Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269260 | XP_003603670.1 | 100.000 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 0.0 | 939 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269260 | sp|P46259|TBA1_PEA | 98.894 | 452 | 4 | 1 | 1 | 451 | 1 | 452 | 0.0 | 926 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269260 | G7J421 | 100.000 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 0.0 | 939 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0242820 | Msa0269260 | 0.820901 | 5.367619e-53 | -8.615850e-47 |
| Msa0269260 | Msa0287660 | 0.814036 | 1.889963e-51 | -8.615850e-47 |
| Msa0269260 | Msa0377480 | 0.808375 | 3.194588e-50 | -8.615850e-47 |
| Msa0269260 | Msa0384060 | 0.968927 | 2.232019e-129 | -8.615850e-47 |
| Msa0269260 | Msa0426840 | 0.827268 | 1.718336e-54 | -8.615850e-47 |
| Msa0269260 | Msa0478340 | 0.962315 | 9.903807e-121 | -8.615850e-47 |
| Msa0269260 | Msa0522440 | 0.976243 | 1.871834e-141 | -8.615850e-47 |
| Msa0269260 | Msa0627580 | 0.810598 | 1.064573e-50 | -8.615850e-47 |
| Msa0269260 | Msa0629440 | 0.827757 | 1.311771e-54 | -8.615850e-47 |
| Msa0269260 | Msa0667070 | 0.856554 | 2.974108e-62 | -8.615850e-47 |
| Msa0269260 | Msa1041160 | 0.830111 | 3.530528e-55 | -8.615850e-47 |
| Msa0269260 | Msa1127170 | 0.826111 | 3.246062e-54 | -8.615850e-47 |
| Msa0269260 | Msa1141250 | 0.800638 | 1.312056e-48 | -8.615850e-47 |
| Msa0269260 | Msa1204600 | 0.841157 | 5.632516e-58 | -8.615850e-47 |
| Msa0269260 | Msa1204770 | 0.855233 | 7.238178e-62 | -8.615850e-47 |
| Msa0269260 | Msa1304320 | 0.846015 | 2.831743e-59 | -8.615850e-47 |
| Msa0269260 | Msa1329350 | 0.855854 | 4.770592e-62 | -8.615850e-47 |
| Msa0269260 | Msa1329420 | 0.815377 | 9.535667e-52 | -8.615850e-47 |
| Msa0269260 | Msa1329580 | 0.852203 | 5.386049e-61 | -8.615850e-47 |
| Msa0269260 | Msa1362000 | 0.833040 | 6.700174e-56 | -8.615850e-47 |
| Msa0269260 | Msa1412620 | 0.849052 | 4.142298e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269260 | MtrunA17_Chr3g0140821 | 100.000 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 0.0 | 939 |
| Msa0269260 | MtrunA17_Chr4g0054511 | 97.118 | 451 | 13 | 0 | 1 | 451 | 1 | 451 | 0.0 | 914 |
| Msa0269260 | MtrunA17_Chr1g0206881 | 97.550 | 449 | 11 | 0 | 1 | 449 | 1 | 449 | 0.0 | 914 |
| Msa0269260 | MtrunA17_Chr8g0378821 | 92.874 | 435 | 31 | 0 | 1 | 435 | 1 | 435 | 0.0 | 834 |
| Msa0269260 | MtrunA17_Chr7g0253411 | 91.403 | 442 | 38 | 0 | 1 | 442 | 1 | 442 | 0.0 | 829 |
| Msa0269260 | MtrunA17_Chr6g0461281 | 83.628 | 452 | 69 | 3 | 1 | 451 | 1 | 448 | 0.0 | 774 |
| Msa0269260 | MtrunA17_Chr2g0300491 | 73.719 | 449 | 113 | 2 | 1 | 449 | 1 | 444 | 0.0 | 661 |
| Msa0269260 | MtrunA17_Chr2g0300671 | 74.603 | 441 | 107 | 2 | 1 | 441 | 1 | 436 | 0.0 | 658 |
| Msa0269260 | MtrunA17_Chr4g0051631 | 42.166 | 434 | 241 | 2 | 1 | 434 | 1 | 424 | 8.52e-126 | 372 |
| Msa0269260 | MtrunA17_Chr8g0393021 | 41.372 | 452 | 254 | 3 | 1 | 450 | 1 | 443 | 8.80e-126 | 372 |
| Msa0269260 | MtrunA17_Chr4g0008401 | 42.396 | 434 | 240 | 2 | 1 | 434 | 1 | 424 | 1.40e-124 | 369 |
| Msa0269260 | MtrunA17_Chr4g0008361 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 1.94e-124 | 369 |
| Msa0269260 | MtrunA17_Chr1g0203181 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 4.76e-124 | 368 |
| Msa0269260 | MtrunA17_Chr2g0292921 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 5.15e-124 | 367 |
| Msa0269260 | MtrunA17_Chr7g0255791 | 41.876 | 437 | 238 | 4 | 1 | 434 | 1 | 424 | 1.12e-123 | 367 |
| Msa0269260 | MtrunA17_Chr4g0007371 | 41.514 | 436 | 243 | 3 | 1 | 434 | 1 | 426 | 4.59e-123 | 365 |
| Msa0269260 | MtrunA17_Chr3g0142731 | 40.503 | 437 | 246 | 3 | 1 | 434 | 1 | 426 | 4.59e-123 | 365 |
| Msa0269260 | MtrunA17_Chr8g0386781 | 39.545 | 440 | 256 | 2 | 1 | 440 | 1 | 430 | 3.32e-122 | 363 |
| Msa0269260 | MtrunA17_Chr3g0109241 | 97.101 | 138 | 4 | 0 | 268 | 405 | 1 | 138 | 2.95e-96 | 286 |
| Msa0269260 | MtrunA17_Chr7g0275431 | 31.614 | 446 | 282 | 9 | 2 | 433 | 3 | 439 | 1.01e-76 | 247 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269260 | AT4G14960.2 | 97.105 | 449 | 13 | 0 | 1 | 449 | 1 | 449 | 0.0 | 913 |
| Msa0269260 | AT1G50010.1 | 96.882 | 449 | 14 | 0 | 1 | 449 | 1 | 449 | 0.0 | 911 |
| Msa0269260 | AT1G04820.1 | 96.882 | 449 | 14 | 0 | 1 | 449 | 1 | 449 | 0.0 | 911 |
| Msa0269260 | AT5G19780.1 | 93.793 | 435 | 27 | 0 | 1 | 435 | 1 | 435 | 0.0 | 839 |
| Msa0269260 | AT5G19770.1 | 93.793 | 435 | 27 | 0 | 1 | 435 | 1 | 435 | 0.0 | 839 |
| Msa0269260 | AT1G64740.1 | 90.345 | 435 | 42 | 0 | 1 | 435 | 1 | 435 | 0.0 | 813 |
| Msa0269260 | AT4G14960.1 | 94.103 | 407 | 17 | 1 | 1 | 407 | 1 | 400 | 0.0 | 800 |
| Msa0269260 | AT1G75780.1 | 41.475 | 434 | 245 | 2 | 1 | 434 | 1 | 425 | 1.61e-126 | 374 |
| Msa0269260 | AT5G62690.1 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 3.91e-125 | 371 |
| Msa0269260 | AT5G62700.1 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 3.91e-125 | 371 |
| Msa0269260 | AT1G20010.1 | 41.475 | 434 | 245 | 2 | 1 | 434 | 1 | 425 | 1.17e-124 | 370 |
| Msa0269260 | AT2G29550.1 | 41.270 | 441 | 249 | 2 | 1 | 441 | 1 | 431 | 1.89e-124 | 369 |
| Msa0269260 | AT5G12250.1 | 41.876 | 437 | 238 | 4 | 1 | 434 | 1 | 424 | 2.42e-124 | 369 |
| Msa0269260 | AT4G20890.1 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 5.54e-124 | 368 |
