intergenic
TCAGAAATTTATGGAGCATC+AGG 0.395589 2_1:+31906829 None:intergenic
ATCTGTGAACAGTGGGAGCT+TGG 0.397020 2_1:-31902023 Msa0205250:CDS
AGGCTTTGTTTGGGAGGATA+GGG 0.401242 2_1:+31907073 None:intergenic
ACGTTCCATAATTGCTCAAC+AGG 0.401754 2_1:-31901724 Msa0205250:CDS
GGAAAGAATGGGATGACTTT+GGG 0.402426 2_1:-31907211 Msa0205250:five_prime_UTR
AGGAAAGAATGGGATGACTT+TGG 0.404780 2_1:-31907212 Msa0205250:five_prime_UTR
GGAGGAGGGAATTACCAAAT+TGG 0.413638 2_1:-31902659 Msa0205250:CDS
CACTGAGGTTACTCAGCTGC+TGG 0.417437 2_1:+31902255 None:intergenic
AGAAGTTGTAGAGTCGTTTG+AGG 0.425062 2_1:-31906280 Msa0205250:CDS
CGCTTTCATTGCCATTCCTT+AGG 0.430652 2_1:+31902069 None:intergenic
GAGGAAGGGAAAGGAAAGAA+TGG 0.439059 2_1:-31907223 Msa0205250:five_prime_UTR
TCTGTGAACAGTGGGAGCTT+GGG 0.453467 2_1:-31902022 Msa0205250:CDS
AATCAACTCATCTTCAAAAT+GGG 0.454841 2_1:-31906699 Msa0205250:exon
AGGGTAAGAAGTACCTTATC+TGG 0.459508 2_1:+31901987 None:intergenic
AATCGCAACAAGAGTATGTA+AGG 0.460182 2_1:-31902124 Msa0205250:CDS
GGGAAGGCGGGGCTTCAGGC+AGG 0.460760 2_1:+31906475 None:intergenic
AGCAAATCAGGCGGTGGGGA+AGG 0.466793 2_1:+31906459 None:intergenic
CAATGAGCTCCCGGCCTGCA+TGG 0.466880 2_1:+31904776 None:intergenic
AGAAAAGGAGGCAGCGGTGG+AGG 0.469566 2_1:+31906435 None:intergenic
ATCACGTAGCGGGAAGCAAC+CGG 0.469892 2_1:-31906181 Msa0205250:CDS
AGTGGGAGCTTGGGCTTGAT+GGG 0.470747 2_1:-31902013 Msa0205250:CDS
GTTTGCTAGTTTGAAGAGGA+AGG 0.477111 2_1:-31907238 Msa0205250:five_prime_UTR
TCATCAACTGGTTCTTTGAC+CGG 0.480247 2_1:+31906162 None:intergenic
CCCGGCCTGCATGGTTCACT+AGG 0.481968 2_1:+31904785 None:intergenic
AGGAAGGGAAAGGAAAGAAT+GGG 0.482135 2_1:-31907222 Msa0205250:five_prime_UTR
GGGTATTTAGCGTACTATCA+TGG 0.482670 2_1:-31904862 Msa0205250:CDS
TTTCACTGATGCACCGCCGC+AGG 0.485850 2_1:+31902524 None:intergenic
TTTGAAGATGAGGGTGATGA+AGG 0.485921 2_1:-31901600 Msa0205250:CDS
GCAGAGGAACTATCATCAAC+TGG 0.489604 2_1:+31906150 None:intergenic
GAAACTTTACAAGGCAGTAA+AGG 0.489711 2_1:-31904720 Msa0205250:intron
CAGTTGGTTGCATTAACTGC+CGG 0.490052 2_1:-31902457 Msa0205250:CDS
AGTACTCTAAGGCTTTGTTT+GGG 0.492717 2_1:+31907064 None:intergenic
CAGCATATGAACAAAGTTGT+CGG 0.493476 2_1:+31906356 None:intergenic
TGTCAAATTGTGTGAACATA+AGG 0.494043 2_1:+31907422 None:intergenic
AGTTGTAGAGTCGTTTGAGG+AGG 0.494301 2_1:-31906277 Msa0205250:CDS
ACATCTCTTCGTGTCACTGA+TGG 0.494531 2_1:-31901430 Msa0205250:CDS
TTATGAAATAGCGGATGCCT+GGG 0.495642 2_1:+31901567 None:intergenic
CCTAGTGAACCATGCAGGCC+GGG 0.499393 2_1:-31904785 Msa0205250:CDS
GAGGTAGCAAATCAGGCGGT+GGG 0.502476 2_1:+31906454 None:intergenic
TCCTAGTGAACCATGCAGGC+CGG 0.503939 2_1:-31904786 Msa0205250:CDS
TGCTTCCTCTCAAGCAATTG+AGG 0.505979 2_1:-31901397 Msa0205250:CDS
AAAGCTATGCCTGTGGTGAT+TGG 0.506015 2_1:-31906093 Msa0205250:CDS
GCTTGATGGGTTACCAGATA+AGG 0.507842 2_1:-31902000 Msa0205250:intron
AATAGCCTCAATTGCTTGAG+AGG 0.509454 2_1:+31901392 None:intergenic
AGAAACCAAAACTGAATTTG+AGG 0.510649 2_1:-31906244 Msa0205250:CDS
TTCAGAAGTTGATGTAAGTG+TGG 0.515027 2_1:-31906208 Msa0205250:CDS
GCGGAGGTGCTCGAAGTCCC+TGG 0.515708 2_1:-31901652 Msa0205250:CDS
AAAGTCTAATTCTAATGTAT+CGG 0.518544 2_1:+31906509 None:intergenic
TACAATTCAGTTTGAGAGTG+AGG 0.520111 2_1:-31902183 Msa0205250:CDS
TTGAGCAATTATGGAACGTA+TGG 0.520980 2_1:+31901728 None:intergenic
ATTGATGAGGATGGAAGGGT+TGG 0.521693 2_1:-31906660 Msa0205250:CDS
TGAACTAAACTTTGAAGATG+AGG 0.521842 2_1:-31901610 Msa0205250:CDS
ATTGCCATTCCTTAGGCAGT+TGG 0.523231 2_1:+31902076 None:intergenic
AAGTGAAAACAAAATTGAAA+AGG 0.524867 2_1:+31907279 None:intergenic
TTTGCTAGTTTGAAGAGGAA+GGG 0.525970 2_1:-31907237 Msa0205250:five_prime_UTR
GTCGTTGCTATTTCAACCTG+TGG 0.526583 2_1:-31906310 Msa0205250:CDS
AGTTGGTTGCATTAACTGCC+GGG 0.528298 2_1:-31902456 Msa0205250:intron
ATGCAGTTAGTGAGTATCAA+TGG 0.528715 2_1:-31906857 Msa0205250:five_prime_UTR
GGAGGTAGCAAATCAGGCGG+TGG 0.529199 2_1:+31906453 None:intergenic
TTCAGCTTACCAACTGCCTA+AGG 0.530755 2_1:-31902085 Msa0205250:CDS
GCAAGAAAAGGAGGCAGCGG+TGG 0.533171 2_1:+31906432 None:intergenic
CTTTCATTGTGGAGTATCTG+AGG 0.533944 2_1:+31907135 None:intergenic
CAGAATTCAGAATTGTATTG+TGG 0.537342 2_1:+31902228 None:intergenic
GGCAGTTAATGCAACCAACT+GGG 0.539937 2_1:+31902459 None:intergenic
CAGCGGAGATACTCTTCTGC+GGG 0.540118 2_1:-31905968 Msa0205250:CDS
CAAGTATTGATGAGGATGGA+AGG 0.542254 2_1:-31906665 Msa0205250:CDS
ACAACTTCTACTTTATCCAC+AGG 0.542390 2_1:+31906294 None:intergenic
GGCTTCAGGCAGGCCAGTAG+AGG 0.542481 2_1:+31906485 None:intergenic
ATGTAAGGACCCTCAGTAAG+TGG 0.544051 2_1:-31902109 Msa0205250:CDS
ACTCTAAGGCTTTGTTTGGG+AGG 0.549780 2_1:+31907067 None:intergenic
GTGTGGGAAGATCACGTAGC+GGG 0.550776 2_1:-31906191 Msa0205250:CDS
ACAGTTAGTTTGTAATAGAG+AGG 0.552074 2_1:-31906607 Msa0205250:CDS
CAAATAAGCTAATAAGGCAT+CGG 0.555514 2_1:+31906578 None:intergenic
GCATGGATGCCATCAGTCGC+AGG 0.557421 2_1:-31902288 Msa0205250:CDS
GCAACGACGAGCTCAAACCT+TGG 0.559415 2_1:+31906325 None:intergenic
CATAATTGCTCAACAGGCCG+AGG 0.562768 2_1:-31901718 Msa0205250:CDS
CTAGTCCTAGTGAACCATGC+AGG 0.563303 2_1:-31904790 Msa0205250:CDS
AAGTATTGATGAGGATGGAA+GGG 0.564904 2_1:-31906664 Msa0205250:CDS
CTTTGTTTGCTAGTTTGAAG+AGG 0.566127 2_1:-31907242 Msa0205250:five_prime_UTR
TCAGAAGTTGATGTAAGTGT+GGG 0.566134 2_1:-31906207 Msa0205250:CDS
AGCGTCATCTTTGGTGAACG+TGG 0.567269 2_1:+31904820 None:intergenic
GATGAAATACTAGAGAATGA+TGG 0.567408 2_1:-31906381 Msa0205250:CDS
GTATATTGCATATTATATGC+AGG 0.567482 2_1:-31907172 Msa0205250:five_prime_UTR
TAATTCTAATGTATCGGACT+CGG 0.570082 2_1:+31906515 None:intergenic
ATCAGTGACACGAAGAGATG+TGG 0.570760 2_1:+31901432 None:intergenic
GAACTAAACTTTGAAGATGA+GGG 0.571616 2_1:-31901609 Msa0205250:CDS
AGTGTGGCACAATGAGCTCC+CGG 0.577296 2_1:+31904767 None:intergenic
TTACCAAATTGGAGTTTGAG+AGG 0.577960 2_1:-31902648 Msa0205250:CDS
TCAGCAAGAAAAGGAGGCAG+CGG 0.581344 2_1:+31906429 None:intergenic
TCTGAGGTTATCAAGAGTCA+TGG 0.581424 2_1:+31901464 None:intergenic
AGATCAGTGCCTGCGACTGA+TGG 0.582431 2_1:+31902279 None:intergenic
TTAGCGTACTATCATGGAGT+AGG 0.582628 2_1:-31904856 Msa0205250:CDS
TTGAAAGCGTTGAGGAACAC+CGG 0.583723 2_1:-31906558 Msa0205250:CDS
