AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1041160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1041160 MtrunA17_Chr7g0269861 98.606 574 5 1 1 571 1 574 0.0 1158
Msa1041160 MtrunA17_Chr1g0194851 69.815 593 157 6 1 571 1 593 0.0 796
Msa1041160 MtrunA17_Chr3g0134181 52.439 492 195 7 2 478 5 472 3.22e-165 479
Msa1041160 MtrunA17_Chr1g0164711 68.702 131 41 0 308 438 60 190 7.85e-59 194
Msa1041160 MtrunA17_Chr4g0038931 23.991 446 254 10 24 463 657 1023 2.93e-20 95.5
Msa1041160 MtrunA17_Chr7g0257081 26.891 238 153 6 233 463 926 1149 1.79e-19 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1041160 AT4G02100.1 63.668 567 173 8 12 571 6 546 0.0 696
Msa1041160 AT2G47440.1 65.597 561 148 8 12 571 10 526 0.0 682
Msa1041160 AT2G47440.2 65.336 551 146 8 22 571 9 515 0.0 661
Msa1041160 AT3G62570.1 58.115 573 215 8 3 571 1 552 0.0 630
Msa1041160 AT1G02650.1 54.827 549 207 7 16 564 6 513 0.0 555
Msa1041160 AT1G02650.2 54.713 541 204 7 24 564 11 510 0.0 543
Msa1041160 AT5G12430.1 27.636 275 172 6 228 490 867 1126 1.60e-22 103
Msa1041160 AT2G41520.1 22.297 444 254 9 46 481 706 1066 7.23e-17 85.1
Msa1041160 AT2G41520.3 22.297 444 254 9 46 481 606 966 8.53e-17 84.7
Msa1041160 AT2G41520.2 27.273 209 130 5 281 481 841 1035 2.82e-12 70.5

Find 142 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTGGTGGGTTGTTGGTTT+GGG 0.142222 7_1:+78689275 None:intergenic
GAAATTTAAAGAGGATTTAA+TGG 0.206952 7_1:+78687936 None:intergenic
ATGAAATTTGTAGCTTTATC+TGG 0.219434 7_1:+78688641 None:intergenic
CAACATCTTTGAATCTTCTT+AGG 0.226823 7_1:+78690625 None:intergenic
GGTGAAGCATGCTGCCATTT+AGG 0.252385 7_1:-78689427 Msa1041160:CDS
GGTGTGGTGGGTTGTTGGTT+TGG 0.252636 7_1:+78689274 None:intergenic
TTGTAGCTTTATCTGGCTTA+TGG 0.271225 7_1:+78688648 None:intergenic
TTCATTGTTGTTGTATAGAT+TGG 0.327452 7_1:-78688555 Msa1041160:CDS
TAGTATTGAGACACTACTTT+TGG 0.327760 7_1:-78687978 Msa1041160:three_prime_UTR
TTTCAATTCTTGAATCTTAG+TGG 0.334226 7_1:+78688784 None:intergenic
TTCTTGAATCTTAGTGGTTA+AGG 0.343497 7_1:+78688790 None:intergenic
TTGATCCAAACGCGGTGATA+TGG 0.349593 7_1:+78690680 None:intergenic
CATCCTCCATCAGTCCTAAA+TGG 0.364318 7_1:+78689413 None:intergenic
GTGGCGGTGTGGTGGGTTGT+TGG 0.365856 7_1:+78689269 None:intergenic
TGGGTGTTCCCGTTCTGAAT+TGG 0.369585 7_1:-78688699 Msa1041160:CDS
GAATTGCTAGCGCAGCATTC+CGG 0.370872 7_1:-78689363 Msa1041160:CDS
TGTGTGCAGATACTTGGTTT+TGG 0.377172 7_1:-78689449 Msa1041160:intron
CAAGTGCTTGAATGCAGGTT+GGG 0.381214 7_1:+78688981 None:intergenic
AATGTAATCTTGAAGCATAT+TGG 0.389327 7_1:+78690602 None:intergenic
AGGGGCTCGTGGCGGTGTGG+TGG 0.390479 7_1:+78689261 None:intergenic
TCATTCGCCATTCTCAAACT+TGG 0.391758 7_1:+78690579 None:intergenic
AATGAATTGAATATGATTAA+CGG 0.397159 7_1:-78687894 Msa1041160:three_prime_UTR
TCTAAATCGTGAAGTGAATC+AGG 0.407704 7_1:+78688920 None:intergenic
GTTGATTACTATGCATTGAT+TGG 0.409360 7_1:-78688731 Msa1041160:CDS
TTGTACAAACAAAATGCAAA+TGG 0.415319 7_1:-78688102 Msa1041160:three_prime_UTR
TTTAGCCATATCACCGCGTT+TGG 0.415618 7_1:-78690685 Msa1041160:CDS
AGGAACAAGAAAGAGAGAAC+AGG 0.420946 7_1:+78691228 None:intergenic
CAGCTGCACGACGGCGGAGG+AGG 0.424219 7_1:+78689191 None:intergenic
TGATCTTAAGAAGAAGGTTA+TGG 0.427625 7_1:-78690439 Msa1041160:CDS
TGCTTCGAAGAGTGAAGCTC+TGG 0.428658 7_1:+78688955 None:intergenic
GGGGCTCGTGGCGGTGTGGT+GGG 0.431108 7_1:+78689262 None:intergenic
CACTTTCTGTTTCGTTGAGA+GGG 0.431292 7_1:+78689242 None:intergenic
TTTGGGGTGTCTCCAGCCAA+TGG 0.436063 7_1:+78689292 None:intergenic
GTGAATCCTGCGGTGTTTCA+AGG 0.438883 7_1:-78688311 Msa1041160:CDS
TTACGTGATCGTAAACTTCC+CGG 0.441406 7_1:-78688869 Msa1041160:CDS
TTACATTCCAAGTTTGAGAA+TGG 0.442091 7_1:-78690586 Msa1041160:CDS
ATTGGTGGGAAGGGCTATGT+TGG 0.443070 7_1:-78688178 Msa1041160:three_prime_UTR
TGTTTCTGATCTTAAGAAGA+AGG 0.445367 7_1:-78690445 Msa1041160:CDS
AGCTCTTTCCAATTCAGAAC+GGG 0.445368 7_1:+78688691 None:intergenic