| Msa0269260 | AT5G23860.2 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 7.82e-124 | 368 |
| Msa0269260 | AT5G23860.1 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 7.82e-124 | 368 |
| Msa0269260 | AT5G44340.1 | 41.705 | 434 | 243 | 3 | 1 | 434 | 1 | 424 | 5.16e-122 | 363 |
| Msa0269260 | AT5G05620.1 | 32.287 | 446 | 279 | 9 | 2 | 433 | 3 | 439 | 5.71e-78 | 250 |
| Msa0269260 | AT3G61650.1 | 31.839 | 446 | 281 | 9 | 2 | 433 | 3 | 439 | 1.15e-76 | 247 |
Find 190 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAACATTTCTTCAACTTT+AGG | 0.184754 | 2_2:-70700173 | Msa0269260:three_prime_UTR |
| CAAACATTTCTTCAACTTTA+GGG | 0.234030 | 2_2:-70700172 | Msa0269260:three_prime_UTR |
| GAGCGTTTATCTGTTGATTA+TGG | 0.257743 | 2_2:-70701946 | Msa0269260:CDS |
| TACCGGTCTGCAAGGTTTCT+TGG | 0.265637 | 2_2:-70702022 | Msa0269260:CDS |
| ACTGCCTCTTTGAGGTTTGA+TGG | 0.279194 | 2_2:-70701532 | Msa0269260:CDS |
| GAAATGATTTAAAACAATAT+TGG | 0.295619 | 2_2:-70700099 | Msa0269260:three_prime_UTR |
| AATGGTCCTCTTGGTCTTGA+TGG | 0.297222 | 2_2:+70701246 | None:intergenic |
| GTGAATCTCTCTTTCTTTGT+TGG | 0.305673 | 2_2:-70700752 | Msa0269260:three_prime_UTR |
| GGCGCGTGGAACATGCTTTC+CGG | 0.314398 | 2_2:+70702339 | None:intergenic |
| CATCCCTCACTGCCTCTTTG+AGG | 0.314555 | 2_2:-70701540 | Msa0269260:CDS |
| CAGCCTCCAACTGTTGTTCC+TGG | 0.314809 | 2_2:-70701175 | Msa0269260:CDS |
| TGGTGGAACCGGATCTGGTT+TGG | 0.315781 | 2_2:-70701983 | Msa0269260:CDS |
| GGTGGAACCGGATCTGGTTT+GGG | 0.317975 | 2_2:-70701982 | Msa0269260:CDS |
| TTTGTTGATTGGTGTCCAAC+TGG | 0.322748 | 2_2:-70701220 | Msa0269260:CDS |
| GAAACTAAATTTGAAATGTA+TGG | 0.336098 | 2_2:+70702813 | None:intergenic |
| TTGCCGCTGATGAGTTGTTC+AGG | 0.339225 | 2_2:+70702247 | None:intergenic |
| TACAGTTATCTGCTAGCTTT+CGG | 0.351362 | 2_2:+70702043 | None:intergenic |
| AACACGTTCTTCAGCGAAAC+CGG | 0.359208 | 2_2:-70702364 | Msa0269260:CDS |
| TTCATTGGTGCAGGATCGTT+TGG | 0.359828 | 2_2:-70700544 | Msa0269260:three_prime_UTR |
| TATTAGAAATTTAATCTTTG+TGG | 0.382619 | 2_2:-70700375 | Msa0269260:three_prime_UTR |
| CCTCAATCGCCTTGTCTCTC+AGG | 0.383066 | 2_2:-70701731 | Msa0269260:intron |
| TAAATTTGAAATGTATGGTT+AGG | 0.390192 | 2_2:+70702818 | None:intergenic |
| CTGCCTTGAACACGGCATTC+AGG | 0.391474 | 2_2:-70702560 | Msa0269260:intron |
| CGGTCTTGTCTCCAGGCATC+TGG | 0.396008 | 2_2:+70702410 | None:intergenic |
| TCTCCAGGCATCTGGCCATC+AGG | 0.405017 | 2_2:+70702418 | None:intergenic |
| TGGTTTGGGTTCTCTTCTGT+TGG | 0.405165 | 2_2:-70701968 | Msa0269260:CDS |
| GCCTTCTCAGCAGAGATAAC+AGG | 0.413340 | 2_2:+70701427 | None:intergenic |
| CAGCCTGATGGCCAGATGCC+TGG | 0.419485 | 2_2:-70702421 | Msa0269260:CDS |
| TCTTCTTCACAAAATTCAAA+AGG | 0.419881 | 2_2:-70702745 | Msa0269260:five_prime_UTR |
| CCTCCAACGGTCTTGTCTCC+AGG | 0.420149 | 2_2:+70702403 | None:intergenic |
| GTGGGTGGTGGAACCGGATC+TGG | 0.423776 | 2_2:-70701988 | Msa0269260:CDS |
| ATTAGAAATTTAATCTTTGT+GGG | 0.425010 | 2_2:-70700374 | Msa0269260:three_prime_UTR |
| TTACCTGAATGCCGTGTTCA+AGG | 0.426104 | 2_2:+70702557 | None:intergenic |
| GAGGAGGTTGGTGCTGAGTC+TGG | 0.430544 | 2_2:-70700950 | Msa0269260:CDS |
| TGAGGATTACTAGATCTTGT+AGG | 0.431148 | 2_2:-70700903 | Msa0269260:exon |
| GGACCATTCAGTTTGTTGAT+TGG | 0.433267 | 2_2:-70701231 | Msa0269260:CDS |
| TTCTTGGTGTTCAATGCTGT+GGG | 0.434584 | 2_2:-70702006 | Msa0269260:CDS |
| CGGCAACAGAAAGCTGTTCA+TGG | 0.435869 | 2_2:+70701401 | None:intergenic |
| TGGAACATGCTTTCCGGCAC+CGG | 0.438085 | 2_2:+70702345 | None:intergenic |
| TTACTATGTTTCATTGGTGC+AGG | 0.439459 | 2_2:-70700553 | Msa0269260:three_prime_UTR |
| AGATCATGCACACAGCCCTT+TGG | 0.440237 | 2_2:+70701134 | None:intergenic |
| GTGTTCAATGCTGTGGGTGG+TGG | 0.440766 | 2_2:-70702000 | Msa0269260:CDS |
| TGTTCATTACTATGTTTCAT+TGG | 0.442387 | 2_2:-70700559 | Msa0269260:three_prime_UTR |
| CAGTGTGCTCAAGGAGGGAA+TGG | 0.443924 | 2_2:+70701836 | None:intergenic |
| CTCCTCAACGGACATACATT+GGG | 0.446080 | 2_2:-70700322 | Msa0269260:three_prime_UTR |
| TTGGTATGTTGGTGAGGGTA+TGG | 0.447387 | 2_2:-70701029 | Msa0269260:CDS |
| GCGATTGAGGTTGGTGTAAG+TGG | 0.449517 | 2_2:+70701744 | None:intergenic |
| AATGCTGTGGGTGGTGGAAC+CGG | 0.451993 | 2_2:-70701994 | Msa0269260:CDS |
| ATCAAACTTATGATCAATCC+TGG | 0.453188 | 2_2:+70701081 | None:intergenic |
| GTGAAGAAGAATGGAAATGA+AGG | 0.453552 | 2_2:+70702758 | None:intergenic |
| GAAGAAAGAAGAAGAAGAAA+CGG | 0.457480 | 2_2:+70702691 | None:intergenic |
| GGTTGAAAGGACACTGTTGT+AGG | 0.458409 | 2_2:+70701858 | None:intergenic |
| ACGCGCCGTCTTCGTAGATC+TGG | 0.458537 | 2_2:-70702323 | Msa0269260:CDS |
| AACAAACTGAATGGTCCTCT+TGG | 0.460464 | 2_2:+70701237 | None:intergenic |
| CTTCTTCACAAAATTCAAAA+GGG | 0.461873 | 2_2:-70702744 | Msa0269260:five_prime_UTR |
| TCCAGGTCGGAAATGCCTGC+TGG | 0.462149 | 2_2:-70702591 | Msa0269260:CDS |
| TGCCGCTGATGAGTTGTTCA+GGG | 0.465671 | 2_2:+70702248 | None:intergenic |
| GGCATTTCCGACCTGGATAC+CGG | 0.466918 | 2_2:+70702597 | None:intergenic |
| AATGAACACTCAAGCAAAAC+CGG | 0.470043 | 2_2:+70700574 | None:intergenic |
| AAAAGCACTGTTGGTGATCT+CGG | 0.470781 | 2_2:+70701381 | None:intergenic |
| CCCAGCAGGCATTTCCGACC+TGG | 0.472516 | 2_2:+70702590 | None:intergenic |
| TATTGGATGTGGATTTCCAT+TGG | 0.475872 | 2_2:-70700681 | Msa0269260:three_prime_UTR |