AGAAGCCTTAAAGAAGCAAG+TGG 0.583882 2_1:-31901532 Msa0205250:CDS
TGGTAGAAGCGGGAGAACAT+TGG 0.584904 2_1:-31906073 Msa0205250:CDS
CATATGCAAGGAAAGGAAGA+AGG 0.587629 2_1:-31906637 Msa0205250:CDS
AATGGAGAAATCTTTCATTG+TGG 0.591670 2_1:+31907124 None:intergenic
ACTGAGGTTACTCAGCTGCT+GGG 0.593378 2_1:+31902256 None:intergenic
TAGAAGCGGGAGAACATTGG+AGG 0.594332 2_1:-31906070 Msa0205250:CDS
TAGTTTGAAGAGGAAGGGAA+AGG 0.594898 2_1:-31907232 Msa0205250:five_prime_UTR
CAAGAGAACCAATTCTGCAA+GGG 0.596560 2_1:-31904882 Msa0205250:CDS
CTTACCAACTGCCTAAGGAA+TGG 0.597362 2_1:-31902080 Msa0205250:CDS
GTAGGTTGTCACAAATGTGG+AGG 0.597775 2_1:-31902316 Msa0205250:intron
TCGCACCATCTGTGAACAGT+GGG 0.598576 2_1:-31902030 Msa0205250:CDS
TTATCAAGTATTGATGAGGA+TGG 0.602269 2_1:-31906669 Msa0205250:CDS
TTTGTAGGTTGTCACAAATG+TGG 0.604629 2_1:-31902319 Msa0205250:intron
CATATTATATGCAGGAGCCG+TGG 0.604940 2_1:-31907164 Msa0205250:five_prime_UTR
GAACTGCCTAAGTGTGGCAC+CGG 0.605074 2_1:+31906539 None:intergenic
AAGCTGAATCCACTTACTGA+GGG 0.607524 2_1:+31902100 None:intergenic
AAGCTCCCACTGTTCACAGA+TGG 0.608574 2_1:+31902025 None:intergenic
TAGCTTATTTGAAAGCGTTG+AGG 0.611440 2_1:-31906566 Msa0205250:CDS
CATATGCTGCAAATTGACCA+AGG 0.616254 2_1:-31906342 Msa0205250:CDS
GCAAGAGAACCAATTCTGCA+AGG 0.622419 2_1:-31904883 Msa0205250:CDS
TGGAAGGGTTGGCATATGCA+AGG 0.624183 2_1:-31906649 Msa0205250:CDS
CTGTGGTGATTGGTAGAAGC+GGG 0.625321 2_1:-31906083 Msa0205250:CDS
CTAAGGAATGGCAATGAAAG+CGG 0.626651 2_1:-31902068 Msa0205250:CDS
GATGTGGAAGTCTAGTTCTG+AGG 0.627153 2_1:+31901448 None:intergenic
CCGCTTCTACCAATCACCAC+AGG 0.628033 2_1:+31906084 None:intergenic
CTCGGTGAACTGCCTAAGTG+TGG 0.628590 2_1:+31906533 None:intergenic
AACTAGCAAACAAAGTTCAG+AGG 0.632048 2_1:+31907250 None:intergenic
TCTAAACAAAGTAATAGCAG+AGG 0.632255 2_1:+31906134 None:intergenic
TGATGCTCCATAAATTTCTG+AGG 0.637505 2_1:-31906827 Msa0205250:five_prime_UTR
GGGTTGGCATATGCAAGGAA+AGG 0.637575 2_1:-31906644 Msa0205250:CDS
TGTCATATAATGTAGGAGGA+GGG 0.638178 2_1:-31902673 Msa0205250:intron
TCCGCTATTTCATAAAATAG+CGG 0.639131 2_1:-31901559 Msa0205250:CDS
ATGAAGGTAATATAAGCCCC+AGG 0.640592 2_1:-31901584 Msa0205250:CDS
CTGATTTGATAAGCCTGCGG+CGG 0.640810 2_1:-31902537 Msa0205250:CDS
AACAACTTGTTACCAACACT+AGG 0.641249 2_1:-31906755 Msa0205250:five_prime_UTR
TGGAACGTATGGATAACAGA+AGG 0.642185 2_1:+31901739 None:intergenic
TTGTATTGTGGTTATCACTG+AGG 0.645449 2_1:+31902240 None:intergenic
GTTCTTATTGATATCAGCAG+CGG 0.646022 2_1:-31905985 Msa0205250:CDS
GGCAGAGAAGAAACTTTACA+AGG 0.650354 2_1:-31904729 Msa0205250:CDS
TAAGCTGAATCCACTTACTG+AGG 0.654495 2_1:+31902099 None:intergenic
AGTATCTGAGGTTCGAACCA+CGG 0.654890 2_1:+31907147 None:intergenic
TATGAAATAGCGGATGCCTG+GGG 0.656539 2_1:+31901568 None:intergenic
GCAGTTAATGCAACCAACTG+GGG 0.660306 2_1:+31902460 None:intergenic
AACTTGAAAGAAAGTTGCGG+AGG 0.663528 2_1:-31901668 Msa0205250:CDS
AGGTAGCAAATCAGGCGGTG+GGG 0.663914 2_1:+31906455 None:intergenic
GCAGCGGAGATACTCTTCTG+CGG 0.665974 2_1:-31905969 Msa0205250:CDS
AGAAGCGGGAGAACATTGGA+GGG 0.666824 2_1:-31906069 Msa0205250:CDS
GGAACACCGGTGCCACACTT+AGG 0.668962 2_1:-31906545 Msa0205250:CDS
TGTGTTATCAAGTATTGATG+AGG 0.669531 2_1:-31906673 Msa0205250:CDS
TTCGCACCATCTGTGAACAG+TGG 0.670588 2_1:-31902031 Msa0205250:CDS
CCTGTGGTGATTGGTAGAAG+CGG 0.676030 2_1:-31906084 Msa0205250:CDS
CAAATGTGGAGGATAATGCA+TGG 0.676138 2_1:-31902305 Msa0205250:CDS
AGATGGTGCGAATAGAAGAG+TGG 0.685672 2_1:+31902042 None:intergenic
AGTCTGATTTGATAAGCCTG+CGG 0.688684 2_1:-31902540 Msa0205250:CDS
GAAAAGAGTTCTGTACACGT+TGG 0.699774 2_1:-31906408 Msa0205250:CDS
TGTTACTAAAGCTATGCCTG+TGG 0.715139 2_1:-31906100 Msa0205250:CDS
GGTGGAGGTAGCAAATCAGG+CGG 0.716370 2_1:+31906450 None:intergenic
AGTGTGGGAAGATCACGTAG+CGG 0.767022 2_1:-31906192 Msa0205250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAATATATAGAAAAAAA+TGG + chr2_1:31901699-31901718 None:intergenic 10.0%
!!! TATTTTTAAAATTACAGTTT+TGG - chr2_1:31904475-31904494 Msa0205250:intron 10.0%
!! AAACAAAAAAAAAAATACAA+AGG - chr2_1:31905682-31905701 Msa0205250:intron 10.0%
!! AACAAAAAAAAAAATACAAA+GGG - chr2_1:31905683-31905702 Msa0205250:intron 10.0%
!! AATTGAAAAGGAAAAAAAAA+AGG + chr2_1:31901514-31901533 None:intergenic 15.0%
!!! TGTTTTGAATTTTTTAGTTT+TGG - chr2_1:31904502-31904521 Msa0205250:intron 15.0%
!!! GTTTTGAATTTTTTAGTTTT+GGG - chr2_1:31904503-31904522 Msa0205250:intron 15.0%
!!! TTTTGAATTTTTTAGTTTTG+GGG - chr2_1:31904504-31904523 Msa0205250:intron 15.0%
!! TTATTTACTTACTTTACATT+TGG - chr2_1:31906078-31906097 Msa0205250:CDS 15.0%
!! AAGTGAAAACAAAATTGAAA+AGG + chr2_1:31901526-31901545 None:intergenic 20.0%
!!! TTTTCAATTTTGTTTTCACT+TGG - chr2_1:31901525-31901544 Msa0205250:CDS 20.0%
!!! AAACATCACTACATAAATTT+TGG - chr2_1:31901865-31901884 Msa0205250:intron 20.0%
!! AAAGTCTAATTCTAATGTAT+CGG + chr2_1:31902296-31902315 None:intergenic 20.0%
!!! TTTTAATACTCTTAAAACTG+AGG - chr2_1:31903025-31903044 Msa0205250:intron 20.0%
!!! TTTTGAAATGTTTGAATGTA+TGG - chr2_1:31903062-31903081 Msa0205250:intron 20.0%
!!! TCAATAACTTTTTTTCAGAA+AGG - chr2_1:31903583-31903602 Msa0205250:intron 20.0%
!! ATATGTAGAATAAGTTTGAT+AGG + chr2_1:31903775-31903794 None:intergenic 20.0%
!!! ATCATTTATTTTCTGTGTAT+GGG - chr2_1:31903858-31903877 Msa0205250:intron 20.0%
!! CACACTTAAAAAATTATATG+CGG - chr2_1:31904052-31904071 Msa0205250:intron 20.0%
!!! CTGTTTATTGGTTTTATTAT+TGG + chr2_1:31904112-31904131 None:intergenic 20.0%
!! AAACAAAAACTATTTCAAAC+AGG - chr2_1:31904594-31904613 Msa0205250:intron 20.0%
!!! TGTTAGTTTTTTTTTAGCAA+GGG + chr2_1:31904636-31904655 None:intergenic 20.0%
!!! TTGTTAGTTTTTTTTTAGCA+AGG + chr2_1:31904637-31904656 None:intergenic 20.0%
!!! TTTGAAGTCATTTATTTATC+TGG - chr2_1:31905849-31905868 Msa0205250:intron 20.0%
!!! TCATTTATTTATCTGGTTTT+TGG - chr2_1:31905856-31905875 Msa0205250:intron 20.0%
!! TAGGCTTATTTAAATTCAAT+AGG - chr2_1:31905908-31905927 Msa0205250:intron 20.0%
!!! GGTTATAGTCTTATATATTA+TGG - chr2_1:31905929-31905948 Msa0205250:intron 20.0%
!!! TGGAAAAATGTAAATTCTTT+TGG - chr2_1:31906866-31906885 Msa0205250:five_prime_UTR 20.0%