GTGGCGTTTCCATGCTGGAC+CGG 0.445828 7_1:+78688850 None:intergenic
TGTGGTGGGTTGTTGGTTTG+GGG 0.447654 7_1:+78689276 None:intergenic
TTGAAACAAAGATTATCTTC+TGG 0.452233 7_1:-78688767 Msa1041160:CDS
AGAGATGATGAATATATAAG+AGG 0.454139 7_1:+78691205 None:intergenic
GGCTATGTTGGAGATGTTAC+CGG 0.454733 7_1:-78688166 Msa1041160:three_prime_UTR
TCCTCTATTAACTATCCCAT+TGG 0.455666 7_1:-78689308 Msa1041160:CDS
ACATTGTGGCGTTTCCATGC+TGG 0.457036 7_1:+78688845 None:intergenic
TGATTGTGTGTGCAGATACT+TGG 0.457505 7_1:-78689455 Msa1041160:intron
GCAATGGTTCTTCTCCAAAC+AGG 0.463178 7_1:-78689391 Msa1041160:CDS
ACTCGGCGAGGAAGCCTTGT+GGG 0.463578 7_1:+78689089 None:intergenic
GCTTCATACTTCACCGGCAT+TGG 0.464103 7_1:+78688227 None:intergenic
GGATTTAATGGAAGGGTTGA+AGG 0.464436 7_1:+78687948 None:intergenic
ATAGCATATGAAATTTAAAG+AGG 0.468313 7_1:+78687927 None:intergenic
GGTTTCAAGTGCTTGAATGC+AGG 0.468380 7_1:+78688976 None:intergenic
CATTGAAAGGTGTGAATTTG+CGG 0.473244 7_1:-78688621 Msa1041160:CDS
ACGATTTAATCGACCAATGC+CGG 0.474881 7_1:-78688240 Msa1041160:CDS
TTTAAAGAGGATTTAATGGA+AGG 0.475506 7_1:+78687940 None:intergenic
GTAAAAGTTGTGAGAAAGAA+GGG 0.487805 7_1:-78690407 Msa1041160:CDS
TCAAGTGCTTGAATGCAGGT+TGG 0.488120 7_1:+78688980 None:intergenic
GCATCTGCACACCGTTCTGC+TGG 0.492922 7_1:-78689052 Msa1041160:CDS
TTGGGGTGTCTCCAGCCAAT+GGG 0.495456 7_1:+78689293 None:intergenic
TTACCGGCAGAGGGAATCTC+TGG 0.496591 7_1:-78688150 Msa1041160:three_prime_UTR
ACGTGATATTGATACTGTTA+AGG 0.496784 7_1:-78688594 Msa1041160:CDS
AAGCTACAAATTTCATTGAA+AGG 0.497204 7_1:-78688634 Msa1041160:CDS
TGTAAAAGTTGTGAGAAAGA+AGG 0.497562 7_1:-78690408 Msa1041160:CDS
GCTTCTTTCATCTGATTCAC+CGG 0.497678 7_1:-78690496 Msa1041160:CDS
ACACTTTCTGTTTCGTTGAG+AGG 0.500008 7_1:+78689241 None:intergenic
TTGAAACACCGCAGGATTCA+CGG 0.502686 7_1:+78688313 None:intergenic
AGAAGAGAAAGAAGAAAACC+AGG 0.506340 7_1:-78691119 Msa1041160:five_prime_UTR
TGGCGTTTCCATGCTGGACC+GGG 0.508257 7_1:+78688851 None:intergenic
GCACTCGCTGCCCTCGACGC+TGG 0.509640 7_1:-78689169 Msa1041160:CDS
GTGCAGCTGCACGACGGCGG+AGG 0.510527 7_1:+78689188 None:intergenic
GTTGTATAGATTGGTTCAGA+AGG 0.512610 7_1:-78688546 Msa1041160:CDS
CTATTAACTATCCCATTGGC+TGG 0.515604 7_1:-78689304 Msa1041160:CDS
GCGAATGAAGATCCTTCCTC+TGG 0.518376 7_1:-78690564 Msa1041160:CDS
TCTGATAGTTCTTCTAGAGA+AGG 0.518715 7_1:-78690525 Msa1041160:CDS
TGAGTAGAGACCAGCGTCGA+GGG 0.518981 7_1:+78689159 None:intergenic
GCCAATGGGATAGTTAATAG+AGG 0.519008 7_1:+78689307 None:intergenic
GTAAGATACAGAGAGATTCC+AGG 0.519030 7_1:-78688824 Msa1041160:CDS
TGTACAAACAAAATGCAAAT+GGG 0.519485 7_1:-78688101 Msa1041160:three_prime_UTR
TTAAAGCTCTGATCTCGAAC+CGG 0.521070 7_1:+78690477 None:intergenic
ACCAGCAGACACTCTCTCTC+CGG 0.522583 7_1:+78689344 None:intergenic
GTTGGAGATGTTACCGGCAG+AGG 0.522651 7_1:-78688160 Msa1041160:three_prime_UTR
CTCAATGCTTCATACTTCAC+CGG 0.529803 7_1:+78688221 None:intergenic
CTTAAGAAGAAGGTTATGGC+AGG 0.531276 7_1:-78690435 Msa1041160:CDS
GTGAGAAAGAAGGGCAATGG+AGG 0.534292 7_1:-78690398 Msa1041160:intron
TTGTATAGATTGGTTCAGAA+GGG 0.541753 7_1:-78688545 Msa1041160:CDS
GATTTAATGGAAGGGTTGAA+GGG 0.550646 7_1:+78687949 None:intergenic
TTAAAGAGGATTTAATGGAA+GGG 0.554856 7_1:+78687941 None:intergenic
GAACCAGAGATTCCCTCTGC+CGG 0.556807 7_1:+78688147 None:intergenic
GAAGAAGAAGAACCAGAGGA+AGG 0.559166 7_1:+78690552 None:intergenic
CACTCGGCGAGGAAGCCTTG+TGG 0.560936 7_1:+78689088 None:intergenic
TTGGAGATGTTACCGGCAGA+GGG 0.561440 7_1:-78688159 Msa1041160:three_prime_UTR
GTTGTGAGAAAGAAGGGCAA+TGG 0.562233 7_1:-78690401 Msa1041160:CDS
ATGCTGCCATTTAGGACTGA+TGG 0.563097 7_1:-78689419 Msa1041160:CDS
AGGACTGATGGAGGATGCAA+TGG 0.565558 7_1:-78689407 Msa1041160:CDS
GGAGGAATTTGATGTGGCTG+AGG 0.569430 7_1:+78689209 None:intergenic
GGTCGCCGTGCTGCCCCACA+AGG 0.573594 7_1:-78689103 Msa1041160:CDS
GATGATGAATATATAAGAGG+AGG 0.580874 7_1:+78691208 None:intergenic
