AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1127170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127170 MtrunA17_Chr7g0269861 98.432 574 5 1 1 570 1 574 0.0 1155
Msa1127170 MtrunA17_Chr1g0194851 69.983 593 155 6 1 570 1 593 0.0 795
Msa1127170 MtrunA17_Chr3g0134181 53.049 492 191 9 2 477 5 472 1.09e-164 477
Msa1127170 MtrunA17_Chr1g0164711 68.702 131 41 0 307 437 60 190 8.03e-59 194
Msa1127170 MtrunA17_Chr4g0038931 24.045 445 254 10 24 462 657 1023 2.97e-20 95.5
Msa1127170 MtrunA17_Chr7g0257081 26.891 238 153 6 232 462 926 1149 1.99e-19 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127170 AT4G02100.1 63.492 567 173 8 12 570 6 546 0.0 693
Msa1127170 AT2G47440.1 65.179 560 151 8 12 570 10 526 0.0 682
Msa1127170 AT2G47440.2 64.909 550 149 8 22 570 9 515 0.0 661
Msa1127170 AT3G62570.1 57.941 573 215 8 3 570 1 552 0.0 630
Msa1127170 AT1G02650.1 54.927 548 207 7 16 563 6 513 0.0 555
Msa1127170 AT1G02650.2 54.815 540 204 7 24 563 11 510 0.0 543
Msa1127170 AT5G12430.1 27.636 275 172 6 227 489 867 1126 1.63e-22 102
Msa1127170 AT2G41520.3 22.523 444 252 10 46 480 606 966 9.85e-17 84.7
Msa1127170 AT2G41520.1 22.523 444 252 10 46 480 706 1066 1.05e-16 84.7
Msa1127170 AT2G41520.2 27.273 209 130 5 280 480 841 1035 2.88e-12 70.5

Find 142 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTGGTGGGTTGTTGGTTT+GGG 0.142222 7_3:-78681798 None:intergenic
GAAATTTAAAGAGGATTTAA+TGG 0.206952 7_3:-78683137 None:intergenic
ATGAAATTTGTAGCTTTATC+TGG 0.219434 7_3:-78682432 None:intergenic
CAACATCTTTGAATCTTCTT+AGG 0.226823 7_3:-78680451 None:intergenic
GGTGAAGCATGCTGCCATTT+AGG 0.252385 7_3:+78681646 Msa1127170:CDS
GGTGTGGTGGGTTGTTGGTT+TGG 0.252636 7_3:-78681799 None:intergenic
TTGTAGCTTTATCTGGCTTA+TGG 0.271225 7_3:-78682425 None:intergenic
TTCATTGTTGTTGTATAGAT+TGG 0.327452 7_3:+78682518 Msa1127170:CDS
TAGTATTGAGACACTACTTT+TGG 0.327760 7_3:+78683095 Msa1127170:three_prime_UTR
TTTCAATTCTTGAATCTTAG+TGG 0.334226 7_3:-78682289 None:intergenic
TTCTTGAATCTTAGTGGTTA+AGG 0.343497 7_3:-78682283 None:intergenic
TTGATCCAAACGCGGTGATA+TGG 0.349593 7_3:-78680396 None:intergenic
CATCCTCCATCAGTCCTAAA+TGG 0.364318 7_3:-78681660 None:intergenic
GTGGCGGTGTGGTGGGTTGT+TGG 0.365856 7_3:-78681804 None:intergenic
TGGGTGTTCCCGTTCTGAAT+TGG 0.369585 7_3:+78682374 Msa1127170:CDS
GAATTGCTAGCGCAGCATTC+CGG 0.370872 7_3:+78681710 Msa1127170:CDS
TGTGTGCAGATACTTGGTTT+TGG 0.377172 7_3:+78681624 Msa1127170:intron
CAAGTGCTTGAATGCAGGTT+GGG 0.381214 7_3:-78682092 None:intergenic
AATGTAATCTTGAAGCATAT+TGG 0.389327 7_3:-78680474 None:intergenic
AGGGGCTCGTGGCGGTGTGG+TGG 0.390479 7_3:-78681812 None:intergenic
TCATTCGCCATTCTCAAACT+TGG 0.391758 7_3:-78680497 None:intergenic
AATGAATTGAATATGATTAA+CGG 0.397159 7_3:+78683179 Msa1127170:three_prime_UTR
TCTAAATCGTGAAGTGAATC+AGG 0.407704 7_3:-78682153 None:intergenic
GTTGATTACTATGCATTGAT+TGG 0.409360 7_3:+78682342 Msa1127170:CDS
TTGTACAAACAAAATGCAAA+TGG 0.415319 7_3:+78682971 Msa1127170:three_prime_UTR
TTTAGCCATATCACCGCGTT+TGG 0.415618 7_3:+78680391 Msa1127170:CDS
AGGAACAAGAAAGAGAGAAC+AGG 0.420946 7_3:-78679848 None:intergenic
CAGCTGCACGACGGCGGAGG+AGG 0.424219 7_3:-78681882 None:intergenic
TGATCTTAAGAAGAAGGTTA+TGG 0.427625 7_3:+78680634 Msa1127170:CDS
TGCTTCGAAGAGTGAAGCTC+TGG 0.428658 7_3:-78682118 None:intergenic
GGGGCTCGTGGCGGTGTGGT+GGG 0.431108 7_3:-78681811 None:intergenic
CACTTTCTGTTTCGTTGAGA+GGG 0.431292 7_3:-78681831 None:intergenic
TTTGGGGTGTCTCCAGCCAA+TGG 0.436063 7_3:-78681781 None:intergenic
GTGAATCCTGCGGTGTTTCA+AGG 0.438883 7_3:+78682762 Msa1127170:CDS
TTACGTGATCGTAAACTTCC+CGG 0.441406 7_3:+78682204 Msa1127170:CDS
TTACATTCCAAGTTTGAGAA+TGG 0.442091 7_3:+78680490 Msa1127170:CDS
ATTGGTGGGAAGGGCTATGT+TGG 0.443070 7_3:+78682895 Msa1127170:three_prime_UTR
TGTTTCTGATCTTAAGAAGA+AGG 0.445367 7_3:+78680628 Msa1127170:CDS
AGCTCTTTCCAATTCAGAAC+GGG 0.445368 7_3:-78682382 None:intergenic