!!! GGAATGATAATATTTTTTTC+TGG - chr2_1:31906998-31907017 Msa0205250:five_prime_UTR 20.0%
!! TCAACATTTTCAATTTCTCT+TGG - chr2_1:31901453-31901472 Msa0205250:CDS 25.0%
!! ATTTTCAATTTCTCTTGGAT+TGG - chr2_1:31901458-31901477 Msa0205250:CDS 25.0%
! GTATATTGCATATTATATGC+AGG - chr2_1:31901630-31901649 Msa0205250:CDS 25.0%
!! TGTTTCTTTTGTTCTTTTGT+AGG - chr2_1:31901786-31901805 Msa0205250:intron 25.0%
!!! CATAAATTTTGGAGGATTTT+TGG - chr2_1:31901876-31901895 Msa0205250:intron 25.0%
! TAATCAACTCATCTTCAAAA+TGG - chr2_1:31902102-31902121 Msa0205250:CDS 25.0%
! AATCAACTCATCTTCAAAAT+GGG - chr2_1:31902103-31902122 Msa0205250:CDS 25.0%
! AGGAACTTCAATAATCTTAA+AGG + chr2_1:31902900-31902919 None:intergenic 25.0%
! AAGTTCCTTTATGATAGATT+AGG - chr2_1:31902912-31902931 Msa0205250:intron 25.0%
! CAAAACCTAATCTATCATAA+AGG + chr2_1:31902920-31902939 None:intergenic 25.0%
!!! GATAGATTAGGTTTTGTTAT+CGG - chr2_1:31902924-31902943 Msa0205250:intron 25.0%
! TATGGTATATGCATAGATAT+TGG - chr2_1:31903080-31903099 Msa0205250:intron 25.0%
! ATGTGGCAAAAAAAATCTAA+CGG - chr2_1:31903195-31903214 Msa0205250:intron 25.0%
! TGTGGCAAAAAAATATCTAA+CGG + chr2_1:31903340-31903359 None:intergenic 25.0%
! TCAAATAAGAAACATCGTAT+AGG + chr2_1:31903439-31903458 None:intergenic 25.0%
! TTATTTGAATCTTTACCCTA+AGG - chr2_1:31903451-31903470 Msa0205250:intron 25.0%
!!! TTTTCAAGCAAGTATTAATG+TGG + chr2_1:31903546-31903565 None:intergenic 25.0%
!!! GATCATTTATTTTCTGTGTA+TGG - chr2_1:31903857-31903876 Msa0205250:intron 25.0%
!!! CGCATATAATTTTTTAAGTG+TGG + chr2_1:31904054-31904073 None:intergenic 25.0%
! ATATTAGAAAACTGCAAACA+TGG - chr2_1:31904206-31904225 Msa0205250:intron 25.0%
! ATTTAATGCGAAAGATATTC+AGG - chr2_1:31904267-31904286 Msa0205250:intron 25.0%
! TTTAATGCGAAAGATATTCA+GGG - chr2_1:31904268-31904287 Msa0205250:intron 25.0%
! TATTCAGGGAAAAATAAATC+AGG - chr2_1:31904282-31904301 Msa0205250:intron 25.0%
! AAATCAGGAACAAAATTTCA+AGG - chr2_1:31904297-31904316 Msa0205250:intron 25.0%
! TGAAAAATCATCTTTGAATG+TGG + chr2_1:31904960-31904979 None:intergenic 25.0%
!! ACATTCAAAGATGATTTTTC+AGG - chr2_1:31904959-31904978 Msa0205250:intron 25.0%
!!! AGAAACCTTTTTTATGATGT+TGG + chr2_1:31905089-31905108 None:intergenic 25.0%
! ATAAATGACTTCAAAGACAA+AGG + chr2_1:31905844-31905863 None:intergenic 25.0%
! CTAAGAAAGAATAAAAGCAA+AGG + chr2_1:31905891-31905910 None:intergenic 25.0%
!!! CTTTGCTTTTATTCTTTCTT+AGG - chr2_1:31905889-31905908 Msa0205250:intron 25.0%
!!! TGTTTGTTTCTTTTGATCAA+AGG - chr2_1:31906036-31906055 Msa0205250:CDS 25.0%
! GTTCAAATGTCATATAATGT+AGG - chr2_1:31906122-31906141 Msa0205250:CDS 25.0%
! TTCATCTATAAGTTCCAAAA+TGG + chr2_1:31906313-31906332 None:intergenic 25.0%
! TTATATCTGATTCATATCCT+AGG - chr2_1:31906434-31906453 Msa0205250:CDS 25.0%
!!! AGTTTTTTAAAGCAAAACCT+AGG + chr2_1:31906454-31906473 None:intergenic 25.0%
!!! AAAACTGTTGTTTGTTTTGT+AGG - chr2_1:31906468-31906487 Msa0205250:CDS 25.0%
!! TTTGGCAAAACTTTTATGTA+TGG - chr2_1:31906884-31906903 Msa0205250:five_prime_UTR 25.0%
!! TTGGCAAAACTTTTATGTAT+GGG - chr2_1:31906885-31906904 Msa0205250:five_prime_UTR 25.0%
!! AGATGTGTAAATTTTATGAG+CGG - chr2_1:31906977-31906996 Msa0205250:five_prime_UTR 25.0%
!! AGACAACATTCTAAAAAAGT+TGG - chr2_1:31907108-31907127 Msa0205250:five_prime_UTR 25.0%
! AAAAACTTGAAAGAAAGTTG+CGG - chr2_1:31907131-31907150 Msa0205250:five_prime_UTR 25.0%
TGTCAAATTGTGTGAACATA+AGG + chr2_1:31901383-31901402 None:intergenic 30.0%
AATGGAGAAATCTTTCATTG+TGG + chr2_1:31901681-31901700 None:intergenic 30.0%
GACAAATTTACAGTACTCTA+AGG + chr2_1:31901752-31901771 None:intergenic 30.0%
!!! ATGTAGTGATGTTTGTTTTG+TGG + chr2_1:31901859-31901878 None:intergenic 30.0%
! CATCACTACATAAATTTTGG+AGG - chr2_1:31901868-31901887 Msa0205250:intron 30.0%
!!! TCTTTTTCAGTTATGCTTGT+AGG - chr2_1:31901921-31901940 Msa0205250:intron 30.0%
! TAATTTTCCAGAAAGTTGAG+CGG + chr2_1:31902023-31902042 None:intergenic 30.0%
!!! TTACCAACACTAGGTTTTTT+TGG - chr2_1:31902056-31902075 Msa0205250:CDS 30.0%
!!! TACCAACACTAGGTTTTTTT+GGG - chr2_1:31902057-31902076 Msa0205250:CDS 30.0%
!! TGTGTTATCAAGTATTGATG+AGG - chr2_1:31902129-31902148 Msa0205250:CDS 30.0%
!! TTATCAAGTATTGATGAGGA+TGG - chr2_1:31902133-31902152 Msa0205250:CDS 30.0%
!! ACAGTTAGTTTGTAATAGAG+AGG - chr2_1:31902195-31902214 Msa0205250:CDS 30.0%
CAAATAAGCTAATAAGGCAT+CGG + chr2_1:31902227-31902246 None:intergenic 30.0%
CGCTTTCAAATAAGCTAATA+AGG + chr2_1:31902233-31902252 None:intergenic 30.0%
TAATTCTAATGTATCGGACT+CGG + chr2_1:31902290-31902309 None:intergenic 30.0%
GATGAAATACTAGAGAATGA+TGG - chr2_1:31902421-31902440 Msa0205250:intron 30.0%
AGAAACCAAAACTGAATTTG+AGG - chr2_1:31902558-31902577 Msa0205250:CDS 30.0%
! TTCATCCTCAAATTCAGTTT+TGG + chr2_1:31902566-31902585 None:intergenic 30.0%
TTACATCAACTTCTGAATCT+TGG + chr2_1:31902591-31902610 None:intergenic 30.0%
TCTAAACAAAGTAATAGCAG+AGG + chr2_1:31902671-31902690 None:intergenic 30.0%
ATTTCCAATACAGAAAAGAC+AGG + chr2_1:31902970-31902989 None:intergenic 30.0%
TAAATGGAGCTTAGTCTAAA+TGG + chr2_1:31903149-31903168 None:intergenic 30.0%
!! TAGTTCTAAAATTCGAGTTC+GGG + chr2_1:31903410-31903429 None:intergenic 30.0%
!! GTAGTTCTAAAATTCGAGTT+CGG + chr2_1:31903411-31903430 None:intergenic 30.0%
AATGATAACCACTATCCTTA+GGG + chr2_1:31903469-31903488 None:intergenic 30.0%
AAATGATAACCACTATCCTT+AGG + chr2_1:31903470-31903489 None:intergenic 30.0%
!! CCATTTTGAGTAGTAGTATA+CGG - chr2_1:31903513-31903532 Msa0205250:intron 30.0%
CAATATGCTGGATAGTAATT+AGG - chr2_1:31903678-31903697 Msa0205250:intron 30.0%
ATAAGACATGAAGCATATAG+GGG + chr2_1:31903802-31903821 None:intergenic 30.0%
CATAAGACATGAAGCATATA+GGG + chr2_1:31903803-31903822 None:intergenic 30.0%
TCATAAGACATGAAGCATAT+AGG + chr2_1:31903804-31903823 None:intergenic 30.0%
! GATGACATTATTTTCTACTC+TGG - chr2_1:31903882-31903901 Msa0205250:intron 30.0%
AATTTCAAGGCATATTGTTC+AGG - chr2_1:31904310-31904329 Msa0205250:intron 30.0%
!!! TTTTGAGAAGTGTTTCAAAC+AGG + chr2_1:31904419-31904438 None:intergenic 30.0%
CATATTTACTGTCAATCTTG+AGG + chr2_1:31904697-31904716 None:intergenic 30.0%
CTCAAGATTGACAGTAAATA+TGG - chr2_1:31904695-31904714 Msa0205250:intron 30.0%