| GAAAGCATGAAATGGATCCT+AGG | 0.478017 | 2_2:+70701460 | None:intergenic |
| CCTGAGAGACAAGGCGATTG+AGG | 0.482372 | 2_2:+70701731 | None:intergenic |
| ATGACCACGGGCGAAGTTGT+TGG | 0.484462 | 2_2:+70702213 | None:intergenic |
| GCACACAGCCCTTTGGACCT+TGG | 0.485066 | 2_2:+70701141 | None:intergenic |
| CATTGGTCAAGCCGGTATCC+AGG | 0.488348 | 2_2:-70702608 | Msa0269260:CDS |
| GTCATTGACGAAGTCAGAAC+GGG | 0.490437 | 2_2:-70702292 | Msa0269260:CDS |
| CGTACGAGGAAAGCATGAAA+TGG | 0.493705 | 2_2:+70701452 | None:intergenic |
| GGTGATGGAGATGATGTTGA+TGG | 0.495196 | 2_2:-70700929 | Msa0269260:CDS |
| GTGAAAATAGTTGCATGAGT+TGG | 0.495985 | 2_2:+70700645 | None:intergenic |
| GAGGTAGAAACCTGGGGAGA+TGG | 0.498412 | 2_2:+70701892 | None:intergenic |
| GTGCATTGGTATGTTGGTGA+GGG | 0.501347 | 2_2:-70701034 | Msa0269260:CDS |
| TTTCTTGGTGTTCAATGCTG+TGG | 0.502010 | 2_2:-70702007 | Msa0269260:CDS |
| TACCGTTTATCCATCTCCCC+AGG | 0.505210 | 2_2:-70701902 | Msa0269260:CDS |
| AAGAGAACCCAAACCAGATC+CGG | 0.505914 | 2_2:+70701975 | None:intergenic |
| CTGACTTCGTCAATGACGGT+TGG | 0.507214 | 2_2:+70702298 | None:intergenic |
| TGCTCTCGAGAAGGATTATG+AGG | 0.507547 | 2_2:-70700969 | Msa0269260:CDS |
| CGTTCTGACTTCGTCAATGA+CGG | 0.507560 | 2_2:+70702294 | None:intergenic |
| ACACAGACGTATCAACAGTC+TGG | 0.508138 | 2_2:+70700271 | None:intergenic |
| TTCTTCAGCGAAACCGGTGC+CGG | 0.513072 | 2_2:-70702358 | Msa0269260:CDS |
| CCCTCGCCATGGAAAATACA+TGG | 0.514501 | 2_2:-70701329 | Msa0269260:CDS |
| TGTATGGTTAGGAATTAACT+AGG | 0.520240 | 2_2:+70702829 | None:intergenic |
| CCAATGCACAAAAGCACGCT+TGG | 0.520245 | 2_2:+70701048 | None:intergenic |
| AGAAGAAGAAGAAACGGAAG+AGG | 0.523866 | 2_2:+70702697 | None:intergenic |
| AAGCTATCTATGACATATGC+AGG | 0.524385 | 2_2:-70701789 | Msa0269260:CDS |
| GTGACTCCTCAGCGGACTAA+AGG | 0.530618 | 2_2:-70700140 | Msa0269260:three_prime_UTR |
| AACCTGGGGAGATGGATAAA+CGG | 0.532949 | 2_2:+70701900 | None:intergenic |
| AGGGTCACACTTAGCCATCA+TGG | 0.532951 | 2_2:+70701348 | None:intergenic |
| AACAGAGTTTCAAACCAACT+TGG | 0.533094 | 2_2:-70701491 | Msa0269260:CDS |
| TCAACAATGACTTGAAAACT+AGG | 0.534125 | 2_2:-70700232 | Msa0269260:three_prime_UTR |
| CCTCAGCGGACTAAAGGAAC+CGG | 0.534632 | 2_2:-70700134 | Msa0269260:three_prime_UTR |
| CACTTAGCCATCATGGAAGA+AGG | 0.536043 | 2_2:+70701355 | None:intergenic |
| AGAAGGTTCAAAAGCACTGT+TGG | 0.538677 | 2_2:+70701372 | None:intergenic |
| CCGCGGTGATGTTGTGCCTA+AGG | 0.540342 | 2_2:-70701290 | Msa0269260:CDS |
| GTGATCTTGCCAAGGTCCAA+AGG | 0.540632 | 2_2:-70701150 | Msa0269260:CDS |
| TCTCCTCAACGGACATACAT+TGG | 0.543476 | 2_2:-70700323 | Msa0269260:three_prime_UTR |
| ATGAAATGGATCCTAGGGTA+AGG | 0.544980 | 2_2:+70701466 | None:intergenic |
| CCAGGTCGGAAATGCCTGCT+GGG | 0.545543 | 2_2:-70702590 | Msa0269260:CDS |
| GTTCAGGGTGGAAGAGTTGA+CGG | 0.545624 | 2_2:+70702263 | None:intergenic |
| GTTGGTGAGGGTATGGAAGA+AGG | 0.547203 | 2_2:-70701022 | Msa0269260:CDS |
| TCCTGGTGGTGATCTTGCCA+AGG | 0.548720 | 2_2:-70701158 | Msa0269260:CDS |
| CGTCATTGACGAAGTCAGAA+CGG | 0.550337 | 2_2:-70702293 | Msa0269260:CDS |
| TTGTTGATTGGTGTCCAACT+GGG | 0.551076 | 2_2:-70701219 | Msa0269260:CDS |
| TCAATCCACATTGGTCAAGC+CGG | 0.555162 | 2_2:-70702616 | Msa0269260:CDS |
| ATAAACGGTAAAACCCAACT+TGG | 0.555240 | 2_2:+70701915 | None:intergenic |
| TATAGTAAAGCCTAATGCTA+AGG | 0.555550 | 2_2:+70700623 | None:intergenic |
| GTTGGTGCTGAGTCTGGTGA+TGG | 0.556011 | 2_2:-70700944 | Msa0269260:CDS |
| CCACCAGGAACAACAGTTGG+AGG | 0.556528 | 2_2:+70701172 | None:intergenic |
| TGCATCATCTCCTCCTCCAA+CGG | 0.556914 | 2_2:+70702390 | None:intergenic |
| CAGGAACAACAGTTGGAGGC+TGG | 0.557000 | 2_2:+70701176 | None:intergenic |
| CCTGGAGACAAGACCGTTGG+AGG | 0.557403 | 2_2:-70702403 | Msa0269260:CDS |
| TCATTTCTATAGCAGTCTAC+CGG | 0.557875 | 2_2:+70700115 | None:intergenic |
| TAACTAGGGTTAGCTCACCT+TGG | 0.557921 | 2_2:+70702844 | None:intergenic |
| TGTGCATTGGTATGTTGGTG+AGG | 0.557980 | 2_2:-70701035 | Msa0269260:CDS |
| TCACCACCAGGAACAACAGT+TGG | 0.562091 | 2_2:+70701169 | None:intergenic |
| GGAGACAAGACCGTTGGAGG+AGG | 0.562701 | 2_2:-70702400 | Msa0269260:CDS |
| AAGAAGAAACGGAAGAGGAG+CGG | 0.563469 | 2_2:+70702702 | None:intergenic |
| CAGCAACATCAGTGTGCTCA+AGG | 0.564079 | 2_2:+70701827 | None:intergenic |
| CAAGGAGGGAATGGGTTGAA+AGG | 0.564699 | 2_2:+70701845 | None:intergenic |
| CACCAAGAAACCTTGCAGAC+CGG | 0.566087 | 2_2:+70702020 | None:intergenic |
| TATCAACAGTCTGGAGATTG+TGG | 0.566378 | 2_2:+70700280 | None:intergenic |
| TAACTCTACCAGTGTTGCTG+AGG | 0.566930 | 2_2:-70701110 | Msa0269260:CDS |
| TTTGTGTCCTTCAGTTGGGA+AGG | 0.568538 | 2_2:-70702094 | Msa0269260:intron |
| AAAGCATGAAATGGATCCTA+GGG | 0.569228 | 2_2:+70701461 | None:intergenic |
| ACACCAATCAACAAACTGAA+TGG | 0.571183 | 2_2:+70701228 | None:intergenic |
| ATACCGCACTTGAACCCAGT+TGG | 0.571477 | 2_2:+70701205 | None:intergenic |
| GTTGAAAGGACACTGTTGTA+GGG | 0.573119 | 2_2:+70701859 | None:intergenic |
| GGAAAACACCTCAGCAACAC+TGG | 0.575051 | 2_2:+70701102 | None:intergenic |
| AGAGACAAGGCGATTGAGGT+TGG | 0.575918 | 2_2:+70701735 | None:intergenic |
| ACCTGTTATCTCTGCTGAGA+AGG | 0.577342 | 2_2:-70701428 | Msa0269260:CDS |
| CAACAATGACTTGAAAACTA+GGG | 0.578361 | 2_2:-70700231 | Msa0269260:three_prime_UTR |
| AAACCTCAAAGAGGCAGTGA+GGG | 0.578416 | 2_2:+70701537 | None:intergenic |