GTGGCGTTTCCATGCTGGAC+CGG 0.445828 7_3:-78682223 None:intergenic
TGTGGTGGGTTGTTGGTTTG+GGG 0.447654 7_3:-78681797 None:intergenic
TTGAAACAAAGATTATCTTC+TGG 0.452233 7_3:+78682306 Msa1127170:CDS
AGAGATGATGAATATATAAG+AGG 0.454139 7_3:-78679871 None:intergenic
GGCTATGTTGGAGATGTTAC+CGG 0.454733 7_3:+78682907 Msa1127170:three_prime_UTR
TCCTCTATTAACTATCCCAT+TGG 0.455666 7_3:+78681765 Msa1127170:CDS
ACATTGTGGCGTTTCCATGC+TGG 0.457036 7_3:-78682228 None:intergenic
TGATTGTGTGTGCAGATACT+TGG 0.457505 7_3:+78681618 Msa1127170:intron
GCAATGGTTCTTCTCCAAAC+AGG 0.463178 7_3:+78681682 Msa1127170:CDS
ACTCGGCGAGGAAGCCTTGT+GGG 0.463578 7_3:-78681984 None:intergenic
GCTTCATACTTCACCGGCAT+TGG 0.464103 7_3:-78682846 None:intergenic
GGATTTAATGGAAGGGTTGA+AGG 0.464436 7_3:-78683125 None:intergenic
ATAGCATATGAAATTTAAAG+AGG 0.468313 7_3:-78683146 None:intergenic
GGTTTCAAGTGCTTGAATGC+AGG 0.468380 7_3:-78682097 None:intergenic
CATTGAAAGGTGTGAATTTG+CGG 0.473244 7_3:+78682452 Msa1127170:CDS
ACGATTTAATCGACCAATGC+CGG 0.474881 7_3:+78682833 Msa1127170:CDS
TTTAAAGAGGATTTAATGGA+AGG 0.475506 7_3:-78683133 None:intergenic
GTAAAAGTTGTGAGAAAGAA+GGG 0.487805 7_3:+78680666 Msa1127170:CDS
TCAAGTGCTTGAATGCAGGT+TGG 0.488120 7_3:-78682093 None:intergenic
GCATCTGCACACCGTTCTGC+TGG 0.492922 7_3:+78682021 Msa1127170:CDS
TTGGGGTGTCTCCAGCCAAT+GGG 0.495456 7_3:-78681780 None:intergenic
TTACCGGCAGAGGGAATCTC+TGG 0.496591 7_3:+78682923 Msa1127170:three_prime_UTR
ACGTGATATTGATACTGTTA+AGG 0.496784 7_3:+78682479 Msa1127170:CDS
AAGCTACAAATTTCATTGAA+AGG 0.497204 7_3:+78682439 Msa1127170:CDS
TGTAAAAGTTGTGAGAAAGA+AGG 0.497562 7_3:+78680665 Msa1127170:CDS
GCTTCTTTCATCTGATTCAC+CGG 0.497678 7_3:+78680577 Msa1127170:CDS
ACACTTTCTGTTTCGTTGAG+AGG 0.500008 7_3:-78681832 None:intergenic
TTGAAACACCGCAGGATTCA+CGG 0.502686 7_3:-78682760 None:intergenic
AGAAGAGAAAGAAGAAAACC+AGG 0.506340 7_3:+78679957 Msa1127170:five_prime_UTR
TGGCGTTTCCATGCTGGACC+GGG 0.508257 7_3:-78682222 None:intergenic
GCACTCGCTGCCCTCGACGC+TGG 0.509640 7_3:+78681904 Msa1127170:CDS
GTGCAGCTGCACGACGGCGG+AGG 0.510527 7_3:-78681885 None:intergenic
GTTGTATAGATTGGTTCAGA+AGG 0.512610 7_3:+78682527 Msa1127170:CDS
CTATTAACTATCCCATTGGC+TGG 0.515604 7_3:+78681769 Msa1127170:CDS
GCGAATGAAGATCCTTCCTC+TGG 0.518376 7_3:+78680512 Msa1127170:CDS
TCTGATAGTTCTTCTAGAGA+AGG 0.518715 7_3:+78680548 Msa1127170:CDS
TGAGTAGAGACCAGCGTCGA+GGG 0.518981 7_3:-78681914 None:intergenic
GCCAATGGGATAGTTAATAG+AGG 0.519008 7_3:-78681766 None:intergenic
GTAAGATACAGAGAGATTCC+AGG 0.519030 7_3:+78682249 Msa1127170:CDS
TGTACAAACAAAATGCAAAT+GGG 0.519485 7_3:+78682972 Msa1127170:three_prime_UTR
TTAAAGCTCTGATCTCGAAC+CGG 0.521070 7_3:-78680596 None:intergenic
ACCAGCAGACACTCTCTCTC+CGG 0.522583 7_3:-78681729 None:intergenic
GTTGGAGATGTTACCGGCAG+AGG 0.522651 7_3:+78682913 Msa1127170:three_prime_UTR
CTCAATGCTTCATACTTCAC+CGG 0.529803 7_3:-78682852 None:intergenic
CTTAAGAAGAAGGTTATGGC+AGG 0.531276 7_3:+78680638 Msa1127170:CDS
GTGAGAAAGAAGGGCAATGG+AGG 0.534292 7_3:+78680675 Msa1127170:CDS
TTGTATAGATTGGTTCAGAA+GGG 0.541753 7_3:+78682528 Msa1127170:CDS
GATTTAATGGAAGGGTTGAA+GGG 0.550646 7_3:-78683124 None:intergenic
TTAAAGAGGATTTAATGGAA+GGG 0.554856 7_3:-78683132 None:intergenic
GAACCAGAGATTCCCTCTGC+CGG 0.556807 7_3:-78682926 None:intergenic
GAAGAAGAAGAACCAGAGGA+AGG 0.559166 7_3:-78680524 None:intergenic
CACTCGGCGAGGAAGCCTTG+TGG 0.560936 7_3:-78681985 None:intergenic
TTGGAGATGTTACCGGCAGA+GGG 0.561440 7_3:+78682914 Msa1127170:three_prime_UTR
GTTGTGAGAAAGAAGGGCAA+TGG 0.562233 7_3:+78680672 Msa1127170:CDS
ATGCTGCCATTTAGGACTGA+TGG 0.563097 7_3:+78681654 Msa1127170:CDS
AGGACTGATGGAGGATGCAA+TGG 0.565558 7_3:+78681666 Msa1127170:CDS
GGAGGAATTTGATGTGGCTG+AGG 0.569430 7_3:-78681864 None:intergenic
GGTCGCCGTGCTGCCCCACA+AGG 0.573594 7_3:+78681970 Msa1127170:CDS
GATGATGAATATATAAGAGG+AGG 0.580874 7_3:-78679868 None:intergenic