! TTTACCTATGGAGTATTCTT+TGG + chr2_1:31905056-31905075 None:intergenic 30.0%
GACTATTTGGATAAGATTCA+AGG + chr2_1:31905178-31905197 None:intergenic 30.0%
! AAGGCTAAGATTTTTGACAT+CGG + chr2_1:31905280-31905299 None:intergenic 30.0%
AGTTGTGAAGAAATTCTTCA+CGG - chr2_1:31905327-31905346 Msa0205250:intron 30.0%
AAAGGAGAAAGATAGAACAT+AGG + chr2_1:31905826-31905845 None:intergenic 30.0%
TATATTATGGCTCAATTGAC+TGG - chr2_1:31905942-31905961 Msa0205250:intron 30.0%
TTCTATCTATCCCTTAGTTA+GGG - chr2_1:31905992-31906011 Msa0205250:CDS 30.0%
GACATTTGAACAATGAGAAA+AGG + chr2_1:31906113-31906132 None:intergenic 30.0%
CAAATGTCATATAATGTAGG+AGG - chr2_1:31906125-31906144 Msa0205250:CDS 30.0%
TCGATCAAATGTTGAGAAAT+TGG - chr2_1:31906239-31906258 Msa0205250:CDS 30.0%
! TGAAACAACTTCATCCATTT+TGG - chr2_1:31906296-31906315 Msa0205250:CDS 30.0%
CAGAATTCAGAATTGTATTG+TGG + chr2_1:31906577-31906596 None:intergenic 30.0%
!!! TTTTAGAATGTTGTCTTCCT+CGG + chr2_1:31907104-31907123 None:intergenic 30.0%
! TGAACTAAACTTTGAAGATG+AGG - chr2_1:31907192-31907211 Msa0205250:five_prime_UTR 30.0%
! GAACTAAACTTTGAAGATGA+GGG - chr2_1:31907193-31907212 Msa0205250:five_prime_UTR 30.0%
! TCCGCTATTTCATAAAATAG+CGG - chr2_1:31907243-31907262 Msa0205250:five_prime_UTR 30.0%
!! TCCGCTATTTTATGAAATAG+CGG + chr2_1:31907247-31907266 None:intergenic 30.0%
AAGTGTGAAAGCAGATTATT+TGG - chr2_1:31907294-31907313 Msa0205250:five_prime_UTR 30.0%
AACTAGCAAACAAAGTTCAG+AGG + chr2_1:31901555-31901574 None:intergenic 35.0%
! CTTTGTTTGCTAGTTTGAAG+AGG - chr2_1:31901560-31901579 Msa0205250:CDS 35.0%
! TTTGCTAGTTTGAAGAGGAA+GGG - chr2_1:31901565-31901584 Msa0205250:CDS 35.0%
!! AGTACTCTAAGGCTTTGTTT+GGG + chr2_1:31901741-31901760 None:intergenic 35.0%
!!! GTGATGTTTGTTTTGTGGTT+TGG + chr2_1:31901854-31901873 None:intergenic 35.0%
ATGCAGTTAGTGAGTATCAA+TGG - chr2_1:31901945-31901964 Msa0205250:intron 35.0%
! TCAGAAATTTATGGAGCATC+AGG + chr2_1:31901976-31901995 None:intergenic 35.0%
TGATGCTCCATAAATTTCTG+AGG - chr2_1:31901975-31901994 Msa0205250:intron 35.0%
AAGACAGCCTCAGAAATTTA+TGG + chr2_1:31901985-31902004 None:intergenic 35.0%
!! AACAACTTGTTACCAACACT+AGG - chr2_1:31902047-31902066 Msa0205250:CDS 35.0%
AACCCAAAAAAACCTAGTGT+TGG + chr2_1:31902062-31902081 None:intergenic 35.0%
!!! TTTTGGGTTATCTTTGTCTG+TGG - chr2_1:31902073-31902092 Msa0205250:CDS 35.0%
!! AAGTATTGATGAGGATGGAA+GGG - chr2_1:31902138-31902157 Msa0205250:CDS 35.0%
!! TAGCTTATTTGAAAGCGTTG+AGG - chr2_1:31902236-31902255 Msa0205250:CDS 35.0%
! GAACTCTTTTCAGCAAGAAA+AGG + chr2_1:31902385-31902404 None:intergenic 35.0%
CAGCATATGAACAAAGTTGT+CGG + chr2_1:31902449-31902468 None:intergenic 35.0%
ACAACTTCTACTTTATCCAC+AGG + chr2_1:31902511-31902530 None:intergenic 35.0%
!! TTCAGAAGTTGATGTAAGTG+TGG - chr2_1:31902594-31902613 Msa0205250:CDS 35.0%
!! TCAGAAGTTGATGTAAGTGT+GGG - chr2_1:31902595-31902614 Msa0205250:CDS 35.0%
TTATACAAGCTGATGCTTTC+AGG + chr2_1:31902786-31902805 None:intergenic 35.0%
!! GAAAGCATCAGCTTGTATAA+AGG - chr2_1:31902786-31902805 Msa0205250:intron 35.0%
GTTCTTATTGATATCAGCAG+CGG - chr2_1:31902817-31902836 Msa0205250:intron 35.0%
AAGCTCCATTTACTCCATTT+AGG - chr2_1:31903157-31903176 Msa0205250:intron 35.0%
AGCTCCATTTACTCCATTTA+GGG - chr2_1:31903158-31903177 Msa0205250:intron 35.0%
CAAACCCTAAATGGAGTAAA+TGG + chr2_1:31903165-31903184 None:intergenic 35.0%
! CATTTACTCCATTTAGGGTT+TGG - chr2_1:31903163-31903182 Msa0205250:intron 35.0%
TGTTGTGATATGAGAGAAGA+AGG - chr2_1:31903250-31903269 Msa0205250:intron 35.0%
GTTGTGATATGAGAGAAGAA+GGG - chr2_1:31903251-31903270 Msa0205250:intron 35.0%
TTTAGGCTAAGCTCCATTTA+GGG + chr2_1:31903378-31903397 None:intergenic 35.0%
ATTTAGGCTAAGCTCCATTT+AGG + chr2_1:31903379-31903398 None:intergenic 35.0%
TAAATGGAGCTTAGCCTAAA+TGG - chr2_1:31903378-31903397 Msa0205250:intron 35.0%
AATCTTTACCCTAAGGATAG+TGG - chr2_1:31903458-31903477 Msa0205250:intron 35.0%
CTACTCAAAATGGTATTCAG+TGG + chr2_1:31903506-31903525 None:intergenic 35.0%
CCGTATACTACTACTCAAAA+TGG + chr2_1:31903516-31903535 None:intergenic 35.0%
TACTACCAGAGCTATGAATA+AGG - chr2_1:31903710-31903729 Msa0205250:intron 35.0%
ACTACCAGAGCTATGAATAA+GGG - chr2_1:31903711-31903730 Msa0205250:intron 35.0%
GAAACTTTACAAGGCAGTAA+AGG - chr2_1:31904082-31904101 Msa0205250:intron 35.0%
CAGCATCATAGACTGTTTAT+TGG + chr2_1:31904124-31904143 None:intergenic 35.0%
! GCAGTTTTCTAATATGATGC+AGG + chr2_1:31904201-31904220 None:intergenic 35.0%
ATATTGTTCAGGACTATCTC+TGG - chr2_1:31904321-31904340 Msa0205250:intron 35.0%
GCAAGGGTCAGAAATATTAA+GGG + chr2_1:31904620-31904639 None:intergenic 35.0%
AGCAAGGGTCAGAAATATTA+AGG + chr2_1:31904621-31904640 None:intergenic 35.0%
ATATACCACCATCACACTTT+CGG + chr2_1:31904730-31904749 None:intergenic 35.0%
!!! GATAGGTGTTTTGATATCCA+TGG + chr2_1:31904812-31904831 None:intergenic 35.0%
CAAATTCTAGATTCTCCCAT+TGG + chr2_1:31905025-31905044 None:intergenic 35.0%
!! TTTATGATGTTGGCCTTGTA+TGG + chr2_1:31905079-31905098 None:intergenic 35.0%
CAAGGCCAACATCATAAAAA+AGG - chr2_1:31905081-31905100 Msa0205250:intron 35.0%
TGATACTAGAAGGTTATACC+AGG + chr2_1:31905257-31905276 None:intergenic 35.0%
TTATCACTTGTGAGACTGTT+TGG + chr2_1:31905306-31905325 None:intergenic 35.0%
AGAAATTCTTCACGGAATCA+TGG - chr2_1:31905335-31905354 Msa0205250:intron 35.0%
AAACATCAAGCAATGGCTTA+GGG + chr2_1:31905473-31905492 None:intergenic 35.0%
!! ATAACTTGCTGAGAAGAACT+AGG - chr2_1:31905633-31905652 Msa0205250:intron 35.0%
!! TAACTTGCTGAGAAGAACTA+GGG - chr2_1:31905634-31905653 Msa0205250:intron 35.0%
CAAACGAAAGATGGTGAAAA+GGG + chr2_1:31905803-31905822 None:intergenic 35.0%
! GCTCAATTGACTGGTATTTT+TGG - chr2_1:31905951-31905970 Msa0205250:CDS 35.0%
CTTCTATCTATCCCTTAGTT+AGG - chr2_1:31905991-31906010 Msa0205250:CDS 35.0%
ATGTCATATAATGTAGGAGG+AGG - chr2_1:31906128-31906147 Msa0205250:CDS 35.0%
TGTCATATAATGTAGGAGGA+GGG - chr2_1:31906129-31906148 Msa0205250:CDS 35.0%
TTACCAAATTGGAGTTTGAG+AGG - chr2_1:31906154-31906173 Msa0205250:CDS 35.0%
ATCGTCATTGAAAAAGCAAG+AGG - chr2_1:31906182-31906201 Msa0205250:CDS 35.0%
TCGTCATTGAAAAAGCAAGA+GGG - chr2_1:31906183-31906202 Msa0205250:CDS 35.0%