GGAAGCCTTGTGGGGCAGCA+CGG 0.584047 7_1:+78689098 None:intergenic
TACAAGAAGATATCAAAGGC+TGG 0.584462 7_1:+78688336 None:intergenic
TCCGGAGAGAGAGTGTCTGC+TGG 0.585361 7_1:-78689345 Msa1041160:CDS
AGGAAGCTGCTGAGAAACAA+AGG 0.590239 7_1:-78688490 Msa1041160:CDS
TGCCGTGATCTTGCAGTGGT+AGG 0.595602 7_1:-78688281 Msa1041160:CDS
GGAATTTGATGTGGCTGAGG+AGG 0.595613 7_1:+78689212 None:intergenic
CGAGAAGATTCAAAGCTGAA+AGG 0.596568 7_1:+78690715 None:intergenic
TGCTCTGTGCATGTAGCACT+CGG 0.598080 7_1:+78689072 None:intergenic
CCGCTACAGAAAAGAAACAT+TGG 0.598730 7_1:-78691046 Msa1041160:CDS
ACTTTCTGTTTCGTTGAGAG+GGG 0.600446 7_1:+78689243 None:intergenic
TTCCTACCACTGCAAGATCA+CGG 0.604484 7_1:+78688279 None:intergenic
GAGCTCTTTCCAATTCAGAA+CGG 0.612218 7_1:+78688690 None:intergenic
CTACAGAAAAGAAACATTGG+TGG 0.614005 7_1:-78691043 Msa1041160:CDS
GAGAGGGGCTCGTGGCGGTG+TGG 0.615235 7_1:+78689258 None:intergenic
AAGCTCTTGAGCTTAGAGCT+AGG 0.620753 7_1:-78690659 Msa1041160:CDS
CTCGGCGAGGAAGCCTTGTG+GGG 0.621473 7_1:+78689090 None:intergenic
AACACACCTTGAAACACCGC+AGG 0.621979 7_1:+78688305 None:intergenic
GGTAGGAAGCTTGTTGACGC+AGG 0.625122 7_1:-78688264 Msa1041160:CDS
AGTGCGGTTACAATCAGCGA+TGG 0.629036 7_1:+78689015 None:intergenic
TATAAGATATGAGAAACGAA+AGG 0.631020 7_1:+78691303 None:intergenic
TTGGTGGCTCACAAACCGTA+AGG 0.631059 7_1:-78691027 Msa1041160:intron
AAGATATGAGAAACGAAAGG+AGG 0.631416 7_1:+78691306 None:intergenic
GGAACAAGAAAGAGAGAACA+GGG 0.633247 7_1:+78691229 None:intergenic
TTAAGAAGAAGGTTATGGCA+GGG 0.636621 7_1:-78690434 Msa1041160:CDS
GAAGAGAAAGAAGAAAACCA+GGG 0.641669 7_1:-78691118 Msa1041160:five_prime_UTR
ACGGTACAAGAAGATATCAA+AGG 0.644354 7_1:+78688332 None:intergenic
GTAAACTTCCCGGTCCAGCA+TGG 0.644733 7_1:-78688859 Msa1041160:CDS
CAGCGAGTGCAGCTGCACGA+CGG 0.645174 7_1:+78689182 None:intergenic
TCTCTCTGTATCTTACATTG+TGG 0.650016 7_1:+78688831 None:intergenic
GGCGGAGGAGGAATTTGATG+TGG 0.651030 7_1:+78689203 None:intergenic
TTCTTGTACCGTGAATCCTG+CGG 0.652851 7_1:-78688321 Msa1041160:CDS
TGCATAGTAATCAACACTAG+TGG 0.653769 7_1:+78688739 None:intergenic
GCATTGATTGGAGTTCGACG+TGG 0.654550 7_1:-78688719 Msa1041160:CDS
CTGAGTAGAGACCAGCGTCG+AGG 0.660918 7_1:+78689158 None:intergenic
TAATAGAGGAAAACTGTCGT+CGG 0.664622 7_1:+78689321 None:intergenic
CTGCAATTCGACCAGCAGAA+CGG 0.668383 7_1:+78689041 None:intergenic
CATTGATTGGAGTTCGACGT+GGG 0.672757 7_1:-78688718 Msa1041160:CDS
CGAGTGCAGCTGCACGACGG+CGG 0.675639 7_1:+78689185 None:intergenic
TCGTTGAGAGGGGCTCGTGG+CGG 0.683214 7_1:+78689253 None:intergenic
CTGCCATTTAGGACTGATGG+AGG 0.697675 7_1:-78689416 Msa1041160:CDS
AAATTCACAGAACAAAATGG+CGG 0.723594 7_1:-78691087 Msa1041160:exon
TTGGGTCTAGTGAAAGAGTG+CGG 0.726603 7_1:+78688999 None:intergenic
TGTGCATGTAGCACTCGGCG+AGG 0.731603 7_1:+78689077 None:intergenic
TCAAGAGCTTGATCCAAACG+CGG 0.749008 7_1:+78690672 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAATATAAGATATAAAAAA+AGG + chr7_1:78691151-78691170 None:intergenic 10.0%
!! AAAAAAAAACATCATTAACT+AGG + chr7_1:78688223-78688242 None:intergenic 15.0%
!! AACTATTATTATGCAAAATT+CGG + chr7_1:78689567-78689586 None:intergenic 15.0%
!! TAAGATATAAAAAAAGGAAA+AGG + chr7_1:78691145-78691164 None:intergenic 15.0%
!! AATGAATTGAATATGATTAA+CGG - chr7_1:78691292-78691311 Msa1041160:five_prime_UTR 15.0%
!!! TAATAATTTTTTGCTTCTAA+TGG - chr7_1:78691315-78691334 Msa1041160:five_prime_UTR 15.0%
!! AAAAAATTCACAGAACAAAA+TGG - chr7_1:78688096-78688115 Msa1041160:three_prime_UTR 20.0%
!! AAACACAAAACATTAACAAA+AGG + chr7_1:78688372-78688391 None:intergenic 20.0%
!!! ATTTGGAAGTTTTTTAGTAA+GGG - chr7_1:78688908-78688927 Msa1041160:CDS 20.0%
!!! AAAGACTATTTTTGATTGTA+TGG - chr7_1:78689509-78689528 Msa1041160:intron 20.0%
!! TAATAATAGTTTCACTGAAA+TGG - chr7_1:78689576-78689595 Msa1041160:intron 20.0%
!!! TCAATTTGATTGATTTTTGT+GGG + chr7_1:78689632-78689651 None:intergenic 20.0%
!!! TTCAATTTGATTGATTTTTG+TGG + chr7_1:78689633-78689652 None:intergenic 20.0%