GGAAGCCTTGTGGGGCAGCA+CGG 0.584047 7_3:-78681975 None:intergenic
TACAAGAAGATATCAAAGGC+TGG 0.584462 7_3:-78682737 None:intergenic
TCCGGAGAGAGAGTGTCTGC+TGG 0.585361 7_3:+78681728 Msa1127170:CDS
AGGAAGCTGCTGAGAAACAA+AGG 0.590239 7_3:+78682583 Msa1127170:CDS
TGCCGTGATCTTGCAGTGGT+AGG 0.595602 7_3:+78682792 Msa1127170:CDS
GGAATTTGATGTGGCTGAGG+AGG 0.595613 7_3:-78681861 None:intergenic
CGAGAAGATTCAAAGCTGAA+AGG 0.596568 7_3:-78680361 None:intergenic
TGCTCTGTGCATGTAGCACT+CGG 0.598080 7_3:-78682001 None:intergenic
CCGCTACAGAAAAGAAACAT+TGG 0.598730 7_3:+78680030 Msa1127170:CDS
ACTTTCTGTTTCGTTGAGAG+GGG 0.600446 7_3:-78681830 None:intergenic
TTCCTACCACTGCAAGATCA+CGG 0.604484 7_3:-78682794 None:intergenic
GAGCTCTTTCCAATTCAGAA+CGG 0.612218 7_3:-78682383 None:intergenic
CTACAGAAAAGAAACATTGG+TGG 0.614005 7_3:+78680033 Msa1127170:CDS
GAGAGGGGCTCGTGGCGGTG+TGG 0.615235 7_3:-78681815 None:intergenic
AAGCTCTTGAGCTTAGAGCT+AGG 0.620753 7_3:+78680417 Msa1127170:CDS
CTCGGCGAGGAAGCCTTGTG+GGG 0.621473 7_3:-78681983 None:intergenic
AACACACCTTGAAACACCGC+AGG 0.621979 7_3:-78682768 None:intergenic
GGTAGGAAGCTTGTTGACGC+AGG 0.625122 7_3:+78682809 Msa1127170:CDS
AGTGCGGTTACAATCAGCGA+TGG 0.629036 7_3:-78682058 None:intergenic
TATAAGATATGAGAAACGAA+AGG 0.631020 7_3:-78679773 None:intergenic
TTGGTGGCTCACAAACCGTA+AGG 0.631059 7_3:+78680049 Msa1127170:CDS
AAGATATGAGAAACGAAAGG+AGG 0.631416 7_3:-78679770 None:intergenic
GGAACAAGAAAGAGAGAACA+GGG 0.633247 7_3:-78679847 None:intergenic
TTAAGAAGAAGGTTATGGCA+GGG 0.636621 7_3:+78680639 Msa1127170:CDS
GAAGAGAAAGAAGAAAACCA+GGG 0.641669 7_3:+78679958 Msa1127170:five_prime_UTR
ACGGTACAAGAAGATATCAA+AGG 0.644354 7_3:-78682741 None:intergenic
GTAAACTTCCCGGTCCAGCA+TGG 0.644733 7_3:+78682214 Msa1127170:CDS
CAGCGAGTGCAGCTGCACGA+CGG 0.645174 7_3:-78681891 None:intergenic
TCTCTCTGTATCTTACATTG+TGG 0.650016 7_3:-78682242 None:intergenic
GGCGGAGGAGGAATTTGATG+TGG 0.651030 7_3:-78681870 None:intergenic
TTCTTGTACCGTGAATCCTG+CGG 0.652851 7_3:+78682752 Msa1127170:CDS
TGCATAGTAATCAACACTAG+TGG 0.653769 7_3:-78682334 None:intergenic
GCATTGATTGGAGTTCGACG+TGG 0.654550 7_3:+78682354 Msa1127170:CDS
CTGAGTAGAGACCAGCGTCG+AGG 0.660918 7_3:-78681915 None:intergenic
TAATAGAGGAAAACTGTCGT+CGG 0.664622 7_3:-78681752 None:intergenic
CTGCAATTCGACCAGCAGAA+CGG 0.668383 7_3:-78682032 None:intergenic
CATTGATTGGAGTTCGACGT+GGG 0.672757 7_3:+78682355 Msa1127170:CDS
CGAGTGCAGCTGCACGACGG+CGG 0.675639 7_3:-78681888 None:intergenic
TCGTTGAGAGGGGCTCGTGG+CGG 0.683214 7_3:-78681820 None:intergenic
CTGCCATTTAGGACTGATGG+AGG 0.697675 7_3:+78681657 Msa1127170:CDS
AAATTCACAGAACAAAATGG+CGG 0.723594 7_3:+78679989 Msa1127170:exon
TTGGGTCTAGTGAAAGAGTG+CGG 0.726603 7_3:-78682074 None:intergenic
TGTGCATGTAGCACTCGGCG+AGG 0.731603 7_3:-78681996 None:intergenic
TCAAGAGCTTGATCCAAACG+CGG 0.749008 7_3:-78680404 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAATATAAGATATAAAAAA+AGG - chr7_3:78683038-78683057 None:intergenic 10.0%
!! AAAAAAAAACATCATTAACT+AGG - chr7_3:78680113-78680132 None:intergenic 15.0%
!! AACTATTATTATGCAAAATT+CGG - chr7_3:78681454-78681473 None:intergenic 15.0%
!! TAAGATATAAAAAAAGGAAA+AGG - chr7_3:78683032-78683051 None:intergenic 15.0%
!! AATGAATTGAATATGATTAA+CGG + chr7_3:78683179-78683198 Msa1127170:three_prime_UTR 15.0%
!!! TAATAATTTTTTGCTTCTAA+TGG + chr7_3:78683202-78683221 Msa1127170:three_prime_UTR 15.0%
!! AAAAAATTCACAGAACAAAA+TGG + chr7_3:78679986-78680005 Msa1127170:exon 20.0%
!! AAACACAAAACATTAACAAA+AGG - chr7_3:78680262-78680281 None:intergenic 20.0%
!!! ATTTGGAAGTTTTTTAGTAA+GGG + chr7_3:78680795-78680814 Msa1127170:intron 20.0%
!!! AAAGACTATTTTTGATTGTA+TGG + chr7_3:78681396-78681415 Msa1127170:intron 20.0%
!! TAATAATAGTTTCACTGAAA+TGG + chr7_3:78681463-78681482 Msa1127170:intron 20.0%
!!! TCAATTTGATTGATTTTTGT+GGG - chr7_3:78681519-78681538 None:intergenic 20.0%
!!! TTCAATTTGATTGATTTTTG+TGG - chr7_3:78681520-78681539 None:intergenic 20.0%