TTTGTAGGTTGTCACAAATG+TGG - chr2_1:31906483-31906502 Msa0205250:CDS 35.0%
TTGTATTGTGGTTATCACTG+AGG + chr2_1:31906565-31906584 None:intergenic 35.0%
TACAATTCAGTTTGAGAGTG+AGG - chr2_1:31906619-31906638 Msa0205250:CDS 35.0%
! AATCGCAACAAGAGTATGTA+AGG - chr2_1:31906678-31906697 Msa0205250:CDS 35.0%
TCCATTCGAAAAACAAAGCA+TGG + chr2_1:31906850-31906869 None:intergenic 35.0%
TTGCGCTAAACACTTCTTAT+TGG - chr2_1:31906922-31906941 Msa0205250:five_prime_UTR 35.0%
!!! TTTTTTCTGGCACTTTGATG+TGG - chr2_1:31907011-31907030 Msa0205250:five_prime_UTR 35.0%
!!! CAGAAGGTTTTTTATCGCAT+TGG + chr2_1:31907050-31907069 None:intergenic 35.0%
TTGAGCAATTATGGAACGTA+TGG + chr2_1:31907077-31907096 None:intergenic 35.0%
ACTTTCCACTTGCTTCTTTA+AGG + chr2_1:31907278-31907297 None:intergenic 35.0%
! GTTTGCTAGTTTGAAGAGGA+AGG - chr2_1:31901564-31901583 Msa0205250:CDS 40.0%
TAGTTTGAAGAGGAAGGGAA+AGG - chr2_1:31901570-31901589 Msa0205250:CDS 40.0%
AGGAAGGGAAAGGAAAGAAT+GGG - chr2_1:31901580-31901599 Msa0205250:CDS 40.0%
AGGAAAGAATGGGATGACTT+TGG - chr2_1:31901590-31901609 Msa0205250:CDS 40.0%
GGAAAGAATGGGATGACTTT+GGG - chr2_1:31901591-31901610 Msa0205250:CDS 40.0%
!! TTTGGGTTAGCTCAGTTTGT+AGG - chr2_1:31901608-31901627 Msa0205250:CDS 40.0%
! CTTTCATTGTGGAGTATCTG+AGG + chr2_1:31901670-31901689 None:intergenic 40.0%
!! CAGTACTCTAAGGCTTTGTT+TGG + chr2_1:31901742-31901761 None:intergenic 40.0%
!! CAAGTATTGATGAGGATGGA+AGG - chr2_1:31902137-31902156 Msa0205250:CDS 40.0%
CATATGCAAGGAAAGGAAGA+AGG - chr2_1:31902165-31902184 Msa0205250:CDS 40.0%
GAATTAGACTTTGCCTCTAC+TGG - chr2_1:31902304-31902323 Msa0205250:CDS 40.0%
! CTCTTTTCAGCAAGAAAAGG+AGG + chr2_1:31902382-31902401 None:intergenic 40.0%
GAAAAGAGTTCTGTACACGT+TGG - chr2_1:31902394-31902413 Msa0205250:intron 40.0%
CATATGCTGCAAATTGACCA+AGG - chr2_1:31902460-31902479 Msa0205250:CDS 40.0%
AGAAGTTGTAGAGTCGTTTG+AGG - chr2_1:31902522-31902541 Msa0205250:CDS 40.0%
! TCATCAACTGGTTCTTTGAC+CGG + chr2_1:31902643-31902662 None:intergenic 40.0%
TGTTACTAAAGCTATGCCTG+TGG - chr2_1:31902702-31902721 Msa0205250:intron 40.0%
CACGACATGAAGTCTTACTA+GGG + chr2_1:31902876-31902895 None:intergenic 40.0%
ACACGACATGAAGTCTTACT+AGG + chr2_1:31902877-31902896 None:intergenic 40.0%
CAGAAAAGACAGGAAGCAAA+AGG + chr2_1:31902960-31902979 None:intergenic 40.0%
! GCTTCCTGTCTTTTCTGTAT+TGG - chr2_1:31902963-31902982 Msa0205250:intron 40.0%
TTTGCAAGAGCAAGGAGTTT+GGG - chr2_1:31903117-31903136 Msa0205250:intron 40.0%
TCTTGCATCCAAACCCTAAA+TGG + chr2_1:31903362-31903381 None:intergenic 40.0%
TCTTGCATCCAAACCCTAAA+TGG - chr2_1:31903362-31903381 Msa0205250:intron 40.0%
! TAGTCTGAAACGTGAGAGAA+TGG + chr2_1:31903658-31903677 None:intergenic 40.0%
CGTTTCAGACTACAATATGC+TGG - chr2_1:31903666-31903685 Msa0205250:intron 40.0%
GAATCCCTTATTCATAGCTC+TGG + chr2_1:31903718-31903737 None:intergenic 40.0%
TACTCTGGCATGTTCTTTGT+AGG - chr2_1:31903897-31903916 Msa0205250:intron 40.0%
CAAGAGAACCAATTCTGCAA+GGG - chr2_1:31903920-31903939 Msa0205250:intron 40.0%
GCTAAATACCCTTGCAGAAT+TGG + chr2_1:31903931-31903950 None:intergenic 40.0%
GGGTATTTAGCGTACTATCA+TGG - chr2_1:31903940-31903959 Msa0205250:intron 40.0%
TTAGCGTACTATCATGGAGT+AGG - chr2_1:31903946-31903965 Msa0205250:intron 40.0%
AGAAAACTCAGCGTCATCTT+TGG + chr2_1:31903994-31904013 None:intergenic 40.0%
GGCAGAGAAGAAACTTTACA+AGG - chr2_1:31904073-31904092 Msa0205250:intron 40.0%
! TGGTGTGCCCCAAATATTTT+TGG - chr2_1:31904226-31904245 Msa0205250:intron 40.0%
! GGTGTGCCCCAAATATTTTT+GGG - chr2_1:31904227-31904246 Msa0205250:intron 40.0%
GTGCAGCCCAAAAATATTTG+GGG + chr2_1:31904236-31904255 None:intergenic 40.0%
CGTGCAGCCCAAAAATATTT+GGG + chr2_1:31904237-31904256 None:intergenic 40.0%
TCGTGCAGCCCAAAAATATT+TGG + chr2_1:31904238-31904257 None:intergenic 40.0%
!!! AAATATTTTTGGGCTGCACG+AGG - chr2_1:31904237-31904256 Msa0205250:intron 40.0%
!!! AATATTTTTGGGCTGCACGA+GGG - chr2_1:31904238-31904257 Msa0205250:intron 40.0%
CAAAACACCTATCGATAGTG+TGG - chr2_1:31904819-31904838 Msa0205250:CDS 40.0%
TGTGACCATTGCTACATGAT+CGG + chr2_1:31904845-31904864 None:intergenic 40.0%
ATGTAGCAATGGTCACACTT+GGG - chr2_1:31904848-31904867 Msa0205250:CDS 40.0%
GACGAGATTTACCATGCTTT+CGG - chr2_1:31904870-31904889 Msa0205250:CDS 40.0%
ACGAGATTTACCATGCTTTC+GGG - chr2_1:31904871-31904890 Msa0205250:CDS 40.0%
! GCTTTTCAAAGTGGCGAATA+TGG + chr2_1:31904902-31904921 None:intergenic 40.0%
GACATTGCAGAGTTGAAAGT+AGG - chr2_1:31904998-31905017 Msa0205250:intron 40.0%
AGAGTTGAAAGTAGGTCCAA+TGG - chr2_1:31905006-31905025 Msa0205250:intron 40.0%
GAGTTGAAAGTAGGTCCAAT+GGG - chr2_1:31905007-31905026 Msa0205250:intron 40.0%
CGAACCAAAGAATACTCCAT+AGG - chr2_1:31905049-31905068 Msa0205250:intron 40.0%
CTCCATAGGTAAACCATACA+AGG - chr2_1:31905063-31905082 Msa0205250:intron 40.0%
TTCTCGCTGTTCATATTCCT+TGG - chr2_1:31905105-31905124 Msa0205250:intron 40.0%
CTTATCCAAATAGTCAGCCA+TGG - chr2_1:31905183-31905202 Msa0205250:intron 40.0%
ATGGAACCATCAAGTCTTCT+CGG - chr2_1:31905202-31905221 Msa0205250:intron 40.0%
! CAACAACCCTCATGAGATTT+TGG - chr2_1:31905227-31905246 Msa0205250:intron 40.0%
GGTTTGCCAAAATCTCATGA+GGG + chr2_1:31905236-31905255 None:intergenic 40.0%
AGGTTTGCCAAAATCTCATG+AGG + chr2_1:31905237-31905256 None:intergenic 40.0%
!! TCATGAGATTTTGGCAAACC+TGG - chr2_1:31905236-31905255 Msa0205250:intron 40.0%
TTGACATCGGTGATACTAGA+AGG + chr2_1:31905267-31905286 None:intergenic 40.0%
TTGTGAGACTGTTTGGAAGA+AGG + chr2_1:31905299-31905318 None:intergenic 40.0%
ATTCTTCACGGAATCATGGA+TGG - chr2_1:31905339-31905358 Msa0205250:intron 40.0%
! CGATCATTTTCCAGAGAGAA+CGG - chr2_1:31905392-31905411 Msa0205250:intron 40.0%
CAAACATCAAGCAATGGCTT+AGG + chr2_1:31905474-31905493 None:intergenic 40.0%
GGTCATCAAACATCAAGCAA+TGG + chr2_1:31905480-31905499 None:intergenic 40.0%
! TGATGTTTGATGACCATGAG+TGG - chr2_1:31905485-31905504 Msa0205250:intron 40.0%
TCCAACTTGTCAGTTAAGAG+TGG - chr2_1:31905520-31905539 Msa0205250:intron 40.0%
TCCACTCTTAACTGACAAGT+TGG + chr2_1:31905524-31905543 None:intergenic 40.0%
!! CGTAGTTGGTAAAAACCAGA+CGG - chr2_1:31905551-31905570 Msa0205250:intron 40.0%
GCAAACGAAAGATGGTGAAA+AGG + chr2_1:31905804-31905823 None:intergenic 40.0%