!! ACACACAATCAAAATTATTT+AGG + chr7_1:78689722-78689741 None:intergenic 20.0%
!! GAAATTTAAAGAGGATTTAA+TGG + chr7_1:78691253-78691272 None:intergenic 20.0%
!! ATAGCATATGAAATTTAAAG+AGG + chr7_1:78691262-78691281 None:intergenic 20.0%
! TATAAGATATGAGAAACGAA+AGG + chr7_1:78687886-78687905 None:intergenic 25.0%
! AGAGATGATGAATATATAAG+AGG + chr7_1:78687984-78688003 None:intergenic 25.0%
!!! TCTTGTTTTGATTTGATTAG+AGG - chr7_1:78688038-78688057 Msa1041160:three_prime_UTR 25.0%
! ACTAGAAACAACTATAAACT+TGG + chr7_1:78688321-78688340 None:intergenic 25.0%
! AATGTAATCTTGAAGCATAT+TGG + chr7_1:78688587-78688606 None:intergenic 25.0%
!!! CATTTGGAAGTTTTTTAGTA+AGG - chr7_1:78688907-78688926 Msa1041160:CDS 25.0%
!! TCATTTCATTTTCTTCAATG+TGG - chr7_1:78688935-78688954 Msa1041160:CDS 25.0%
!! ATTTGTTACTCTTTCTATAC+AGG - chr7_1:78689045-78689064 Msa1041160:CDS 25.0%
! TTATTAACCTTTGTGATTGA+CGG + chr7_1:78689256-78689275 None:intergenic 25.0%
! AAGGTTAATAATTGTTACCT+AGG - chr7_1:78689265-78689284 Msa1041160:CDS 25.0%
! AGGTTAATAATTGTTACCTA+GGG - chr7_1:78689266-78689285 Msa1041160:CDS 25.0%
!! TCAAATTGAATGTTTTTCCT+TGG - chr7_1:78689643-78689662 Msa1041160:intron 25.0%
!!! GTTTTTTTGTTGTCGTTAAA+TGG - chr7_1:78689672-78689691 Msa1041160:intron 25.0%
! CATTTCTCAAAAATAGTAGA+CGG - chr7_1:78690062-78690081 Msa1041160:intron 25.0%
! TTTCAATTCTTGAATCTTAG+TGG + chr7_1:78690405-78690424 None:intergenic 25.0%
! TTGAAACAAAGATTATCTTC+TGG - chr7_1:78690419-78690438 Msa1041160:CDS 25.0%
!!! ATGAAATTTGTAGCTTTATC+TGG + chr7_1:78690548-78690567 None:intergenic 25.0%
! AAGCTACAAATTTCATTGAA+AGG - chr7_1:78690552-78690571 Msa1041160:CDS 25.0%
!! TTCATTGTTGTTGTATAGAT+TGG - chr7_1:78690631-78690650 Msa1041160:CDS 25.0%
!!! TAAGAGTAGTAATGTTTTTG+TGG - chr7_1:78690820-78690839 Msa1041160:intron 25.0%
!!! GCTAAGTTTTGATGAAAAAT+TGG - chr7_1:78690990-78691009 Msa1041160:intron 25.0%
!!! AAGTTTTGATGAAAAATTGG+TGG - chr7_1:78690993-78691012 Msa1041160:intron 25.0%
!!! AGTTTTGATGAAAAATTGGT+GGG - chr7_1:78690994-78691013 Msa1041160:intron 25.0%
! TTGTACAAACAAAATGCAAA+TGG - chr7_1:78691084-78691103 Msa1041160:exon 25.0%
! TGTACAAACAAAATGCAAAT+GGG - chr7_1:78691085-78691104 Msa1041160:exon 25.0%
! TTAAAGAGGATTTAATGGAA+GGG + chr7_1:78691248-78691267 None:intergenic 25.0%
! TTTAAAGAGGATTTAATGGA+AGG + chr7_1:78691249-78691268 None:intergenic 25.0%
GATGATGAATATATAAGAGG+AGG + chr7_1:78687981-78688000 None:intergenic 30.0%
!!! TGTGAATTTTTTTCAAACCC+TGG + chr7_1:78688088-78688107 None:intergenic 30.0%
AAATTCACAGAACAAAATGG+CGG - chr7_1:78688099-78688118 Msa1041160:three_prime_UTR 30.0%
TGTGTGAAAATGTTACCTTA+CGG + chr7_1:78688177-78688196 None:intergenic 30.0%
!!! TTTTGTTTTGTTGCAGATTG+TGG - chr7_1:78688393-78688412 Msa1041160:CDS 30.0%
CAACATCTTTGAATCTTCTT+AGG + chr7_1:78688564-78688583 None:intergenic 30.0%
TTACATTCCAAGTTTGAGAA+TGG - chr7_1:78688600-78688619 Msa1041160:CDS 30.0%
! TGTTTCTGATCTTAAGAAGA+AGG - chr7_1:78688741-78688760 Msa1041160:CDS 30.0%
TGATCTTAAGAAGAAGGTTA+TGG - chr7_1:78688747-78688766 Msa1041160:CDS 30.0%
TGTAAAAGTTGTGAGAAAGA+AGG - chr7_1:78688778-78688797 Msa1041160:CDS 30.0%
GTAAAAGTTGTGAGAAAGAA+GGG - chr7_1:78688779-78688798 Msa1041160:CDS 30.0%
! TTTGAAATCTGTCTCTCATT+TGG - chr7_1:78688891-78688910 Msa1041160:CDS 30.0%
TTCAATGCACGATAAAAAGT+TGG - chr7_1:78689158-78689177 Msa1041160:CDS 30.0%
CTTTCATCTTCTATTGTCAA+TGG - chr7_1:78689403-78689422 Msa1041160:CDS 30.0%
AACAAAAAAACCATTCACCA+AGG + chr7_1:78689663-78689682 None:intergenic 30.0%
! TAGCAATTCTTTTTCCTGTT+TGG + chr7_1:78689812-78689831 None:intergenic 30.0%
!! TATTTTTGAGAAATGGCGAA+TGG + chr7_1:78690057-78690076 None:intergenic 30.0%
!!! CGTCTACTATTTTTGAGAAA+TGG + chr7_1:78690064-78690083 None:intergenic 30.0%
TTCTTGAATCTTAGTGGTTA+AGG + chr7_1:78690399-78690418 None:intergenic 30.0%
! GTTGATTACTATGCATTGAT+TGG - chr7_1:78690455-78690474 Msa1041160:CDS 30.0%