!! ACACACAATCAAAATTATTT+AGG - chr7_3:78681609-78681628 None:intergenic 20.0%
!! GAAATTTAAAGAGGATTTAA+TGG - chr7_3:78683140-78683159 None:intergenic 20.0%
!! ATAGCATATGAAATTTAAAG+AGG - chr7_3:78683149-78683168 None:intergenic 20.0%
! TATAAGATATGAGAAACGAA+AGG - chr7_3:78679776-78679795 None:intergenic 25.0%
! AGAGATGATGAATATATAAG+AGG - chr7_3:78679874-78679893 None:intergenic 25.0%
!!! TCTTGTTTTGATTTGATTAG+AGG + chr7_3:78679928-78679947 Msa1127170:five_prime_UTR 25.0%
! ACTAGAAACAACTATAAACT+TGG - chr7_3:78680211-78680230 None:intergenic 25.0%
! AATGTAATCTTGAAGCATAT+TGG - chr7_3:78680477-78680496 None:intergenic 25.0%
!!! CATTTGGAAGTTTTTTAGTA+AGG + chr7_3:78680794-78680813 Msa1127170:intron 25.0%
!! TCATTTCATTTTCTTCAATG+TGG + chr7_3:78680822-78680841 Msa1127170:intron 25.0%
!! ATTTGTTACTCTTTCTATAC+AGG + chr7_3:78680932-78680951 Msa1127170:intron 25.0%
! TTATTAACCTTTGTGATTGA+CGG - chr7_3:78681143-78681162 None:intergenic 25.0%
! AAGGTTAATAATTGTTACCT+AGG + chr7_3:78681152-78681171 Msa1127170:intron 25.0%
! AGGTTAATAATTGTTACCTA+GGG + chr7_3:78681153-78681172 Msa1127170:intron 25.0%
!! TCAAATTGAATGTTTTTCCT+TGG + chr7_3:78681530-78681549 Msa1127170:intron 25.0%
!!! GTTTTTTTGTTGTCGTTAAA+TGG + chr7_3:78681559-78681578 Msa1127170:intron 25.0%
! CATTTCTCAAAAATAGTAGA+CGG + chr7_3:78681949-78681968 Msa1127170:CDS 25.0%
! TTTCAATTCTTGAATCTTAG+TGG - chr7_3:78682292-78682311 None:intergenic 25.0%
! TTGAAACAAAGATTATCTTC+TGG + chr7_3:78682306-78682325 Msa1127170:CDS 25.0%
!!! ATGAAATTTGTAGCTTTATC+TGG - chr7_3:78682435-78682454 None:intergenic 25.0%
! AAGCTACAAATTTCATTGAA+AGG + chr7_3:78682439-78682458 Msa1127170:CDS 25.0%
!! TTCATTGTTGTTGTATAGAT+TGG + chr7_3:78682518-78682537 Msa1127170:CDS 25.0%
!!! TAAGAGTAGTAATGTTTTTG+TGG + chr7_3:78682707-78682726 Msa1127170:CDS 25.0%
!!! GCTAAGTTTTGATGAAAAAT+TGG + chr7_3:78682877-78682896 Msa1127170:exon 25.0%
!!! AAGTTTTGATGAAAAATTGG+TGG + chr7_3:78682880-78682899 Msa1127170:exon 25.0%
!!! AGTTTTGATGAAAAATTGGT+GGG + chr7_3:78682881-78682900 Msa1127170:exon 25.0%
! TTGTACAAACAAAATGCAAA+TGG + chr7_3:78682971-78682990 Msa1127170:three_prime_UTR 25.0%
! TGTACAAACAAAATGCAAAT+GGG + chr7_3:78682972-78682991 Msa1127170:three_prime_UTR 25.0%
! TTAAAGAGGATTTAATGGAA+GGG - chr7_3:78683135-78683154 None:intergenic 25.0%
! TTTAAAGAGGATTTAATGGA+AGG - chr7_3:78683136-78683155 None:intergenic 25.0%
GATGATGAATATATAAGAGG+AGG - chr7_3:78679871-78679890 None:intergenic 30.0%
!!! TGTGAATTTTTTTCAAACCC+TGG - chr7_3:78679978-78679997 None:intergenic 30.0%
AAATTCACAGAACAAAATGG+CGG + chr7_3:78679989-78680008 Msa1127170:exon 30.0%
TGTGTGAAAATGTTACCTTA+CGG - chr7_3:78680067-78680086 None:intergenic 30.0%
!!! TTTTGTTTTGTTGCAGATTG+TGG + chr7_3:78680283-78680302 Msa1127170:intron 30.0%
CAACATCTTTGAATCTTCTT+AGG - chr7_3:78680454-78680473 None:intergenic 30.0%
TTACATTCCAAGTTTGAGAA+TGG + chr7_3:78680490-78680509 Msa1127170:CDS 30.0%
! TGTTTCTGATCTTAAGAAGA+AGG + chr7_3:78680628-78680647 Msa1127170:CDS 30.0%
TGATCTTAAGAAGAAGGTTA+TGG + chr7_3:78680634-78680653 Msa1127170:CDS 30.0%
TGTAAAAGTTGTGAGAAAGA+AGG + chr7_3:78680665-78680684 Msa1127170:CDS 30.0%
GTAAAAGTTGTGAGAAAGAA+GGG + chr7_3:78680666-78680685 Msa1127170:CDS 30.0%
! TTTGAAATCTGTCTCTCATT+TGG + chr7_3:78680778-78680797 Msa1127170:intron 30.0%
TTCAATGCACGATAAAAAGT+TGG + chr7_3:78681045-78681064 Msa1127170:intron 30.0%
CTTTCATCTTCTATTGTCAA+TGG + chr7_3:78681290-78681309 Msa1127170:intron 30.0%
AACAAAAAAACCATTCACCA+AGG - chr7_3:78681550-78681569 None:intergenic 30.0%
! TAGCAATTCTTTTTCCTGTT+TGG - chr7_3:78681699-78681718 None:intergenic 30.0%
!! TATTTTTGAGAAATGGCGAA+TGG - chr7_3:78681944-78681963 None:intergenic 30.0%
!!! CGTCTACTATTTTTGAGAAA+TGG - chr7_3:78681951-78681970 None:intergenic 30.0%
TTCTTGAATCTTAGTGGTTA+AGG - chr7_3:78682286-78682305 None:intergenic 30.0%
! GTTGATTACTATGCATTGAT+TGG + chr7_3:78682342-78682361 Msa1127170:CDS 30.0%