| TGAGTTCTCTGAGGCTCGTG+AGG | 0.578430 | 2_2:-70700999 | Msa0269260:CDS |
| AACCACAGAGGTAGAAACCT+GGG | 0.579213 | 2_2:+70701885 | None:intergenic |
| ATGCCTGGAGACAAGACCGT+TGG | 0.583327 | 2_2:-70702406 | Msa0269260:CDS |
| ACCACGGGCGAAGTTGTTGG+CGG | 0.584023 | 2_2:+70702216 | None:intergenic |
| GAGAAGGATTATGAGGAGGT+TGG | 0.588091 | 2_2:-70700962 | Msa0269260:CDS |
| GAACTTTACTGCCTTGAACA+CGG | 0.589043 | 2_2:-70702568 | Msa0269260:CDS |
| TGATCTTGCCAAGGTCCAAA+GGG | 0.589383 | 2_2:-70701149 | Msa0269260:CDS |
| AACATCAGTGTGCTCAAGGA+GGG | 0.590528 | 2_2:+70701831 | None:intergenic |
| AGTGTGCTCAAGGAGGGAAT+GGG | 0.591430 | 2_2:+70701837 | None:intergenic |
| TCCCCAGGTTTCTACCTCTG+TGG | 0.593813 | 2_2:-70701887 | Msa0269260:CDS |
| CGATTGAGGTTGGTGTAAGT+GGG | 0.594949 | 2_2:+70701745 | None:intergenic |
| CCAACTTGGTTCCTTACCCT+AGG | 0.596446 | 2_2:-70701477 | Msa0269260:CDS |
| CAACCACAGAGGTAGAAACC+TGG | 0.597626 | 2_2:+70701884 | None:intergenic |
| GTATGGTTAGGAATTAACTA+GGG | 0.599143 | 2_2:+70702830 | None:intergenic |
| AGATCTACGAAGACGGCGCG+TGG | 0.600243 | 2_2:+70702325 | None:intergenic |
| AAGGCAGTAAAGTTCCCAGC+AGG | 0.601634 | 2_2:+70702576 | None:intergenic |
| GGGAAAATTTGAATGAACAA+AGG | 0.602244 | 2_2:+70702660 | None:intergenic |
| TTGTTGATCTATGCCTCGAT+AGG | 0.603776 | 2_2:-70702068 | Msa0269260:CDS |
| AAGCTAGCAGATAACTGTAC+CGG | 0.604721 | 2_2:-70702039 | Msa0269260:CDS |
| GACTTCTCTGTTCTCCTCAA+CGG | 0.605252 | 2_2:-70700334 | Msa0269260:three_prime_UTR |
| CCTCCAACTGTTGTTCCTGG+TGG | 0.605513 | 2_2:-70701172 | Msa0269260:CDS |
| TGGATAACACAATCTGCCAA+TGG | 0.606869 | 2_2:+70700665 | None:intergenic |
| TTGGTGTTCAATGCTGTGGG+TGG | 0.611760 | 2_2:-70702003 | Msa0269260:CDS |
| GAAGAATGGAAATGAAGGAG+AGG | 0.611891 | 2_2:+70702763 | None:intergenic |
| GCCGCCAACAACTTCGCCCG+TGG | 0.616675 | 2_2:-70702217 | Msa0269260:CDS |
| GATAACTGTACCGGTCTGCA+AGG | 0.617527 | 2_2:-70702030 | Msa0269260:CDS |
| CCGGTTCCTTTAGTCCGCTG+AGG | 0.619447 | 2_2:+70700134 | None:intergenic |
| AGATGATGTTGATGGAGATG+AGG | 0.621023 | 2_2:-70700921 | Msa0269260:CDS |
| GGATCTTGCTGCTCTCGAGA+AGG | 0.621052 | 2_2:-70700978 | Msa0269260:CDS |
| GCTAAGTGTGACCCTCGCCA+TGG | 0.621505 | 2_2:-70701340 | Msa0269260:CDS |
| ATCCCAATGTATGTCCGTTG+AGG | 0.628553 | 2_2:+70700320 | None:intergenic |
| AGAGATAACAGGTGCGTACG+AGG | 0.631288 | 2_2:+70701438 | None:intergenic |
| ACTGCAGCATTCACGTCCTT+AGG | 0.632837 | 2_2:+70701274 | None:intergenic |
| CCTAGGGTAAGGAACCAAGT+TGG | 0.636144 | 2_2:+70701477 | None:intergenic |
| CTAGCTTTCGGATCCTATCG+AGG | 0.641945 | 2_2:+70702055 | None:intergenic |
| TGCTCCATCAAACCTCAAAG+AGG | 0.642331 | 2_2:+70701528 | None:intergenic |
| CGTACTGGTATAATGACCAC+GGG | 0.644337 | 2_2:+70702201 | None:intergenic |
| GGTCAAGCCGGTATCCAGGT+CGG | 0.648566 | 2_2:-70702604 | Msa0269260:CDS |
| CACCCTGAACAACTCATCAG+CGG | 0.650288 | 2_2:-70702250 | Msa0269260:CDS |
| TGTCCAACTGGGTTCAAGTG+CGG | 0.653024 | 2_2:-70701208 | Msa0269260:CDS |
| CAACATCAGTGTGCTCAAGG+AGG | 0.655233 | 2_2:+70701830 | None:intergenic |
| TTGCAACCATCAAGACCAAG+AGG | 0.655579 | 2_2:-70701252 | Msa0269260:CDS |
| TGGTTCCAGATCTACGAAGA+CGG | 0.658526 | 2_2:+70702318 | None:intergenic |
| CGCTGATGAGTTGTTCAGGG+TGG | 0.660350 | 2_2:+70702251 | None:intergenic |
| CAAACCTCAAAGAGGCAGTG+AGG | 0.663855 | 2_2:+70701536 | None:intergenic |
| ACGTACTGGTATAATGACCA+CGG | 0.670676 | 2_2:+70702200 | None:intergenic |
| ACCTTGGCAAGATCACCACC+AGG | 0.672683 | 2_2:+70701157 | None:intergenic |
| GGATACCGGCTTGACCAATG+TGG | 0.673011 | 2_2:+70702611 | None:intergenic |
| GAGTGCATTTCAATCCACAT+TGG | 0.673256 | 2_2:-70702625 | Msa0269260:CDS |
| AAGTATATACCTGAGAGACA+AGG | 0.681840 | 2_2:+70701722 | None:intergenic |
| TCTCGAGAAGGATTATGAGG+AGG | 0.693923 | 2_2:-70700966 | Msa0269260:CDS |
| ACCACAGAGGTAGAAACCTG+GGG | 0.712460 | 2_2:+70701886 | None:intergenic |
| GCTTGTTGTTTGATGTACCG+CGG | 0.713100 | 2_2:-70701307 | Msa0269260:CDS |
| GGAAGAAGGTGAGTTCTCTG+AGG | 0.713464 | 2_2:-70701008 | Msa0269260:CDS |
| ATTTCAACGTGACTCCTCAG+CGG | 0.716336 | 2_2:-70700148 | Msa0269260:three_prime_UTR |
| GTTGTAGGGTTCAACCACAG+AGG | 0.742914 | 2_2:+70701873 | None:intergenic |
| CCTTAGGCACAACATCACCG+CGG | 0.844586 | 2_2:+70701290 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAGTTTTAAACTTTCAT+TGG | - | chr2_2:70702180-70702199 | Msa0269260:intron | 15.0% |
| !! | TTTCAAAAATTAGATAAAAC+CGG | - | chr2_2:70702305-70702324 | Msa0269260:CDS | 15.0% |
| !! | TATTAGAAATTTAATCTTTG+TGG | - | chr2_2:70702523-70702542 | Msa0269260:intron | 15.0% |
| !! | ATTAGAAATTTAATCTTTGT+GGG | - | chr2_2:70702524-70702543 | Msa0269260:intron | 15.0% |
| !!! | GAAATGATTTAAAACAATAT+TGG | - | chr2_2:70702799-70702818 | Msa0269260:five_prime_UTR | 15.0% |
| !!! | TAAATTTGAAATGTATGGTT+AGG | + | chr2_2:70700083-70700102 | None:intergenic | 20.0% |
| !!! | GAAACTAAATTTGAAATGTA+TGG | + | chr2_2:70700088-70700107 | None:intergenic | 20.0% |
| !!! | GAGATCTAGAATTAAAAAAA+TGG | + | chr2_2:70700387-70700406 | None:intergenic | 20.0% |
| !! | TAATTCTAGATCTCAAATTT+AGG | - | chr2_2:70700393-70700412 | Msa0269260:three_prime_UTR | 20.0% |
| !! | AATTCTAGATCTCAAATTTA+GGG | - | chr2_2:70700394-70700413 | Msa0269260:three_prime_UTR | 20.0% |
| !!! | CTTTAATCTACATTTTGTTT+CGG | - | chr2_2:70702124-70702143 | Msa0269260:intron | 20.0% |