ACGTGATATTGATACTGTTA+AGG - chr7_1:78690592-78690611 Msa1041160:CDS 30.0%
! TTGTATAGATTGGTTCAGAA+GGG - chr7_1:78690641-78690660 Msa1041160:CDS 30.0%
!! GATGAGTAATGTTTTAGATG+AGG - chr7_1:78690676-78690695 Msa1041160:CDS 30.0%
GTAAAAAAAGTTTAGACTGC+CGG - chr7_1:78691107-78691126 Msa1041160:five_prime_UTR 30.0%
! GAAAAGGTGACAAAATTTTC+CGG + chr7_1:78691129-78691148 None:intergenic 30.0%
!! TAGTATTGAGACACTACTTT+TGG - chr7_1:78691208-78691227 Msa1041160:five_prime_UTR 30.0%
AAGATATGAGAAACGAAAGG+AGG + chr7_1:78687883-78687902 None:intergenic 35.0%
!!! AGAGAGAGAATTTTTGGTCA+GGG + chr7_1:78687912-78687931 None:intergenic 35.0%
AGAAGAGAAAGAAGAAAACC+AGG - chr7_1:78688067-78688086 Msa1041160:three_prime_UTR 35.0%
GAAGAGAAAGAAGAAAACCA+GGG - chr7_1:78688068-78688087 Msa1041160:three_prime_UTR 35.0%
! CCAATGTTTCTTTTCTGTAG+CGG + chr7_1:78688143-78688162 None:intergenic 35.0%
CTACAGAAAAGAAACATTGG+TGG - chr7_1:78688143-78688162 Msa1041160:three_prime_UTR 35.0%
! TCTGATAGTTCTTCTAGAGA+AGG - chr7_1:78688661-78688680 Msa1041160:CDS 35.0%
TTAAGAAGAAGGTTATGGCA+GGG - chr7_1:78688752-78688771 Msa1041160:CDS 35.0%
TTTCTTCAATGTGGAGTTTC+TGG - chr7_1:78688944-78688963 Msa1041160:CDS 35.0%
CAATCTGATCTCACACAAAT+AGG + chr7_1:78689015-78689034 None:intergenic 35.0%
AATTATTCACATGTGCACTG+AGG - chr7_1:78689219-78689238 Msa1041160:CDS 35.0%
! CTTTTTACCGTCAATCACAA+AGG - chr7_1:78689246-78689265 Msa1041160:CDS 35.0%
TTGTTACCTAGGGAAATTCT+TGG - chr7_1:78689276-78689295 Msa1041160:CDS 35.0%
TAGGGAAATTCTTGGTTGTA+GGG - chr7_1:78689284-78689303 Msa1041160:CDS 35.0%
GAGACAATGCATTGTAGAAA+TGG + chr7_1:78689384-78689403 None:intergenic 35.0%
GAGATAATGCATTCTTGAAG+TGG - chr7_1:78689435-78689454 Msa1041160:CDS 35.0%
! GAATGTTTTTCCTTGGTGAA+TGG - chr7_1:78689650-78689669 Msa1041160:intron 35.0%
TAATAGAGGAAAACTGTCGT+CGG + chr7_1:78689868-78689887 None:intergenic 35.0%
TCCTCTATTAACTATCCCAT+TGG - chr7_1:78689878-78689897 Msa1041160:intron 35.0%
TCTAAATCGTGAAGTGAATC+AGG + chr7_1:78690269-78690288 None:intergenic 35.0%
TCTCTCTGTATCTTACATTG+TGG + chr7_1:78690358-78690377 None:intergenic 35.0%
TGCATAGTAATCAACACTAG+TGG + chr7_1:78690450-78690469 None:intergenic 35.0%
!! TTGTAGCTTTATCTGGCTTA+TGG + chr7_1:78690541-78690560 None:intergenic 35.0%
! CATTGAAAGGTGTGAATTTG+CGG - chr7_1:78690565-78690584 Msa1041160:CDS 35.0%
! GTTGTATAGATTGGTTCAGA+AGG - chr7_1:78690640-78690659 Msa1041160:CDS 35.0%
AGCTGAGCTGAAAAATAACA+AGG - chr7_1:78690790-78690809 Msa1041160:intron 35.0%
TACAAGAAGATATCAAAGGC+TGG + chr7_1:78690853-78690872 None:intergenic 35.0%
ACGGTACAAGAAGATATCAA+AGG + chr7_1:78690857-78690876 None:intergenic 35.0%
TTGATGAAAAATTGGTGGGA+AGG - chr7_1:78690998-78691017 Msa1041160:intron 35.0%
TGATGAAAAATTGGTGGGAA+GGG - chr7_1:78690999-78691018 Msa1041160:intron 35.0%
GATTTAATGGAAGGGTTGAA+GGG + chr7_1:78691240-78691259 None:intergenic 35.0%
!!! GAGAGAGAGAATTTTTGGTC+AGG + chr7_1:78687913-78687932 None:intergenic 40.0%
! GAGAGGAGAGAGAGAATTTT+TGG + chr7_1:78687918-78687937 None:intergenic 40.0%
GGAACAAGAAAGAGAGAACA+GGG + chr7_1:78687960-78687979 None:intergenic 40.0%
AGGAACAAGAAAGAGAGAAC+AGG + chr7_1:78687961-78687980 None:intergenic 40.0%
CCGCTACAGAAAAGAAACAT+TGG - chr7_1:78688140-78688159 Msa1041160:three_prime_UTR 40.0%
! GAATCGGAAGACAGCATTTT+CGG - chr7_1:78688289-78688308 Msa1041160:CDS 40.0%
CGAGAAGATTCAAAGCTGAA+AGG + chr7_1:78688474-78688493 None:intergenic 40.0%
TCATTCGCCATTCTCAAACT+TGG + chr7_1:78688610-78688629 None:intergenic 40.0%
AGAAGAAGAAGAAGAACCAG+AGG + chr7_1:78688641-78688660 None:intergenic 40.0%
GCTTCTTTCATCTGATTCAC+CGG - chr7_1:78688690-78688709 Msa1041160:CDS 40.0%
! TTAAAGCTCTGATCTCGAAC+CGG + chr7_1:78688712-78688731 None:intergenic 40.0%
CTTAAGAAGAAGGTTATGGC+AGG - chr7_1:78688751-78688770 Msa1041160:CDS 40.0%
CTACAACCAAGAATTTCCCT+AGG + chr7_1:78689285-78689304 None:intergenic 40.0%
CTAGGGAAATTCTTGGTTGT+AGG - chr7_1:78689283-78689302 Msa1041160:CDS 40.0%