GAACATAGGCAAACGAAAGA+TGG + chr2_1:31905812-31905831 None:intergenic 40.0%
TATCTATCCCTTAGTTAGGG+TGG - chr2_1:31905995-31906014 Msa0205250:CDS 40.0%
ACAATTGCCACCCTAACTAA+GGG + chr2_1:31906005-31906024 None:intergenic 40.0%
AACAATTGCCACCCTAACTA+AGG + chr2_1:31906006-31906025 None:intergenic 40.0%
CTTCCTCTCAAACTCCAATT+TGG + chr2_1:31906160-31906179 None:intergenic 40.0%
ATTGAAAAAGCAAGAGGGTG+AGG - chr2_1:31906188-31906207 Msa0205250:CDS 40.0%
! AGTCTGATTTGATAAGCCTG+CGG - chr2_1:31906262-31906281 Msa0205250:CDS 40.0%
CAAATGTGGAGGATAATGCA+TGG - chr2_1:31906497-31906516 Msa0205250:CDS 40.0%
TTGAGAGTGAGGCTTCTTAT+TGG - chr2_1:31906630-31906649 Msa0205250:CDS 40.0%
AAGCTGAATCCACTTACTGA+GGG + chr2_1:31906705-31906724 None:intergenic 40.0%
TAAGCTGAATCCACTTACTG+AGG + chr2_1:31906706-31906725 None:intergenic 40.0%
CTAAGGAATGGCAATGAAAG+CGG - chr2_1:31906734-31906753 Msa0205250:five_prime_UTR 40.0%
!! AGGGTAAGAAGTACCTTATC+TGG + chr2_1:31906818-31906837 None:intergenic 40.0%
!!! GCCATGCTTTGTTTTTCGAA+TGG - chr2_1:31906846-31906865 Msa0205250:five_prime_UTR 40.0%
TGGAACGTATGGATAACAGA+AGG + chr2_1:31907066-31907085 None:intergenic 40.0%
ACGTTCCATAATTGCTCAAC+AGG - chr2_1:31907078-31907097 Msa0205250:five_prime_UTR 40.0%
AACTTGAAAGAAAGTTGCGG+AGG - chr2_1:31907134-31907153 Msa0205250:five_prime_UTR 40.0%
TTTGAAGATGAGGGTGATGA+AGG - chr2_1:31907202-31907221 Msa0205250:five_prime_UTR 40.0%
ATGAAGGTAATATAAGCCCC+AGG - chr2_1:31907218-31907237 Msa0205250:five_prime_UTR 40.0%
!! TTATGAAATAGCGGATGCCT+GGG + chr2_1:31907238-31907257 None:intergenic 40.0%
!! TTTATGAAATAGCGGATGCC+TGG + chr2_1:31907239-31907258 None:intergenic 40.0%
AGAAGCCTTAAAGAAGCAAG+TGG - chr2_1:31907270-31907289 Msa0205250:five_prime_UTR 40.0%
! TCTGAGGTTATCAAGAGTCA+TGG + chr2_1:31907341-31907360 None:intergenic 40.0%
AATAGCCTCAATTGCTTGAG+AGG + chr2_1:31907413-31907432 None:intergenic 40.0%
GTGATAGAGAGAGAGAGAGA+GGG + chr2_1:31901418-31901437 None:intergenic 45.0%
TGTGATAGAGAGAGAGAGAG+AGG + chr2_1:31901419-31901438 None:intergenic 45.0%
GAGGAAGGGAAAGGAAAGAA+TGG - chr2_1:31901579-31901598 Msa0205250:CDS 45.0%
CATATTATATGCAGGAGCCG+TGG - chr2_1:31901638-31901657 Msa0205250:CDS 45.0%
! AGTATCTGAGGTTCGAACCA+CGG + chr2_1:31901658-31901677 None:intergenic 45.0%
!! AGGCTTTGTTTGGGAGGATA+GGG + chr2_1:31901732-31901751 None:intergenic 45.0%
!! AAGGCTTTGTTTGGGAGGAT+AGG + chr2_1:31901733-31901752 None:intergenic 45.0%
!! ACTCTAAGGCTTTGTTTGGG+AGG + chr2_1:31901738-31901757 None:intergenic 45.0%
!! TCTGAGGCTGTCTTTTCTCT+AGG - chr2_1:31901991-31902010 Msa0205250:intron 45.0%
ATTGATGAGGATGGAAGGGT+TGG - chr2_1:31902142-31902161 Msa0205250:CDS 45.0%
!! TTGAAAGCGTTGAGGAACAC+CGG - chr2_1:31902244-31902263 Msa0205250:CDS 45.0%
!! GTCGTTGCTATTTCAACCTG+TGG - chr2_1:31902492-31902511 Msa0205250:CDS 45.0%
AGTTGTAGAGTCGTTTGAGG+AGG - chr2_1:31902525-31902544 Msa0205250:CDS 45.0%
AGTCGTTTGAGGAGGAGAAT+TGG - chr2_1:31902533-31902552 Msa0205250:CDS 45.0%
GTCGTTTGAGGAGGAGAATT+GGG - chr2_1:31902534-31902553 Msa0205250:CDS 45.0%
GCAGAGGAACTATCATCAAC+TGG + chr2_1:31902655-31902674 None:intergenic 45.0%
AAAGCTATGCCTGTGGTGAT+TGG - chr2_1:31902709-31902728 Msa0205250:intron 45.0%
AGACAGGAAGCAAAAGGTCA+TGG + chr2_1:31902954-31902973 None:intergenic 45.0%
GTTTGCAAGAGCAAGGAGTT+TGG - chr2_1:31903116-31903135 Msa0205250:intron 45.0%
! GCTAAGCTCCATTTAGGGTT+TGG + chr2_1:31903373-31903392 None:intergenic 45.0%
AGTTCGGGTATGCTCCATTT+AGG + chr2_1:31903395-31903414 None:intergenic 45.0%
GCAAGAGAACCAATTCTGCA+AGG - chr2_1:31903919-31903938 Msa0205250:intron 45.0%
CATGTAGCAATGGTCACACT+TGG - chr2_1:31904847-31904866 Msa0205250:CDS 45.0%
! GGCCTTGTATGGTTTACCTA+TGG + chr2_1:31905068-31905087 None:intergenic 45.0%
CGCTGTTCATATTCCTTGGT+AGG - chr2_1:31905109-31905128 Msa0205250:intron 45.0%
AATGAAATCATGCCTCCTGC+TGG + chr2_1:31905139-31905158 None:intergenic 45.0%
TGGTTCCATGGCTGACTATT+TGG + chr2_1:31905191-31905210 None:intergenic 45.0%
! GAGAAGACTTGATGGTTCCA+TGG + chr2_1:31905203-31905222 None:intergenic 45.0%
TGGAACCATCAAGTCTTCTC+GGG - chr2_1:31905203-31905222 Msa0205250:intron 45.0%
GATCGATGTTCTTGGTGAGA+TGG - chr2_1:31905431-31905450 Msa0205250:intron 45.0%
TGATGACCATGAGTGGTAGT+TGG - chr2_1:31905492-31905511 Msa0205250:intron 45.0%
TTGGTAAAAACCAGACGGTG+TGG - chr2_1:31905556-31905575 Msa0205250:intron 45.0%
ATCTGATTCAGCCATGAGCT+AGG - chr2_1:31905582-31905601 Msa0205250:intron 45.0%
TCTGATTCAGCCATGAGCTA+GGG - chr2_1:31905583-31905602 Msa0205250:intron 45.0%
TTTCTCTCTTCCCTAGCTCA+TGG + chr2_1:31905596-31905615 None:intergenic 45.0%
CTAGGGAAGAGAGAAATGTC+TGG - chr2_1:31905600-31905619 Msa0205250:intron 45.0%
GGAGGAGGGAATTACCAAAT+TGG - chr2_1:31906143-31906162 Msa0205250:CDS 45.0%
! AGAGGGTGAGGACATTGATT+TGG - chr2_1:31906200-31906219 Msa0205250:CDS 45.0%
! TGAAGAGCTTTTACCCCAGT+TGG - chr2_1:31906329-31906348 Msa0205250:CDS 45.0%
GCAGTTAATGCAACCAACTG+GGG + chr2_1:31906345-31906364 None:intergenic 45.0%
GGCAGTTAATGCAACCAACT+GGG + chr2_1:31906346-31906365 None:intergenic 45.0%
CAGTTGGTTGCATTAACTGC+CGG - chr2_1:31906345-31906364 Msa0205250:CDS 45.0%
AGTTGGTTGCATTAACTGCC+GGG - chr2_1:31906346-31906365 Msa0205250:CDS 45.0%
GTAGGTTGTCACAAATGTGG+AGG - chr2_1:31906486-31906505 Msa0205250:CDS 45.0%
ATGTAAGGACCCTCAGTAAG+TGG - chr2_1:31906693-31906712 Msa0205250:exon 45.0%
TTCAGCTTACCAACTGCCTA+AGG - chr2_1:31906717-31906736 Msa0205250:five_prime_UTR 45.0%
CTTACCAACTGCCTAAGGAA+TGG - chr2_1:31906722-31906741 Msa0205250:five_prime_UTR 45.0%
ATTGCCATTCCTTAGGCAGT+TGG + chr2_1:31906729-31906748 None:intergenic 45.0%
CGCTTTCATTGCCATTCCTT+AGG + chr2_1:31906736-31906755 None:intergenic 45.0%
AGATGGTGCGAATAGAAGAG+TGG + chr2_1:31906763-31906782 None:intergenic 45.0%
!! GCTTGATGGGTTACCAGATA+AGG - chr2_1:31906802-31906821 Msa0205250:five_prime_UTR 45.0%
TGGCACTTTGATGTGGTTAC+AGG - chr2_1:31907018-31907037 Msa0205250:five_prime_UTR 45.0%
CACTTTGATGTGGTTACAGG+AGG - chr2_1:31907021-31907040 Msa0205250:five_prime_UTR 45.0%
TTTGATGTGGTTACAGGAGG+TGG - chr2_1:31907024-31907043 Msa0205250:five_prime_UTR 45.0%
! TTTTCTCTGCATCTCGTCCA+GGG + chr2_1:31907170-31907189 None:intergenic 45.0%