| !! | TTGAATTTTGTGAAGAAGAA+TGG | + | chr2_2:70700152-70700171 | None:intergenic | 25.0% |
| ! | TCTTCTTCACAAAATTCAAA+AGG | - | chr2_2:70700153-70700172 | Msa0269260:three_prime_UTR | 25.0% |
| ! | CTTCTTCACAAAATTCAAAA+GGG | - | chr2_2:70700154-70700173 | Msa0269260:three_prime_UTR | 25.0% |
| ! | TTTCAATTGATTAATCGATG+CGG | - | chr2_2:70700444-70700463 | Msa0269260:three_prime_UTR | 25.0% |
| ! | TTATGGTAAAAAATCCAAGT+TGG | - | chr2_2:70700969-70700988 | Msa0269260:CDS | 25.0% |
| ! | TATGGTAAAAAATCCAAGTT+GGG | - | chr2_2:70700970-70700989 | Msa0269260:CDS | 25.0% |
| ! | TAACAACCAAATATAGAGAA+TGG | - | chr2_2:70701198-70701217 | Msa0269260:CDS | 25.0% |
| ! | GAATTATGTAGCAAATATTG+AGG | - | chr2_2:70701247-70701266 | Msa0269260:CDS | 25.0% |
| !!! | TGCTGTTTCATTTTAATTTC+TGG | - | chr2_2:70702040-70702059 | Msa0269260:CDS | 25.0% |
| !!! | GCTGTTTCATTTTAATTTCT+GGG | - | chr2_2:70702041-70702060 | Msa0269260:CDS | 25.0% |
| ! | TGTTCATTACTATGTTTCAT+TGG | - | chr2_2:70702339-70702358 | Msa0269260:CDS | 25.0% |
| !! | GCTTTTTAATGTTTTCTTTG+TGG | - | chr2_2:70702467-70702486 | Msa0269260:intron | 25.0% |
| ! | TCAAACATTTCTTCAACTTT+AGG | - | chr2_2:70702725-70702744 | Msa0269260:five_prime_UTR | 25.0% |
| ! | CAAACATTTCTTCAACTTTA+GGG | - | chr2_2:70702726-70702745 | Msa0269260:five_prime_UTR | 25.0% |
| GTATGGTTAGGAATTAACTA+GGG | + | chr2_2:70700071-70700090 | None:intergenic | 30.0% | |
| TGTATGGTTAGGAATTAACT+AGG | + | chr2_2:70700072-70700091 | None:intergenic | 30.0% | |
| GAAGAAAGAAGAAGAAGAAA+CGG | + | chr2_2:70700210-70700229 | None:intergenic | 30.0% | |
| GGGAAAATTTGAATGAACAA+AGG | + | chr2_2:70700241-70700260 | None:intergenic | 30.0% | |
| GGCATTCAGGTAATTAATTA+GGG | - | chr2_2:70700351-70700370 | Msa0269260:three_prime_UTR | 30.0% | |
| CAAGATCCATTCTCTATATT+TGG | + | chr2_2:70701207-70701226 | None:intergenic | 30.0% | |
| !!! | TTTGTTTGTTGTGCTTTTAC+AGG | - | chr2_2:70701329-70701348 | Msa0269260:CDS | 30.0% |
| ATCAAACTTATGATCAATCC+TGG | + | chr2_2:70701820-70701839 | None:intergenic | 30.0% | |
| ! | TGGATGAACGTTTTCTTTAT+TGG | - | chr2_2:70702200-70702219 | Msa0269260:intron | 30.0% |
| ! | AACGTTTTCTTTATTGGATG+TGG | - | chr2_2:70702206-70702225 | Msa0269260:CDS | 30.0% |
| ! | ACTATTTTCACCTTAGCATT+AGG | - | chr2_2:70702265-70702284 | Msa0269260:CDS | 30.0% |
| TATAGTAAAGCCTAATGCTA+AGG | + | chr2_2:70702278-70702297 | None:intergenic | 30.0% | |
| ! | AACTTCATATTTTGTGAGCA+AGG | - | chr2_2:70702495-70702514 | Msa0269260:intron | 30.0% |
| TCAACAATGACTTGAAAACT+AGG | - | chr2_2:70702666-70702685 | Msa0269260:five_prime_UTR | 30.0% | |
| CAACAATGACTTGAAAACTA+GGG | - | chr2_2:70702667-70702686 | Msa0269260:five_prime_UTR | 30.0% | |
| GTGAAGAAGAATGGAAATGA+AGG | + | chr2_2:70700143-70700162 | None:intergenic | 35.0% | |
| ! | AATGCACTCTCTCATTTTCT+CGG | + | chr2_2:70700262-70700281 | None:intergenic | 35.0% |
| CGGCATTCAGGTAATTAATT+AGG | - | chr2_2:70700350-70700369 | Msa0269260:three_prime_UTR | 35.0% | |
| ATTGAATGACGAAAACGTAC+TGG | + | chr2_2:70700715-70700734 | None:intergenic | 35.0% | |
| ! | TATGATTTGTGTCCTTCAGT+TGG | - | chr2_2:70700799-70700818 | Msa0269260:three_prime_UTR | 35.0% |
| ! | ATGATTTGTGTCCTTCAGTT+GGG | - | chr2_2:70700800-70700819 | Msa0269260:three_prime_UTR | 35.0% |
| !! | TACAGTTATCTGCTAGCTTT+CGG | + | chr2_2:70700858-70700877 | None:intergenic | 35.0% |
| ! | GAGCGTTTATCTGTTGATTA+TGG | - | chr2_2:70700952-70700971 | Msa0269260:CDS | 35.0% |
| ATAAACGGTAAAACCCAACT+TGG | + | chr2_2:70700986-70701005 | None:intergenic | 35.0% | |
| AAGCTATCTATGACATATGC+AGG | - | chr2_2:70701109-70701128 | Msa0269260:CDS | 35.0% | |
| AAGTATATACCTGAGAGACA+AGG | + | chr2_2:70701179-70701198 | None:intergenic | 35.0% | |
| GATCTTGAAATGTTTGCGTT+TGG | - | chr2_2:70701220-70701239 | Msa0269260:CDS | 35.0% | |
| AACAGAGTTTCAAACCAACT+TGG | - | chr2_2:70701407-70701426 | Msa0269260:CDS | 35.0% | |
| AAAGCATGAAATGGATCCTA+GGG | + | chr2_2:70701440-70701459 | None:intergenic | 35.0% | |
| ! | TTTTGAACCTTCTTCCATGA+TGG | - | chr2_2:70701536-70701555 | Msa0269260:CDS | 35.0% |
| ! | AACAAGCCATGTATTTTCCA+TGG | + | chr2_2:70701578-70701597 | None:intergenic | 35.0% |
| ACACCAATCAACAAACTGAA+TGG | + | chr2_2:70701673-70701692 | None:intergenic | 35.0% | |
| TGAGGATTACTAGATCTTGT+AGG | - | chr2_2:70701995-70702014 | Msa0269260:CDS | 35.0% | |
| GTGAATCTCTCTTTCTTTGT+TGG | - | chr2_2:70702146-70702165 | Msa0269260:intron | 35.0% | |
| TATTGGATGTGGATTTCCAT+TGG | - | chr2_2:70702217-70702236 | Msa0269260:CDS | 35.0% | |
| GTGAAAATAGTTGCATGAGT+TGG | + | chr2_2:70702256-70702275 | None:intergenic | 35.0% | |
| AATGAACACTCAAGCAAAAC+CGG | + | chr2_2:70702327-70702346 | None:intergenic | 35.0% | |
| TTACTATGTTTCATTGGTGC+AGG | - | chr2_2:70702345-70702364 | Msa0269260:CDS | 35.0% | |
| TCATTTCTATAGCAGTCTAC+CGG | + | chr2_2:70702786-70702805 | None:intergenic | 35.0% | |
| GAAGAATGGAAATGAAGGAG+AGG | + | chr2_2:70700138-70700157 | None:intergenic | 40.0% | |
| AGAAGAAGAAGAAACGGAAG+AGG | + | chr2_2:70700204-70700223 | None:intergenic | 40.0% | |
| ! | ATGCACTCTCTCATTTTCTC+GGG | + | chr2_2:70700261-70700280 | None:intergenic | 40.0% |
| GAGTGCATTTCAATCCACAT+TGG | - | chr2_2:70700273-70700292 | Msa0269260:three_prime_UTR | 40.0% | |
| GAACTTTACTGCCTTGAACA+CGG | - | chr2_2:70700330-70700349 | Msa0269260:three_prime_UTR | 40.0% | |