ACGTGATATTGATACTGTTA+AGG + chr7_3:78682479-78682498 Msa1127170:CDS 30.0%
! TTGTATAGATTGGTTCAGAA+GGG + chr7_3:78682528-78682547 Msa1127170:CDS 30.0%
!! GATGAGTAATGTTTTAGATG+AGG + chr7_3:78682563-78682582 Msa1127170:CDS 30.0%
GTAAAAAAAGTTTAGACTGC+CGG + chr7_3:78682994-78683013 Msa1127170:three_prime_UTR 30.0%
! GAAAAGGTGACAAAATTTTC+CGG - chr7_3:78683016-78683035 None:intergenic 30.0%
!! TAGTATTGAGACACTACTTT+TGG + chr7_3:78683095-78683114 Msa1127170:three_prime_UTR 30.0%
AAGATATGAGAAACGAAAGG+AGG - chr7_3:78679773-78679792 None:intergenic 35.0%
!!! AGAGAGAGAATTTTTGGTCA+GGG - chr7_3:78679802-78679821 None:intergenic 35.0%
AGAAGAGAAAGAAGAAAACC+AGG + chr7_3:78679957-78679976 Msa1127170:five_prime_UTR 35.0%
GAAGAGAAAGAAGAAAACCA+GGG + chr7_3:78679958-78679977 Msa1127170:five_prime_UTR 35.0%
! CCAATGTTTCTTTTCTGTAG+CGG - chr7_3:78680033-78680052 None:intergenic 35.0%
CTACAGAAAAGAAACATTGG+TGG + chr7_3:78680033-78680052 Msa1127170:CDS 35.0%
! TCTGATAGTTCTTCTAGAGA+AGG + chr7_3:78680548-78680567 Msa1127170:CDS 35.0%
TTAAGAAGAAGGTTATGGCA+GGG + chr7_3:78680639-78680658 Msa1127170:CDS 35.0%
TTTCTTCAATGTGGAGTTTC+TGG + chr7_3:78680831-78680850 Msa1127170:intron 35.0%
CAATCTGATCTCACACAAAT+AGG - chr7_3:78680902-78680921 None:intergenic 35.0%
AATTATTCACATGTGCACTG+AGG + chr7_3:78681106-78681125 Msa1127170:intron 35.0%
! CTTTTTACCGTCAATCACAA+AGG + chr7_3:78681133-78681152 Msa1127170:intron 35.0%
TTGTTACCTAGGGAAATTCT+TGG + chr7_3:78681163-78681182 Msa1127170:intron 35.0%
TAGGGAAATTCTTGGTTGTA+GGG + chr7_3:78681171-78681190 Msa1127170:intron 35.0%
GAGACAATGCATTGTAGAAA+TGG - chr7_3:78681271-78681290 None:intergenic 35.0%
GAGATAATGCATTCTTGAAG+TGG + chr7_3:78681322-78681341 Msa1127170:intron 35.0%
! GAATGTTTTTCCTTGGTGAA+TGG + chr7_3:78681537-78681556 Msa1127170:intron 35.0%
TAATAGAGGAAAACTGTCGT+CGG - chr7_3:78681755-78681774 None:intergenic 35.0%
TCCTCTATTAACTATCCCAT+TGG + chr7_3:78681765-78681784 Msa1127170:CDS 35.0%
TCTAAATCGTGAAGTGAATC+AGG - chr7_3:78682156-78682175 None:intergenic 35.0%
TCTCTCTGTATCTTACATTG+TGG - chr7_3:78682245-78682264 None:intergenic 35.0%
TGCATAGTAATCAACACTAG+TGG - chr7_3:78682337-78682356 None:intergenic 35.0%
!! TTGTAGCTTTATCTGGCTTA+TGG - chr7_3:78682428-78682447 None:intergenic 35.0%
! CATTGAAAGGTGTGAATTTG+CGG + chr7_3:78682452-78682471 Msa1127170:CDS 35.0%
! GTTGTATAGATTGGTTCAGA+AGG + chr7_3:78682527-78682546 Msa1127170:CDS 35.0%
AGCTGAGCTGAAAAATAACA+AGG + chr7_3:78682677-78682696 Msa1127170:CDS 35.0%
TACAAGAAGATATCAAAGGC+TGG - chr7_3:78682740-78682759 None:intergenic 35.0%
ACGGTACAAGAAGATATCAA+AGG - chr7_3:78682744-78682763 None:intergenic 35.0%
TTGATGAAAAATTGGTGGGA+AGG + chr7_3:78682885-78682904 Msa1127170:three_prime_UTR 35.0%
TGATGAAAAATTGGTGGGAA+GGG + chr7_3:78682886-78682905 Msa1127170:three_prime_UTR 35.0%
GATTTAATGGAAGGGTTGAA+GGG - chr7_3:78683127-78683146 None:intergenic 35.0%
!!! GAGAGAGAGAATTTTTGGTC+AGG - chr7_3:78679803-78679822 None:intergenic 40.0%
! GAGAGGAGAGAGAGAATTTT+TGG - chr7_3:78679808-78679827 None:intergenic 40.0%
GGAACAAGAAAGAGAGAACA+GGG - chr7_3:78679850-78679869 None:intergenic 40.0%
AGGAACAAGAAAGAGAGAAC+AGG - chr7_3:78679851-78679870 None:intergenic 40.0%
CCGCTACAGAAAAGAAACAT+TGG + chr7_3:78680030-78680049 Msa1127170:CDS 40.0%
! GAATCGGAAGACAGCATTTT+CGG + chr7_3:78680179-78680198 Msa1127170:intron 40.0%
CGAGAAGATTCAAAGCTGAA+AGG - chr7_3:78680364-78680383 None:intergenic 40.0%
TCATTCGCCATTCTCAAACT+TGG - chr7_3:78680500-78680519 None:intergenic 40.0%
AGAAGAAGAAGAAGAACCAG+AGG - chr7_3:78680531-78680550 None:intergenic 40.0%
GCTTCTTTCATCTGATTCAC+CGG + chr7_3:78680577-78680596 Msa1127170:CDS 40.0%
! TTAAAGCTCTGATCTCGAAC+CGG - chr7_3:78680599-78680618 None:intergenic 40.0%
CTTAAGAAGAAGGTTATGGC+AGG + chr7_3:78680638-78680657 Msa1127170:CDS 40.0%
CTACAACCAAGAATTTCCCT+AGG - chr7_3:78681172-78681191 None:intergenic 40.0%