! TTTTTCTCTGCATCTCGTCC+AGG + chr2_1:31907171-31907190 None:intergenic 45.0%
!! TATGAAATAGCGGATGCCTG+GGG + chr2_1:31907237-31907256 None:intergenic 45.0%
!! GATGTGGAAGTCTAGTTCTG+AGG + chr2_1:31907357-31907376 None:intergenic 45.0%
ATCAGTGACACGAAGAGATG+TGG + chr2_1:31907373-31907392 None:intergenic 45.0%
! ACATCTCTTCGTGTCACTGA+TGG - chr2_1:31907372-31907391 Msa0205250:five_prime_UTR 45.0%
TGCTTCCTCTCAAGCAATTG+AGG - chr2_1:31907405-31907424 Msa0205250:five_prime_UTR 45.0%
!! TTAAAATAAAAAACAATAAA+AGG - chr2_1:31903226-31903245 Msa0205250:intron 5.0%
!! TTTATTACATTAAAAAAAAA+AGG + chr2_1:31905719-31905738 None:intergenic 5.0%
!!! AAGATTAATTAAAATATTTT+TGG + chr2_1:31905765-31905784 None:intergenic 5.0%
!!! AAAAATATTTTAATTAATCT+TGG - chr2_1:31905764-31905783 Msa0205250:intron 5.0%
! TGGAAGGGTTGGCATATGCA+AGG - chr2_1:31902153-31902172 Msa0205250:CDS 50.0%
! GGGTTGGCATATGCAAGGAA+AGG - chr2_1:31902158-31902177 Msa0205250:CDS 50.0%
TCAGCAAGAAAAGGAGGCAG+CGG + chr2_1:31902376-31902395 None:intergenic 50.0%
AGTGTGGGAAGATCACGTAG+CGG - chr2_1:31902610-31902629 Msa0205250:CDS 50.0%
CCTGTGGTGATTGGTAGAAG+CGG - chr2_1:31902718-31902737 Msa0205250:intron 50.0%
CTGTGGTGATTGGTAGAAGC+GGG - chr2_1:31902719-31902738 Msa0205250:intron 50.0%
TGGTAGAAGCGGGAGAACAT+TGG - chr2_1:31902729-31902748 Msa0205250:intron 50.0%
TAGAAGCGGGAGAACATTGG+AGG - chr2_1:31902732-31902751 Msa0205250:intron 50.0%
AGAAGCGGGAGAACATTGGA+GGG - chr2_1:31902733-31902752 Msa0205250:intron 50.0%
ACTCTTCTGCGGGAGAATTC+TGG - chr2_1:31902844-31902863 Msa0205250:intron 50.0%
CCTTGCTCTTGCAAACAGAG+AGG + chr2_1:31903112-31903131 None:intergenic 50.0%
CCTCTCTGTTTGCAAGAGCA+AGG - chr2_1:31903109-31903128 Msa0205250:intron 50.0%
GGGTTTGGATGCAAGACATG+TGG - chr2_1:31903178-31903197 Msa0205250:intron 50.0%
GGGTTTGGATGCAAGACATG+TGG + chr2_1:31903178-31903197 None:intergenic 50.0%
AGCGTCATCTTTGGTGAACG+TGG + chr2_1:31903985-31904004 None:intergenic 50.0%
CTAGTCCTAGTGAACCATGC+AGG - chr2_1:31904012-31904031 Msa0205250:intron 50.0%
!! CAGAAGTGCCGAAAGTGTGA+TGG - chr2_1:31904719-31904738 Msa0205250:intron 50.0%
!! AAGTGCCGAAAGTGTGATGG+TGG - chr2_1:31904722-31904741 Msa0205250:CDS 50.0%
TGGTGGTATATGCGTCTGAG+AGG - chr2_1:31904739-31904758 Msa0205250:CDS 50.0%
CAATGTAGCACAGACTGCAC+AGG + chr2_1:31904771-31904790 None:intergenic 50.0%
CTGTGCAGTCTGTGCTACAT+TGG - chr2_1:31904769-31904788 Msa0205250:CDS 50.0%
! TGTGCTACATTGGTTGTCCG+AGG - chr2_1:31904779-31904798 Msa0205250:CDS 50.0%
! CTACATTGGTTGTCCGAGGA+GGG - chr2_1:31904783-31904802 Msa0205250:CDS 50.0%
ATATCCATGGTCACCCTCCT+CGG + chr2_1:31904799-31904818 None:intergenic 50.0%
TGATCGGCCACACTATCGAT+AGG + chr2_1:31904829-31904848 None:intergenic 50.0%
TGTGGCCGATCATGTAGCAA+TGG - chr2_1:31904837-31904856 Msa0205250:CDS 50.0%
TATGGTCGATCCCGAAAGCA+TGG + chr2_1:31904884-31904903 None:intergenic 50.0%
! TTCGCCACTTTGAAAAGCCG+AGG - chr2_1:31904904-31904923 Msa0205250:intron 50.0%
! TCTGCCTCGGCTTTTCAAAG+TGG + chr2_1:31904911-31904930 None:intergenic 50.0%
! ACTTTGAAAAGCCGAGGCAG+AGG - chr2_1:31904910-31904929 Msa0205250:intron 50.0%
GGAACCATCAAGTCTTCTCG+GGG - chr2_1:31905204-31905223 Msa0205250:intron 50.0%
CCAGAGAGAACGGTCTGATT+CGG - chr2_1:31905402-31905421 Msa0205250:intron 50.0%
CAGAGAGAACGGTCTGATTC+GGG - chr2_1:31905403-31905422 Msa0205250:intron 50.0%
GGGCACAAGATCGATGTTCT+TGG - chr2_1:31905423-31905442 Msa0205250:intron 50.0%
TGACCATGAGTGGTAGTTGG+TGG - chr2_1:31905495-31905514 Msa0205250:intron 50.0%
AAGCCACCAACTACCACTCA+TGG + chr2_1:31905501-31905520 None:intergenic 50.0%
GTAAAAACCAGACGGTGTGG+AGG - chr2_1:31905559-31905578 Msa0205250:intron 50.0%
! CTGATTTGATAAGCCTGCGG+CGG - chr2_1:31906265-31906284 Msa0205250:CDS 50.0%
CGGCAGTTAATGCAACCAAC+TGG + chr2_1:31906347-31906366 None:intergenic 50.0%
ACTGAGGTTACTCAGCTGCT+GGG + chr2_1:31906549-31906568 None:intergenic 50.0%
TTCGCACCATCTGTGAACAG+TGG - chr2_1:31906771-31906790 Msa0205250:five_prime_UTR 50.0%
TCGCACCATCTGTGAACAGT+GGG - chr2_1:31906772-31906791 Msa0205250:five_prime_UTR 50.0%
AAGCTCCCACTGTTCACAGA+TGG + chr2_1:31906780-31906799 None:intergenic 50.0%
ATCTGTGAACAGTGGGAGCT+TGG - chr2_1:31906779-31906798 Msa0205250:five_prime_UTR 50.0%
TCTGTGAACAGTGGGAGCTT+GGG - chr2_1:31906780-31906799 Msa0205250:five_prime_UTR 50.0%
CTCGGCCTGTTGAGCAATTA+TGG + chr2_1:31907086-31907105 None:intergenic 50.0%
CATAATTGCTCAACAGGCCG+AGG - chr2_1:31907084-31907103 Msa0205250:five_prime_UTR 50.0%
GTTTGGGAGGATAGGGCTTC+TGG + chr2_1:31901725-31901744 None:intergenic 55.0%
GAACTGCCTAAGTGTGGCAC+CGG + chr2_1:31902266-31902285 None:intergenic 55.0%
CTCGGTGAACTGCCTAAGTG+TGG + chr2_1:31902272-31902291 None:intergenic 55.0%
AGGTAGCAAATCAGGCGGTG+GGG + chr2_1:31902350-31902369 None:intergenic 55.0%
GAGGTAGCAAATCAGGCGGT+GGG + chr2_1:31902351-31902370 None:intergenic 55.0%
GGTGGAGGTAGCAAATCAGG+CGG + chr2_1:31902355-31902374 None:intergenic 55.0%
AGCGGTGGAGGTAGCAAATC+AGG + chr2_1:31902358-31902377 None:intergenic 55.0%
GCAACGACGAGCTCAAACCT+TGG + chr2_1:31902480-31902499 None:intergenic 55.0%
GTGTGGGAAGATCACGTAGC+GGG - chr2_1:31902611-31902630 Msa0205250:CDS 55.0%
! ATCACGTAGCGGGAAGCAAC+CGG - chr2_1:31902621-31902640 Msa0205250:CDS 55.0%
CCGCTTCTACCAATCACCAC+AGG + chr2_1:31902721-31902740 None:intergenic 55.0%
GCAGCGGAGATACTCTTCTG+CGG - chr2_1:31902833-31902852 Msa0205250:intron 55.0%
CAGCGGAGATACTCTTCTGC+GGG - chr2_1:31902834-31902853 Msa0205250:intron 55.0%
TCCTAGTGAACCATGCAGGC+CGG - chr2_1:31904016-31904035 Msa0205250:intron 55.0%
AGTGTGGCACAATGAGCTCC+CGG + chr2_1:31904038-31904057 None:intergenic 55.0%
! GCTACATTGGTTGTCCGAGG+AGG - chr2_1:31904782-31904801 Msa0205250:CDS 55.0%
!! ACCTGTTGACTCCTCTGCCT+CGG + chr2_1:31904924-31904943 None:intergenic 55.0%
GTTGCCCCGAGAAGACTTGA+TGG + chr2_1:31905211-31905230 None:intergenic 55.0%
CCGAATCAGACCGTTCTCTC+TGG + chr2_1:31905405-31905424 None:intergenic 55.0%
GAGTGGAGCAGTGACGTAGT+TGG - chr2_1:31905537-31905556 Msa0205250:intron 55.0%
ATCAGATCCTCCACACCGTC+TGG + chr2_1:31905569-31905588 None:intergenic 55.0%
AGATCAGTGCCTGCGACTGA+TGG + chr2_1:31906526-31906545 None:intergenic 55.0%