| ! | ACGTACTGGTATAATGACCA+CGG | + | chr2_2:70700701-70700720 | None:intergenic | 40.0% |
| TTGTTGATCTATGCCTCGAT+AGG | - | chr2_2:70700830-70700849 | Msa0269260:three_prime_UTR | 40.0% | |
| AAGCTAGCAGATAACTGTAC+CGG | - | chr2_2:70700859-70700878 | Msa0269260:three_prime_UTR | 40.0% | |
| !! | TTTCTTGGTGTTCAATGCTG+TGG | - | chr2_2:70700891-70700910 | Msa0269260:three_prime_UTR | 40.0% |
| !! | TTCTTGGTGTTCAATGCTGT+GGG | - | chr2_2:70700892-70700911 | Msa0269260:three_prime_UTR | 40.0% |
| GTTGAAAGGACACTGTTGTA+GGG | + | chr2_2:70701042-70701061 | None:intergenic | 40.0% | |
| ATGAAATGGATCCTAGGGTA+AGG | + | chr2_2:70701435-70701454 | None:intergenic | 40.0% | |
| ! | GAAAGCATGAAATGGATCCT+AGG | + | chr2_2:70701441-70701460 | None:intergenic | 40.0% |
| !! | AAAAGCACTGTTGGTGATCT+CGG | + | chr2_2:70701520-70701539 | None:intergenic | 40.0% |
| !! | AGAAGGTTCAAAAGCACTGT+TGG | + | chr2_2:70701529-70701548 | None:intergenic | 40.0% |
| AACAAACTGAATGGTCCTCT+TGG | + | chr2_2:70701664-70701683 | None:intergenic | 40.0% | |
| !! | GGACCATTCAGTTTGTTGAT+TGG | - | chr2_2:70701667-70701686 | Msa0269260:intron | 40.0% |
| ! | TTTGTTGATTGGTGTCCAAC+TGG | - | chr2_2:70701678-70701697 | Msa0269260:intron | 40.0% |
| ! | TTGTTGATTGGTGTCCAACT+GGG | - | chr2_2:70701679-70701698 | Msa0269260:intron | 40.0% |
| !! | GCTTTTGTGCATTGGTATGT+TGG | - | chr2_2:70701858-70701877 | Msa0269260:CDS | 40.0% |
| ! | AGATGATGTTGATGGAGATG+AGG | - | chr2_2:70701977-70701996 | Msa0269260:CDS | 40.0% |
| TGGATAACACAATCTGCCAA+TGG | + | chr2_2:70702236-70702255 | None:intergenic | 40.0% | |
| ! | GGACATACATTGGGATTTTC+TGG | - | chr2_2:70702585-70702604 | Msa0269260:CDS | 40.0% |
| TATCAACAGTCTGGAGATTG+TGG | + | chr2_2:70702621-70702640 | None:intergenic | 40.0% | |
| !! | TAACTAGGGTTAGCTCACCT+TGG | + | chr2_2:70700057-70700076 | None:intergenic | 45.0% |
| AAGAAGAAACGGAAGAGGAG+CGG | + | chr2_2:70700199-70700218 | None:intergenic | 45.0% | |
| TCAATCCACATTGGTCAAGC+CGG | - | chr2_2:70700282-70700301 | Msa0269260:three_prime_UTR | 45.0% | |
| TTACCTGAATGCCGTGTTCA+AGG | + | chr2_2:70700344-70700363 | None:intergenic | 45.0% | |
| !!! | GGTGTTGTTTTTCAGCCTGA+TGG | - | chr2_2:70700465-70700484 | Msa0269260:three_prime_UTR | 45.0% |
| AACACGTTCTTCAGCGAAAC+CGG | - | chr2_2:70700534-70700553 | Msa0269260:three_prime_UTR | 45.0% | |
| TGGTTCCAGATCTACGAAGA+CGG | + | chr2_2:70700583-70700602 | None:intergenic | 45.0% | |
| CGTTCTGACTTCGTCAATGA+CGG | + | chr2_2:70700607-70700626 | None:intergenic | 45.0% | |
| CGTCATTGACGAAGTCAGAA+CGG | - | chr2_2:70700605-70700624 | Msa0269260:three_prime_UTR | 45.0% | |
| GTCATTGACGAAGTCAGAAC+GGG | - | chr2_2:70700606-70700625 | Msa0269260:three_prime_UTR | 45.0% | |
| ! | CGTACTGGTATAATGACCAC+GGG | + | chr2_2:70700700-70700719 | None:intergenic | 45.0% |
| TTTGTGTCCTTCAGTTGGGA+AGG | - | chr2_2:70700804-70700823 | Msa0269260:three_prime_UTR | 45.0% | |
| ACAATCTCCTTCCCAACTGA+AGG | + | chr2_2:70700814-70700833 | None:intergenic | 45.0% | |
| AAGAGAACCCAAACCAGATC+CGG | + | chr2_2:70700926-70700945 | None:intergenic | 45.0% | |
| ! | TGGTTTGGGTTCTCTTCTGT+TGG | - | chr2_2:70700930-70700949 | Msa0269260:CDS | 45.0% |
| AACCTGGGGAGATGGATAAA+CGG | + | chr2_2:70701001-70701020 | None:intergenic | 45.0% | |
| AACCACAGAGGTAGAAACCT+GGG | + | chr2_2:70701016-70701035 | None:intergenic | 45.0% | |
| GGTTGAAAGGACACTGTTGT+AGG | + | chr2_2:70701043-70701062 | None:intergenic | 45.0% | |
| AACATCAGTGTGCTCAAGGA+GGG | + | chr2_2:70701070-70701089 | None:intergenic | 45.0% | |
| !! | CGATTGAGGTTGGTGTAAGT+GGG | + | chr2_2:70701156-70701175 | None:intergenic | 45.0% |
| AAACCTCAAAGAGGCAGTGA+GGG | + | chr2_2:70701364-70701383 | None:intergenic | 45.0% | |
| !! | ACTGCCTCTTTGAGGTTTGA+TGG | - | chr2_2:70701366-70701385 | Msa0269260:CDS | 45.0% |
| TGCTCCATCAAACCTCAAAG+AGG | + | chr2_2:70701373-70701392 | None:intergenic | 45.0% | |
| ! | CGTACGAGGAAAGCATGAAA+TGG | + | chr2_2:70701449-70701468 | None:intergenic | 45.0% |
| ACCTGTTATCTCTGCTGAGA+AGG | - | chr2_2:70701470-70701489 | Msa0269260:CDS | 45.0% | |
| CACTTAGCCATCATGGAAGA+AGG | + | chr2_2:70701546-70701565 | None:intergenic | 45.0% | |
| ! | CCATGTATTTTCCATGGCGA+GGG | + | chr2_2:70701572-70701591 | None:intergenic | 45.0% |
| !! | GCTTGTTGTTTGATGTACCG+CGG | - | chr2_2:70701591-70701610 | Msa0269260:intron | 45.0% |
| TTGCAACCATCAAGACCAAG+AGG | - | chr2_2:70701646-70701665 | Msa0269260:intron | 45.0% | |
| !! | AATGGTCCTCTTGGTCTTGA+TGG | + | chr2_2:70701655-70701674 | None:intergenic | 45.0% |
| TGATCTTGCCAAGGTCCAAA+GGG | - | chr2_2:70701749-70701768 | Msa0269260:CDS | 45.0% | |
| ! | TAACTCTACCAGTGTTGCTG+AGG | - | chr2_2:70701788-70701807 | Msa0269260:CDS | 45.0% |
| ! | TGTGCATTGGTATGTTGGTG+AGG | - | chr2_2:70701863-70701882 | Msa0269260:CDS | 45.0% |
| ! | GTGCATTGGTATGTTGGTGA+GGG | - | chr2_2:70701864-70701883 | Msa0269260:CDS | 45.0% |
| ! | TTGGTATGTTGGTGAGGGTA+TGG | - | chr2_2:70701869-70701888 | Msa0269260:CDS | 45.0% |
| TGCTCTCGAGAAGGATTATG+AGG | - | chr2_2:70701929-70701948 | Msa0269260:CDS | 45.0% | |
| TCTCGAGAAGGATTATGAGG+AGG | - | chr2_2:70701932-70701951 | Msa0269260:CDS | 45.0% | |
| GAGAAGGATTATGAGGAGGT+TGG | - | chr2_2:70701936-70701955 | Msa0269260:CDS | 45.0% | |
| !! | GGTGATGGAGATGATGTTGA+TGG | - | chr2_2:70701969-70701988 | Msa0269260:CDS | 45.0% |