TGGACAATGTTTGAGAACCA+TGG - chr7_1:78689307-78689326 Msa1041160:CDS 40.0%
TGTGAGACTCTATGATACCA+TGG + chr7_1:78689327-78689346 None:intergenic 40.0%
TCATCCCTTATTACCTCTTC+TGG + chr7_1:78689461-78689480 None:intergenic 40.0%
TTCGGCAAAGATCAGTATCA+TGG + chr7_1:78689549-78689568 None:intergenic 40.0%
TGATTGTGTGTGCAGATACT+TGG - chr7_1:78689731-78689750 Msa1041160:intron 40.0%
! TGTGTGCAGATACTTGGTTT+TGG - chr7_1:78689737-78689756 Msa1041160:intron 40.0%
!! GTGTGCAGATACTTGGTTTT+GGG - chr7_1:78689738-78689757 Msa1041160:intron 40.0%
GCCAATGGGATAGTTAATAG+AGG + chr7_1:78689882-78689901 None:intergenic 40.0%
CTATTAACTATCCCATTGGC+TGG - chr7_1:78689882-78689901 Msa1041160:intron 40.0%
ACTTTCTGTTTCGTTGAGAG+GGG + chr7_1:78689946-78689965 None:intergenic 40.0%
CACTTTCTGTTTCGTTGAGA+GGG + chr7_1:78689947-78689966 None:intergenic 40.0%
ACACTTTCTGTTTCGTTGAG+AGG + chr7_1:78689948-78689967 None:intergenic 40.0%
TTACGTGATCGTAAACTTCC+CGG - chr7_1:78690317-78690336 Msa1041160:intron 40.0%
GTAAGATACAGAGAGATTCC+AGG - chr7_1:78690362-78690381 Msa1041160:intron 40.0%
! GTTAAGGCACAAAGTTTTCC+TGG + chr7_1:78690383-78690402 None:intergenic 40.0%
AGCTCTTTCCAATTCAGAAC+GGG + chr7_1:78690498-78690517 None:intergenic 40.0%
GAGCTCTTTCCAATTCAGAA+CGG + chr7_1:78690499-78690518 None:intergenic 40.0%
ACGATTTAATCGACCAATGC+CGG - chr7_1:78690946-78690965 Msa1041160:intron 40.0%
CTCAATGCTTCATACTTCAC+CGG + chr7_1:78690968-78690987 None:intergenic 40.0%
GGATTTAATGGAAGGGTTGA+AGG + chr7_1:78691241-78691260 None:intergenic 40.0%
!! TGTTCTAGAGAGAGAGAGAG+AGG + chr7_1:78687935-78687954 None:intergenic 45.0%
! ATGCTGTCTTCCGATTCGAT+CGG + chr7_1:78688286-78688305 None:intergenic 45.0%
TTTAGCCATATCACCGCGTT+TGG - chr7_1:78688501-78688520 Msa1041160:CDS 45.0%
TTGATCCAAACGCGGTGATA+TGG + chr7_1:78688509-78688528 None:intergenic 45.0%
TCAAGAGCTTGATCCAAACG+CGG + chr7_1:78688517-78688536 None:intergenic 45.0%
AAGCTCTTGAGCTTAGAGCT+AGG - chr7_1:78688527-78688546 Msa1041160:CDS 45.0%
GAAGAAGAAGAACCAGAGGA+AGG + chr7_1:78688637-78688656 None:intergenic 45.0%
GTTGTGAGAAAGAAGGGCAA+TGG - chr7_1:78688785-78688804 Msa1041160:CDS 45.0%
CTACAGCTAGTGAGGCTAAA+TGG - chr7_1:78689090-78689109 Msa1041160:CDS 45.0%
GGAAATTCTTGGTTGTAGGG+TGG - chr7_1:78689287-78689306 Msa1041160:CDS 45.0%
ATTCTTGAAGTGGCCAGAAG+AGG - chr7_1:78689445-78689464 Msa1041160:intron 45.0%
AGTGGCCAGAAGAGGTAATA+AGG - chr7_1:78689453-78689472 Msa1041160:intron 45.0%
GTGGCCAGAAGAGGTAATAA+GGG - chr7_1:78689454-78689473 Msa1041160:intron 45.0%
! ATGCTGCCATTTAGGACTGA+TGG - chr7_1:78689767-78689786 Msa1041160:intron 45.0%
CATCCTCCATCAGTCCTAAA+TGG + chr7_1:78689776-78689795 None:intergenic 45.0%
GCAATGGTTCTTCTCCAAAC+AGG - chr7_1:78689795-78689814 Msa1041160:intron 45.0%
TTGGGTCTAGTGAAAGAGTG+CGG + chr7_1:78690190-78690209 None:intergenic 45.0%
CAAGTGCTTGAATGCAGGTT+GGG + chr7_1:78690208-78690227 None:intergenic 45.0%
TCAAGTGCTTGAATGCAGGT+TGG + chr7_1:78690209-78690228 None:intergenic 45.0%
! GGTTTCAAGTGCTTGAATGC+AGG + chr7_1:78690213-78690232 None:intergenic 45.0%
! CATTGATTGGAGTTCGACGT+GGG - chr7_1:78690468-78690487 Msa1041160:CDS 45.0%
AGGAAGCTGCTGAGAAACAA+AGG - chr7_1:78690696-78690715 Msa1041160:CDS 45.0%
TTCTTGTACCGTGAATCCTG+CGG - chr7_1:78690865-78690884 Msa1041160:intron 45.0%
TTGAAACACCGCAGGATTCA+CGG + chr7_1:78690876-78690895 None:intergenic 45.0%
TTCCTACCACTGCAAGATCA+CGG + chr7_1:78690910-78690929 None:intergenic 45.0%
GGCTATGTTGGAGATGTTAC+CGG - chr7_1:78691020-78691039 Msa1041160:intron 45.0%
! TTGGTGGCTCACAAACCGTA+AGG - chr7_1:78688159-78688178 Msa1041160:three_prime_UTR 50.0%
GTTCCTTGCTCCGATCGAAT+CGG - chr7_1:78688273-78688292 Msa1041160:CDS 50.0%
GCGAATGAAGATCCTTCCTC+TGG - chr7_1:78688622-78688641 Msa1041160:CDS 50.0%
GTGAGAAAGAAGGGCAATGG+AGG - chr7_1:78688788-78688807 Msa1041160:CDS 50.0%
TTAGCCTCACTAGCTGTAGC+TGG + chr7_1:78689089-78689108 None:intergenic 50.0%