CTAGGGAAATTCTTGGTTGT+AGG + chr7_3:78681170-78681189 Msa1127170:intron 40.0%
TGGACAATGTTTGAGAACCA+TGG + chr7_3:78681194-78681213 Msa1127170:intron 40.0%
TGTGAGACTCTATGATACCA+TGG - chr7_3:78681214-78681233 None:intergenic 40.0%
TCATCCCTTATTACCTCTTC+TGG - chr7_3:78681348-78681367 None:intergenic 40.0%
TTCGGCAAAGATCAGTATCA+TGG - chr7_3:78681436-78681455 None:intergenic 40.0%
TGATTGTGTGTGCAGATACT+TGG + chr7_3:78681618-78681637 Msa1127170:intron 40.0%
! TGTGTGCAGATACTTGGTTT+TGG + chr7_3:78681624-78681643 Msa1127170:intron 40.0%
!! GTGTGCAGATACTTGGTTTT+GGG + chr7_3:78681625-78681644 Msa1127170:intron 40.0%
GCCAATGGGATAGTTAATAG+AGG - chr7_3:78681769-78681788 None:intergenic 40.0%
CTATTAACTATCCCATTGGC+TGG + chr7_3:78681769-78681788 Msa1127170:CDS 40.0%
ACTTTCTGTTTCGTTGAGAG+GGG - chr7_3:78681833-78681852 None:intergenic 40.0%
CACTTTCTGTTTCGTTGAGA+GGG - chr7_3:78681834-78681853 None:intergenic 40.0%
ACACTTTCTGTTTCGTTGAG+AGG - chr7_3:78681835-78681854 None:intergenic 40.0%
TTACGTGATCGTAAACTTCC+CGG + chr7_3:78682204-78682223 Msa1127170:CDS 40.0%
GTAAGATACAGAGAGATTCC+AGG + chr7_3:78682249-78682268 Msa1127170:CDS 40.0%
! GTTAAGGCACAAAGTTTTCC+TGG - chr7_3:78682270-78682289 None:intergenic 40.0%
AGCTCTTTCCAATTCAGAAC+GGG - chr7_3:78682385-78682404 None:intergenic 40.0%
GAGCTCTTTCCAATTCAGAA+CGG - chr7_3:78682386-78682405 None:intergenic 40.0%
ACGATTTAATCGACCAATGC+CGG + chr7_3:78682833-78682852 Msa1127170:CDS 40.0%
CTCAATGCTTCATACTTCAC+CGG - chr7_3:78682855-78682874 None:intergenic 40.0%
GGATTTAATGGAAGGGTTGA+AGG - chr7_3:78683128-78683147 None:intergenic 40.0%
!! TGTTCTAGAGAGAGAGAGAG+AGG - chr7_3:78679825-78679844 None:intergenic 45.0%
! ATGCTGTCTTCCGATTCGAT+CGG - chr7_3:78680176-78680195 None:intergenic 45.0%
TTTAGCCATATCACCGCGTT+TGG + chr7_3:78680391-78680410 Msa1127170:CDS 45.0%
TTGATCCAAACGCGGTGATA+TGG - chr7_3:78680399-78680418 None:intergenic 45.0%
TCAAGAGCTTGATCCAAACG+CGG - chr7_3:78680407-78680426 None:intergenic 45.0%
AAGCTCTTGAGCTTAGAGCT+AGG + chr7_3:78680417-78680436 Msa1127170:CDS 45.0%
GAAGAAGAAGAACCAGAGGA+AGG - chr7_3:78680527-78680546 None:intergenic 45.0%
GTTGTGAGAAAGAAGGGCAA+TGG + chr7_3:78680672-78680691 Msa1127170:CDS 45.0%
CTACAGCTAGTGAGGCTAAA+TGG + chr7_3:78680977-78680996 Msa1127170:intron 45.0%
GGAAATTCTTGGTTGTAGGG+TGG + chr7_3:78681174-78681193 Msa1127170:intron 45.0%
ATTCTTGAAGTGGCCAGAAG+AGG + chr7_3:78681332-78681351 Msa1127170:intron 45.0%
AGTGGCCAGAAGAGGTAATA+AGG + chr7_3:78681340-78681359 Msa1127170:intron 45.0%
GTGGCCAGAAGAGGTAATAA+GGG + chr7_3:78681341-78681360 Msa1127170:intron 45.0%
! ATGCTGCCATTTAGGACTGA+TGG + chr7_3:78681654-78681673 Msa1127170:CDS 45.0%
CATCCTCCATCAGTCCTAAA+TGG - chr7_3:78681663-78681682 None:intergenic 45.0%
GCAATGGTTCTTCTCCAAAC+AGG + chr7_3:78681682-78681701 Msa1127170:CDS 45.0%
TTGGGTCTAGTGAAAGAGTG+CGG - chr7_3:78682077-78682096 None:intergenic 45.0%
CAAGTGCTTGAATGCAGGTT+GGG - chr7_3:78682095-78682114 None:intergenic 45.0%
TCAAGTGCTTGAATGCAGGT+TGG - chr7_3:78682096-78682115 None:intergenic 45.0%
! GGTTTCAAGTGCTTGAATGC+AGG - chr7_3:78682100-78682119 None:intergenic 45.0%
! CATTGATTGGAGTTCGACGT+GGG + chr7_3:78682355-78682374 Msa1127170:CDS 45.0%
AGGAAGCTGCTGAGAAACAA+AGG + chr7_3:78682583-78682602 Msa1127170:CDS 45.0%
TTCTTGTACCGTGAATCCTG+CGG + chr7_3:78682752-78682771 Msa1127170:CDS 45.0%
TTGAAACACCGCAGGATTCA+CGG - chr7_3:78682763-78682782 None:intergenic 45.0%
TTCCTACCACTGCAAGATCA+CGG - chr7_3:78682797-78682816 None:intergenic 45.0%
GGCTATGTTGGAGATGTTAC+CGG + chr7_3:78682907-78682926 Msa1127170:three_prime_UTR 45.0%
! TTGGTGGCTCACAAACCGTA+AGG + chr7_3:78680049-78680068 Msa1127170:CDS 50.0%
GTTCCTTGCTCCGATCGAAT+CGG + chr7_3:78680163-78680182 Msa1127170:intron 50.0%
GCGAATGAAGATCCTTCCTC+TGG + chr7_3:78680512-78680531 Msa1127170:CDS 50.0%
GTGAGAAAGAAGGGCAATGG+AGG + chr7_3:78680675-78680694 Msa1127170:CDS 50.0%
TTAGCCTCACTAGCTGTAGC+TGG - chr7_3:78680976-78680995 None:intergenic 50.0%