| TTCATTGGTGCAGGATCGTT+TGG | - | chr2_2:70702354-70702373 | Msa0269260:CDS | 45.0% | |
| GACTTCTCTGTTCTCCTCAA+CGG | - | chr2_2:70702564-70702583 | Msa0269260:CDS | 45.0% | |
| TCTCCTCAACGGACATACAT+TGG | - | chr2_2:70702575-70702594 | Msa0269260:CDS | 45.0% | |
| CTCCTCAACGGACATACATT+GGG | - | chr2_2:70702576-70702595 | Msa0269260:CDS | 45.0% | |
| ATCCCAATGTATGTCCGTTG+AGG | + | chr2_2:70702581-70702600 | None:intergenic | 45.0% | |
| ACACAGACGTATCAACAGTC+TGG | + | chr2_2:70702630-70702649 | None:intergenic | 45.0% | |
| ATTTCAACGTGACTCCTCAG+CGG | - | chr2_2:70702750-70702769 | Msa0269260:five_prime_UTR | 45.0% | |
| AAGGCAGTAAAGTTCCCAGC+AGG | + | chr2_2:70700325-70700344 | None:intergenic | 50.0% | |
| TGCATCATCTCCTCCTCCAA+CGG | + | chr2_2:70700511-70700530 | None:intergenic | 50.0% | |
| CTGACTTCGTCAATGACGGT+TGG | + | chr2_2:70700603-70700622 | None:intergenic | 50.0% | |
| GTTCAGGGTGGAAGAGTTGA+CGG | + | chr2_2:70700638-70700657 | None:intergenic | 50.0% | |
| CACCCTGAACAACTCATCAG+CGG | - | chr2_2:70700648-70700667 | Msa0269260:three_prime_UTR | 50.0% | |
| TGCCGCTGATGAGTTGTTCA+GGG | + | chr2_2:70700653-70700672 | None:intergenic | 50.0% | |
| TTGCCGCTGATGAGTTGTTC+AGG | + | chr2_2:70700654-70700673 | None:intergenic | 50.0% | |
| ! | CTAGCTTTCGGATCCTATCG+AGG | + | chr2_2:70700846-70700865 | None:intergenic | 50.0% |
| ! | GATAACTGTACCGGTCTGCA+AGG | - | chr2_2:70700868-70700887 | Msa0269260:three_prime_UTR | 50.0% |
| TACCGGTCTGCAAGGTTTCT+TGG | - | chr2_2:70700876-70700895 | Msa0269260:three_prime_UTR | 50.0% | |
| CACCAAGAAACCTTGCAGAC+CGG | + | chr2_2:70700881-70700900 | None:intergenic | 50.0% | |
| ! | TTGGTGTTCAATGCTGTGGG+TGG | - | chr2_2:70700895-70700914 | Msa0269260:exon | 50.0% |
| TACCGTTTATCCATCTCCCC+AGG | - | chr2_2:70700996-70701015 | Msa0269260:CDS | 50.0% | |
| ACCACAGAGGTAGAAACCTG+GGG | + | chr2_2:70701015-70701034 | None:intergenic | 50.0% | |
| CAACCACAGAGGTAGAAACC+TGG | + | chr2_2:70701017-70701036 | None:intergenic | 50.0% | |
| GTTGTAGGGTTCAACCACAG+AGG | + | chr2_2:70701028-70701047 | None:intergenic | 50.0% | |
| !! | CAAGGAGGGAATGGGTTGAA+AGG | + | chr2_2:70701056-70701075 | None:intergenic | 50.0% |
| AGTGTGCTCAAGGAGGGAAT+GGG | + | chr2_2:70701064-70701083 | None:intergenic | 50.0% | |
| CAACATCAGTGTGCTCAAGG+AGG | + | chr2_2:70701071-70701090 | None:intergenic | 50.0% | |
| CAGCAACATCAGTGTGCTCA+AGG | + | chr2_2:70701074-70701093 | None:intergenic | 50.0% | |
| !! | GCGATTGAGGTTGGTGTAAG+TGG | + | chr2_2:70701157-70701176 | None:intergenic | 50.0% |
| AGAGACAAGGCGATTGAGGT+TGG | + | chr2_2:70701166-70701185 | None:intergenic | 50.0% | |
| CAAACCTCAAAGAGGCAGTG+AGG | + | chr2_2:70701365-70701384 | None:intergenic | 50.0% | |
| CCTAGGGTAAGGAACCAAGT+TGG | + | chr2_2:70701424-70701443 | None:intergenic | 50.0% | |
| CCAACTTGGTTCCTTACCCT+AGG | - | chr2_2:70701421-70701440 | Msa0269260:CDS | 50.0% | |
| AGAGATAACAGGTGCGTACG+AGG | + | chr2_2:70701463-70701482 | None:intergenic | 50.0% | |
| GCCTTCTCAGCAGAGATAAC+AGG | + | chr2_2:70701474-70701493 | None:intergenic | 50.0% | |
| CGGCAACAGAAAGCTGTTCA+TGG | + | chr2_2:70701500-70701519 | None:intergenic | 50.0% | |
| AGGGTCACACTTAGCCATCA+TGG | + | chr2_2:70701553-70701572 | None:intergenic | 50.0% | |
| CCCTCGCCATGGAAAATACA+TGG | - | chr2_2:70701569-70701588 | Msa0269260:intron | 50.0% | |
| ! | GCCATGTATTTTCCATGGCG+AGG | + | chr2_2:70701573-70701592 | None:intergenic | 50.0% |
| ACTGCAGCATTCACGTCCTT+AGG | + | chr2_2:70701627-70701646 | None:intergenic | 50.0% | |
| TGTCCAACTGGGTTCAAGTG+CGG | - | chr2_2:70701690-70701709 | Msa0269260:intron | 50.0% | |
| ATACCGCACTTGAACCCAGT+TGG | + | chr2_2:70701696-70701715 | None:intergenic | 50.0% | |
| TCACCACCAGGAACAACAGT+TGG | + | chr2_2:70701732-70701751 | None:intergenic | 50.0% | |
| GTGATCTTGCCAAGGTCCAA+AGG | - | chr2_2:70701748-70701767 | Msa0269260:CDS | 50.0% | |
| AGATCATGCACACAGCCCTT+TGG | + | chr2_2:70701767-70701786 | None:intergenic | 50.0% | |
| GGAAAACACCTCAGCAACAC+TGG | + | chr2_2:70701799-70701818 | None:intergenic | 50.0% | |
| !! | GTGTTGCTGAGGTGTTTTCC+AGG | - | chr2_2:70701799-70701818 | Msa0269260:CDS | 50.0% |
| ! | CCAATGCACAAAAGCACGCT+TGG | + | chr2_2:70701853-70701872 | None:intergenic | 50.0% |
| ! | CCAAGCGTGCTTTTGTGCAT+TGG | - | chr2_2:70701850-70701869 | Msa0269260:CDS | 50.0% |
| ! | GTTGGTGAGGGTATGGAAGA+AGG | - | chr2_2:70701876-70701895 | Msa0269260:CDS | 50.0% |
| GGAAGAAGGTGAGTTCTCTG+AGG | - | chr2_2:70701890-70701909 | Msa0269260:CDS | 50.0% | |
| !! | GGATACCGGCTTGACCAATG+TGG | + | chr2_2:70700290-70700309 | None:intergenic | 55.0% |
| CATTGGTCAAGCCGGTATCC+AGG | - | chr2_2:70700290-70700309 | Msa0269260:three_prime_UTR | 55.0% | |
| GGCATTTCCGACCTGGATAC+CGG | + | chr2_2:70700304-70700323 | None:intergenic | 55.0% | |
| CTGCCTTGAACACGGCATTC+AGG | - | chr2_2:70700338-70700357 | Msa0269260:three_prime_UTR | 55.0% | |
| ATGCCTGGAGACAAGACCGT+TGG | - | chr2_2:70700492-70700511 | Msa0269260:three_prime_UTR | 55.0% | |
| TTCTTCAGCGAAACCGGTGC+CGG | - | chr2_2:70700540-70700559 | Msa0269260:three_prime_UTR | 55.0% | |
| TGGAACATGCTTTCCGGCAC+CGG | + | chr2_2:70700556-70700575 | None:intergenic | 55.0% | |
| CGCTGATGAGTTGTTCAGGG+TGG | + | chr2_2:70700650-70700669 | None:intergenic | 55.0% | |
| ATGACCACGGGCGAAGTTGT+TGG | + | chr2_2:70700688-70700707 | None:intergenic | 55.0% | |