! GGTGAAGCATGCTGCCATTT+AGG - chr7_1:78689759-78689778 Msa1041160:intron 50.0%
! CTGCCATTTAGGACTGATGG+AGG - chr7_1:78689770-78689789 Msa1041160:intron 50.0%
AGGACTGATGGAGGATGCAA+TGG - chr7_1:78689779-78689798 Msa1041160:intron 50.0%
GAATTGCTAGCGCAGCATTC+CGG - chr7_1:78689823-78689842 Msa1041160:intron 50.0%
!! TGTGGTGGGTTGTTGGTTTG+GGG + chr7_1:78689913-78689932 None:intergenic 50.0%
!! GTGTGGTGGGTTGTTGGTTT+GGG + chr7_1:78689914-78689933 None:intergenic 50.0%
GGAATTTGATGTGGCTGAGG+AGG + chr7_1:78689977-78689996 None:intergenic 50.0%
GGAGGAATTTGATGTGGCTG+AGG + chr7_1:78689980-78689999 None:intergenic 50.0%
TGCTCTGTGCATGTAGCACT+CGG + chr7_1:78690117-78690136 None:intergenic 50.0%
CTGCAATTCGACCAGCAGAA+CGG + chr7_1:78690148-78690167 None:intergenic 50.0%
AGTGCGGTTACAATCAGCGA+TGG + chr7_1:78690174-78690193 None:intergenic 50.0%
TGCTTCGAAGAGTGAAGCTC+TGG + chr7_1:78690234-78690253 None:intergenic 50.0%
ACATTGTGGCGTTTCCATGC+TGG + chr7_1:78690344-78690363 None:intergenic 50.0%
!! GCATTGATTGGAGTTCGACG+TGG - chr7_1:78690467-78690486 Msa1041160:CDS 50.0%
! TGGGTGTTCCCGTTCTGAAT+TGG - chr7_1:78690487-78690506 Msa1041160:CDS 50.0%
GTGAATCCTGCGGTGTTTCA+AGG - chr7_1:78690875-78690894 Msa1041160:intron 50.0%
AACACACCTTGAAACACCGC+AGG + chr7_1:78690884-78690903 None:intergenic 50.0%
! GTTTTGCCGTGATCTTGCAG+TGG - chr7_1:78690901-78690920 Msa1041160:intron 50.0%
GCTTCATACTTCACCGGCAT+TGG + chr7_1:78690962-78690981 None:intergenic 50.0%
ATTGGTGGGAAGGGCTATGT+TGG - chr7_1:78691008-78691027 Msa1041160:intron 50.0%
TTGGAGATGTTACCGGCAGA+GGG - chr7_1:78691027-78691046 Msa1041160:intron 50.0%
! CTTCCGATTCGATCGGAGCA+AGG + chr7_1:78688279-78688298 None:intergenic 55.0%
CATGCCAGCTACAGCTAGTG+AGG - chr7_1:78689082-78689101 Msa1041160:CDS 55.0%
ACCAGCAGACACTCTCTCTC+CGG + chr7_1:78689845-78689864 None:intergenic 55.0%
! TTGGGGTGTCTCCAGCCAAT+GGG + chr7_1:78689896-78689915 None:intergenic 55.0%
! TTTGGGGTGTCTCCAGCCAA+TGG + chr7_1:78689897-78689916 None:intergenic 55.0%
!! GGTGTGGTGGGTTGTTGGTT+TGG + chr7_1:78689915-78689934 None:intergenic 55.0%
GGCGGAGGAGGAATTTGATG+TGG + chr7_1:78689986-78690005 None:intergenic 55.0%
! TGAGTAGAGACCAGCGTCGA+GGG + chr7_1:78690030-78690049 None:intergenic 55.0%
GTAAACTTCCCGGTCCAGCA+TGG - chr7_1:78690327-78690346 Msa1041160:intron 55.0%
TGCCGTGATCTTGCAGTGGT+AGG - chr7_1:78690905-78690924 Msa1041160:intron 55.0%
!! GGTAGGAAGCTTGTTGACGC+AGG - chr7_1:78690922-78690941 Msa1041160:intron 55.0%
GTTGGAGATGTTACCGGCAG+AGG - chr7_1:78691026-78691045 Msa1041160:intron 55.0%
TTACCGGCAGAGGGAATCTC+TGG - chr7_1:78691036-78691055 Msa1041160:CDS 55.0%
GAACCAGAGATTCCCTCTGC+CGG + chr7_1:78691042-78691061 None:intergenic 55.0%
!! TCCGGAGAGAGAGTGTCTGC+TGG - chr7_1:78689841-78689860 Msa1041160:intron 60.0%
GTTTCGTTGAGAGGGGCTCG+TGG + chr7_1:78689939-78689958 None:intergenic 60.0%
CTGAGTAGAGACCAGCGTCG+AGG + chr7_1:78690031-78690050 None:intergenic 60.0%
! ACTCGGCGAGGAAGCCTTGT+GGG + chr7_1:78690100-78690119 None:intergenic 60.0%
TGTGCATGTAGCACTCGGCG+AGG + chr7_1:78690112-78690131 None:intergenic 60.0%
GCATCTGCACACCGTTCTGC+TGG - chr7_1:78690134-78690153 Msa1041160:intron 60.0%
TGGCGTTTCCATGCTGGACC+GGG + chr7_1:78690338-78690357 None:intergenic 60.0%
GTGGCGTTTCCATGCTGGAC+CGG + chr7_1:78690339-78690358 None:intergenic 60.0%
!! GTGGCGGTGTGGTGGGTTGT+TGG + chr7_1:78689920-78689939 None:intergenic 65.0%
TCGTTGAGAGGGGCTCGTGG+CGG + chr7_1:78689936-78689955 None:intergenic 65.0%
CAGCGAGTGCAGCTGCACGA+CGG + chr7_1:78690007-78690026 None:intergenic 65.0%
! GGAAGCCTTGTGGGGCAGCA+CGG + chr7_1:78690091-78690110 None:intergenic 65.0%
! CTCGGCGAGGAAGCCTTGTG+GGG + chr7_1:78690099-78690118 None:intergenic 65.0%
CACTCGGCGAGGAAGCCTTG+TGG + chr7_1:78690101-78690120 None:intergenic 65.0%
CGAGTGCAGCTGCACGACGG+CGG + chr7_1:78690004-78690023 None:intergenic 70.0%
GGGGCTCGTGGCGGTGTGGT+GGG + chr7_1:78689927-78689946 None:intergenic 75.0%