CACTGAGGTTACTCAGCTGC+TGG + chr2_1:31906550-31906569 None:intergenic 55.0%
AGTGGGAGCTTGGGCTTGAT+GGG - chr2_1:31906789-31906808 Msa0205250:five_prime_UTR 55.0%
CAAAGCATGGCGCGTTGTGA+GGG + chr2_1:31906837-31906856 None:intergenic 55.0%
ACAAAGCATGGCGCGTTGTG+AGG + chr2_1:31906838-31906857 None:intergenic 55.0%
GCGACTGCCGCTCAACTTTC+TGG - chr2_1:31902013-31902032 Msa0205250:CDS 60.0%
!! GGAACACCGGTGCCACACTT+AGG - chr2_1:31902257-31902276 Msa0205250:CDS 60.0%
AAATCAGGCGGTGGGGAAGG+CGG + chr2_1:31902343-31902362 None:intergenic 60.0%
AGCAAATCAGGCGGTGGGGA+AGG + chr2_1:31902346-31902365 None:intergenic 60.0%
GGAGGTAGCAAATCAGGCGG+TGG + chr2_1:31902352-31902371 None:intergenic 60.0%
AGAAAAGGAGGCAGCGGTGG+AGG + chr2_1:31902370-31902389 None:intergenic 60.0%
GCAAGAAAAGGAGGCAGCGG+TGG + chr2_1:31902373-31902392 None:intergenic 60.0%
CCTAGTGAACCATGCAGGCC+GGG - chr2_1:31904017-31904036 Msa0205250:intron 60.0%
TTGTCCGAGGAGGGTGACCA+TGG - chr2_1:31904792-31904811 Msa0205250:CDS 60.0%
TTTCACTGATGCACCGCCGC+AGG + chr2_1:31906281-31906300 None:intergenic 60.0%
GCATGGATGCCATCAGTCGC+AGG - chr2_1:31906514-31906533 Msa0205250:CDS 60.0%
CAGTGGGAGCTTGGGCTTGA+TGG - chr2_1:31906788-31906807 Msa0205250:five_prime_UTR 60.0%
GGCTTCAGGCAGGCCAGTAG+AGG + chr2_1:31902320-31902339 None:intergenic 65.0%
AATCAGGCGGTGGGGAAGGC+GGG + chr2_1:31902342-31902361 None:intergenic 65.0%
CCCGGCCTGCATGGTTCACT+AGG + chr2_1:31904020-31904039 None:intergenic 65.0%
CAATGAGCTCCCGGCCTGCA+TGG + chr2_1:31904029-31904048 None:intergenic 65.0%
GCCGAGGCAGAGGAGTCAAC+AGG - chr2_1:31904920-31904939 Msa0205250:intron 65.0%
ATCAGGCGGTGGGGAAGGCG+GGG + chr2_1:31902341-31902360 None:intergenic 70.0%
TCCTTGGTAGGCGCGCCAGC+AGG - chr2_1:31905121-31905140 Msa0205250:intron 70.0%
TCCTGCTGGCGCGCCTACCA+AGG + chr2_1:31905125-31905144 None:intergenic 70.0%
TTGGTAGGCGCGCCAGCAGG+AGG - chr2_1:31905124-31905143 Msa0205250:intron 70.0%
!! GCGGAGGTGCTCGAAGTCCC+TGG - chr2_1:31907150-31907169 Msa0205250:five_prime_UTR 70.0%
GGGAAGGCGGGGCTTCAGGC+AGG + chr2_1:31902330-31902349 None:intergenic 75.0%
GGTGGGGAAGGCGGGGCTTC+AGG + chr2_1:31902334-31902353 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 31901371 31907453 31901371 ID=Msa0205250;Name=Msa0205250
chr2_1 mRNA 31901371 31907453 31901371 ID=Msa0205250-mRNA-1;Parent=Msa0205250;Name=Msa0205250-mRNA-1;_AED=0.15;_eAED=0.15;_QI=750|1|0.8|1|0.75|1|5|0|637
chr2_1 exon 31901371 31901784 31901371 ID=Msa0205250-mRNA-1:exon:11185;Parent=Msa0205250-mRNA-1
chr2_1 exon 31902001 31902334 31902001 ID=Msa0205250-mRNA-1:exon:11184;Parent=Msa0205250-mRNA-1
chr2_1 exon 31902457 31902680 31902457 ID=Msa0205250-mRNA-1:exon:11183;Parent=Msa0205250-mRNA-1
chr2_1 exon 31904721 31904905 31904721 ID=Msa0205250-mRNA-1:exon:11182;Parent=Msa0205250-mRNA-1
chr2_1 exon 31905947 31907453 31905947 ID=Msa0205250-mRNA-1:exon:11181;Parent=Msa0205250-mRNA-1
chr2_1 five_prime_UTR 31906704 31907453 31906704 ID=Msa0205250-mRNA-1:five_prime_utr;Parent=Msa0205250-mRNA-1
chr2_1 CDS 31905947 31906703 31905947 ID=Msa0205250-mRNA-1:cds;Parent=Msa0205250-mRNA-1
chr2_1 CDS 31904721 31904905 31904721 ID=Msa0205250-mRNA-1:cds;Parent=Msa0205250-mRNA-1
chr2_1 CDS 31902457 31902680 31902457 ID=Msa0205250-mRNA-1:cds;Parent=Msa0205250-mRNA-1
chr2_1 CDS 31902001 31902334 31902001 ID=Msa0205250-mRNA-1:cds;Parent=Msa0205250-mRNA-1
chr2_1 CDS 31901371 31901784 31901371 ID=Msa0205250-mRNA-1:cds;Parent=Msa0205250-mRNA-1
Gene Sequence

>Msa0205250

ATGGGCTGTGTGTTATCAAGTATTGATGAGGATGGAAGGGTTGGCATATGCAAGGAAAGGAAGAAGGTAATCAAACAGTTAGTTTGTAATAGAGAGGAGTTTTCCGATGCCTTATTAGCTTATTTGAAAGCGTTGAGGAACACCGGTGCCACACTTAGGCAGTTCACCGAGTCCGATACATTAGAATTAGACTTTGCCTCTACTGGCCTGCCTGAAGCCCCGCCTTCCCCACCGCCTGATTTGCTACCTCCACCGCTGCCTCCTTTTCTTGCTGAAAAGAGTTCTGTACACGTTGGCGAAGATGAAATACTAGAGAATGATGGCACCGACAACTTTGTTCATATGCTGCAAATTGACCAAGGTTTGAGCTCGTCGTTGCTATTTCAACCTGTGGATAAAGTAGAAGTTGTAGAGTCGTTTGAGGAGGAGAATTGGGAAGAAACCAAAACTGAATTTGAGGATGAAGTCCAAGATTCAGAAGTTGATGTAAGTGTGGGAAGATCACGTAGCGGGAAGCAACCGGTCAAAGAACCAGTTGATGATAGTTCCTCTGCTATTACTTTGTTTAGAAAAGAAACTCATGTTACTAAAGCTATGCCTGTGGTGATTGGTAGAAGCGGGAGAACATTGGAGGGTATAGTTAAAGAGTTAGATGATCATTTCCTGAAAGCATCAGCTTGTATAAAGGAAATCGCTGTTCTTATTGATATCAGCAGCGGAGATACTCTTCTGCGGGAGAATTCTGGTCGTCACCCTAGCAAGAGAACCAATTCTGCAAGGGTATTTAGCGTACTATCATGGAGTAGGCATACTAAGTCATCCACGTTCACCAAAGATGACGCTGAGTTTTCTAGTCCTAGTGAACCATGCAGGCCGGGAGCTCATTGTGCCACACTTAAAAAATTATATGCGGCAGAGAAGAAACTTTACAAGGCAGTAAAGGAGGAGGGAATTACCAAATTGGAGTTTGAGAGGAAGTCATCGTCATTGAAAAAGCAAGAGGGTGAGGACATTGATTTGGTTAAAATTGACAAAATTCGATCAAATGTTGAGAAATTGGAGTCTGATTTGATAAGCCTGCGGCGGTGCATCAGTGAAACAACTTCATCCATTTTGGAACTTATAGATGAAGAGCTTTTACCCCAGTTGGTTGCATTAACTGCCGGGTTGTCACAAATGTGGAGGATAATGCATGGATGCCATCAGTCGCAGGCACTGATCTCCCAGCAGCTGAGTAACCTCAGTGATAACCACAATACAATTCTGAATTCTGAATCTGAATATCATCATCAAGCTACAATTCAGTTTGAGAGTGAGGCTTCTTATTGGTATAATAGCTTCTGTAAACTTGTAAAATCGCAACAAGAGTATGTAAGGACCCTCAGTAAGTGGATTCAGCTTACCAACTGCCTAAGGAATGGCAATGAAAGCGGCAACCACTCTTCTATTCGCACCATCTGTGAACAGTGGGAGCTTGGGCTTGATGGGTTACCAGATAAGGAGGTGGCCAATGCGATAAAAAACCTTCTGTTATCCATACGTTCCATAATTGCTCAACAGGCCGAGGAAGACAACATTCTAAAAAAGTTGGAAAAACTTGAAAGAAAGTTGCGGAGGTGCTCGAAGTCCCTGGACGAGATGCAGAGAAAAATTGAACTAAACTTTGAAGATGAGGGTGATGAAGGTAATATAAGCCCCAGGCATCCGCTATTTCATAAAATAGCGGAAACAGAAGCCTTAAAGAAGCAAGTGGAAAGTGTGAAAGCAGATTATTTGGATTCTGTTCAGTATAGTAGAACCATGACTCTTGATAACCTCAGAACTAGACTTCCACATCTCTTCGTGTCACTGATGGAATTTTCAAGTGCTTCCTCTCAAGCAATTGAGGCTATTCATTCTCAGTCAAGCCAATAG
Protein sequence

>Msa0205250

MGCVLSSIDEDGRVGICKERKKVIKQLVCNREEFSDALLAYLKALRNTGATLRQFTESDTLELDFASTGLPEAPPSPPPDLLPPPLPPFLAEKSSVHVGEDEILENDGTDNFVHMLQIDQGLSSSLLFQPVDKVEVVESFEEENWEETKTEFEDEVQDSEVDVSVGRSRSGKQPVKEPVDDSSSAITLFRKETHVTKAMPVVIGRSGRTLEGIVKELDDHFLKASACIKEIAVLIDISSGDTLLRENSGRHPSKRTNSARVFSVLSWSRHTKSSTFTKDDAEFSSPSEPCRPGAHCATLKKLYAAEKKLYKAVKEEGITKLEFERKSSSLKKQEGEDIDLVKIDKIRSNVEKLESDLISLRRCISETTSSILELIDEELLPQLVALTAGLSQMWRIMHGCHQSQALISQQLSNLSDNHNTILNSESEYHHQATIQFESEASYWYNSFCKLVKSQQEYVRTLSKWIQLTNCLRNGNESGNHSSIRTICEQWELGLDGLPDKEVANAIKNLLLSIRSIIAQQAEEDNILKKLEKLERKLRRCSKSLDEMQRKIELNFEDEGDEGNISPRHPLFHKIAETEALKKQVESVKADYLDSVQYSRTMTLDNLRTRLPHLFVSLMEFSSASSQAIEAIHSQSSQ*