! GGTGAAGCATGCTGCCATTT+AGG + chr7_3:78681646-78681665 Msa1127170:CDS 50.0%
! CTGCCATTTAGGACTGATGG+AGG + chr7_3:78681657-78681676 Msa1127170:CDS 50.0%
AGGACTGATGGAGGATGCAA+TGG + chr7_3:78681666-78681685 Msa1127170:CDS 50.0%
GAATTGCTAGCGCAGCATTC+CGG + chr7_3:78681710-78681729 Msa1127170:CDS 50.0%
!! TGTGGTGGGTTGTTGGTTTG+GGG - chr7_3:78681800-78681819 None:intergenic 50.0%
!! GTGTGGTGGGTTGTTGGTTT+GGG - chr7_3:78681801-78681820 None:intergenic 50.0%
GGAATTTGATGTGGCTGAGG+AGG - chr7_3:78681864-78681883 None:intergenic 50.0%
GGAGGAATTTGATGTGGCTG+AGG - chr7_3:78681867-78681886 None:intergenic 50.0%
TGCTCTGTGCATGTAGCACT+CGG - chr7_3:78682004-78682023 None:intergenic 50.0%
CTGCAATTCGACCAGCAGAA+CGG - chr7_3:78682035-78682054 None:intergenic 50.0%
AGTGCGGTTACAATCAGCGA+TGG - chr7_3:78682061-78682080 None:intergenic 50.0%
TGCTTCGAAGAGTGAAGCTC+TGG - chr7_3:78682121-78682140 None:intergenic 50.0%
ACATTGTGGCGTTTCCATGC+TGG - chr7_3:78682231-78682250 None:intergenic 50.0%
!! GCATTGATTGGAGTTCGACG+TGG + chr7_3:78682354-78682373 Msa1127170:CDS 50.0%
! TGGGTGTTCCCGTTCTGAAT+TGG + chr7_3:78682374-78682393 Msa1127170:CDS 50.0%
GTGAATCCTGCGGTGTTTCA+AGG + chr7_3:78682762-78682781 Msa1127170:CDS 50.0%
AACACACCTTGAAACACCGC+AGG - chr7_3:78682771-78682790 None:intergenic 50.0%
! GTTTTGCCGTGATCTTGCAG+TGG + chr7_3:78682788-78682807 Msa1127170:CDS 50.0%
GCTTCATACTTCACCGGCAT+TGG - chr7_3:78682849-78682868 None:intergenic 50.0%
ATTGGTGGGAAGGGCTATGT+TGG + chr7_3:78682895-78682914 Msa1127170:three_prime_UTR 50.0%
TTGGAGATGTTACCGGCAGA+GGG + chr7_3:78682914-78682933 Msa1127170:three_prime_UTR 50.0%
! CTTCCGATTCGATCGGAGCA+AGG - chr7_3:78680169-78680188 None:intergenic 55.0%
CATGCCAGCTACAGCTAGTG+AGG + chr7_3:78680969-78680988 Msa1127170:intron 55.0%
ACCAGCAGACACTCTCTCTC+CGG - chr7_3:78681732-78681751 None:intergenic 55.0%
! TTGGGGTGTCTCCAGCCAAT+GGG - chr7_3:78681783-78681802 None:intergenic 55.0%
! TTTGGGGTGTCTCCAGCCAA+TGG - chr7_3:78681784-78681803 None:intergenic 55.0%
!! GGTGTGGTGGGTTGTTGGTT+TGG - chr7_3:78681802-78681821 None:intergenic 55.0%
GGCGGAGGAGGAATTTGATG+TGG - chr7_3:78681873-78681892 None:intergenic 55.0%
! TGAGTAGAGACCAGCGTCGA+GGG - chr7_3:78681917-78681936 None:intergenic 55.0%
GTAAACTTCCCGGTCCAGCA+TGG + chr7_3:78682214-78682233 Msa1127170:CDS 55.0%
TGCCGTGATCTTGCAGTGGT+AGG + chr7_3:78682792-78682811 Msa1127170:CDS 55.0%
!! GGTAGGAAGCTTGTTGACGC+AGG + chr7_3:78682809-78682828 Msa1127170:CDS 55.0%
GTTGGAGATGTTACCGGCAG+AGG + chr7_3:78682913-78682932 Msa1127170:three_prime_UTR 55.0%
TTACCGGCAGAGGGAATCTC+TGG + chr7_3:78682923-78682942 Msa1127170:three_prime_UTR 55.0%
GAACCAGAGATTCCCTCTGC+CGG - chr7_3:78682929-78682948 None:intergenic 55.0%
!! TCCGGAGAGAGAGTGTCTGC+TGG + chr7_3:78681728-78681747 Msa1127170:CDS 60.0%
GTTTCGTTGAGAGGGGCTCG+TGG - chr7_3:78681826-78681845 None:intergenic 60.0%
CTGAGTAGAGACCAGCGTCG+AGG - chr7_3:78681918-78681937 None:intergenic 60.0%
! ACTCGGCGAGGAAGCCTTGT+GGG - chr7_3:78681987-78682006 None:intergenic 60.0%
TGTGCATGTAGCACTCGGCG+AGG - chr7_3:78681999-78682018 None:intergenic 60.0%
GCATCTGCACACCGTTCTGC+TGG + chr7_3:78682021-78682040 Msa1127170:CDS 60.0%
TGGCGTTTCCATGCTGGACC+GGG - chr7_3:78682225-78682244 None:intergenic 60.0%
GTGGCGTTTCCATGCTGGAC+CGG - chr7_3:78682226-78682245 None:intergenic 60.0%
!! GTGGCGGTGTGGTGGGTTGT+TGG - chr7_3:78681807-78681826 None:intergenic 65.0%
TCGTTGAGAGGGGCTCGTGG+CGG - chr7_3:78681823-78681842 None:intergenic 65.0%
CAGCGAGTGCAGCTGCACGA+CGG - chr7_3:78681894-78681913 None:intergenic 65.0%
! GGAAGCCTTGTGGGGCAGCA+CGG - chr7_3:78681978-78681997 None:intergenic 65.0%
! CTCGGCGAGGAAGCCTTGTG+GGG - chr7_3:78681986-78682005 None:intergenic 65.0%
CACTCGGCGAGGAAGCCTTG+TGG - chr7_3:78681988-78682007 None:intergenic 65.0%
CGAGTGCAGCTGCACGACGG+CGG - chr7_3:78681891-78681910 None:intergenic 70.0%
GGGGCTCGTGGCGGTGTGGT+GGG - chr7_3:78681814-78681833 None:intergenic 75.0%