AGGGGCTCGTGGCGGTGTGG+TGG + chr7_1:78689928-78689947 None:intergenic 75.0%
GAGAGGGGCTCGTGGCGGTG+TGG + chr7_1:78689931-78689950 None:intergenic 75.0%
CAGCTGCACGACGGCGGAGG+AGG + chr7_1:78689998-78690017 None:intergenic 75.0%
GTGCAGCTGCACGACGGCGG+AGG + chr7_1:78690001-78690020 None:intergenic 75.0%
GCACTCGCTGCCCTCGACGC+TGG - chr7_1:78690017-78690036 Msa1041160:intron 75.0%
GGTCGCCGTGCTGCCCCACA+AGG - chr7_1:78690083-78690102 Msa1041160:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 78687868 78691340 78687868 ID=Msa1041160;Name=Msa1041160
chr7_1 mRNA 78687868 78691340 78687868 ID=Msa1041160-mRNA-1;Parent=Msa1041160;Name=Msa1041160-mRNA-1;_AED=0.02;_eAED=0.02;_QI=247|1|1|1|1|1|3|346|571
chr7_1 exon 78687868 78689462 78687868 ID=Msa1041160-mRNA-1:exon:21070;Parent=Msa1041160-mRNA-1
chr7_1 exon 78690399 78690799 78690399 ID=Msa1041160-mRNA-1:exon:21069;Parent=Msa1041160-mRNA-1
chr7_1 exon 78691028 78691340 78691028 ID=Msa1041160-mRNA-1:exon:21068;Parent=Msa1041160-mRNA-1
chr7_1 five_prime_UTR 78691094 78691340 78691094 ID=Msa1041160-mRNA-1:five_prime_utr;Parent=Msa1041160-mRNA-1
chr7_1 CDS 78691028 78691093 78691028 ID=Msa1041160-mRNA-1:cds;Parent=Msa1041160-mRNA-1
chr7_1 CDS 78690399 78690799 78690399 ID=Msa1041160-mRNA-1:cds;Parent=Msa1041160-mRNA-1
chr7_1 CDS 78688214 78689462 78688214 ID=Msa1041160-mRNA-1:cds;Parent=Msa1041160-mRNA-1
chr7_1 three_prime_UTR 78687868 78688213 78687868 ID=Msa1041160-mRNA-1:three_prime_utr;Parent=Msa1041160-mRNA-1
Gene Sequence

>Msa1041160

ATGGCGGTGACAACTCACTCTCTAACCGCTACAGAAAAGAAACATTGGTGGCTCACAAACCGTAAGATTGTGGAGAAATACATAAAAGACGCACGAAGCTTAATAGCAACACAAGAACAGAGCGAGATCCTTTCAGCTTTGAATCTTCTCGACGCAGCTTTAGCCATATCACCGCGTTTGGATCAAGCTCTTGAGCTTAGAGCTAGGTCATTGCTTTGCCTAAGAAGATTCAAAGATGTTGCCAATATGCTTCAAGATTACATTCCAAGTTTGAGAATGGCGAATGAAGATCCTTCCTCTGGTTCTTCTTCTTCTTCTTCTGATAGTTCTTCTAGAGAAGGAGTGAAGCTTCTTTCATCTGATTCACCGGTTCGAGATCAGAGCTTTAAGTGCTTCTCTGTTTCTGATCTTAAGAAGAAGGTTATGGCAGGGCTTTGTAAAAGTTGTGAGAAAGAAGGGCAATGGAGATACTTGGTTTTGGGTGAAGCATGCTGCCATTTAGGACTGATGGAGGATGCAATGGTTCTTCTCCAAACAGGAAAAAGAATTGCTAGCGCAGCATTCCGGAGAGAGAGTGTCTGCTGGTCCGACGACAGTTTTCCTCTATTAACTATCCCATTGGCTGGAGACACCCCAAACCAACAACCCACCACACCGCCACGAGCCCCTCTCAACGAAACAGAAAGTGTAACACACCTCCTCAGCCACATCAAATTCCTCCTCCGCCGTCGTGCAGCTGCACTCGCTGCCCTCGACGCTGGTCTCTACTCAGAAGCCATTCGCCATTTCTCAAAAATAGTAGACGGTCGCCGTGCTGCCCCACAAGGCTTCCTCGCCGAGTGCTACATGCACAGAGCATCTGCACACCGTTCTGCTGGTCGAATTGCAGAGTCCATCGCTGATTGTAACCGCACTCTTTCACTAGACCCAACCTGCATTCAAGCACTTGAAACCAGAGCTTCACTCTTCGAAGCAATTCGTTGTTTACCTGATTCACTTCACGATTTAGAACATTTAAAGCTGCTCTACAACTCTATCTTACGTGATCGTAAACTTCCCGGTCCAGCATGGAAACGCCACAATGTAAGATACAGAGAGATTCCAGGAAAACTTTGTGCCTTAACCACTAAGATTCAAGAATTGAAACAAAGATTATCTTCTGGTGAAACCACTAGTGTTGATTACTATGCATTGATTGGAGTTCGACGTGGGTGTTCCCGTTCTGAATTGGAAAGAGCTCATTTGTTGCTATGTCTTCGCCATAAGCCAGATAAAGCTACAAATTTCATTGAAAGGTGTGAATTTGCGGATGAACGTGATATTGATACTGTTAAGGAGAAAGCAAAGATGTGTTCATTGTTGTTGTATAGATTGGTTCAGAAGGGTTACACAAGTGTGATGAGTAATGTTTTAGATGAGGAAGCTGCTGAGAAACAAAGGAAGAAGAATGTTGCTGCTGCAGCACAAGCACAAGCAGCAGCAATTCAAGTTCAAGTGAAGAAAACAAATGAAGCTGAGCTGAAAAATAACAAGGCTGAAAATAAGAGTAGTAATGTTTTTGTGGAAAATGACCAGCCTTTGATATCTTCTTGTACCGTGAATCCTGCGGTGTTTCAAGGTGTGTTTTGCCGTGATCTTGCAGTGGTAGGAAGCTTGTTGACGCAGGCACGATTTAATCGACCAATGCCGGTGAAGTATGAAGCATTGAGCTGCTAA
Protein sequence

>Msa1041160

MAVTTHSLTATEKKHWWLTNRKIVEKYIKDARSLIATQEQSEILSALNLLDAALAISPRLDQALELRARSLLCLRRFKDVANMLQDYIPSLRMANEDPSSGSSSSSSDSSSREGVKLLSSDSPVRDQSFKCFSVSDLKKKVMAGLCKSCEKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRIASAAFRRESVCWSDDSFPLLTIPLAGDTPNQQPTTPPRAPLNETESVTHLLSHIKFLLRRRAAALAALDAGLYSEAIRHFSKIVDGRRAAPQGFLAECYMHRASAHRSAGRIAESIADCNRTLSLDPTCIQALETRASLFEAIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKQRLSSGETTSVDYYALIGVRRGCSRSELERAHLLLCLRHKPDKATNFIERCEFADERDIDTVKEKAKMCSLLLYRLVQKGYTSVMSNVLDEEAAEKQRKKNVAAAAQAQAAAIQVQVKKTNEAELKNNKAENKSSNVFVENDQPLISSCTVNPAVFQGVFCRDLAVVGSLLTQARFNRPMPVKYEALSC*