| GTGTTCAATGCTGTGGGTGG+TGG | - | chr2_2:70700898-70700917 | Msa0269260:exon | 55.0% | |
| !! | AATGCTGTGGGTGGTGGAAC+CGG | - | chr2_2:70700904-70700923 | Msa0269260:exon | 55.0% |
| TGGTGGAACCGGATCTGGTT+TGG | - | chr2_2:70700915-70700934 | Msa0269260:CDS | 55.0% | |
| ! | GGTGGAACCGGATCTGGTTT+GGG | - | chr2_2:70700916-70700935 | Msa0269260:CDS | 55.0% |
| GAGGTAGAAACCTGGGGAGA+TGG | + | chr2_2:70701009-70701028 | None:intergenic | 55.0% | |
| TCCCCAGGTTTCTACCTCTG+TGG | - | chr2_2:70701011-70701030 | Msa0269260:CDS | 55.0% | |
| CAGTGTGCTCAAGGAGGGAA+TGG | + | chr2_2:70701065-70701084 | None:intergenic | 55.0% | |
| CCTGAGAGACAAGGCGATTG+AGG | + | chr2_2:70701170-70701189 | None:intergenic | 55.0% | |
| CCTCAATCGCCTTGTCTCTC+AGG | - | chr2_2:70701167-70701186 | Msa0269260:CDS | 55.0% | |
| CATCCCTCACTGCCTCTTTG+AGG | - | chr2_2:70701358-70701377 | Msa0269260:CDS | 55.0% | |
| CCTTAGGCACAACATCACCG+CGG | + | chr2_2:70701611-70701630 | None:intergenic | 55.0% | |
| CAGGAACAACAGTTGGAGGC+TGG | + | chr2_2:70701725-70701744 | None:intergenic | 55.0% | |
| CAGCCTCCAACTGTTGTTCC+TGG | - | chr2_2:70701723-70701742 | Msa0269260:intron | 55.0% | |
| CCACCAGGAACAACAGTTGG+AGG | + | chr2_2:70701729-70701748 | None:intergenic | 55.0% | |
| CCTCCAACTGTTGTTCCTGG+TGG | - | chr2_2:70701726-70701745 | Msa0269260:intron | 55.0% | |
| ! | TCCTGGTGGTGATCTTGCCA+AGG | - | chr2_2:70701740-70701759 | Msa0269260:CDS | 55.0% |
| ACCTTGGCAAGATCACCACC+AGG | + | chr2_2:70701744-70701763 | None:intergenic | 55.0% | |
| !! | TGAGTTCTCTGAGGCTCGTG+AGG | - | chr2_2:70701899-70701918 | Msa0269260:CDS | 55.0% |
| GGATCTTGCTGCTCTCGAGA+AGG | - | chr2_2:70701920-70701939 | Msa0269260:CDS | 55.0% | |
| !! | GTTGGTGCTGAGTCTGGTGA+TGG | - | chr2_2:70701954-70701973 | Msa0269260:CDS | 55.0% |
| !! | GTGACTCCTCAGCGGACTAA+AGG | - | chr2_2:70702758-70702777 | Msa0269260:five_prime_UTR | 55.0% |
| !! | CCTCAGCGGACTAAAGGAAC+CGG | - | chr2_2:70702764-70702783 | Msa0269260:five_prime_UTR | 55.0% |
| GGTCAAGCCGGTATCCAGGT+CGG | - | chr2_2:70700294-70700313 | Msa0269260:three_prime_UTR | 60.0% | |
| TCCAGGTCGGAAATGCCTGC+TGG | - | chr2_2:70700307-70700326 | Msa0269260:three_prime_UTR | 60.0% | |
| CCAGGTCGGAAATGCCTGCT+GGG | - | chr2_2:70700308-70700327 | Msa0269260:three_prime_UTR | 60.0% | |
| TCTCCAGGCATCTGGCCATC+AGG | + | chr2_2:70700483-70700502 | None:intergenic | 60.0% | |
| ! | CGGTCTTGTCTCCAGGCATC+TGG | + | chr2_2:70700491-70700510 | None:intergenic | 60.0% |
| ! | CCTCCAACGGTCTTGTCTCC+AGG | + | chr2_2:70700498-70700517 | None:intergenic | 60.0% |
| CCTGGAGACAAGACCGTTGG+AGG | - | chr2_2:70700495-70700514 | Msa0269260:three_prime_UTR | 60.0% | |
| GGAGACAAGACCGTTGGAGG+AGG | - | chr2_2:70700498-70700517 | Msa0269260:three_prime_UTR | 60.0% | |
| GGCGCGTGGAACATGCTTTC+CGG | + | chr2_2:70700562-70700581 | None:intergenic | 60.0% | |
| AGATCTACGAAGACGGCGCG+TGG | + | chr2_2:70700576-70700595 | None:intergenic | 60.0% | |
| ACGCGCCGTCTTCGTAGATC+TGG | - | chr2_2:70700575-70700594 | Msa0269260:three_prime_UTR | 60.0% | |
| ACCACGGGCGAAGTTGTTGG+CGG | + | chr2_2:70700685-70700704 | None:intergenic | 60.0% | |
| GCTAAGTGTGACCCTCGCCA+TGG | - | chr2_2:70701558-70701577 | Msa0269260:intron | 60.0% | |
| CCGCGGTGATGTTGTGCCTA+AGG | - | chr2_2:70701608-70701627 | Msa0269260:intron | 60.0% | |
| GCACACAGCCCTTTGGACCT+TGG | + | chr2_2:70701760-70701779 | None:intergenic | 60.0% | |
| !! | GAGGAGGTTGGTGCTGAGTC+TGG | - | chr2_2:70701948-70701967 | Msa0269260:CDS | 60.0% |
| CCGGTTCCTTTAGTCCGCTG+AGG | + | chr2_2:70702767-70702786 | None:intergenic | 60.0% | |
| CCCAGCAGGCATTTCCGACC+TGG | + | chr2_2:70700311-70700330 | None:intergenic | 65.0% | |
| CAGCCTGATGGCCAGATGCC+TGG | - | chr2_2:70700477-70700496 | Msa0269260:three_prime_UTR | 65.0% | |
| !! | GTGGGTGGTGGAACCGGATC+TGG | - | chr2_2:70700910-70700929 | Msa0269260:exon | 65.0% |
| GCCGCCAACAACTTCGCCCG+TGG | - | chr2_2:70700681-70700700 | Msa0269260:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 70700054 | 70702866 | 70700054 | ID=Msa0269260;Name=Msa0269260 |
| chr2_2 | mRNA | 70700054 | 70702866 | 70700054 | ID=Msa0269260-mRNA-1;Parent=Msa0269260;Name=Msa0269260-mRNA-1;_AED=0.05;_eAED=0.05;_QI=213|1|1|1|1|1|4|859|451 |
| chr2_2 | exon | 70700054 | 70701569 | 70700054 | ID=Msa0269260-mRNA-1:exon:22785;Parent=Msa0269260-mRNA-1 |
| chr2_2 | exon | 70701732 | 70702102 | 70701732 | ID=Msa0269260-mRNA-1:exon:22784;Parent=Msa0269260-mRNA-1 |
| chr2_2 | exon | 70702206 | 70702440 | 70702206 | ID=Msa0269260-mRNA-1:exon:22783;Parent=Msa0269260-mRNA-1 |
| chr2_2 | exon | 70702561 | 70702866 | 70702561 | ID=Msa0269260-mRNA-1:exon:22782;Parent=Msa0269260-mRNA-1 |
| chr2_2 | five_prime_UTR | 70702654 | 70702866 | 70702654 | ID=Msa0269260-mRNA-1:five_prime_utr;Parent=Msa0269260-mRNA-1 |
| chr2_2 | CDS | 70702561 | 70702653 | 70702561 | ID=Msa0269260-mRNA-1:cds;Parent=Msa0269260-mRNA-1 |
| chr2_2 | CDS | 70702206 | 70702440 | 70702206 | ID=Msa0269260-mRNA-1:cds;Parent=Msa0269260-mRNA-1 |
| chr2_2 | CDS | 70701732 | 70702102 | 70701732 | ID=Msa0269260-mRNA-1:cds;Parent=Msa0269260-mRNA-1 |
| chr2_2 | CDS | 70700913 | 70701569 | 70700913 | ID=Msa0269260-mRNA-1:cds;Parent=Msa0269260-mRNA-1 |
| chr2_2 | three_prime_UTR | 70700054 | 70700912 | 70700054 | ID=Msa0269260-mRNA-1:three_prime_utr;Parent=Msa0269260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