AGGGGCTCGTGGCGGTGTGG+TGG - chr7_3:78681815-78681834 None:intergenic 75.0%
GAGAGGGGCTCGTGGCGGTG+TGG - chr7_3:78681818-78681837 None:intergenic 75.0%
CAGCTGCACGACGGCGGAGG+AGG - chr7_3:78681885-78681904 None:intergenic 75.0%
GTGCAGCTGCACGACGGCGG+AGG - chr7_3:78681888-78681907 None:intergenic 75.0%
GCACTCGCTGCCCTCGACGC+TGG + chr7_3:78681904-78681923 Msa1127170:CDS 75.0%
GGTCGCCGTGCTGCCCCACA+AGG + chr7_3:78681970-78681989 Msa1127170:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 78679758 78683227 78679758 ID=Msa1127170;Name=Msa1127170
chr7_3 mRNA 78679758 78683227 78679758 ID=Msa1127170-mRNA-1;Parent=Msa1127170;Name=Msa1127170-mRNA-1;_AED=0.02;_eAED=0.02;_QI=247|1|1|1|1|1|3|346|570
chr7_3 exon 78679758 78680070 78679758 ID=Msa1127170-mRNA-1:exon:22038;Parent=Msa1127170-mRNA-1
chr7_3 exon 78680299 78680696 78680299 ID=Msa1127170-mRNA-1:exon:22039;Parent=Msa1127170-mRNA-1
chr7_3 exon 78681633 78683227 78681633 ID=Msa1127170-mRNA-1:exon:22040;Parent=Msa1127170-mRNA-1
chr7_3 five_prime_UTR 78679758 78680004 78679758 ID=Msa1127170-mRNA-1:five_prime_utr;Parent=Msa1127170-mRNA-1
chr7_3 CDS 78680005 78680070 78680005 ID=Msa1127170-mRNA-1:cds;Parent=Msa1127170-mRNA-1
chr7_3 CDS 78680299 78680696 78680299 ID=Msa1127170-mRNA-1:cds;Parent=Msa1127170-mRNA-1
chr7_3 CDS 78681633 78682881 78681633 ID=Msa1127170-mRNA-1:cds;Parent=Msa1127170-mRNA-1
chr7_3 three_prime_UTR 78682882 78683227 78682882 ID=Msa1127170-mRNA-1:three_prime_utr;Parent=Msa1127170-mRNA-1
Gene Sequence

>Msa1127170

ATGGCGGTGACAACTCACTCTCTAACCGCTACAGAAAAGAAACATTGGTGGCTCACAAACCGTAAGATTGTGGAGAAATACATAAAAGACGCACGAAGCTTAATAGCAACACAAGAACAGAGCGAGATCCTTTCAGCTTTGAATCTTCTCGACGCAGCTTTAGCCATATCACCGCGTTTGGATCAAGCTCTTGAGCTTAGAGCTAGGTCATTGCTTTGCCTAAGAAGATTCAAAGATGTTGCCAATATGCTTCAAGATTACATTCCAAGTTTGAGAATGGCGAATGAAGATCCTTCCTCTGGTTCTTCTTCTTCTTCTGATAGTTCTTCTAGAGAAGGAGTGAAGCTTCTTTCATCTGATTCACCGGTTCGAGATCAGAGCTTTAAGTGCTTCTCTGTTTCTGATCTTAAGAAGAAGGTTATGGCAGGGCTTTGTAAAAGTTGTGAGAAAGAAGGGCAATGGAGATACTTGGTTTTGGGTGAAGCATGCTGCCATTTAGGACTGATGGAGGATGCAATGGTTCTTCTCCAAACAGGAAAAAGAATTGCTAGCGCAGCATTCCGGAGAGAGAGTGTCTGCTGGTCCGACGACAGTTTTCCTCTATTAACTATCCCATTGGCTGGAGACACCCCAAACCAACAACCCACCACACCGCCACGAGCCCCTCTCAACGAAACAGAAAGTGTAACACACCTCCTCAGCCACATCAAATTCCTCCTCCGCCGTCGTGCAGCTGCACTCGCTGCCCTCGACGCTGGTCTCTACTCAGAAGCCATTCGCCATTTCTCAAAAATAGTAGACGGTCGCCGTGCTGCCCCACAAGGCTTCCTCGCCGAGTGCTACATGCACAGAGCATCTGCACACCGTTCTGCTGGTCGAATTGCAGAGTCCATCGCTGATTGTAACCGCACTCTTTCACTAGACCCAACCTGCATTCAAGCACTTGAAACCAGAGCTTCACTCTTCGAAGCAATTCGTTGTTTACCTGATTCACTTCACGATTTAGAACATTTAAAGCTGCTCTACAACTCTATCTTACGTGATCGTAAACTTCCCGGTCCAGCATGGAAACGCCACAATGTAAGATACAGAGAGATTCCAGGAAAACTTTGTGCCTTAACCACTAAGATTCAAGAATTGAAACAAAGATTATCTTCTGGTGAAACCACTAGTGTTGATTACTATGCATTGATTGGAGTTCGACGTGGGTGTTCCCGTTCTGAATTGGAAAGAGCTCATTTGTTGCTATGTCTTCGCCATAAGCCAGATAAAGCTACAAATTTCATTGAAAGGTGTGAATTTGCGGATGAACGTGATATTGATACTGTTAAGGAGAAAGCAAAGATGTGTTCATTGTTGTTGTATAGATTGGTTCAGAAGGGTTACACAAGTGTGATGAGTAATGTTTTAGATGAGGAAGCTGCTGAGAAACAAAGGAAGAAGAATGTTGCTGCTGCAGCACAAGCACAAGCAGCAGCAATTCAAGTTCAAGTGAAGAAAACAAATGAAGCTGAGCTGAAAAATAACAAGGCTGAAAATAAGAGTAGTAATGTTTTTGTGGAAAATGACCAGCCTTTGATATCTTCTTGTACCGTGAATCCTGCGGTGTTTCAAGGTGTGTTTTGCCGTGATCTTGCAGTGGTAGGAAGCTTGTTGACGCAGGCACGATTTAATCGACCAATGCCGGTGAAGTATGAAGCATTGAGCTGCTAA
Protein sequence

>Msa1127170

MAVTTHSLTATEKKHWWLTNRKIVEKYIKDARSLIATQEQSEILSALNLLDAALAISPRLDQALELRARSLLCLRRFKDVANMLQDYIPSLRMANEDPSSGSSSSSDSSSREGVKLLSSDSPVRDQSFKCFSVSDLKKKVMAGLCKSCEKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRIASAAFRRESVCWSDDSFPLLTIPLAGDTPNQQPTTPPRAPLNETESVTHLLSHIKFLLRRRAAALAALDAGLYSEAIRHFSKIVDGRRAAPQGFLAECYMHRASAHRSAGRIAESIADCNRTLSLDPTCIQALETRASLFEAIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKQRLSSGETTSVDYYALIGVRRGCSRSELERAHLLLCLRHKPDKATNFIERCEFADERDIDTVKEKAKMCSLLLYRLVQKGYTSVMSNVLDEEAAEKQRKKNVAAAAQAQAAAIQVQVKKTNEAELKNNKAENKSSNVFVENDQPLISSCTVNPAVFQGVFCRDLAVVGSLLTQARFNRPMPVKYEALSC*